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Search of human proteins with 9910526
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|9910526 opsin 1 (cone pigments), long-wave-sensitive [Homo
sapiens]
(364 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9910526 opsin 1 (cone pigments), long-wave-sensitive [Homo sa... 752 0.0
gi|114687592 opsin 1 (cone pigments), medium-wave-sensitive 2 [H... 729 0.0
gi|4503965 opsin 1 (cone pigments), medium-wave-sensitive [Homo ... 729 0.0
gi|4502387 opsin 1 (cone pigments), short-wave-sensitive [Homo s... 298 7e-81
gi|4506527 rhodopsin [Homo sapiens] 289 2e-78
gi|71999131 opsin 3 [Homo sapiens] 146 3e-35
gi|5730019 peropsin [Homo sapiens] 142 5e-34
gi|15150803 opsin 4 isoform 1 [Homo sapiens] 139 3e-33
gi|71999143 opsin 4 isoform 2 [Homo sapiens] 137 1e-32
gi|38678524 opsin 5 isoform 1 [Homo sapiens] 122 5e-28
gi|5174593 melatonin receptor 1A [Homo sapiens] 96 5e-20
gi|157426873 tachykinin receptor 2 [Homo sapiens] 93 4e-19
gi|39725940 opioid receptor, kappa 1 [Homo sapiens] 87 2e-17
gi|10880131 5-hydroxytryptamine receptor 7 isoform b [Homo sapiens] 87 2e-17
gi|10880129 5-hydroxytryptamine receptor 7 isoform d [Homo sapiens] 87 2e-17
gi|4504547 5-hydroxytryptamine receptor 7 isoform a [Homo sapiens] 87 2e-17
gi|4507343 tachykinin receptor 1 isoform long [Homo sapiens] 86 4e-17
gi|7669548 tachykinin receptor 3 [Homo sapiens] 86 7e-17
gi|150170722 G protein-coupled receptor 50 [Homo sapiens] 85 1e-16
gi|21264324 trace amine associated receptor 1 [Homo sapiens] 84 2e-16
gi|7669546 tachykinin receptor 1 isoform short [Homo sapiens] 82 6e-16
gi|5174595 melatonin receptor 1B [Homo sapiens] 82 8e-16
gi|223633971 G protein-coupled receptor 83 [Homo sapiens] 81 1e-15
gi|4557859 somatostatin receptor 2 [Homo sapiens] 80 3e-15
gi|223633986 trace amine associated receptor 5 [Homo sapiens] 80 3e-15
gi|4557865 somatostatin receptor 5 [Homo sapiens] 79 6e-15
gi|223718055 opioid receptor, mu 1 isoform MOR-1H [Homo sapiens] 79 6e-15
gi|117940060 opioid receptor, mu 1 isoform MOR-1 [Homo sapiens] 79 6e-15
gi|223718712 opioid receptor, mu 1 isoform MOR-1B5 [Homo sapiens] 79 6e-15
gi|223718719 opioid receptor, mu 1 isoform MOR-1B2 [Homo sapiens] 79 6e-15
>gi|9910526 opsin 1 (cone pigments), long-wave-sensitive [Homo
sapiens]
Length = 364
Score = 752 bits (1941), Expect = 0.0
Identities = 364/364 (100%), Positives = 364/364 (100%)
Query: 1 MAQQWSLQRLAGRHPQDSYEDSTQSSIFTYTNSNSTRGPFEGPNYHIAPRWVYHLTSVWM 60
MAQQWSLQRLAGRHPQDSYEDSTQSSIFTYTNSNSTRGPFEGPNYHIAPRWVYHLTSVWM
Sbjct: 1 MAQQWSLQRLAGRHPQDSYEDSTQSSIFTYTNSNSTRGPFEGPNYHIAPRWVYHLTSVWM 60
Query: 61 IFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISIVNQVSGYFV 120
IFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISIVNQVSGYFV
Sbjct: 61 IFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISIVNQVSGYFV 120
Query: 121 LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDAKLAIVGIAFSWIWS 180
LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDAKLAIVGIAFSWIWS
Sbjct: 121 LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDAKLAIVGIAFSWIWS 180
Query: 181 AVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLCYL 240
AVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLCYL
Sbjct: 181 AVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLCYL 240
Query: 241 QVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAANPGYAFH 300
QVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAANPGYAFH
Sbjct: 241 QVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAANPGYAFH 300
Query: 301 PLMAALPAYFAKSATIYNPVIYVFMNRQFRNCILQLFGKKVDDGSELSSASKTEVSSVSS 360
PLMAALPAYFAKSATIYNPVIYVFMNRQFRNCILQLFGKKVDDGSELSSASKTEVSSVSS
Sbjct: 301 PLMAALPAYFAKSATIYNPVIYVFMNRQFRNCILQLFGKKVDDGSELSSASKTEVSSVSS 360
Query: 361 VSPA 364
VSPA
Sbjct: 361 VSPA 364
>gi|114687592 opsin 1 (cone pigments), medium-wave-sensitive 2 [Homo
sapiens]
Length = 364
Score = 729 bits (1881), Expect = 0.0
Identities = 349/364 (95%), Positives = 357/364 (98%)
Query: 1 MAQQWSLQRLAGRHPQDSYEDSTQSSIFTYTNSNSTRGPFEGPNYHIAPRWVYHLTSVWM 60
MAQQWSLQRLAGRHPQDSYEDSTQSSIFTYTNSNSTRGPFEGPNYHIAPRWVYHLTSVWM
Sbjct: 1 MAQQWSLQRLAGRHPQDSYEDSTQSSIFTYTNSNSTRGPFEGPNYHIAPRWVYHLTSVWM 60
Query: 61 IFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISIVNQVSGYFV 120
IFVV ASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTIS+VNQV GYFV
Sbjct: 61 IFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISVVNQVYGYFV 120
Query: 121 LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDAKLAIVGIAFSWIWS 180
LGHPMCVLEGYTVSLCGITGLWSLAIISWERW+VVCKPFGNVRFDAKLAIVGIAFSWIW+
Sbjct: 121 LGHPMCVLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGNVRFDAKLAIVGIAFSWIWA 180
Query: 181 AVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLCYL 240
AVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCI PL+II+LCYL
Sbjct: 181 AVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCITPLSIIVLCYL 240
Query: 241 QVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAANPGYAFH 300
QVWLAIRAVAKQQKESESTQKAEKEVTRMVVVM+ A+C CWGPY FFACFAAANPGY FH
Sbjct: 241 QVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMVLAFCFCWGPYAFFACFAAANPGYPFH 300
