BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|9506713 nucleolar protein family A, member 1 [Homo sapiens] (217 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|15011916 nucleolar protein family A, member 1 [Homo sapiens] 473 e-134 gi|9506713 nucleolar protein family A, member 1 [Homo sapiens] 473 e-134 gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma... 87 1e-17 gi|109452587 family with sequence similarity 98, member B isofor... 81 8e-16 gi|12056465 fibrillarin [Homo sapiens] 71 6e-13 gi|253970504 Ewing sarcoma breakpoint region 1 isoform 4 [Homo s... 70 1e-12 gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo sap... 70 1e-12 gi|55956788 nucleolin [Homo sapiens] 69 2e-12 gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo s... 68 7e-12 gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo s... 68 7e-12 gi|119395750 keratin 1 [Homo sapiens] 64 8e-11 gi|34740329 heterogeneous nuclear ribonucleoprotein A3 [Homo sap... 61 8e-10 gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens] 60 1e-09 gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens] 60 1e-09 gi|195972866 keratin 10 [Homo sapiens] 60 1e-09 gi|47132620 keratin 2 [Homo sapiens] 60 1e-09 gi|100913206 DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Homo sapi... 59 2e-09 gi|55956899 keratin 9 [Homo sapiens] 59 4e-09 gi|131412228 keratin 13 isoform b [Homo sapiens] 57 9e-09 gi|131412225 keratin 13 isoform a [Homo sapiens] 57 9e-09 gi|5803036 heterogeneous nuclear ribonucleoprotein A0 [Homo sapi... 57 9e-09 gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1 iso... 57 1e-08 gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1 iso... 57 1e-08 gi|56699482 hypothetical protein LOC25940 [Homo sapiens] 57 1e-08 gi|110347449 POU domain, class 4, transcription factor 1 [Homo s... 57 1e-08 gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 57 1e-08 gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 57 1e-08 gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 57 1e-08 gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo ... 57 2e-08 gi|109148552 keratin 3 [Homo sapiens] 57 2e-08 >gi|15011916 nucleolar protein family A, member 1 [Homo sapiens] Length = 217 Score = 473 bits (1216), Expect = e-134 Identities = 217/217 (100%), Positives = 217/217 (100%) Query: 1 MSFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK 60 MSFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK Sbjct: 1 MSFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK 60 Query: 61 GQDQGPPERVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVDEIFGQL 120 GQDQGPPERVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVDEIFGQL Sbjct: 61 GQDQGPPERVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVDEIFGQL 120 Query: 121 RDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGEKGPPRGGGRGGRGGGR 180 RDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGEKGPPRGGGRGGRGGGR Sbjct: 121 RDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGEKGPPRGGGRGGRGGGR 180 Query: 181 GGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRGH 217 GGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRGH Sbjct: 181 GGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRGH 