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Search of human proteins with 14211869
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14211869 late cornified envelope 3D [Homo sapiens]
(92 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14211869 late cornified envelope 3D [Homo sapiens] 218 6e-58
gi|30410033 late cornified envelope 3E [Homo sapiens] 209 4e-55
gi|30410037 late cornified envelope 3C [Homo sapiens] 178 1e-45
gi|30410041 late cornified envelope 3B [Homo sapiens] 166 5e-42
gi|30410039 late cornified envelope 3A [Homo sapiens] 157 2e-39
gi|30387642 late cornified envelope 4A [Homo sapiens] 123 4e-29
gi|7657685 late cornified envelope 2B [Homo sapiens] 120 2e-28
gi|30410047 late cornified envelope 2C [Homo sapiens] 118 1e-27
gi|30410035 late cornified envelope 5A [Homo sapiens] 115 6e-27
gi|30410045 late cornified envelope 2A [Homo sapiens] 115 8e-27
gi|30410043 late cornified envelope 2D [Homo sapiens] 115 1e-26
gi|239752912 PREDICTED: hypothetical protein [Homo sapiens] 112 5e-26
gi|30387650 late cornified envelope 1E [Homo sapiens] 112 5e-26
gi|30387654 late cornified envelope 1A [Homo sapiens] 108 1e-24
gi|30387648 late cornified envelope 1D [Homo sapiens] 107 2e-24
gi|30387646 late cornified envelope 1F [Homo sapiens] 106 5e-24
gi|30387652 late cornified envelope 1C [Homo sapiens] 102 5e-23
gi|30387656 late cornified envelope 1B [Homo sapiens] 100 4e-22
gi|5174693 small proline-rich protein 2A [Homo sapiens] 47 3e-06
gi|62955831 small proline-rich protein 2B [Homo sapiens] 47 3e-06
gi|83582817 small proline-rich protein 2E [Homo sapiens] 47 3e-06
gi|62945419 small proline-rich protein 2F [Homo sapiens] 46 7e-06
gi|62122851 small proline-rich protein 2G [Homo sapiens] 45 1e-05
gi|56699492 small proline-rich protein 2D [Homo sapiens] 45 1e-05
gi|9506923 cysteine-rich C-terminal 1 [Homo sapiens] 40 3e-04
gi|54400749 keratin associated protein 5-1 [Homo sapiens] 39 7e-04
gi|55770876 notch4 preproprotein [Homo sapiens] 39 0.001
gi|13994372 keratin associated protein 17-1 [Homo sapiens] 39 0.001
gi|84570137 homeobox B3 [Homo sapiens] 39 0.001
gi|87299628 biorientation of chromosomes in cell division 1-like... 38 0.002
>gi|14211869 late cornified envelope 3D [Homo sapiens]
Length = 92
Score = 218 bits (556), Expect = 6e-58
Identities = 92/92 (100%), Positives = 92/92 (100%)
Query: 1 MSCQQNQQQCQPPPKCPSPKCPPKSPVQCLPPASSGCAPSSGGCGPSSEGGCFLNHHRRH 60
MSCQQNQQQCQPPPKCPSPKCPPKSPVQCLPPASSGCAPSSGGCGPSSEGGCFLNHHRRH