Query: 301 PLMAALPAYFAKSATIYNPVIYVFMNRQFRNCILQLFGKKVDDGSELSSASKTEVSSVSS 360
PLMAALPA+FAKSATIYNPVIYVFMNRQFRNCILQLFGKKVDDGSELSSASKTEVSSVSS
Sbjct: 301 PLMAALPAFFAKSATIYNPVIYVFMNRQFRNCILQLFGKKVDDGSELSSASKTEVSSVSS 360
Query: 361 VSPA 364
VSPA
Sbjct: 361 VSPA 364
>gi|4503965 opsin 1 (cone pigments), medium-wave-sensitive [Homo
sapiens]
Length = 364
Score = 729 bits (1881), Expect = 0.0
Identities = 349/364 (95%), Positives = 357/364 (98%)
Query: 1 MAQQWSLQRLAGRHPQDSYEDSTQSSIFTYTNSNSTRGPFEGPNYHIAPRWVYHLTSVWM 60
MAQQWSLQRLAGRHPQDSYEDSTQSSIFTYTNSNSTRGPFEGPNYHIAPRWVYHLTSVWM
Sbjct: 1 MAQQWSLQRLAGRHPQDSYEDSTQSSIFTYTNSNSTRGPFEGPNYHIAPRWVYHLTSVWM 60
Query: 61 IFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISIVNQVSGYFV 120
IFVV ASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTIS+VNQV GYFV
Sbjct: 61 IFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISVVNQVYGYFV 120
Query: 121 LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDAKLAIVGIAFSWIWS 180
LGHPMCVLEGYTVSLCGITGLWSLAIISWERW+VVCKPFGNVRFDAKLAIVGIAFSWIW+
Sbjct: 121 LGHPMCVLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGNVRFDAKLAIVGIAFSWIWA 180
Query: 181 AVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLCYL 240
AVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCI PL+II+LCYL
Sbjct: 181 AVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCITPLSIIVLCYL 240
Query: 241 QVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAANPGYAFH 300
QVWLAIRAVAKQQKESESTQKAEKEVTRMVVVM+ A+C CWGPY FFACFAAANPGY FH
Sbjct: 241 QVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMVLAFCFCWGPYAFFACFAAANPGYPFH 300
Query: 301 PLMAALPAYFAKSATIYNPVIYVFMNRQFRNCILQLFGKKVDDGSELSSASKTEVSSVSS 360
PLMAALPA+FAKSATIYNPVIYVFMNRQFRNCILQLFGKKVDDGSELSSASKTEVSSVSS
Sbjct: 301 PLMAALPAFFAKSATIYNPVIYVFMNRQFRNCILQLFGKKVDDGSELSSASKTEVSSVSS 360
Query: 361 VSPA 364
VSPA
Sbjct: 361 VSPA 364
>gi|4502387 opsin 1 (cone pigments), short-wave-sensitive [Homo
sapiens]
Length = 348
Score = 298 bits (762), Expect = 7e-81
Identities = 145/339 (42%), Positives = 220/339 (64%), Gaps = 2/339 (0%)
Query: 23 TQSSIFTYTNSNSTRGPFEGPNYHIAPRWVYHLTSVWMIFVVTASVFTNGLVLAATMKFK 82
++ + + N +S GP++GP YHIAP W ++L + +M V N +VL AT+++K
Sbjct: 5 SEEEFYLFKNISSV-GPWDGPQYHIAPVWAFYLQAAFMGTVFLIGFPLNAMVLVATLRYK 63
Query: 83 KLRHPLNWILVNLAVADLAETVIASTISIVNQVSGYFVLGHPMCVLEGYTVSLCGITGLW 142
KLR PLN+ILVN++ + + V +GYFV G +C LEG+ ++ G+ W
Sbjct: 64 KLRQPLNYILVNVSFGGFLLCIFSVFPVFVASCNGYFVFGRHVCALEGFLGTVAGLVTGW 123
Query: 143 SLAIISWERWLVVCKPFGNVRFDAKLAIVGIAFSWIWSAVWTAPPIFGWSRYWPHGLKTS 202
SLA +++ER++V+CKPFGN RF +K A+ + +W + PP FGWSR+ P GL+ S
Sbjct: 124 SLAFLAFERYIVICKPFGNFRFSSKHALTVVLATWTIGIGVSIPPFFGWSRFIPEGLQCS 183
Query: 203 CGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLCYLQVWLAIRAVAKQQKESESTQKA 262
CGPD ++ + +SY L + C I+PL++I Y Q+ A++AVA QQ+ES +TQKA
Sbjct: 184 CGPDWYTVGTKYRSESYTWFLFIFCFIVPLSLICFSYTQLLRALKAVAAQQQESATTQKA 243
Query: 263 EKEVTRMVVVMIFAYCVCWGPYTFFACFAAANPGYAFHPLMAALPAYFAKSATIYNPVIY 322
E+EV+RMVVVM+ ++CVC+ PY FA + N + + +P++F+KSA IYNP+IY
Sbjct: 244 EREVSRMVVVMVGSFCVCYVPYAAFAMYMVNNRNHGLDLRLVTIPSFFSKSACIYNPIIY 303
Query: 323 VFMNRQFRNCILQLF-GKKVDDGSELSSASKTEVSSVSS 360
FMN+QF+ CI+++ GK + D S+ S+ KTEVS+VSS
Sbjct: 304 CFMNKQFQACIMKMVCGKAMTDESDTCSSQKTEVSTVSS 342
>gi|4506527 rhodopsin [Homo sapiens]
Length = 348
Score = 289 bits (740), Expect = 2e-78
Identities = 149/345 (43%), Positives = 211/345 (61%), Gaps = 6/345 (1%)
Query: 21 DSTQSSIFTYTNSNST---RGPFEGPNYHIAPRWVYHLTSVWMIFVVTASVFTNGLVLAA 77
+ T+ F SN+T R PFE P Y++A W + + + +M ++ N L L
Sbjct: 2 NGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYV 61
Query: 78 TMKFKKLRHPLNWILVNLAVADLAETVIASTISIVNQVSGYFVLGHPMCVLEGYTVSLCG 137
T++ KKLR PLN+IL+NLAVADL + T ++ + GYFV G C LEG+ +L G
Sbjct: 62 TVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGG 121
Query: 138 ITGLWSLAIISWERWLVVCKPFGNVRFDAKLAIVGIAFSWIWSAVWTAPPIFGWSRYWPH 197
LWSL +++ ER++VVCKP N RF AI+G+AF+W+ + APP+ GWSRY P
Sbjct: 122 EIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPE 181
Query: 198 GLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLCYLQVWLAIRAVAKQQKESE 257
GL+ SCG D ++ +S++I + V IP+ II CY Q+ ++ A QQ+ES
Sbjct: 182 GLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESA 241
Query: 258 STQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAANPGYAFHPLMAALPAYFAKSATIY 317
+TQKAEKEVTRMV++M+ A+ +CW PY A + + G F P+ +PA+FAKSA IY
Sbjct: 242 TTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIY 301
Query: 318 NPVIYVFMNRQFRNCILQLF--GKK-VDDGSELSSASKTEVSSVS 359
NPVIY+ MN+QFRNC+L GK + D ++ SKTE S V+
Sbjct: 302 NPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVA 346
>gi|71999131 opsin 3 [Homo sapiens]
Length = 402
Score = 146 bits (368), Expect = 3e-35
Identities = 91/276 (32%), Positives = 146/276 (52%), Gaps = 15/276 (5%)
Query: 68 VFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISIVNQVSGYFVLGHPMCV 127
V N LVL KF++LR P + +LVN++++DL ++ T + V+ + +V CV
Sbjct: 56 VGNNLLVLVLYYKFQRLRTPTHLLLVNISLSDLLVSLFGVTFTFVSCLRNGWVWDTVGCV 115
Query: 128 LEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVR-FDAKLAIVGIAFSWIWSAVWTAP 186