217 >gi|9506713 nucleolar protein family A, member 1 [Homo sapiens] Length = 217 Score = 473 bits (1216), Expect = e-134 Identities = 217/217 (100%), Positives = 217/217 (100%) Query: 1 MSFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK 60 MSFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK Sbjct: 1 MSFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK 60 Query: 61 GQDQGPPERVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVDEIFGQL 120 GQDQGPPERVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVDEIFGQL Sbjct: 61 GQDQGPPERVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVDEIFGQL 120 Query: 121 RDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGEKGPPRGGGRGGRGGGR 180 RDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGEKGPPRGGGRGGRGGGR Sbjct: 121 RDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGEKGPPRGGGRGGRGGGR 180 Query: 181 GGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRGH 217 GGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRGH Sbjct: 181 GGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRGH 217 >gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma) [Homo sapiens] Length = 526 Score = 86.7 bits (213), Expect = 1e-17 Identities = 88/255 (34%), Positives = 108/255 (42%), Gaps = 65/255 (25%) Query: 1 MSFRGGGRGGFNR-----GGGGGGF---NRGGSSNHFRGGGGGGGGGNF----------- 41 MS GG GG+ GGG GG+ +RGG GGGGGGGGG + Sbjct: 184 MSSGGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGGGGGGGGGYNRSSGGYEPRG 243 Query: 42 RGGGRGGFGRGGG--RGGFNK---GQDQGPPERVVLLGEFLHPCEDDIVCKCT------- 89 RGGGRGG G GG RGGFNK +DQG H E D T Sbjct: 244 RGGGRGGRGGMGGSDRGGFNKFGGPRDQGSR----------HDSEQDNSDNNTIFVQGLG 293 Query: 90 ---TDENKVPYFNAPVYLENKEQIGK------VDEIFGQLRDFYFSVKLSENMKASSFKK 140 T E+ YF ++ ++ G+ D G+L+ +S + S+ Sbjct: 294 ENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKG---EATVSFDDPPSAKAA 350 Query: 141 LQKFYIDPYKLLPLQ-RFLPRPPGEKGPPRGGGRGGRGGGRGGGGRGG--GRGGGFRGGR 197 + F + P++ F R R G G GRGG GRGG GRGG GG Sbjct: 351 IDWFDGKEFSGNPIKVSFATR--------RADFNRGGGNGRGGRGRGGPMGRGGYGGGGS 402 Query: 198 GGGG-GGFRGGRGGG 211 GGGG GGF G GGG Sbjct: 403 GGGGRGGFPSGGGGG 417 Score = 77.8 bits (190), Expect = 7e-15 Identities = 83/275 (30%), Positives = 103/275 (37%), Gaps = 89/275 (32%) Query: 6 GGRGGFNRGGGGGGF----------------------------------NRGGSSNHFRG 31 GG GG GGGGG + +RGG G Sbjct: 166 GGGGG---GGGGGNYGQDQSSMSSGGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSG 222 Query: 32 GGGGGGGGNF-----------RGGGRGGFGRGGG--RGGFNK---GQDQGPPERVVLLGE 75 GGGGGGGG + RGGGRGG G GG RGGFNK +DQG Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGGPRDQGS--------- 273 Query: 76 FLHPCEDDIVCKCT----------TDENKVPYFNAPVYLENKEQIGK------VDEIFGQ 119 H E D T T E+ YF ++ ++ G+ D G+ Sbjct: 274 -RHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGK 332 Query: 120 LRDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGEKGPPRGGGRGGRG-- 177 L+ +S + S+ + F + P++ + G GRGGRG Sbjct: 333 LKG---EATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRG 389 Query: 178 -----GGRGGGGRGGGRGGGFRGGRGGGGGGFRGG 207 GG GGGG GGG GGF G GGGGG R G Sbjct: 390 GPMGRGGYGGGGSGGGGRGGFPSGGGGGGGQQRAG 424 Score = 53.9 bits (128), Expect = 1e-07 Identities = 34/67 (50%), Positives = 35/67 (52%), Gaps = 16/67 (23%) Query: 163 GEKGPPRGGGRGGRG----GGRGGGGRGGGRGGGFRG-----------GRGGGGGGFRGG 207 G + GGG GG G GGRG GG GGG GGG G GRGGG GG RGG Sbjct: 195 GNQDQSGGGGSGGYGQQDRGGRGRGGSGGGGGGGGGGYNRSSGGYEPRGRGGGRGG-RGG 253 Query: 208 RGGGFRG 214 GG RG Sbjct: 254 MGGSDRG 260 Score = 53.9 bits (128), Expect = 1e-07 Identities = 31/58 (53%), Positives = 34/58 (58%), Gaps = 3/58 (5%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQ 62 GGG GG + GG G RGG + RGG G GG RGG RGG G GG RGGF G+ Sbjct: 456 GGGPGGSHMGGNYGDDRRGGRGGYDRGGYRGRGGD--RGGFRGGRG-GGDRGGFGPGK 510 Score = 53.5 bits (127), Expect = 1e-07 Identities = 35/61 (57%), Positives = 37/61 (60%), Gaps = 14/61 (22%) Query: 169 RGG-GRGGRGGGRGGGGRG----------GGRGGGFRGGRGGGGGGFRGG--RGGGFRGR 215 RGG GRGG GGG GGGG G GRGGG RGGRGG GG RGG + GG R + Sbjct: 213 RGGRGRGGSGGGGGGGGGGYNRSSGGYEPRGRGGG-RGGRGGMGGSDRGGFNKFGGPRDQ 271 Query: 216 G 216 G Sbjct: 272 G 272 Score = 48.9 bits (115), Expect = 3e-06 Identities = 32/84 (38%), Positives = 39/84 (46%), Gaps = 24/84 (28%) Query: 5 GGGRGGFNRGGGGGG-------------------FNRGGSSNHFRG----GGGGGGGGNF 41 GGGRGGF GGGGGG F+ N + G GGG GG+ Sbjct: 404 GGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSH 463 Query: 42 RGGGRGGFGRGGGRGGFNKGQDQG 65 GG G R GGRGG+++G +G Sbjct: 464 MGGNYGD-DRRGGRGGYDRGGYRG 486 Score = 48.5 bits (114), Expect = 4e-06 Identities = 40/119 (33%), Positives = 44/119 (36%), Gaps = 57/119 (47%) Query: 4 RGG-GRGG-FNRGGGGGGFNRGGSSNHFRGGGGGGGG----------------------- 38 RGG GRGG RGG GGG + GG F GGGGGGG Sbjct: 383 RGGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRN 442 Query: 39 --------------------------GNFRGGGRGGF------GRGGGRGGFNKGQDQG 65 G+ R GGRGG+ GRGG RGGF G+ G Sbjct: 443 ECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRGGYRGRGGDRGGFRGGRGGG 501 Score = 47.8 bits (112), Expect = 7e-06 Identities = 32/66 (48%), Positives = 33/66 (50%), Gaps = 19/66 (28%) Query: 170 GGGRGGRGGGR---GGGGRGG---------GRGGGFRGGRGGGGGGFRG-------GRGG 210 GGG GG G + GGGG GG GRGG GG GGGGG R GRGG Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGGGGGGGGGYNRSSGGYEPRGRGG 246 Query: 211 GFRGRG 216 G GRG Sbjct: 247 GRGGRG 252 Score = 47.0 bits (110), Expect = 1e-05 Identities = 29/50 (58%), Positives = 29/50 (58%), Gaps = 3/50 (6%) Query: 163 GEKGPPRGGGRGG--RGGGRG-GGGRGGGRGGGFRGGRGGGGGGFRGGRG 209 G G R GGRGG RGG RG GG RGG RGG G RGG G G RG Sbjct: 466 GNYGDDRRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRG 515 Score = 46.6 bits (109), Expect = 2e-05 Identities = 29/60 (48%), Positives = 31/60 (51%), Gaps = 14/60 (23%) Query: 170 GGGRGGRGGGR---------GGGGRGGGRGGGFRGGRGGGGGGF----RGGRGGGFRGRG 216 GGG GG GGG GGG GGG G + G GGG GG+ RGGRG G G G Sbjct: 166 GGGGGGGGGGNYGQDQSSMSSGGGSGGGYGNQDQSG-GGGSGGYGQQDRGGRGRGGSGGG 224 Score = 45.8 bits (107), Expect = 3e-05 Identities = 36/95 (37%), Positives = 40/95 (42%), Gaps = 45/95 (47%) Query: 167 PPRGGGR-------GGRGGGRGGGGR----------GGGRGGGF---------------- 193 PP+G G+ G GGG GGGG GGG GGG+ Sbjct: 151 PPQGYGQQNQYNSSSGGGGGGGGGGNYGQDQSSMSSGGGSGGGYGNQDQSGGGGSGGYGQ 210 Query: 194 --RGGRG-GGGGGFRGGRGGGF---------RGRG 216 RGGRG GG GG GG GGG+ RGRG Sbjct: 211 QDRGGRGRGGSGGGGGGGGGGYNRSSGGYEPRGRG 