CC2D1A 37680

Name: CC2D1A	Sequence: fasta or formatted (951aa)		NCBI GI: 96974985
Description: coiled-coil and C2 domain containing 1A		Referenced in: Coiled-Coil Proteins NF-kappaB Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.1 106 4 C cysteine 0.7 7 1 D aspartate 5.3 50 3 E glutamate 8.1 77 3 F phenylalanine 2.4 23 1 G glycine 6.3 60 2 H histidine 1.3 12 1 I isoleucine 3.2 30 1 K lysine 6.0 57 2 L leucine 9.9 94 2 M methionine 1.8 17 1 N asparagine 2.1 20 1 P proline 11.0 105 4 Q glutamine 6.8 65 3 R arginine 7.7 73 2 S serine 4.7 45 2 T threonine 5.0 48 3 V valine 5.0 48 2 W tryptophan 0.2 2 1 Y tyrosine 1.3 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil and C2 domain containing 1A CC2D1B 0.367 coiled-coil and C2 domain containing 1B NACA 0.020 nascent polypeptide-associated complex alpha subuni... PCLO 0.018 piccolo isoform 2 PCLO 0.018 piccolo isoform 1 MYPOP 0.017 Myb protein P42POP FLJ22184 0.017 PREDICTED: hypothetical protein LOC80164 CIC 0.016 capicua homolog BAT2 0.016 HLA-B associated transcript-2 SAMD1 0.016 sterile alpha motif domain containing 1 PRR12 0.016 proline rich 12 AAK1 0.016 AP2 associated kinase 1 CCNK 0.016 cyclin K isoform 1 MAP7D1 0.016 MAP7 domain containing 1 SF3B2 0.015 splicing factor 3B subunit 2 PRG4 0.015 proteoglycan 4 isoform D PRG4 0.015 proteoglycan 4 isoform C PRG4 0.015 proteoglycan 4 isoform B PRG4 0.015 proteoglycan 4 isoform A RAPH1 0.015 Ras association and pleckstrin homology domains 1 is... C2orf55 0.015 hypothetical protein LOC343990 CASKIN1 0.014 CASK interacting protein 1 FLJ22184 0.014 PREDICTED: hypothetical protein FLJ22184 TCOF1 0.014 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.014 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.014 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.014 Treacher Collins-Franceschetti syndrome 1 isoform b ... TCOF1 0.014 Treacher Collins-Franceschetti syndrome 1 isoform a ... TCOF1 0.014 Treacher Collins-Franceschetti syndrome 1 isoform c ... YLPM1 0.014 YLP motif containing 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.