+G++ SL GI + +L ++++ER++ V + R + A I + W++S W
Sbjct: 116 WDGFSGSLFGIVSIATLTVLAYERYIRVV----HARVINFSWAWRAITYIWLYSLAWAGA 171
Query: 187 PIFGWSRYW--PHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLCYLQVWL 244
P+ GW+RY HGL G V S S+++ L + C ++PL +I CY +
Sbjct: 172 PLLGWNRYILDVHGL----GCTVDWKSKDANDSSFVLFLFLGCLVVPLGVIAHCYGHILY 227
Query: 245 AIRAVA----KQQKESESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAANPGYAFH 300
+IR + Q + K EK++ +M +MIF + VCW PY G+
Sbjct: 228 SIRMLRCVEDLQTIQVIKILKYEKKLAKMCFLMIFTFLVCWMPYIVICFLVVNGHGHLVT 287
Query: 301 PLMAALPAYFAKSATIYNPVIYVFMNRQFRNCILQL 336
P ++ + FAKS T+YNPVIYVFM R+FR +LQL
Sbjct: 288 PTISIVSYLFAKSNTVYNPVIYVFMIRKFRRSLLQL 323
>gi|5730019 peropsin [Homo sapiens]
Length = 337
Score = 142 bits (358), Expect = 5e-34
Identities = 87/310 (28%), Positives = 149/310 (48%), Gaps = 12/310 (3%)
Query: 53 YHLTSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISIV 112
+++ + ++I S+ +N +VL +K+K+LR P N I++NLAV D+ + I +S
Sbjct: 25 HNIVATYLIMAGMISIISNIIVLGIFIKYKELRTPTNAIIINLAVTDIGVSSIGYPMSAA 84
Query: 113 NQVSGYFVLGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDAKLAIVG 172
+ + G + G+ C + G+ + L +++ +R+L +C P R I
Sbjct: 85 SDLYGSWKFGYAGCQVYAGLNIFFGMASIGLLTVVAVDRYLTICLPDVGRRMTTNTYIGL 144
Query: 173 IAFSWIWSAVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPL 232
I +WI W PI GW+ Y P +C + + SY + ++ I+PL
Sbjct: 145 ILGAWINGLFWALMPIIGWASYAPDPTGATC--TINWRKNDRSFVSYTMTVIAINFIVPL 202
Query: 233 AIIMLCYLQVWLAIRAVAKQQKESESTQKAEK------EVTRMVVVMIFAYCVCWGPYTF 286
++ CY V L+I K S+ T+ + +VT+M V+MI + V W PY+
Sbjct: 203 TVMFYCYYHVTLSI----KHHTTSDCTESLNRDWSDQIDVTKMSVIMICMFLVAWSPYSI 258
Query: 287 FACFAAANPGYAFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCILQLFGKKVDDGSE 346
+A+ P MA + FAKS+T YNP IYV N++FR +L +F +
Sbjct: 259 VCLWASFGDPKKIPPPMAIIAPLFAKSSTFYNPCIYVVANKKFRRAMLAMFKCQTHQTMP 318
Query: 347 LSSASKTEVS 356
++S +VS
Sbjct: 319 VTSILPMDVS 328
>gi|15150803 opsin 4 isoform 1 [Homo sapiens]
Length = 478
Score = 139 bits (351), Expect = 3e-33
Identities = 92/340 (27%), Positives = 164/340 (48%), Gaps = 25/340 (7%)
Query: 18 SYEDSTQSSIFTYTNSNSTRGPFEG---------PNYHIAPRWVYHLTSVWMIFVVTASV 68
S+ DS+QSSI + S G P + Y L +V ++ +T +
Sbjct: 27 SWWDSSQSSISSLGRLPSISPTAPGTWAAAWVPLPTVDVPDHAHYTLGTVILLVGLTG-M 85
Query: 69 FTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISIVNQVSGYFVLGHPMCVL 128
N V+ + + LR P N ++NLAV+D + + + + + ++ G C
Sbjct: 86 LGNLTVIYTFCRSRSLRTPANMFIINLAVSDFLMSFTQAPVFFTSSLYKQWLFGETGCEF 145
Query: 129 EGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDAKLAIVGIAFS-WIWSAVWTAPP 187
+ +L GI+ + +L I+ +R+LV+ +P +K + W+++ W+ PP
Sbjct: 146 YAFCGALFGISSMITLTAIALDRYLVITRPLATFGVASKRRAAFVLLGVWLYALAWSLPP 205
Query: 188 IFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLCYLQVWLAIR 247
FGWS Y P GL TSC D S + P V++Y ++L +PL II+ CY+ ++ AIR
Sbjct: 206 FFGWSAYVPEGLLTSCSWDYMSFT--PAVRAYTMLLCCFVFFLPLLIIIYCYIFIFRAIR 263
Query: 248 ---------AVAKQQKES---ESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAANP 295
K ES ++E ++ ++++++I + + W PY+ A A A
Sbjct: 264 ETGRALQTFGACKGNGESLWQRQRLQSECKMAKIMLLVILLFVLSWAPYSAVALVAFAGY 323
Query: 296 GYAFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCILQ 335
+ P M+++PA AK++ I+NP+IY + ++R I Q
Sbjct: 324 AHVLTPYMSSVPAVIAKASAIHNPIIYAITHPKYRVAIAQ 363
>gi|71999143 opsin 4 isoform 2 [Homo sapiens]
Length = 489
Score = 137 bits (346), Expect = 1e-32
Identities = 77/270 (28%), Positives = 139/270 (51%), Gaps = 15/270 (5%)
Query: 79 MKFKKLRHPLNWILVNLAVADLAETVIASTISIVNQVSGYFVLGHPMCVLEGYTVSLCGI 138
M+ + LR P N ++NLAV+D + + + + + ++ G C + +L GI
Sbjct: 107 MQSRSLRTPANMFIINLAVSDFLMSFTQAPVFFTSSLYKQWLFGETGCEFYAFCGALFGI 166
Query: 139 TGLWSLAIISWERWLVVCKPFGNVRFDAKLAIVGIAFS-WIWSAVWTAPPIFGWSRYWPH 197
+ + +L I+ +R+LV+ +P +K + W+++ W+ PP FGWS Y P
Sbjct: 167 SSMITLTAIALDRYLVITRPLATFGVASKRRAAFVLLGVWLYALAWSLPPFFGWSAYVPE 226
Query: 198 GLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLCYLQVWLAIR---------A 248
GL TSC D S + P V++Y ++L +PL II+ CY+ ++ AIR
Sbjct: 227 GLLTSCSWDYMSFT--PAVRAYTMLLCCFVFFLPLLIIIYCYIFIFRAIRETGRALQTFG 284
Query: 249 VAKQQKES---ESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAANPGYAFHPLMAA 305
K ES ++E ++ ++++++I + + W PY+ A A A + P M++
Sbjct: 285 ACKGNGESLWQRQRLQSECKMAKIMLLVILLFVLSWAPYSAVALVAFAGYAHVLTPYMSS 344
Query: 306 LPAYFAKSATIYNPVIYVFMNRQFRNCILQ 335
+PA AK++ I+NP+IY + ++R I Q
Sbjct: 345 VPAVIAKASAIHNPIIYAITHPKYRVAIAQ 374
>gi|38678524 opsin 5 isoform 1 [Homo sapiens]
Length = 354
Score = 122 bits (306), Expect = 5e-28
Identities = 76/306 (24%), Positives = 147/306 (48%), Gaps = 7/306 (2%)
Query: 59 WMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISIVNQVSGY 118
++ + S F NG VL + + KK P + +NLAV DL +V+ +I++
Sbjct: 39 YLTIIGILSTFGNGYVLYMSSRRKKKLRPAEIMTINLAVCDLGISVVGKPFTIISCFCHR 98
Query: 119 FVLGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDAKLAIVGIAFSWI 178
+V G C G+ G L ++ +S +R+L +C V K A + +A W
Sbjct: 99 WVFGWIGCRWYGWAGFFFGCGSLITMTAVSLDRYLKICYLSYGVWLKRKHAYICLAAIWA 158
Query: 179 WSAVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLC 238
+++ WT P+ G Y P TSC D + + G Q +++ ++ C ++P A+I+