245 Score = 45.4 bits (106), Expect = 4e-05 Identities = 26/49 (53%), Positives = 28/49 (57%), Gaps = 11/49 (22%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRG 52 R GGRGG++RGG G RGG FRGG G GG RGGFG G Sbjct: 472 RRGGRGGYDRGGYRG---RGGDRGGFRGGRG--------GGDRGGFGPG 509 Score = 42.7 bits (99), Expect = 2e-04 Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQ 64 G + +N G G N+ SS+ GGGGGGGGG G + GGG GG QDQ Sbjct: 144 GQQQSYNPPQGYGQQNQYNSSS---GGGGGGGGGGNYGQDQSSMSSGGGSGGGYGNQDQ 199 >gi|109452587 family with sequence similarity 98, member B isoform 1 [Homo sapiens] Length = 433 Score = 80.9 bits (198), Expect = 8e-16 Identities = 37/51 (72%), Positives = 39/51 (76%) Query: 161 PPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGG 211 PP +K GGGRGG GGG GGGGRGGG GGG RGG GGGGGG+ GG GGG Sbjct: 323 PPWQKRQEGGGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGG 373 Score = 75.1 bits (183), Expect = 4e-14 Identities = 42/73 (57%), Positives = 47/73 (64%), Gaps = 4/73 (5%) Query: 148 PYKLLPLQRFLPRPPGEKGPPRGGGRGGRGGGRGGGGRGG-GRGGGFRGGRGGGGGGFRG 206 P ++ P Q+ G G GGG GGRGGG GGGGRGG G GGG GG GGGGGG+ G Sbjct: 319 PPEMPPWQKRQEGGGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGG 378 Query: 207 GRG---GGFRGRG 216 G G GGF+GRG Sbjct: 379 GGGGGRGGFQGRG 391 Score = 70.1 bits (170), Expect = 1e-12 Identities = 38/61 (62%), Positives = 39/61 (63%), Gaps = 5/61 (8%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQ 64 GGG GG RGGGGGG RGG + GGGGG GGG GGG GG G GGGRGGF D Sbjct: 339 GGGGGGGGRGGGGGGGGRGG----WGGGGGGWGGGGGGGGGWGG-GGGGGRGGFQGRGDY 393 Query: 65 G 65 G Sbjct: 394 G 394 Score = 68.9 bits (167), Expect = 3e-12 Identities = 35/58 (60%), Positives = 38/58 (65%), Gaps = 4/58 (6%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRG----GRGGGFRGRG 216 G G GGGRGG GGG GG G GGG GGG+ GG GGG GGF+G G GG+ GRG Sbjct: 346 GRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRG 403 Score = 68.9 bits (167), Expect = 3e-12 Identities = 36/65 (55%), Positives = 40/65 (61%), Gaps = 6/65 (9%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRG----GGRGGFGRGGGRGGFNK 60 GGGRGG+ GGGGGG+ GG GGGGGGG G F+G GGRGG+G GG GG Sbjct: 353 GGGRGGW--GGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGY 410 Query: 61 GQDQG 65 G G Sbjct: 411 GDPYG 415 Score = 55.5 bits (132), Expect = 4e-08 Identities = 34/65 (52%), Positives = 35/65 (53%), Gaps = 14/65 (21%) Query: 163 GEKGPPRGGGRGGRGGGRGG-------GGRGGGRGGGFRGGR-------GGGGGGFRGGR 208 G G GG GG GGGRGG GGRGG G G GGR GGGGGG GG Sbjct: 367 GGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGYGDPYGGGGGGGGGGGG 426 Query: 209 GGGFR 213 GGG+R Sbjct: 427 GGGYR 431 Score = 54.3 bits (129), Expect = 8e-08 Identities = 31/66 (46%), Positives = 34/66 (51%), Gaps = 10/66 (15%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNH----------FRGGGGGGGGGNFRGGGRGGFGRGGG 54 GGG GG GGGGG RGG RGG GG G G+ GGG GG G GGG Sbjct: 367 GGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGYGDPYGGGGGGGGGGGG 426 Query: 55 RGGFNK 60 GG+ + Sbjct: 427 GGGYRR 432 Score = 36.6 bits (83), Expect = 0.017 Identities = 18/28 (64%), Positives = 18/28 (64%) Query: 30 RGGGGGGGGGNFRGGGRGGFGRGGGRGG 57 R GGGG GG GGG GG G GGG GG Sbjct: 328 