Guide to the Human Genome
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Name: SSTR5 Sequence: fasta or formatted (364aa) NCBI GI: 4557865
Description:

somatostatin receptor 5

Referenced in:

Growth Hormone and Related Hormones
Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.4         45           3
 C cysteine            3.0         11           1
 D aspartate           2.5          9           1
 E glutamate           1.9          7           1
 F phenylalanine       5.2         19           2
 G glycine             6.9         25           3
 H histidine           0.5          2           1
 I isoleucine          2.7         10           2
 K lysine              2.5          9           1
 L leucine            12.9         47           2
 M methionine          2.2          8           1
 N asparagine          3.8         14           1
 P proline             6.6         24           2
 Q glutamine           2.7         10           3
 R arginine            6.0         22           3
 S serine              6.3         23           2
 T threonine           4.4         16           1
 V valine             12.6         46           3
 W tryptophan          1.9          7           1
 Y tyrosine            2.7         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   somatostatin receptor 5 
SSTR3                 0.520   somatostatin receptor 3 
SSTR2                 0.509   somatostatin receptor 2 
SSTR4                 0.452   somatostatin receptor 4 
SSTR1                 0.427   somatostatin receptor 1 
NPBWR2                0.308   neuropeptides B/W receptor 2 
OPRM1                 0.302   opioid receptor, mu 1 isoform MOR-1H 
OPRM1                 0.302   opioid receptor, mu 1 isoform MOR-1 
OPRM1                 0.302   opioid receptor, mu 1 isoform MOR-1B5 
OPRM1                 0.302   opioid receptor, mu 1 isoform MOR-1B2 
OPRM1                 0.302   opioid receptor, mu 1 isoform MOR-1B3 
OPRM1                 0.302   opioid receptor, mu 1 isoform MOR-1B1 
OPRM1                 0.302   opioid receptor, mu 1 isoform MOR-1A 
OPRM1                 0.302   opioid receptor, mu 1 isoform MOR-1B4 
OPRM1                 0.302   opioid receptor, mu 1 isoform MOR-1O 
OPRM1                 0.302   opioid receptor, mu 1 isoform MOR-1X 
OPRL1                 0.302   opiate receptor-like 1 
OPRL1                 0.302   opiate receptor-like 1 
OPRD1                 0.288   opioid receptor, delta 1 
OPRK1                 0.281   opioid receptor, kappa 1 
NPBWR1                0.278   G protein-coupled receptor 7 
OPRM1                 0.261   opioid receptor, mu 1 isoform MOR-1G2 
OPRM1                 0.254   opioid receptor, mu 1 isoform MOR-1G1 
OPRM1                 0.254   opioid receptor, mu 1 isoform MOR1-K1 
MCHR1                 0.218   G protein-coupled receptor 24 
GALR1                 0.209   galanin receptor 1 
GALR2                 0.202   galanin receptor 2 
APLNR                 0.201   apelin receptor 
KISS1R                0.201   G protein-coupled receptor 54 
MCHR2                 0.201   melanin-concentrating hormone receptor 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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