Sbjct: 1 MSCQQNQQQCQPPPKCPSPKCPPKSPVQCLPPASSGCAPSSGGCGPSSEGGCFLNHHRRH 60
Query: 61 HRCRRQRPNSCDRGSGQQGGGSGCGHGSGGCC 92
HRCRRQRPNSCDRGSGQQGGGSGCGHGSGGCC
Sbjct: 61 HRCRRQRPNSCDRGSGQQGGGSGCGHGSGGCC 92
>gi|30410033 late cornified envelope 3E [Homo sapiens]
Length = 92
Score = 209 bits (532), Expect = 4e-55
Identities = 88/92 (95%), Positives = 90/92 (97%)
Query: 1 MSCQQNQQQCQPPPKCPSPKCPPKSPVQCLPPASSGCAPSSGGCGPSSEGGCFLNHHRRH 60
MSCQQNQ+QCQPPPKCPSPKCPPK+PVQCLPPASSGCAPSSGGCGPSSEGGCFLNHHRRH
Sbjct: 1 MSCQQNQKQCQPPPKCPSPKCPPKNPVQCLPPASSGCAPSSGGCGPSSEGGCFLNHHRRH 60
Query: 61 HRCRRQRPNSCDRGSGQQGGGSGCGHGSGGCC 92
HRCRRQR NSCDRGSGQQGGGSGC HGSGGCC
Sbjct: 61 HRCRRQRSNSCDRGSGQQGGGSGCCHGSGGCC 92
>gi|30410037 late cornified envelope 3C [Homo sapiens]
Length = 94
Score = 178 bits (451), Expect = 1e-45
Identities = 79/94 (84%), Positives = 81/94 (86%), Gaps = 2/94 (2%)
Query: 1 MSCQQNQQQCQPPPKCPSPKCPPKSPVQCLPPASSGCAPSSGGCGPSSEGGCFLNHHR-- 58
MSCQQNQQQCQPPP CPSPKCPPKSP QCLPP SS CA SSGGCGPSSE GC L+HHR
Sbjct: 1 MSCQQNQQQCQPPPSCPSPKCPPKSPAQCLPPPSSDCALSSGGCGPSSESGCCLSHHRHF 60
Query: 59 RHHRCRRQRPNSCDRGSGQQGGGSGCGHGSGGCC 92
R H+CRRQR NSCDRGSGQQGGGS GHGSGGCC
Sbjct: 61 RSHQCRRQRSNSCDRGSGQQGGGSCRGHGSGGCC 94
>gi|30410041 late cornified envelope 3B [Homo sapiens]
Length = 95
Score = 166 bits (419), Expect = 5e-42
Identities = 76/95 (80%), Positives = 78/95 (82%), Gaps = 3/95 (3%)
Query: 1 MSCQQNQQQCQPPPKCPSPKCPPKSPVQCLPPASSGCAPSSGGC-GPSSEGGCFLNHHR- 58
MSCQQNQQQCQP PKCPSPKCPPKS QCLPPASS CAP G C GPSSEGGC L+HHR
Sbjct: 1 MSCQQNQQQCQPLPKCPSPKCPPKSSAQCLPPASSCCAPRPGCCGGPSSEGGCCLSHHRC 60
Query: 59 -RHHRCRRQRPNSCDRGSGQQGGGSGCGHGSGGCC 92
R HRCRRQ NSCDRGSGQQ G S CG+GSGGCC
Sbjct: 61 CRSHRCRRQSSNSCDRGSGQQDGASDCGYGSGGCC 95
>gi|30410039 late cornified envelope 3A [Homo sapiens]
Length = 89
Score = 157 bits (397), Expect = 2e-39
Identities = 72/94 (76%), Positives = 74/94 (78%), Gaps = 7/94 (7%)
Query: 1 MSCQQNQQQCQPPPKCPSPKCPPKSPVQCLPPASSGCAPSSGGCGPSSEGGCFLNHH--R 58
MSCQQNQQQCQPPPKCP+ KSP QCLPPASS CAPSSGGCGPSSE C L+HH R
Sbjct: 1 MSCQQNQQQCQPPPKCPA-----KSPAQCLPPASSSCAPSSGGCGPSSERSCCLSHHRCR 55
Query: 59 RHHRCRRQRPNSCDRGSGQQGGGSGCGHGSGGCC 92
R HRCR Q NSCDRGSGQQGG S CGH S GCC
Sbjct: 56 RSHRCRCQSSNSCDRGSGQQGGSSSCGHSSAGCC 89
>gi|30387642 late cornified envelope 4A [Homo sapiens]
Length = 99
Score = 123 bits (308), Expect = 4e-29
Identities = 62/100 (62%), Positives = 67/100 (67%), Gaps = 9/100 (9%)
Query: 1 MSCQQNQQQCQPPPKCPSPKCPPKSPVQCL----PPASSGCAPSSGGCG--PSSEGGCFL 54