Sbjct: 159 YASFWTTMPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFS 218
Query: 239 YLQVWLAIRAVAKQ----QKESESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAAN 294
Y+++ +++ +K+ S+ E ++T++ +++ + + W PY + ++A
Sbjct: 219 YVKIIAKVKSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFG 278
Query: 295 PGYAFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCI---LQLFGKKVDDGSELSSAS 351
+ ++ +P AKSA +YNP+IY ++ +F C L+ KK +G L + +
Sbjct: 279 RPDSIPIQLSVVPTLLAKSAAMYNPIIYQVIDYKFACCQTGGLKATKKKSLEGFRLHTVT 338
Query: 352 KTEVSS 357
SS
Sbjct: 339 TVRKSS 344
>gi|5174593 melatonin receptor 1A [Homo sapiens]
Length = 350
Score = 95.9 bits (237), Expect = 5e-20
Identities = 67/291 (23%), Positives = 135/291 (46%), Gaps = 19/291 (6%)
Query: 49 PRWVYHLTSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIAST 108
P W+ + +IF + + N LV+ + + KKLR+ N +V+LAVADL +
Sbjct: 23 PSWLASALACVLIFTIVVDILGNLLVILSVYRNKKLRNAGNIFVVSLAVADLVVAIYPYP 82
Query: 109 ISIVNQVSGYFVLGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFG-NVRFDAK 167
+ +++ + + LG+ C + G+ + L I ++++ I+ R+ +C + + +K
Sbjct: 83 LVLMSIFNNGWNLGYLHCQVSGFLMGLSVIGSIFNITGIAINRYCYICHSLKYDKLYSSK 142
Query: 168 LAIVGIAFSWIWSAVWTAPPI-FGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVT 226
++ + W+ + P + G +Y P + V S +Y I ++V
Sbjct: 143 NSLCYVLLIWLLTLAAVLPNLRAGTLQYDPRIYSCTFAQSVSS--------AYTIAVVVF 194
Query: 227 CCIIPLAIIMLCYLQVWLAIRAVAKQQKESESTQKAEKE----VTRMVVVMIFAYCVCWG 282
++P+ I++ CYL++W+ + V ++ K + ++ VT VV ++FA +CW
Sbjct: 195 HFLVPMIIVIFCYLRIWILVLQVRQRVKPDRKPKLKPQDFRNFVTMFVVFVLFA--ICWA 252
Query: 283 PYTFFACFAAANPGYAFHPL---MAALPAYFAKSATIYNPVIYVFMNRQFR 330
P F A++P + + Y A + N +IY +N+ FR
Sbjct: 253 PLNFIGLAVASDPASMVPRIPEWLFVASYYMAYFNSCLNAIIYGLLNQNFR 303
>gi|157426873 tachykinin receptor 2 [Homo sapiens]
Length = 398
Score = 92.8 bits (229), Expect = 4e-19
Identities = 71/316 (22%), Positives = 137/316 (43%), Gaps = 14/316 (4%)
Query: 23 TQSSIFTYTNSNSTRGPFEGPNYHIAPRWVYHLTSVWMIFVVTASVFTNGLVLAATMKFK 82
T+++I + SN+T G P W L + + +V +V N +V+ + +
Sbjct: 8 TEANISSGPESNTT-----GITAFSMPSWQLALWATAYLALVLVAVTGNAIVIWIILAHR 62
Query: 83 KLRHPLNWILVNLAVADLAETVIASTISIVNQVSGYFVLGHPMCVLEGYTVSLCGITGLW 142
++R N+ +VNLA+ADL + + V + G C + ++
Sbjct: 63 RMRTVTNYFIVNLALADLCMAAFNAAFNFVYASHNIWYFGRAFCYFQNLFPITAMFVSIY 122
Query: 143 SLAIISWERWLVVCKPFGNVRFDAKLAIVGIAFSWIWSAVWTAPPIFGWSRYWPHGLKTS 202
S+ I+ +R++ + PF R A IA W+ + +P F + G T
Sbjct: 123 SMTAIAADRYMAIVHPF-QPRLSAPSTKAVIAGIWLVALALASPQCFYSTVTMDQG-ATK 180
Query: 203 CGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLCYLQVWLAI--RAVAKQQKESESTQ 260
C S + Y +V++ +PLA++ + Y + L + RAV Q + +
Sbjct: 181 CVVAWPEDSGGKTLLLYHLVVIALIYFLPLAVMFVAYSVIGLTLWRRAVPGHQAHGANLR 240
Query: 261 --KAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAANPGYAFHPLMAALPA---YFAKSAT 315
+A K+ + +V+++ + +CW PY + + H + + + A S+T
Sbjct: 241 HLQAMKKFVKTMVLVVLTFAICWLPYHLYFILGSFQEDIYCHKFIQQVYLALFWLAMSST 300
Query: 316 IYNPVIYVFMNRQFRN 331
+YNP+IY +N +FR+
Sbjct: 301 MYNPIIYCCLNHRFRS 316
>gi|39725940 opioid receptor, kappa 1 [Homo sapiens]
Length = 380
Score = 87.4 bits (215), Expect = 2e-17
Identities = 76/298 (25%), Positives = 138/298 (46%), Gaps = 21/298 (7%)
Query: 46 HIAPRWVYHLTSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETV- 104
HI+P +T+V+ + V V N LV+ +++ K++ N + NLA+AD T
Sbjct: 53 HISPAIPVIITAVYSVVFVVGLV-GNSLVMFVIIRYTKMKTATNIYIFNLALADALVTTT 111
Query: 105 --IASTISIVNQVSGYFVLGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNV 162
ST+ ++N VL + ++ Y + T +++L ++S +R++ VC P +
Sbjct: 112 MPFQSTVYLMNSWPFGDVLCKIVISIDYYNM----FTSIFTLTMMSVDRYIAVCHPVKAL 167
Query: 163 RFDA--KLAIVGIAFSWIWSAVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYM 220
F K I+ I + S+V + + G ++ C F Y +M
Sbjct: 168 DFRTPLKAKIINICIWLLSSSVGISAIVLGGTKVREDVDVIECSLQ-FPDDDYSWWDLFM 226
Query: 221 -IVLMVTCCIIPLAIIMLCYLQVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMIFAYCV 279
I + + +IP+ II++CY + L +++V E + + +TR+V+V++ + V
Sbjct: 227 KICVFIFAFVIPVLIIIVCYTLMILRLKSVRLLSGSREKDRNLRR-ITRLVLVVVAVFVV 285
Query: 280 CWGPYTFFACFAAANPGYAFHPLMAALPAYFAKSATIY-----NPVIYVFMNRQFRNC 332
CW P F A G H AAL +Y+ A Y NP++Y F++ F+ C
Sbjct: 286 CWTPIHIFILVEAL--GSTSHS-TAALSSYYFCIALGYTNSSLNPILYAFLDENFKRC 340
>gi|10880131 5-hydroxytryptamine receptor 7 isoform b [Homo sapiens]
Length = 432
Score = 87.0 bits (214), Expect = 2e-17
Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 62/319 (19%)
Query: 60 MIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETV-IASTISIVNQVSGY 118
+ + ++ N LV+ + KKLR P N+++V+LA+ADL+ V + +S+ + + G
Sbjct: 88 LTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAVMPFVSVTDLIGGK 147
Query: 119 FVLGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VRFDAKLAIVGIAFSW 177
++ GH C + +C + +L +IS +R+L + +P VR + K I W
Sbjct: 148 WIFGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILSVW 207
Query: 178 IWSAVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIML 237
+ SA T PP+FGW++ D Y I IP+++++
Sbjct: 208 LLSASITLPPLFGWAQNVNDDKVCLISQDF----------GYTIYSTAVAFYIPMSVMLF 257
Query: 238 CYLQVW-----------------------LAIRAVAKQQKESE----------------S 258
Y Q++ +A+ + K QKE E S
