CLDN18 31586

Name: CLDN18	Sequence: fasta or formatted (261aa)		NCBI GI: 50345279
Description: claudin 18 isoform 2		Referenced in: Gap Junctions and Tight Junctions
Other entries for this name: alt prot [261aa] claudin 18 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.3 27 2 C cysteine 3.1 8 1 D aspartate 2.3 6 1 E glutamate 2.7 7 2 F phenylalanine 4.6 12 1 G glycine 12.3 32 2 H histidine 1.1 3 1 I isoleucine 6.1 16 2 K lysine 3.4 9 2 L leucine 7.7 20 2 M methionine 5.4 14 2 N asparagine 3.8 10 2 P proline 1.9 5 1 Q glutamine 3.1 8 1 R arginine 3.1 8 1 S serine 7.3 19 2 T threonine 7.3 19 1 V valine 8.8 23 2 W tryptophan 1.5 4 1 Y tyrosine 4.2 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 claudin 18 isoform 2 CLDN18 0.928 claudin 18 isoform 1 CLDN19 0.247 claudin 19 isoform a CLDN19 0.243 claudin 19 isoform b CLDN7 0.231 claudin 7 CLDN1 0.223 claudin 1 CLDN10 0.217 claudin 10 isoform a CLDN10 0.215 claudin 10 isoform b CLDN14 0.199 claudin 14 CLDN14 0.199 claudin 14 CLDN14 0.199 claudin 14 CLDN14 0.199 claudin 14 CLDN14 0.199 claudin 14 CLDN6 0.193 claudin 6 CLDN3 0.193 claudin 3 CLDN4 0.189 claudin 4 CLDN15 0.183 claudin 15 CLDN5 0.179 claudin 5 CLDN5 0.179 claudin 5 CLDN10 0.177 claudin 10 isoform a_i1 CLDN8 0.177 claudin 8 CLDN24 0.173 PREDICTED: claudin-24-like CLDN17 0.173 claudin 17 CLDN24 0.171 PREDICTED: claudin-24-like CLDN24 0.171 PREDICTED: claudin-24-like CLDN9 0.169 claudin 9 CLDN20 0.161 claudin 20 CLDN22 0.159 claudin 22 CLDN2 0.157 claudin 2 CLDN11 0.139 claudin 11 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.