MSCQQNQQQCQPPPKCP PK PPK P +C PP SS C SSGGCG S GGC L
Sbjct: 1 MSCQQNQQQCQPPPKCPIPKYPPKCPSKCASSCPPPISSCCGSSSGGCGCCSSEGGGCCL 60
Query: 55 NHHRRHH-RCRRQRPNSC-DRGSGQQGGGSGCGHGSGGCC 92
+HHR H C R + ++C GSGQQ GGSGC G GGCC
Sbjct: 61 SHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCSG-GGCC 99
>gi|7657685 late cornified envelope 2B [Homo sapiens]
Length = 110
Score = 120 bits (302), Expect = 2e-28
Identities = 62/113 (54%), Positives = 68/113 (60%), Gaps = 24/113 (21%)
Query: 1 MSCQQNQQQCQPPPKCP---SPKCPPKSPVQCLP---------------PASSGCA-PSS 41
MSCQQNQQQCQPPPKCP +PKCPPK P +CLP P S GC PSS
Sbjct: 1 MSCQQNQQQCQPPPKCPPKCTPKCPPKCPPKCLPQCPAPCSPAVSSCCGPISGGCCGPSS 60
Query: 42 GGCGPSSEGGCFLNHHRRH--HRCRRQRPNSCDRGSGQQGGGSGCGHGSGGCC 92
GGC S GGC L+HHR HR R Q P+ C+ + GGSGC H SGGCC
Sbjct: 61 GGCCNSGAGGCCLSHHRPRLFHRRRHQSPDCCE---SEPSGGSGCCHSSGGCC 110
>gi|30410047 late cornified envelope 2C [Homo sapiens]
Length = 110
Score = 118 bits (295), Expect = 1e-27
Identities = 62/113 (54%), Positives = 66/113 (58%), Gaps = 24/113 (21%)
Query: 1 MSCQQNQQQCQPPPKCPS-------PKCPPKSPVQCLPPA----------SSG--CAPSS 41
MSCQQNQQQCQPPPKCP PKCPPK P QC P SSG C PSS
Sbjct: 1 MSCQQNQQQCQPPPKCPPKCTPKCPPKCPPKCPPQCPAPCFPAVSSCCGPSSGSCCGPSS 60
Query: 42 GGCGPSSEGGCFLNHHRRH--HRCRRQRPNSCDRGSGQQGGGSGCGHGSGGCC 92
GGC S GGC L+HHR HR R Q P+ C+ + GGSGC H SGGCC
Sbjct: 61 GGCCSSGAGGCSLSHHRPRLFHRRRHQSPDCCE---SEPSGGSGCCHSSGGCC 110
>gi|30410035 late cornified envelope 5A [Homo sapiens]
Length = 118
Score = 115 bits (289), Expect = 6e-27
Identities = 61/111 (54%), Positives = 64/111 (57%), Gaps = 19/111 (17%)
Query: 1 MSCQQNQQQCQPPPKCPS-----------PKCPPKSPVQCL----PPASSGCAPSSGGCG 45
MSCQQ+QQQCQPPPKC PKCPPK P QC PP SS C SSGGC
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCTPKCPPKCPPKCPPQCSAPCPPPVSSCCGSSSGGCC 60
Query: 46 PSSEGGCFLNHHRRHHRCRR--QRPNSCDRGSGQQGGGSGCGHGSG--GCC 92
S GGC L+HHR RR Q + C GSGQQ GGS C H SG GCC
Sbjct: 61 SSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCC 111
>gi|30410045 late cornified envelope 2A [Homo sapiens]
Length = 106
Score = 115 bits (288), Expect = 8e-27
Identities = 61/109 (55%), Positives = 65/109 (59%), Gaps = 20/109 (18%)
Query: 1 MSCQQNQQQCQPPPKCPS---PKCPPKS----PVQCLPPASSGCAPSSGGCGPSSEGGCF 53
MSCQQNQQQCQPPPKCP PKCPPK P C PP SS C PSSGGC SS GGC
Sbjct: 1 MSCQQNQQQCQPPPKCPPKCPPKCPPKCRPQCPAPCPPPVSSCCGPSSGGCCGSSSGGCC 60
Query: 54 --------LNHHRRH--HRCRRQRPNSCDRGSGQQGGGSGCGHGSGGCC 92
L+HHR HR R Q P+ C+ + GGSGC H SG CC