Sbjct: 258 MYYQIYKAARKSAAKHKFPGFPRVEPDSVIALNGIVKLQKEVEECANLSRLLKHERKNIS 317
Query: 259 TQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAANPGYAFHPLMAALPAYFAK------ 312
K E++ + +++ A+ VCW P F + A P + + +P + +
Sbjct: 318 IFKREQKAATTLGIIVGAFTVCWLP---FFLLSTARP-FICGTSCSCIPLWVERTFLWLG 373
Query: 313 -SATIYNPVIYVFMNRQFR 330
+ ++ NP IY F NR R
Sbjct: 374 YANSLINPFIYAFFNRDLR 392
>gi|10880129 5-hydroxytryptamine receptor 7 isoform d [Homo sapiens]
Length = 479
Score = 87.0 bits (214), Expect = 2e-17
Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 62/319 (19%)
Query: 60 MIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETV-IASTISIVNQVSGY 118
+ + ++ N LV+ + KKLR P N+++V+LA+ADL+ V + +S+ + + G
Sbjct: 88 LTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAVMPFVSVTDLIGGK 147
Query: 119 FVLGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VRFDAKLAIVGIAFSW 177
++ GH C + +C + +L +IS +R+L + +P VR + K I W
Sbjct: 148 WIFGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILSVW 207
Query: 178 IWSAVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIML 237
+ SA T PP+FGW++ D Y I IP+++++
Sbjct: 208 LLSASITLPPLFGWAQNVNDDKVCLISQDF----------GYTIYSTAVAFYIPMSVMLF 257
Query: 238 CYLQVW-----------------------LAIRAVAKQQKESE----------------S 258
Y Q++ +A+ + K QKE E S
Sbjct: 258 MYYQIYKAARKSAAKHKFPGFPRVEPDSVIALNGIVKLQKEVEECANLSRLLKHERKNIS 317
Query: 259 TQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAANPGYAFHPLMAALPAYFAK------ 312
K E++ + +++ A+ VCW P F + A P + + +P + +
Sbjct: 318 IFKREQKAATTLGIIVGAFTVCWLP---FFLLSTARP-FICGTSCSCIPLWVERTFLWLG 373
Query: 313 -SATIYNPVIYVFMNRQFR 330
+ ++ NP IY F NR R
Sbjct: 374 YANSLINPFIYAFFNRDLR 392
>gi|4504547 5-hydroxytryptamine receptor 7 isoform a [Homo sapiens]
Length = 445
Score = 87.0 bits (214), Expect = 2e-17
Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 62/319 (19%)
Query: 60 MIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETV-IASTISIVNQVSGY 118
+ + ++ N LV+ + KKLR P N+++V+LA+ADL+ V + +S+ + + G
Sbjct: 88 LTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAVMPFVSVTDLIGGK 147
Query: 119 FVLGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VRFDAKLAIVGIAFSW 177
++ GH C + +C + +L +IS +R+L + +P VR + K I W
Sbjct: 148 WIFGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILSVW 207
Query: 178 IWSAVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIML 237
+ SA T PP+FGW++ D Y I IP+++++
Sbjct: 208 LLSASITLPPLFGWAQNVNDDKVCLISQDF----------GYTIYSTAVAFYIPMSVMLF 257
Query: 238 CYLQVW-----------------------LAIRAVAKQQKESE----------------S 258
Y Q++ +A+ + K QKE E S
Sbjct: 258 MYYQIYKAARKSAAKHKFPGFPRVEPDSVIALNGIVKLQKEVEECANLSRLLKHERKNIS 317
Query: 259 TQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAANPGYAFHPLMAALPAYFAK------ 312
K E++ + +++ A+ VCW P F + A P + + +P + +
Sbjct: 318 IFKREQKAATTLGIIVGAFTVCWLP---FFLLSTARP-FICGTSCSCIPLWVERTFLWLG 373
Query: 313 -SATIYNPVIYVFMNRQFR 330
+ ++ NP IY F NR R
Sbjct: 374 YANSLINPFIYAFFNRDLR 392
>gi|4507343 tachykinin receptor 1 isoform long [Homo sapiens]
Length = 407
Score = 86.3 bits (212), Expect = 4e-17
Identities = 66/295 (22%), Positives = 123/295 (41%), Gaps = 10/295 (3%)
Query: 43 PNYHIAPRWVYHLTSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAE 102
PN + P W L + +V SV N +V+ + K++R N+ LVNLA A+ +
Sbjct: 22 PNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASM 81
Query: 103 TVIASTISIVNQVSGYFVLGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNV 162
+ ++ V + G C + ++S+ ++++R++ + P
Sbjct: 82 AAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPL-QP 140
Query: 163 RFDAKLAIVGIAFSWIWSAVWTAPP-IFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMI 221
R A V I W+ + + P + + P + Y V Y I
Sbjct: 141 RLSATATKVVICVIWVLALLLAFPQGYYSTTETMPSRVVCMIEWPEHPNKIYEKV--YHI 198
Query: 222 VLMVTCCIIPLAIIMLCYLQVWLAIRAVAKQQKESESTQK---AEKEVTRMVVVMIFAYC 278
+ V +PL +I Y V + + A S+ + A+++V +M++V++ +
Sbjct: 199 CVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFA 258
Query: 279 VCWGPYTFFACFAAANPGY---AFHPLMAALPAYFAKSATIYNPVIYVFMNRQFR 330
+CW P+ F NP F + + A S+T+YNP+IY +N +FR
Sbjct: 259 ICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFR 313
>gi|7669548 tachykinin receptor 3 [Homo sapiens]
Length = 465
Score = 85.5 bits (210), Expect = 7e-17
Identities = 62/294 (21%), Positives = 129/294 (43%), Gaps = 12/294 (4%)
Query: 44 NYHIAPRWVYHLTSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAET 103
N + P W L S+ VV +V N +V+ + K++R N+ LVNLA +D +
Sbjct: 76 NQFVQPSWRIALWSLAYGVVVAVAVLGNLIVIWIILAHKRMRTVTNYFLVNLAFSDASMA 135
Query: 104 VIASTISIVNQVSGYFVLGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVR 163
+ ++ + + + G C + + ++S+ I+ +R++ + P R
Sbjct: 136 AFNTLVNFIYALHSEWYFGANYCRFQNFFPITAVFASIYSMTAIAVDRYMAIIDPL-KPR 194
Query: 164 FDAKLAIVGIAFSWIWSAVWTAPP-IFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIV 222
A + I WI + + P ++ ++ P +T C G +++
Sbjct: 195 LSATATKIVIGSIWILAFLLAFPQCLYSKTKVMPG--RTLCFVQWPEGPKQHFTYHIIVI 252
Query: 223 LMVTCCIIPLAIIMLCYLQVWLAI---RAVAKQQKESESTQKAEKEVTRMVVVMIFAYCV 279
++V C PL I+ + Y V + + + KA+++V +M+++++ + +
Sbjct: 253 ILVYC--FPLLIMGITYTIVGITLWGGEIPGDTCDKYHEQLKAKRKVVKMMIIVVMTFAI 310