RQEGGGGRGGWGGGGGGGGRGGGGGGGG 355 >gi|12056465 fibrillarin [Homo sapiens] Length = 321 Score = 71.2 bits (173), Expect = 6e-13 Identities = 40/58 (68%), Positives = 40/58 (68%), Gaps = 11/58 (18%) Query: 168 PRGGGRGGRGG--------GRGGGGRGGGRGGGFRG-GRGGGGGGFRGGRGGGFRGRG 216 PRGGG GGRGG GRGG G G GRGGGFRG GRGGGGGG GG GGG RG G Sbjct: 7 PRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGG--GGGGGGGRGGG 62 Score = 65.5 bits (158), Expect = 3e-11 Identities = 48/122 (39%), Positives = 58/122 (47%), Gaps = 16/122 (13%) Query: 6 GGRGGFN-------RGGGGGGFNRGGS-SNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGG 57 GGRGGF RGG GGG RGG RGGGGGGGGG G G GGF GG RG Sbjct: 13 GGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGGNRGR 72 Query: 58 FNKGQDQGPPERVVLLGEFLHPCEDDIVCKCTTD----ENKVPYFNAPVYLENKEQIGKV 113 G+ + V++ H E +C+ D +N VP VY E + I + Sbjct: 73 GRGGKRGNQSGKNVMVEPHRH--EGVFICRGKEDALVTKNLVP--GESVYGEKRVSISEG 128 Query: 114 DE 115 D+ Sbjct: 129 DD 130 Score = 61.2 bits (147), Expect = 6e-10 Identities = 42/74 (56%), Positives = 42/74 (56%), Gaps = 17/74 (22%) Query: 157 FLPRPPGEKGPPRGG-----GRGGRGG-----GRGGG----GRGGGRGGGFRGGRGGGGG 202 F PR G G RGG GRGGRGG GRGGG GRGGG GGG GG G GGG Sbjct: 5 FSPRGGGFGG--RGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGRGGG 62 Query: 203 GFRGGRGGGFRGRG 216 GF G G RGRG Sbjct: 63 GFHSGGNRG-RGRG 75 Score = 59.3 bits (142), Expect = 2e-09 Identities = 32/52 (61%), Positives = 32/52 (61%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214 G G RG G G RG GRGGGG GGG GGG RGG G GG RG GG RG Sbjct: 28 GGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGGNRGRGRGGKRG 79 Score = 53.5 bits (127), Expect = 1e-07 Identities = 34/58 (58%), Positives = 35/58 (60%), Gaps = 10/58 (17%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61 RGGG GG RGG G +RGG RGG GG GGG RGGG G GRGGG GG G Sbjct: 8 RGGGFGG--RGGFG---DRGG-----RGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGG 55 Score = 53.5 bits (127), Expect = 1e-07 Identities = 30/50 (60%), Positives = 31/50 (62%), Gaps = 3/50 (6%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFR--GGRGGGGGGFRGGRGG 210 G G RG GRGG GGG GGGG GG GGGF G RG G GG RG + G Sbjct: 35 GRGGGFRGRGRGGGGGG-GGGGGGGRGGGGFHSGGNRGRGRGGKRGNQSG 83 Score = 46.2 bits (108), Expect = 2e-05 Identities = 33/61 (54%), Positives = 36/61 (59%), Gaps = 13/61 (21%) Query: 10 GFN-RGGGGGGFNRGGSSNHFRGGGGGGGG--------GNFRGGGRGGFGRGGGRGGFNK 60 GF+ RGGG GG RGG + RGG GG GG G FRG GRGG G GGG GG + Sbjct: 4 GFSPRGGGFGG--RGGFGD--RGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGR 59 Query: 61 G 61 G Sbjct: 60 G 60 Score = 39.7 bits (91), Expect = 0.002 Identities = 24/45 (53%), Positives = 25/45 (55%), Gaps = 3/45 (6%) Query: 157 FLPRPPGEKGPPRGGGRGGRGGG--RGGGGRGGGRGGGFRGGRGG 199 F R G G GGG GGRGGG GG RG GRGG RG + G Sbjct: 40 FRGRGRGGGGGGGGGGGGGRGGGGFHSGGNRGRGRGGK-RGNQSG 83 >gi|253970504 Ewing sarcoma breakpoint region 1 isoform 4 [Homo sapiens] Length = 600 Score = 70.5 bits (171), Expect = 1e-12 Identities = 79/230 (34%), Positives = 93/230 (40%), Gaps = 48/230 (20%) Query: 9 GGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQGPP- 67 G NRG G GGF+RGG S RGG GGG GG G RGGF + GG D GPP Sbjct: 240 