Sbjct: 61 SSGGGGCCLSHHRPRLFHRHRHQSPDCCEC---EPSGGSGCCHSSGDCC 106
>gi|30410043 late cornified envelope 2D [Homo sapiens]
Length = 110
Score = 115 bits (287), Expect = 1e-26
Identities = 60/113 (53%), Positives = 65/113 (57%), Gaps = 24/113 (21%)
Query: 1 MSCQQNQQQCQPPPKCPS-----------PKCPPKSPVQCLPPASSGCAPSSGG-CGPSS 48
MSCQQNQQQCQPPPKCP PKCPP+ P C P SS C PSSG CGPSS
Sbjct: 1 MSCQQNQQQCQPPPKCPPKCTPKCPPKCPPKCPPQCPAPCSPAVSSCCGPSSGSCCGPSS 60
Query: 49 -------EGGCFLNHHRRH--HRCRRQRPNSCDRGSGQQGGGSGCGHGSGGCC 92
GGC L+HHR HR R Q P+ C+ + G SGC H SGGCC
Sbjct: 61 GGCCSSGGGGCCLSHHRPRLFHRRRHQSPDCCE---SEPSGASGCCHSSGGCC 110
>gi|239752912 PREDICTED: hypothetical protein [Homo sapiens]
Length = 118
Score = 112 bits (281), Expect = 5e-26
Identities = 63/120 (52%), Positives = 68/120 (56%), Gaps = 30/120 (25%)
Query: 1 MSCQQNQQQCQPPPKC--------PSPKCPPKSPVQCLPPASSGCAPSSGGCGPSSEGG- 51
MSCQQ+QQQCQPPPKC P+PKCPPK P +C PP SS C+ SSGGC SS GG
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKC-PPVSSCCSVSSGGCCGSSSGGS 59
Query: 52 ---------------CFLNHHRRHHRCRRQRPNSCDRGSGQQGGGSGCGHG----SGGCC 92
C L+HHR HHR R RP S D S GG S CG G SGGCC
Sbjct: 60 CGSSSGGCCSSGGGGCCLSHHR-HHRSHRHRPQSSDCCSQPSGGSSCCGGGSGQHSGGCC 118
>gi|30387650 late cornified envelope 1E [Homo sapiens]
Length = 118
Score = 112 bits (281), Expect = 5e-26
Identities = 63/120 (52%), Positives = 68/120 (56%), Gaps = 30/120 (25%)
Query: 1 MSCQQNQQQCQPPPKC--------PSPKCPPKSPVQCLPPASSGCAPSSGGCGPSSEGG- 51
MSCQQ+QQQCQPPPKC P+PKCPPK P +C PP SS C+ SSGGC SS GG
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKC-PPVSSCCSVSSGGCCGSSSGGS 59
Query: 52 ---------------CFLNHHRRHHRCRRQRPNSCDRGSGQQGGGSGCGHG----SGGCC 92
C L+HHR HHR R RP S D S GG S CG G SGGCC
Sbjct: 60 CGSSSGGCCSSGGGGCCLSHHR-HHRSHRHRPQSSDCCSQPSGGSSCCGGGSGQHSGGCC 118
>gi|30387654 late cornified envelope 1A [Homo sapiens]
Length = 110
Score = 108 bits (269), Expect = 1e-24
Identities = 61/115 (53%), Positives = 66/115 (57%), Gaps = 28/115 (24%)
Query: 1 MSCQQNQQQCQPPPKC--------PSPKCPPKSPVQCLPPASSGCAPSSGGCGPSSE--- 49
MSCQQ+QQQCQPPPKC P+PKCPPK P +C PP SS C+ SSGGC SS
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKC-PPVSSCCSVSSGGCCGSSSGGG 59
Query: 50 -----GGCFLNHHRRH--HRCRRQRPNSCDRGSGQQGGGSGC-----GHGSGGCC 92
GGC L+HHRRH HR R Q C Q GGS C G SGGCC
Sbjct: 60 CSSGGGGCCLSHHRRHRSHRHRLQSSGCC----SQPSGGSSCCGGDSGQHSGGCC 110
>gi|30387648 late cornified envelope 1D [Homo sapiens]
Length = 114
Score = 107 bits (267), Expect = 2e-24
Identities = 58/115 (50%), Positives = 64/115 (55%), Gaps = 24/115 (20%)
