Guide to the Human Genome
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Name: TAAR5 Sequence: fasta or formatted (337aa) NCBI GI: 223633986
Description:

trace amine associated receptor 5

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         28           2
 C cysteine            4.2         14           1
 D aspartate           3.0         10           1
 E glutamate           2.4          8           2
 F phenylalanine       8.6         29           2
 G glycine             4.2         14           1
 H histidine           2.4          8           1
 I isoleucine          6.8         23           2
 K lysine              3.3         11           1
 L leucine            14.8         50           3
 M methionine          1.8          6           1
 N asparagine          2.1          7           1
 P proline             4.5         15           2
 Q glutamine           3.6         12           2
 R arginine            3.6         12           1
 S serine              5.9         20           1
 T threonine           6.5         22           2
 V valine              7.7         26           2
 W tryptophan          2.4          8           1
 Y tyrosine            4.2         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   trace amine associated receptor 5 
TAAR9                 0.437   trace amine associated receptor 9 
TAAR8                 0.422   trace amine associated receptor 8 
TAAR6                 0.419   trace amine associated receptor 6 
TAAR2                 0.390   trace amine associated receptor 2 isoform 1 
TAAR2                 0.369   trace amine associated receptor 2 isoform 2 
TAAR1                 0.353   trace amine associated receptor 1 
HTR4                  0.210   serotonin 5-HT4 receptor isoform n 
HTR4                  0.210   serotonin 5-HT4 receptor isoform i 
HTR4                  0.210   serotonin 5-HT4 receptor isoform d 
HTR4                  0.210   serotonin 5-HT4 receptor isoform a 
HTR4                  0.210   serotonin 5-HT4 receptor isoform g 
HTR4                  0.210   serotonin 5-HT4 receptor isoform b 
HTR4                  0.204   serotonin 5-HT4 receptor isoform hb 
HRH2                  0.195   histamine receptor H2 isoform 1 
HRH2                  0.195   histamine receptor H2 isoform 2 
ADRA1B                0.188   alpha-1B-adrenergic receptor 
ADRA1A                0.186   alpha-1A-adrenergic receptor isoform 4 
ADRA1A                0.186   alpha-1A-adrenergic receptor isoform 1 
ADRA1A                0.186   alpha-1A-adrenergic receptor isoform 2 
ADRA1A                0.186   alpha-1A-adrenergic receptor isoform 3 
HTR6                  0.171   5-hydroxytryptamine (serotonin) receptor 6 
DRD1                  0.171   dopamine receptor D1 
HTR1D                 0.168   5-hydroxytryptamine (serotonin) receptor 1D 
ADRB1                 0.168   beta-1-adrenergic receptor 
ADRB2                 0.167   adrenergic, beta-2-, receptor, surface 
HTR1B                 0.161   5-hydroxytryptamine (serotonin) receptor 1B 
DRD5                  0.161   dopamine receptor D5 
HTR7                  0.156   5-hydroxytryptamine receptor 7 isoform b 
HTR7                  0.156   5-hydroxytryptamine receptor 7 isoform d 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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