RRH 33387

Name: RRH	Sequence: fasta or formatted (337aa)		NCBI GI: 5730019
Description: peropsin		Referenced in: Photoreceptors and Related Functions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 25 2 C cysteine 2.7 9 1 D aspartate 4.2 14 1 E glutamate 1.2 4 1 F phenylalanine 4.5 15 2 G glycine 5.9 20 1 H histidine 1.5 5 2 I isoleucine 11.0 37 3 K lysine 3.9 13 2 L leucine 7.4 25 2 M methionine 5.0 17 1 N asparagine 5.3 18 2 P proline 5.0 17 3 Q glutamine 1.8 6 1 R arginine 3.3 11 2 S serine 8.6 29 2 T threonine 7.4 25 2 V valine 6.8 23 2 W tryptophan 2.4 8 1 Y tyrosine 4.7 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 peropsin OPN4 0.221 opsin 4 isoform 1 OPN5 0.214 opsin 5 isoform 1 OPN3 0.214 opsin 3 OPN4 0.209 opsin 4 isoform 2 RHO 0.202 rhodopsin OPN1MW2 0.179 opsin 1 (cone pigments), medium-wave-sensitive 2 [H... OPN1MW 0.179 opsin 1 (cone pigments), medium-wave-sensitive OPN1LW 0.176 opsin 1 (cone pigments), long-wave-sensitive RGR 0.161 retinal G-protein coupled receptor isoform 2 RGR 0.155 retinal G-protein coupled receptor isoform 1 RGR 0.133 retinal G-protein coupled receptor isoform 3 TACR1 0.131 tachykinin receptor 1 isoform long TACR2 0.127 tachykinin receptor 2 OPN1SW 0.123 opsin 1 (cone pigments), short-wave-sensitive TACR3 0.122 tachykinin receptor 3 TACR1 0.119 tachykinin receptor 1 isoform short NPY2R 0.116 neuropeptide Y receptor Y2 SSTR2 0.113 somatostatin receptor 2 OPRK1 0.104 opioid receptor, kappa 1 HTR4 0.104 serotonin 5-HT4 receptor isoform n HTR4 0.104 serotonin 5-HT4 receptor isoform i HTR4 0.104 serotonin 5-HT4 receptor isoform d HTR4 0.104 serotonin 5-HT4 receptor isoform a HTR4 0.104 serotonin 5-HT4 receptor isoform g HTR4 0.104 serotonin 5-HT4 receptor isoform b MTNR1A 0.104 melatonin receptor 1A GPR50 0.104 G protein-coupled receptor 50 OPN5 0.102 opsin 5 isoform 2 HTR7 0.101 5-hydroxytryptamine receptor 7 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.