Query: 1 MSCQQNQQQCQPPPKC--------PSPKCPPKSPVQ-----------CLPPASSGCAPSS 41
MSCQQ+QQQCQPPPKC P+PKCPPK P C + GC +S
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPPVSSCCSVSSGGCCGSSSGGGCGSNS 60
Query: 42 GGCGPSSEGGCFLNHHRRHHRCRRQRPNSCDRGSGQQGGGSGCGHG----SGGCC 92
GGC S GGC L+HHRR HR R+RP S D S GG S CG G SGGCC
Sbjct: 61 GGCCSSGGGGCCLSHHRR-HRSHRRRPQSSDCCSQPSGGSSCCGGGSSQHSGGCC 114
>gi|30387646 late cornified envelope 1F [Homo sapiens]
Length = 118
Score = 106 bits (264), Expect = 5e-24
Identities = 61/120 (50%), Positives = 66/120 (55%), Gaps = 30/120 (25%)
Query: 1 MSCQQNQQQCQP--------PPKCPSPKCPPKSPVQCLPPASSGCAPSSGGCGPSSE--- 49
MSCQQ+QQQCQP PPKCP+PKCPPK P +C PP SS C+ SSGGC SS
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKC-PPVSSCCSVSSGGCCGSSSGGC 59
Query: 50 -------------GGCFLNHHRRHHRCRRQRPNSCDRGSGQQGGGSGCGHG----SGGCC 92
GGC L+HHRR R R RP S D S G S CG G SGGCC
Sbjct: 60 CSSGGGGCCSSGGGGCCLSHHRR-RRSHRHRPQSSDCCSQPSAGSSCCGGGSGQHSGGCC 118
>gi|30387652 late cornified envelope 1C [Homo sapiens]
Length = 118
Score = 102 bits (255), Expect = 5e-23
Identities = 60/120 (50%), Positives = 65/120 (54%), Gaps = 30/120 (25%)
Query: 1 MSCQQNQQQCQPPPKC--------PSPKCPPKSPVQCLPPASSGCAPSSGGCGPSSE--- 49
MSCQQ+QQQCQPPPKC P+PKCPPK P +C PP SS C+ SSGGC SS
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKC-PPVSSCCSVSSGGCCGSSSGGS 59
Query: 50 -------------GGCFLNHHRRHHRCRRQRPNSCDRGSGQQGGGSGCGHG----SGGCC 92
GGC L+HHRR R RP S S GG S CG G SGGCC
Sbjct: 60 CGSSSGGCCSSGGGGCCLSHHRR-RRSHCHRPQSSGCCSQPSGGSSCCGGGSGQHSGGCC 118
>gi|30387656 late cornified envelope 1B [Homo sapiens]
Length = 118
Score = 99.8 bits (247), Expect = 4e-22
Identities = 59/120 (49%), Positives = 64/120 (53%), Gaps = 30/120 (25%)
Query: 1 MSCQQNQQQCQP--------PPKCPSPKCPPKSPVQCLPPASSGCAPSSGGCGPSSE--- 49
MSCQQNQQQCQP PPKC +P+CPPK P +C PP SS C+ SSGGC SS
Sbjct: 1 MSCQQNQQQCQPPPKCIPKCPPKCLTPRCPPKCPPKC-PPVSSCCSVSSGGCCGSSSGGS 59
Query: 50 -------------GGCFLNHHRRHHRCRRQRPNSCDRGSGQQGGGSGCGHG----SGGCC 92
GGC L+HHRR R RP S S GG S CG G SGGCC
Sbjct: 60 CGSSSGGCCSSGGGGCCLSHHRR-RRSHCHRPQSSGCCSQPSGGSSCCGGGSGQHSGGCC 118
>gi|5174693 small proline-rich protein 2A [Homo sapiens]
Length = 72
Score = 47.0 bits (110), Expect = 3e-06
Identities = 23/39 (58%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Query: 1 MSCQQNQ--QQCQPPPKCPSPKC-----PPKSPVQCLPP 32
MS QQ Q Q CQPPP CP+PKC PPK P C PP
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPPP 39
