CLDN3 28449

Name: CLDN3	Sequence: fasta or formatted (220aa)		NCBI GI: 4502875
Description: claudin 3		Referenced in: Gap Junctions and Tight Junctions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.2 29 4 C cysteine 4.1 9 2 D aspartate 3.2 7 2 E glutamate 2.3 5 1 F phenylalanine 1.8 4 1 G glycine 8.6 19 2 H histidine 0.0 0 0 I isoleucine 5.5 12 2 K lysine 3.6 8 2 L leucine 13.2 29 2 M methionine 2.7 6 1 N asparagine 2.7 6 1 P proline 4.1 9 2 Q glutamine 4.5 10 1 R arginine 3.2 7 1 S serine 5.5 12 1 T threonine 6.4 14 1 V valine 9.5 21 2 W tryptophan 2.7 6 1 Y tyrosine 3.2 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 claudin 3 CLDN4 0.679 claudin 4 CLDN9 0.647 claudin 9 CLDN6 0.588 claudin 6 CLDN5 0.511 claudin 5 CLDN5 0.511 claudin 5 CLDN1 0.451 claudin 1 CLDN7 0.439 claudin 7 CLDN8 0.434 claudin 8 CLDN17 0.420 claudin 17 CLDN14 0.405 claudin 14 CLDN14 0.405 claudin 14 CLDN14 0.405 claudin 14 CLDN14 0.405 claudin 14 CLDN14 0.405 claudin 14 CLDN19 0.400 claudin 19 isoform a CLDN19 0.400 claudin 19 isoform b CLDN2 0.365 claudin 2 CLDN15 0.288 claudin 15 CLDN10 0.273 claudin 10 isoform b CLDN20 0.264 claudin 20 CLDN18 0.249 claudin 18 isoform 1 CLDN10 0.237 claudin 10 isoform a CLDN18 0.233 claudin 18 isoform 2 CLDN24 0.216 PREDICTED: claudin-24-like CLDN24 0.213 PREDICTED: claudin-24-like CLDN24 0.213 PREDICTED: claudin-24-like CLDN22 0.209 claudin 22 CLDN10 0.199 claudin 10 isoform a_i1 LOC644672 0.187 claudin-like Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.