Guide to the Human Genome
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Name: HTR7 Sequence: fasta or formatted (479aa) NCBI GI: 10880129
Description:

5-hydroxytryptamine receptor 7 isoform d

Referenced in:

Serotonin

Other entries for this name:
alt prot [432aa] 5-hydroxytryptamine receptor 7 isoform b
alt prot [445aa] 5-hydroxytryptamine receptor 7 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         37           2
 C cysteine            3.3         16           2
 D aspartate           4.0         19           2
 E glutamate           3.5         17           2
 F phenylalanine       4.8         23           2
 G glycine             5.4         26           2
 H histidine           1.9          9           2
 I isoleucine          6.7         32           2
 K lysine              4.8         23           2
 L leucine            11.3         54           2
 M methionine          2.9         14           2
 N asparagine          3.8         18           1
 P proline             6.3         30           2
 Q glutamine           2.3         11           1
 R arginine            5.6         27           2
 S serine              7.1         34           2
 T threonine           5.0         24           2
 V valine              8.4         40           2
 W tryptophan          2.1         10           1
 Y tyrosine            3.1         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   5-hydroxytryptamine receptor 7 isoform d 
HTR7                  0.897   5-hydroxytryptamine receptor 7 isoform a 
HTR7                  0.896   5-hydroxytryptamine receptor 7 isoform b 
ADRA1B                0.211   alpha-1B-adrenergic receptor 
HTR1A                 0.209   5-hydroxytryptamine (serotonin) receptor 1A 
ADRA1A                0.206   alpha-1A-adrenergic receptor isoform 4 
ADRA1A                0.206   alpha-1A-adrenergic receptor isoform 1 
ADRA1A                0.206   alpha-1A-adrenergic receptor isoform 2 
ADRA1A                0.206   alpha-1A-adrenergic receptor isoform 3 
HTR1F                 0.205   5-hydroxytryptamine (serotonin) receptor 1F 
HTR1D                 0.204   5-hydroxytryptamine (serotonin) receptor 1D 
HTR1B                 0.200   5-hydroxytryptamine (serotonin) receptor 1B 
HTR1E                 0.199   5-hydroxytryptamine (serotonin) receptor 1E 
ADRA1D                0.197   alpha-1D-adrenergic receptor 
HTR5A                 0.188   5-hydroxytryptamine receptor 5A 
ADRB1                 0.180   beta-1-adrenergic receptor 
HTR4                  0.179   serotonin 5-HT4 receptor isoform n 
HTR4                  0.179   serotonin 5-HT4 receptor isoform i 
HTR4                  0.179   serotonin 5-HT4 receptor isoform d 
HTR4                  0.179   serotonin 5-HT4 receptor isoform a 
HTR4                  0.179   serotonin 5-HT4 receptor isoform g 
HTR4                  0.179   serotonin 5-HT4 receptor isoform b 
DRD3                  0.174   dopamine receptor D3 isoform e 
HTR4                  0.172   serotonin 5-HT4 receptor isoform hb 
DRD1                  0.170   dopamine receptor D1 
DRD3                  0.167   dopamine receptor D3 isoform a 
HRH2                  0.167   histamine receptor H2 isoform 1 
HRH2                  0.167   histamine receptor H2 isoform 2 
ADRB3                 0.160   adrenergic, beta-3-, receptor 
HTR2A                 0.160   5-hydroxytryptamine (serotonin) receptor 2A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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