>gi|62955831 small proline-rich protein 2B [Homo sapiens]
Length = 72
Score = 47.0 bits (110), Expect = 3e-06
Identities = 23/39 (58%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Query: 1 MSCQQNQ--QQCQPPPKCPSPKC-----PPKSPVQCLPP 32
MS QQ Q Q CQPPP CP+PKC PPK P C PP
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPPP 39
Score = 28.9 bits (63), Expect = 0.93
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Query: 8 QQCQP--PPKCPSPKCPPKSP 26
QQCQ PP PSP C PK P
Sbjct: 48 QQCQQKYPPVTPSPPCQPKYP 68
>gi|83582817 small proline-rich protein 2E [Homo sapiens]
Length = 72
Score = 47.0 bits (110), Expect = 3e-06
Identities = 23/39 (58%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Query: 1 MSCQQNQ--QQCQPPPKCPSPKC-----PPKSPVQCLPP 32
MS QQ Q Q CQPPP CP+PKC PPK P C PP
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPPP 39
>gi|62945419 small proline-rich protein 2F [Homo sapiens]
Length = 72
Score = 45.8 bits (107), Expect = 7e-06
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 1 MSCQQNQ--QQCQPPPKCPSPKCP-PKSPVQCLPPASSGCAPSSGGCGP 46
MS QQ Q Q CQPPP CP+PKCP P P +C P P S C P
Sbjct: 1 MSYQQQQCKQPCQPPPVCPAPKCPEPCPPPKCPEPCPPSKCPQS--CPP 47
Score = 30.8 bits (68), Expect = 0.25
Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Query: 4 QQNQQQCQPPPKCPSPKCPPKSP 26
QQ QQ+C PP PSP C PK P
Sbjct: 48 QQCQQKC--PPVTPSPPCQPKCP 68
>gi|62122851 small proline-rich protein 2G [Homo sapiens]
Length = 73
Score = 45.4 bits (106), Expect = 1e-05
Identities = 23/39 (58%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Query: 1 MSCQQNQ--QQCQPPPKCPSPKC-----PPKSPVQCLPP 32
MS QQ Q Q CQPPP CP+PKC PPK P LPP
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPP 39
>gi|56699492 small proline-rich protein 2D [Homo sapiens]
Length = 72
Score = 45.1 bits (105), Expect = 1e-05
Identities = 23/42 (54%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 1 MSCQQNQ--QQCQPPPKCPSPKCP-PKSPVQCLPPASSGCAP 39
MS QQ Q Q CQPPP CP+PKCP P P +C P S P
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPSPKCP 42
>gi|9506923 cysteine-rich C-terminal 1 [Homo sapiens]
Length = 99
Score = 40.4 bits (93), Expect = 3e-04
Identities = 28/84 (33%), Positives = 32/84 (38%), Gaps = 8/84 (9%)
Query: 11 QPPPKCPSPKCPPKSPVQCLPPASSG--CAPSSGGCGPSSEGGCFLNHHRRHHRCRRQRP 68
Q P CP+P P +P SG C SG CG SS C R RRQR
Sbjct: 19 QGPAPCPAP-APTPAPASSSSCCGSGRGCCGDSGCCGSSSTSCCCFPRRR-----RRQRS 72
Query: 69 NSCDRGSGQQGGGSGCGHGSGGCC 92
+ C G + S GCC
Sbjct: 73 SGCCCCGGGSQRSQRSNNRSSGCC 96
