CLDN20 30875

Name: CLDN20	Sequence: fasta or formatted (219aa)		NCBI GI: 47716519
Description: claudin 20		Referenced in: Gap Junctions and Tight Junctions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 19 2 C cysteine 3.7 8 1 D aspartate 3.2 7 1 E glutamate 2.7 6 1 F phenylalanine 3.7 8 1 G glycine 7.3 16 2 H histidine 2.7 6 1 I isoleucine 8.2 18 2 K lysine 3.7 8 1 L leucine 11.4 25 2 M methionine 3.7 8 1 N asparagine 4.6 10 2 P proline 3.7 8 2 Q glutamine 2.7 6 2 R arginine 2.3 5 1 S serine 10.0 22 2 T threonine 7.8 17 1 V valine 6.4 14 1 W tryptophan 1.8 4 1 Y tyrosine 1.8 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 claudin 20 CLDN14 0.353 claudin 14 CLDN14 0.353 claudin 14 CLDN14 0.353 claudin 14 CLDN14 0.353 claudin 14 CLDN14 0.353 claudin 14 CLDN7 0.329 claudin 7 CLDN2 0.309 claudin 2 CLDN1 0.293 claudin 1 CLDN19 0.290 claudin 19 isoform a CLDN19 0.290 claudin 19 isoform b CLDN4 0.269 claudin 4 CLDN3 0.264 claudin 3 CLDN9 0.261 claudin 9 CLDN5 0.259 claudin 5 CLDN5 0.259 claudin 5 CLDN6 0.257 claudin 6 CLDN8 0.235 claudin 8 CLDN17 0.211 claudin 17 CLDN10 0.206 claudin 10 isoform b CLDN10 0.197 claudin 10 isoform a CLDN18 0.194 claudin 18 isoform 2 CLDN18 0.192 claudin 18 isoform 1 CLDN15 0.192 claudin 15 CLDN10 0.165 claudin 10 isoform a_i1 CLDN24 0.139 PREDICTED: claudin-24-like CLDN24 0.137 PREDICTED: claudin-24-like CLDN24 0.137 PREDICTED: claudin-24-like CLDN22 0.132 claudin 22 CLDN11 0.108 claudin 11 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.