GPDNRGRGRGGFDRGGMS---RGGRGGGRGGMGSAGERGGFNKPGGPMDEGPDLDLGPPV 296 Query: 68 -----------------ERVVL--LGEFLHPCEDDIVCKCT---------TDENKVPYFN 99 + V L L +F C + K T E P + Sbjct: 297 DPDEDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGD 356 Query: 100 APVYLENKEQIGKVDEIFGQLRDFYFS-VKLSENMKASSFKKLQKFYIDPYKLLPLQRFL 158 A V E+ E F +DF S +K+S K ++ LP + Sbjct: 357 ATVSYEDPPTAKAAVEWFDG-KDFQGSKLKVSLARKKPPMNSMRGG-------LPPREGR 408 Query: 159 PRPPGEKGPPRGGGRGGRGGGRGG-GGRGGGRGG----GFRGGRGGGGGG 203 PP +G P GG GG GG G GGRGG RGG G RG RG GG Sbjct: 409 GMPPPLRGGP--GGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGG 456 Score = 67.4 bits (163), Expect = 9e-12 Identities = 39/62 (62%), Positives = 39/62 (62%), Gaps = 4/62 (6%) Query: 157 FLPRPPGEKGPPRG-GGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRG---GGF 212 FLP P G RG GG GG GGRGG GG GG FRGGRGG GGFRGGRG GGF Sbjct: 495 FLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGF 554 Query: 213 RG 214 G Sbjct: 555 GG 556 Score = 65.1 bits (157), Expect = 4e-11 Identities = 80/262 (30%), Positives = 97/262 (37%), Gaps = 85/262 (32%) Query: 1 MSFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRG---GGRGGFGRGGGRGG 57 M G GGF+ G G + G N RG GG GG RG GGRGG G G RGG Sbjct: 219 MGVYGQESGGFS--GPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGSAGERGG 276 Query: 58 FNK---GQDQGPPERVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVD 114 FNK D+GP + LG + P ED N+ +Y++ +D Sbjct: 277 FNKPGGPMDEGPD---LDLGPPVDPDEDS--------------DNSAIYVQGLNDSVTLD 319 Query: 115 EIFGQLRDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGE---------- 164 + L DF+ K K+ K P + L + +P G+ Sbjct: 320 D----LADFF---------KQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPT 366 Query: 165 ------------------------KGPPRGGGRGG----RGGG-----RGGGGRGGGRGG 191 K PP RGG G G RGG G GG GG Sbjct: 367 AKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGPGG 426 Query: 192 --GFRGGRGGGGGGF--RGGRG 209 G GGRGG GGF RG RG Sbjct: 427 PMGRMGGRGGDRGGFPPRGPRG 448 Score = 59.3 bits (142), Expect = 2e-09 Identities = 37/62 (59%), Positives = 39/62 (62%), Gaps = 10/62 (16%) Query: 159 PRPPGEKGPPRGGG-RGGRGG--GRGG------GGRGGGRGGGFRGGRGGGGGGFRGGRG 209 P P G++G GG RGGRGG RGG GGRGG R GGFRGGRG GGF GGR Sbjct: 501 PPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDR-GGFRGGRGMDRGGFGGGRR 559 Query: 210 GG 211 GG Sbjct: 560 GG 561 Score = 55.8 bits (133), Expect = 3e-08 Identities = 37/67 (55%), Positives = 38/67 (56%), Gaps = 10/67 (14%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGG---GRGGFGRGGGRGGFNK 60 RG G G RGG GG +RGG FRGG GG GG FRGG RGGFG GG RGG Sbjct: 507 RGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGG-FRGGRGMDRGGFG-GGRRGG--- 561 Query: 61 GQDQGPP 67 GPP Sbjct: 562 --PGGPP 566 Score = 55.1 bits (131), Expect = 5e-08 Identities = 34/59 (57%), Positives = 36/59 (61%), Gaps = 12/59 (20%) Query: 164 EKGPPRGGGRGGRGGGRGG--GGRG---GGRGGGFRGGRGGGG-------GGFRGGRGG 210 ++G P G RGGRGG RGG GGRG GG GGG RGG GG GG RGGRGG Sbjct: 524 DRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGG 582 Score = 48.9 bits (115), Expect = 3e-06 Identities = 37/74 (50%), Positives = 39/74 (52%), Gaps = 15/74 (20%) Query: 6 GGRGGF-NRGGGGGGFN--RGGSSNHFRGGGG---GGGGGNFRGGGRGG--------FGR 