>gi|54400749 keratin associated protein 5-1 [Homo sapiens]
Length = 278
Score = 39.3 bits (90), Expect = 7e-04
Identities = 30/88 (34%), Positives = 31/88 (35%), Gaps = 19/88 (21%)
Query: 10 CQPPPKCPSPKC---PPKSPVQCLPPASSGCAPSSGGCGP--SSEGGCFLNHHRRHHRCR 64
C P C P C P S C C S G CG S+GGC C
Sbjct: 130 CCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGCSKGACGSCGGSKGGC--------GSC- 180
Query: 65 RQRPNSCDRGSGQQGGGSG-CGHGSGGC 91
C G G GG G CG G GGC
Sbjct: 181 ----GGCKGGCGSCGGSKGGCGSGCGGC 204
Score = 38.9 bits (89), Expect = 0.001
Identities = 28/78 (35%), Positives = 32/78 (41%), Gaps = 12/78 (15%)
Query: 16 CPSPKCPPKSPVQCLPPASSGCAPSSGGCGPS--SEGGCFLNHHRRHHRCRRQRPNSCDR 73
C P C K PV C P S + GGCG S S+GGC C + C
Sbjct: 42 CCVPVCCCK-PVCCRVPTCSCSSCGKGGCGSSGGSKGGC--------GSCGGCK-GGCGS 91
Query: 74 GSGQQGGGSGCGHGSGGC 91
G +GG CG GGC
Sbjct: 92 CGGSKGGCGSCGGSKGGC 109
Score = 38.5 bits (88), Expect = 0.001
Identities = 27/94 (28%), Positives = 31/94 (32%), Gaps = 14/94 (14%)
Query: 3 CQQNQQQCQPPPKCPSPKCPPKSPVQCLPPASSGCAPSSG---GCGPSS--EGGCFLNHH 57
C + C P C P C C GC S G GCG +GGC
Sbjct: 35 CGGSGSSCCVPVCCCKPVCCRVPTCSCSSCGKGGCGSSGGSKGGCGSCGGCKGGC----- 89
Query: 58 RRHHRCRRQRPNSCDRGSGQQGGGSGCGHGSGGC 91
C + C G +GG CG GGC
Sbjct: 90 ---GSCGGSK-GGCGSCGGSKGGCGSCGGSKGGC 119
Score = 37.7 bits (86), Expect = 0.002
Identities = 23/59 (38%), Positives = 23/59 (38%), Gaps = 22/59 (37%)
Query: 34 SSGCAPSSGGCGPSSEGGCFLNHHRRHHRCRRQRPNSCDRGSGQQGGGSGCGHGSGGCC 92
S GC S GGCG S GGC GSG G GSGCG CC
Sbjct: 7 SGGCGSSCGGCG-SGCGGC---------------------GSGCGGCGSGCGGSGSSCC 43
Score = 36.2 bits (82), Expect = 0.006
Identities = 29/90 (32%), Positives = 30/90 (33%), Gaps = 25/90 (27%)
Query: 10 CQPPPKCPSPKCPPKS-------PVQCLPPASSGCAPSSGGCGPSSEGGCFLNHHRRHHR 62
C P C P C S C A C S GGCG S GGC
Sbjct: 136 CCKPMCCCVPACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCG--SCGGC---------- 183
Query: 63 CRRQRPNSCDRGSGQQGG-GSGCGHGSGGC 91
C G +GG GSGCG GC
Sbjct: 184 -----KGGCGSCGGSKGGCGSGCGGCGSGC 208
Score = 30.8 bits (68), Expect = 0.25
Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 7/64 (10%)
Query: 35 SGCAPSSGGCGPSSEGGCFLNHHRRHHRCRRQRPN--SCDRGS-----GQQGGGSGCGHG 87
SGC GCG S C + CR + SC +G G +GG CG
Sbjct: 26 SGCGGCGSGCGGSGSSCCVPVCCCKPVCCRVPTCSCSSCGKGGCGSSGGSKGGCGSCGGC 85
Query: 88 SGGC 91
GGC
Sbjct: 86 KGGC 89
Score = 28.9 bits (63), Expect = 0.93
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 13/60 (21%)
Query: 26 PVQCLPPASSG-CAPSSGGCGPSSEGGCFLNHHRRHHRCRRQRPNSCDRGSGQQGGGSGC 84
