CLDN6 5439

Name: CLDN6	Sequence: fasta or formatted (220aa)		NCBI GI: 153792768
Description: claudin 6		Referenced in: Gap Junctions and Tight Junctions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.9 24 2 C cysteine 4.5 10 2 D aspartate 1.8 4 1 E glutamate 2.7 6 2 F phenylalanine 1.8 4 1 G glycine 9.5 21 3 H histidine 0.9 2 1 I isoleucine 4.5 10 2 K lysine 3.2 7 1 L leucine 14.5 32 4 M methionine 2.7 6 1 N asparagine 1.8 4 1 P proline 4.1 9 1 Q glutamine 4.1 9 1 R arginine 2.7 6 1 S serine 8.2 18 1 T threonine 5.0 11 2 V valine 10.5 23 2 W tryptophan 2.7 6 1 Y tyrosine 3.6 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 claudin 6 CLDN9 0.706 claudin 9 CLDN4 0.618 claudin 4 CLDN3 0.585 claudin 3 CLDN5 0.513 claudin 5 CLDN5 0.513 claudin 5 CLDN1 0.415 claudin 1 CLDN7 0.413 claudin 7 CLDN8 0.411 claudin 8 CLDN17 0.406 claudin 17 CLDN19 0.384 claudin 19 isoform a CLDN19 0.379 claudin 19 isoform b CLDN14 0.363 claudin 14 CLDN14 0.363 claudin 14 CLDN14 0.363 claudin 14 CLDN14 0.363 claudin 14 CLDN14 0.363 claudin 14 CLDN2 0.351 claudin 2 CLDN20 0.255 claudin 20 CLDN24 0.253 PREDICTED: claudin-24-like CLDN10 0.253 claudin 10 isoform b CLDN24 0.251 PREDICTED: claudin-24-like CLDN24 0.251 PREDICTED: claudin-24-like CLDN15 0.243 claudin 15 CLDN22 0.239 claudin 22 CLDN18 0.234 claudin 18 isoform 1 CLDN18 0.232 claudin 18 isoform 2 LOC644672 0.203 claudin-like CLDN10 0.200 claudin 10 isoform a CLDN10 0.165 claudin 10 isoform a_i1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.