Query: 280 CWGPYTFFACFAAANP---GYAFHPLMAALPAYFAKSATIYNPVIYVFMNRQFR 330
CW PY + A + + + + A S+T+YNP+IY +N++FR
Sbjct: 311 CWLPYHIYFILTAIYQQLNRWKYIQQVYLASFWLAMSSTMYNPIIYCCLNKRFR 364
>gi|150170722 G protein-coupled receptor 50 [Homo sapiens]
Length = 617
Score = 84.7 bits (208), Expect = 1e-16
Identities = 64/276 (23%), Positives = 119/276 (43%), Gaps = 13/276 (4%)
Query: 60 MIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISIVNQVSGYF 119
M+ + + N +V+ A K KKLR+ N +V+L+VAD+ + + + G +
Sbjct: 35 MVITIVVDLIGNSMVILAVTKNKKLRNSGNIFVVSLSVADMLVAIYPYPLMLHAMSIGGW 94
Query: 120 VLGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVR-FDAKLAIVGIAFSWI 178
L C + G+ L + ++++ I+ R+ +C R F + + + +WI
Sbjct: 95 DLSQLQCQMVGFITGLSVVGSIFNIVAIAINRYCYICHSLQYERIFSVRNTCIYLVITWI 154
Query: 179 WSAVWTAPPIF-GWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIML 237
+ + P ++ G Y P +C +F+ + P + + ++ ++PL I+
Sbjct: 155 MTVLAVLPNMYIGTIEYDPR--TYTC---IFNYLNNP---VFTVTIVCIHFVLPLLIVGF 206
Query: 238 CYLQVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAANPGY 297
CY+++W + A ++ Q AE + V+ + VCW P A +P
Sbjct: 207 CYVRIWTKVLAARDPAGQNPDNQLAEVRNFLTMFVIFLLFAVCWCPINVLTVLVAVSPKE 266
Query: 298 AFH--PLMAALPAYF-AKSATIYNPVIYVFMNRQFR 330
P L AYF A + N VIY +N FR
Sbjct: 267 MAGKIPNWLYLAAYFIAYFNSCLNAVIYGLLNENFR 302
>gi|21264324 trace amine associated receptor 1 [Homo sapiens]
Length = 339
Score = 84.3 bits (207), Expect = 2e-16
Identities = 70/308 (22%), Positives = 134/308 (43%), Gaps = 43/308 (13%)
Query: 60 MIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISIVNQVSGYF 119
M+ ++ ++ N +V+ + FK+L P NW++ ++A D + S+V +
Sbjct: 30 MVLIILTTLVGNLIVIVSISHFKQLHTPTNWLIHSMATVDFLLGCLVMPYSMVRSAEHCW 89
Query: 120 VLGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDAKLAIVGIAFSWIW 179
G C + T + ++ L+ IS +R+ VC P +R+ AK+ I+ I
Sbjct: 90 YFGEVFCKIHTSTDIMLSSASIFHLSFISIDRYYAVCDP---LRYKAKMNILVICVMIFI 146
Query: 180 SAVWTAPPIFGWSR-------------YWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVT 226
S W+ P +F + Y+ H + G VF S GV ++M T
Sbjct: 147 S--WSVPAVFAFGMIFLELNFKGAEEIYYKH-VHCRGGCSVFF-SKISGVLTFM-----T 197
Query: 227 CCIIPLAIIMLCYLQVWLAIRAVAKQQKESES------------TQKAEKEVTRMVVVMI 274
IP +I++ Y +++L + A+ ++ +Q E++ + + +++
Sbjct: 198 SFYIPGSIMLCVYYRIYLIAKEQARLISDANQKLQIGLEMKNGISQSKERKAVKTLGIVM 257
Query: 275 FAYCVCWGPYTFFACFAAANP--GYAFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNC 332
+ +CW P FF C +P Y P + + +F + +NP++Y F FR
Sbjct: 258 GVFLICWCP--FFIC-TVMDPFLHYIIPPTLNDVLIWFGYLNSTFNPMVYAFFYPWFRKA 314
Query: 333 I-LQLFGK 339
+ + LFGK
Sbjct: 315 LKMMLFGK 322
>gi|7669546 tachykinin receptor 1 isoform short [Homo sapiens]
Length = 311
Score = 82.4 bits (202), Expect = 6e-16
Identities = 64/291 (21%), Positives = 120/291 (41%), Gaps = 10/291 (3%)
Query: 43 PNYHIAPRWVYHLTSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAE 102
PN + P W L + +V SV N +V+ + K++R N+ LVNLA A+ +
Sbjct: 22 PNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASM 81
Query: 103 TVIASTISIVNQVSGYFVLGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNV 162
+ ++ V + G C + ++S+ ++++R++ + P
Sbjct: 82 AAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPL-QP 140
Query: 163 RFDAKLAIVGIAFSWIWSAVWTAPP-IFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMI 221
R A V I W+ + + P + + P + Y V Y I
Sbjct: 141 RLSATATKVVICVIWVLALLLAFPQGYYSTTETMPSRVVCMIEWPEHPNKIYEKV--YHI 198
Query: 222 VLMVTCCIIPLAIIMLCYLQVWLAIRAVAKQQKESESTQK---AEKEVTRMVVVMIFAYC 278
+ V +PL +I Y V + + A S+ + A+++V +M++V++ +
Sbjct: 199 CVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFA 258
Query: 279 VCWGPYTFFACFAAANPGY---AFHPLMAALPAYFAKSATIYNPVIYVFMN 326
+CW P+ F NP F + + A S+T+YNP+IY +N
Sbjct: 259 ICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLN 309
>gi|5174595 melatonin receptor 1B [Homo sapiens]
Length = 362
Score = 82.0 bits (201), Expect = 8e-16
Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 25/294 (8%)
Query: 49 PRWVYHLTSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIAST 108
P WV S +I V N LV+ + ++ +KLR+ N LV+LA+ADL
Sbjct: 36 PPWVAPALSAVLIVTTAVDVVGNLLVILSVLRNRKLRNAGNLFLVSLALADLVVAFYPYP 95
Query: 109 ISIVNQVSGYFVLGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDAKL 168
+ +V + LG C + + L I ++++ I+ R+ +C R +
Sbjct: 96 LILVAIFYDGWALGEEHCKASAFVMGLSVIGSVFNITAIAINRYCYICHSMAYHRIYRRW 155
Query: 169 -AIVGIAFSWIWSAVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQS-YMIVLMVT 226
+ I W+ + V P F S + P ++S + + Y ++V
Sbjct: 156 HTPLHICLIWLLTVVALLPNFFVGSLEY--------DPRIYSCTFIQTASTQYTAAVVVI 207
Query: 227 CCIIPLAIIMLCYLQVW-LAIRAVAKQQKESESTQK---AEKEVTRMVVVMIFAYCVCWG 282
++P+A++ CYL++W L ++A K + ES K +T VV +IFA +CW
Sbjct: 208 HFLLPIAVVSFCYLRIWVLVLQARRKAKPESRLCLKPSDLRSFLTMFVVFVIFA--ICWA 265
Query: 283 PYTFFACFAAANPGYAFHPL------MAALPAYFAKSATIYNPVIYVFMNRQFR 330
P A NP + + L AYF + N ++Y +N+ FR
Sbjct: 266 PLNCIGLAVAINPQEMAPQIPEGLFVTSYLLAYF---NSCLNAIVYGLLNQNFR 316
>gi|223633971 G protein-coupled receptor 83 [Homo sapiens]
Length = 423
Score = 81.3 bits (199), Expect = 1e-15
Identities = 64/278 (23%), Positives = 128/278 (46%), Gaps = 13/278 (4%)
Query: 62 FVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISIVNQVSGYFVL 121
