CLDN16 33375

Name: CLDN16	Sequence: fasta or formatted (305aa)		NCBI GI: 5729970
Description: claudin 16		Referenced in: Gap Junctions and Tight Junctions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.2 28 2 C cysteine 5.6 17 2 D aspartate 4.9 15 2 E glutamate 3.0 9 1 F phenylalanine 4.9 15 2 G glycine 7.2 22 1 H histidine 2.0 6 1 I isoleucine 4.3 13 2 K lysine 3.9 12 1 L leucine 11.5 35 3 M methionine 2.3 7 1 N asparagine 1.6 5 1 P proline 3.9 12 1 Q glutamine 2.0 6 2 R arginine 5.2 16 1 S serine 6.2 19 1 T threonine 7.2 22 1 V valine 7.9 24 2 W tryptophan 2.3 7 2 Y tyrosine 4.9 15 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 claudin 16 CLDN7 0.091 claudin 7 CLDN1 0.090 claudin 1 CLDN4 0.077 claudin 4 CLDN15 0.073 claudin 15 CLDN11 0.072 claudin 11 CLDN10 0.065 claudin 10 isoform b CLDN3 0.064 claudin 3 CLDN20 0.064 claudin 20 CLDN19 0.060 claudin 19 isoform b CLDN8 0.060 claudin 8 CLDN9 0.060 claudin 9 CLDN14 0.059 claudin 14 CLDN14 0.059 claudin 14 CLDN14 0.059 claudin 14 CLDN14 0.059 claudin 14 CLDN14 0.059 claudin 14 CLDN24 0.057 PREDICTED: claudin-24-like CLDN24 0.057 PREDICTED: claudin-24-like CLDN18 0.057 claudin 18 isoform 1 CLDN19 0.057 claudin 19 isoform a CLDN6 0.054 claudin 6 CLDN24 0.054 PREDICTED: claudin-24-like CLDN2 0.052 claudin 2 CLDN10 0.051 claudin 10 isoform a CLDN18 0.049 claudin 18 isoform 2 CLDN22 0.047 claudin 22 CLDN10 0.039 claudin 10 isoform a_i1 CLDN12 0.029 claudin 12 CLDN23 0.020 claudin 23 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.