PV C +S G CA S GGCG S +C +P C G G S C
Sbjct: 211 PVCCCSCSSCGSCAGSKGGCGSSCS------------QCSCCKPCCCSSGCGSSCCQSSC 258
>gi|55770876 notch4 preproprotein [Homo sapiens]
Length = 2003
Score = 38.5 bits (88), Expect = 0.001
Identities = 32/105 (30%), Positives = 40/105 (38%), Gaps = 25/105 (23%)
Query: 10 CQPPPKCPSPKCPPKSPV-------QCL-PPASSGCAPSS-----GGCGPSSEGG----- 51
C P PK P PP+ CL PPA GC P S G C ++ G
Sbjct: 1102 CLPSPK---PGFPPRCACLSGYGGPDCLTPPAPKGCGPPSPCLYNGSCSETTGLGGPGFR 1158
Query: 52 CFLNHHRRHHRCRRQRPNSCDRGSGQQGGGSGC----GHGSGGCC 92
C H RC++ C+ SG +GC G+ GG C
Sbjct: 1159 CSCPHSSPGPRCQKPGAKGCEGRSGDGACDAGCSGPGGNWDGGDC 1203
>gi|13994372 keratin associated protein 17-1 [Homo sapiens]
Length = 105
Score = 38.5 bits (88), Expect = 0.001
Identities = 24/64 (37%), Positives = 24/64 (37%), Gaps = 10/64 (15%)
Query: 29 CLPPASSGCAPSSGGCGPSSEGGCFLNHHRRHHRCRRQRPNSCDRGSGQQGGGSGCGHGS 88
C P GC S GCG S GG C C G G GG GCG
Sbjct: 23 CCQPGCCGCCGSCCGCGGSGCGGSGCGGSCCGSSC-------CGSGCGGCGGCGGCG--- 72
Query: 89 GGCC 92
GGCC
Sbjct: 73 GGCC 76
>gi|84570137 homeobox B3 [Homo sapiens]
Length = 431
Score = 38.5 bits (88), Expect = 0.001
Identities = 28/100 (28%), Positives = 37/100 (37%), Gaps = 19/100 (19%)
Query: 10 CQPPPKCPSP-KCPPKSPVQCLPPASSGCAPSSGG---------CGPSSEGGC------F 53
C P P P PP SP P S+ S+GG CGP + +
Sbjct: 73 CMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPGTNSTLTKQIFPW 132
Query: 54 LNHHRRHHRCRRQRPNS---CDRGSGQQGGGSGCGHGSGG 90
+ R+ + + P + C G G GGG G G GG
Sbjct: 133 MKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGG 172
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 38.1 bits (87), Expect = 0.002
Identities = 17/42 (40%), Positives = 19/42 (45%)
Query: 9 QCQPPPKCPSPKCPPKSPVQCLPPASSGCAPSSGGCGPSSEG 50
Q QPPP P P P P PP G P +GG G + G
Sbjct: 6 QPQPPPPAPPPPPPQPQPQPPPPPPGPGAGPGAGGAGGAGAG 47
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.503
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,630,486
Number of Sequences: 37866
Number of extensions: 441761
Number of successful extensions: 7610
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 372
Number of HSP's that attempted gapping in prelim test: 4792
Number of HSP's gapped (non-prelim): 2329
length of query: 92
length of database: 18,247,518
effective HSP length: 63
effective length of query: 29
effective length of database: 15,861,960
effective search space: 459996840
effective search space used: 459996840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.