F++ S+F N LV K +++ + +VNLAVAD+ T++ + ++V V+ ++
Sbjct: 80 FIIVFSLFGNVLVCHVIFKNQRMHSATSLFIVNLAVADIMITLLNTPFTLVRFVNSTWIF 139
Query: 122 GHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDAKLAIVGIAFSWIWSA 181
G MC + + +L I+ +R V+ P R ++ IA W +
Sbjct: 140 GKGMCHVSRFAQYCSLHVSALTLTAIAVDRHQVIMHPL-KPRISITKGVIYIAVIWTMAT 198
Query: 182 VWTAP-----PIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIM 236
++ P +F + +Y +++ C PD F + + + + I+PL II
Sbjct: 199 FFSLPHAICQKLFTF-KYSEDIVRSLCLPD-FPEPADLFWKYLDLATFILLYILPLLIIS 256
Query: 237 LCYLQV----WLAIRAVAKQQKESESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAA 292
+ Y +V WL ++ + ++ +K+ +M+++++ + +CW P + +
Sbjct: 257 VAYARVAKKLWLCNMIGDVTTEQYFALRRKKKKTIKMLMLVVVLFALCWFPLNCYVLLLS 316
Query: 293 ANPGYAFHPLMAALPAYFAKSATIYNPVIYVFMNRQFR 330
+ + L A +FA S+T YNP IY ++N FR
Sbjct: 317 SKVIRTNNALYFAF-HWFAMSSTCYNPFIYCWLNENFR 353
>gi|4557859 somatostatin receptor 2 [Homo sapiens]
Length = 369
Score = 80.1 bits (196), Expect = 3e-15
Identities = 90/374 (24%), Positives = 163/374 (43%), Gaps = 48/374 (12%)
Query: 10 LAGRHPQDSYEDSTQSSIFTYTNSNSTRGPFEGPNYHIAPRWVYHLTSVWMIFVVTASVF 69
L G H S S+ + SN T P Y + V LT ++ + V +
Sbjct: 8 LNGSHTWLSIPFDLNGSVVSTNTSNQTE-----PYYDLTSNAV--LTFIYFV-VCIIGLC 59
Query: 70 TNGLVLAATMKFKKLRHPLNWILVNLAVAD----LAETVIASTISIVNQVSGYFVLGHPM 125
N LV+ +++ K++ N ++NLA+AD L +A +++V ++ G +
Sbjct: 60 GNTLVIYVILRYAKMKTITNIYILNLAIADELFMLGLPFLAMQVALV-----HWPFGKAI 114
Query: 126 CVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDAKLAIVGIAFSWIWSAVWTA 185
C + + T ++ L ++S +R+L V P + ++ I + ++
Sbjct: 115 CRVVMTVDGINQFTSIFCLTVMSIDRYLAVVHPIKSAKWRRPRTAKMITMAVWGVSLLVI 174
Query: 186 PPIFGW----SRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLCYLQ 241
PI + S W T P SG+ Y G Y +L ++PL II LCYL
Sbjct: 175 LPIMIYAGLRSNQWGRSSCTINWPGE-SGAWYTGFIIYTFILGF---LVPLTIICLCYLF 230
Query: 242 VWLAIRAVAKQQKESESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAANPGYAFHP 301
+ + +++ + S+ +K+EK+VTRMV +++ + CW P F F ++ A P
Sbjct: 231 IIIKVKSSGIRVGSSKR-KKSEKKVTRMVSIVVAVFIFCWLP---FYIFNVSSVSMAISP 286
Query: 302 LMAALPAY-------FAKSATIYNPVIYVFMNRQFRN------CILQLFGKKVDDGSELS 348
A + +A S NP++Y F++ F+ C++++ G DDG
Sbjct: 287 TPALKGMFDFVVVLTYANSCA--NPILYAFLSDNFKKSFQNVLCLVKVSG--TDDGER-- 340
Query: 349 SASKTEVSSVSSVS 362
S SK + S ++ +
Sbjct: 341 SDSKQDKSRLNETT 354
>gi|223633986 trace amine associated receptor 5 [Homo sapiens]
Length = 337
Score = 80.1 bits (196), Expect = 3e-15
Identities = 69/295 (23%), Positives = 130/295 (44%), Gaps = 12/295 (4%)
Query: 52 VYHLTSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISI 111
+Y + M+ +V +VF V A FK L P N++L++LA+AD+ ++ +S
Sbjct: 37 IYLACAAGMLIIVLGNVF----VAFAVSYFKALHTPTNFLLLSLALADMFLGLLVLPLST 92
Query: 112 VNQVSGYFVLGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKP-FGNVRFDAKLAI 170
+ V + G +C L Y +L +T ++ L IS +R +C P +F ++A+
Sbjct: 93 IRSVESCWFFGDFLCRLHTYLDTLFCLTSIFHLCFISIDRHCAICDPLLYPSKFTVRVAL 152
Query: 171 VGIAFSWIWSAVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCII 230
I W A +T+ +F ++ L GS + + L +
Sbjct: 153 RYILAGWGVPAAYTS--LFLYTDVVETRLSQWLEEMPCVGSCQLLLNKFWGWLNFPLFFV 210
Query: 231 PLAIIMLCYLQVWLAIRAVAKQ----QKESESTQKAEKEVTRMVVVMIFAYCVCWGPYTF 286
P I++ Y+++++ A+Q K K E++ + + + + Y +CW P+T
Sbjct: 211 PCLIMISLYVKIFVVATRQAQQITTLSKSLAGAAKHERKAAKTLGIAVGIYLLCWLPFT- 269
Query: 287 FACFAAANPGYAFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCILQLFGKKV 341
+ + PL+ + +FA + NP+IYVF + FR + +KV
Sbjct: 270 IDTMVDSLLHFITPPLVFDIFIWFAYFNSACNPIIYVFSYQWFRKALKLTLSQKV 324
>gi|4557865 somatostatin receptor 5 [Homo sapiens]
Length = 364
Score = 79.0 bits (193), Expect = 6e-15
Identities = 77/304 (25%), Positives = 137/304 (45%), Gaps = 23/304 (7%)
Query: 55 LTSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISIVNQ 114
L V + V A + N LV+ ++F K++ N ++NLAVAD+ + ++ N
Sbjct: 42 LVPVLYLLVCAAGLGGNTLVIYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQNA 101
Query: 115 VSGYFVLGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDA-KLAIVGI 173
S ++ G +C L + T ++ L ++S +R+L V P + R+ ++A +
Sbjct: 102 AS-FWPFGPVLCRLVMTLDGVNQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLAS 160
Query: 174 AFSWIWSAVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLA 233
A +W+ S + P + ++ G + P+ + V ++I V PL
Sbjct: 161 AAAWVLSLCMSLP-LLVFADVQEGGTCNASWPEPVG--LWGAV--FIIYTAVLGFFAPLL 215
Query: 234 IIMLCYLQVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAA 293
+I LCYL + + +RA + +++E++VTRMV+V++ + CW P F
Sbjct: 216 VICLCYLLIVVKVRAAGV--RVGCVRRRSERKVTRMVLVVVLVFAGCWLP---FFTVNIV 270
Query: 294 NPGYAFHPLMAALPAYFAKSATIY-----NPVIYVFMNRQFRN------CILQLFGKKVD 342
N A A+ YF Y NPV+Y F++ FR C+ + G K
Sbjct: 271 NLAVALPQEPASAGLYFFVVILSYANSCANPVLYGFLSDNFRQSFQKVLCLRKGSGAKDA 330
Query: 343 DGSE 346
D +E
Sbjct: 331 DATE 334
>gi|223718055 opioid receptor, mu 1 isoform MOR-1H [Homo sapiens]
Length = 493
Score = 79.0 bits (193), Expect = 6e-15
Identities = 67/276 (24%), Positives = 124/276 (44%), Gaps = 13/276 (4%)
Query: 63 VVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISI--VNQVSGYFV 120
V +F N LV+ +++ K++ N + NLA+AD T ST+ VN + G +
Sbjct: 173 VCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALAT---STLPFQSVNYLMGTWP 229
Query: 121 LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDA--KLAIVGIAFSWI 178
G +C + T +++L +S +R++ VC P + F I+ + +WI
Sbjct: 230 FGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIINVC-NWI 288
Query: 179 WSAVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLC 238
S+ P +F + + G C FS ++ I + + I+P+ II +C
Sbjct: 289 LSSAIGLPVMFMATTKYRQG-SIDCTL-TFSHPTWYWENLLKICVFIFAFIMPVLIITVC 346
Query: 239 YLQVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAA--ANPG 296
Y + L +++V + S+ + + +TRMV+V++ + VCW P + A P
Sbjct: 347 YGLMILRLKSV-RMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALVTIPE 405
Query: 297 YAFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNC 332
F + + + NPV+Y F++ F+ C
Sbjct: 406 TTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRC 441
>gi|117940060 opioid receptor, mu 1 isoform MOR-1 [Homo sapiens]
Length = 400
Score = 79.0 bits (193), Expect = 6e-15
Identities = 67/276 (24%), Positives = 124/276 (44%), Gaps = 13/276 (4%)
Query: 63 VVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISI--VNQVSGYFV 120
V +F N LV+ +++ K++ N + NLA+AD T ST+ VN + G +
Sbjct: 80 VCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALAT---STLPFQSVNYLMGTWP 136
Query: 121 LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDA--KLAIVGIAFSWI 178
G +C + T +++L +S +R++ VC P + F I+ + +WI
Sbjct: 137 FGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIINVC-NWI 195
Query: 179 WSAVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLC 238
S+ P +F + + G C FS ++ I + + I+P+ II +C
Sbjct: 196 LSSAIGLPVMFMATTKYRQG-SIDCTL-TFSHPTWYWENLLKICVFIFAFIMPVLIITVC 253
Query: 239 YLQVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAA--ANPG 296
Y + L +++V + S+ + + +TRMV+V++ + VCW P + A P
Sbjct: 254 YGLMILRLKSV-RMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALVTIPE 312
Query: 297 YAFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNC 332
F + + + NPV+Y F++ F+ C
Sbjct: 313 TTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRC 348
>gi|223718712 opioid receptor, mu 1 isoform MOR-1B5 [Homo sapiens]
Length = 420
Score = 79.0 bits (193), Expect = 6e-15
Identities = 67/276 (24%), Positives = 124/276 (44%), Gaps = 13/276 (4%)
Query: 63 VVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISI--VNQVSGYFV 120
V +F N LV+ +++ K++ N + NLA+AD T ST+ VN + G +
Sbjct: 80 VCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALAT---STLPFQSVNYLMGTWP 136
Query: 121 LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDA--KLAIVGIAFSWI 178
G +C + T +++L +S +R++ VC P + F I+ + +WI
Sbjct: 137 FGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIINVC-NWI 195
Query: 179 WSAVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLC 238
S+ P +F + + G C FS ++ I + + I+P+ II +C
Sbjct: 196 LSSAIGLPVMFMATTKYRQG-SIDCTL-TFSHPTWYWENLLKICVFIFAFIMPVLIITVC 253
Query: 239 YLQVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAA--ANPG 296
Y + L +++V + S+ + + +TRMV+V++ + VCW P + A P
Sbjct: 254 YGLMILRLKSV-RMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALVTIPE 312
Query: 297 YAFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNC 332
F + + + NPV+Y F++ F+ C
Sbjct: 313 TTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRC 348
>gi|223718719 opioid receptor, mu 1 isoform MOR-1B2 [Homo sapiens]
Length = 397
Score = 79.0 bits (193), Expect = 6e-15
Identities = 67/276 (24%), Positives = 124/276 (44%), Gaps = 13/276 (4%)
Query: 63 VVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISI--VNQVSGYFV 120
V +F N LV+ +++ K++ N + NLA+AD T ST+ VN + G +
Sbjct: 80 VCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALAT---STLPFQSVNYLMGTWP 136
Query: 121 LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDA--KLAIVGIAFSWI 178
G +C + T +++L +S +R++ VC P + F I+ + +WI
Sbjct: 137 FGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIINVC-NWI 195
Query: 179 WSAVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLC 238
S+ P +F + + G C FS ++ I + + I+P+ II +C
Sbjct: 196 LSSAIGLPVMFMATTKYRQG-SIDCTL-TFSHPTWYWENLLKICVFIFAFIMPVLIITVC 253
Query: 239 YLQVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAA--ANPG 296
Y + L +++V + S+ + + +TRMV+V++ + VCW P + A P
Sbjct: 254 YGLMILRLKSV-RMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALVTIPE 312
Query: 297 YAFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNC 332
F + + + NPV+Y F++ F+ C
Sbjct: 313 TTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRC 348
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.135 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,641,257
Number of Sequences: 37866
Number of extensions: 557962
Number of successful extensions: 2965
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 303
Number of HSP's that attempted gapping in prelim test: 1977
Number of HSP's gapped (non-prelim): 749
length of query: 364
length of database: 18,247,518
effective HSP length: 104
effective length of query: 260
effective length of database: 14,309,454
effective search space: 3720458040
effective search space used: 3720458040
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.