51 GGRGG +RGG GG F RGG FRGG G GG GG RGG G GR Sbjct: 517 GGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGR 576 Query: 52 GGGRGGFNKGQDQG 65 GGRGG K D+G Sbjct: 577 RGGRGGPGK-MDKG 589 Score = 47.4 bits (111), Expect = 1e-05 Identities = 30/60 (50%), Positives = 31/60 (51%), Gaps = 3/60 (5%) Query: 9 GGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF--GRGGGRGGFNKGQDQGP 66 GG GG GG RGG GG GG RGG RGGF GRG RGGF G+ GP Sbjct: 504 GGDRGRGGPGGM-RGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGP 562 Score = 46.2 bits (108), Expect = 2e-05 Identities = 28/51 (54%), Positives = 29/51 (56%), Gaps = 12/51 (23%) Query: 163 GEKGPPRGGGRGGRGGGRG--GGGRGGGRG----------GGFRGGRGGGG 201 G +G RGG RGGRG RG GGGR GG G GG RGGRGG G Sbjct: 534 GGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPG 584 Score = 43.9 bits (102), Expect = 1e-04 Identities = 29/61 (47%), Positives = 32/61 (52%), Gaps = 8/61 (13%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFR--GGGRGGFGRGGGRGGFNKG 61 RGG RGGF GG G +RGG RGG GG G GG RGG GG G +KG Sbjct: 536 RGGDRGGFR---GGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGG---RGGPGKMDKG 589 Query: 62 Q 62 + Sbjct: 590 E 590 Score = 38.9 bits (89), Expect = 0.003 Identities = 31/67 (46%), Positives = 31/67 (46%), Gaps = 10/67 (14%) Query: 159 PRPPGEKGPPRGG--GRGGRGGGRGGGGRGGGRGGGFRGG--RGGGGGGFRGGRG----- 209 P G G GG G G G RG GRGG RGG RGG GGG RGG G Sbjct: 216 PSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGG-RGGMGSAGER 274 Query: 210 GGFRGRG 216 GGF G Sbjct: 275 GGFNKPG 281 Score = 36.6 bits (83), Expect = 0.017 Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 9/45 (20%) Query: 163 GEKGPPRGGGRGGRGGGRGG---------GGRGGGRGGGFRGGRG 198 G +G RGG GGR GG GG GGR GGRGG + +G Sbjct: 545 GGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKG 589 Score = 33.1 bits (74), Expect = 0.19 Identities = 30/98 (30%), Positives = 35/98 (35%), Gaps = 31/98 (31%) Query: 1 MSFRGGGRGGF-------NRGGGGGGFNRGGSSNHFRGGGGGGGGGNFR----------- 42 M RGG RGGF +RG GG N + ++ G G NF Sbjct: 431 MGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQCKAP 490 Query: 43 -------------GGGRGGFGRGGGRGGFNKGQDQGPP 67 GG RG G GG RGG D+G P Sbjct: 491 KPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGP 528 Score = 29.6 bits (65), Expect = 2.1 Identities = 23/56 (41%), Positives = 23/56 (41%), Gaps = 3/56 (5%) Query: 13 RGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGR--GGGRGGFNKGQDQGP 66 RGG GG GG GG GG GG G RG G GGG G Q P Sbjct: 415 RGGPGGPGGPGGPMGRM-GGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCP 469 Score = 28.5 bits (62), Expect = 4.6 Identities = 20/44 (45%), Positives = 20/44 (45%), Gaps = 6/44 (13%) Query: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGG----GGGGGGGNFRGGG 45 GG GG GG GG R G RGG G G GN GGG Sbjct: 416 GGPGG--PGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGG 457 >gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo sapiens] Length = 656 Score = 70.5 bits (171), Expect = 1e-12 Identities = 79/230 (34%), Positives = 93/230 (40%), Gaps = 48/230 (20%) Query: 9 GGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQGPP- 67 G NRG G GGF+RGG S RGG GGG GG G RGGF + GG D GPP Sbjct: 296 GPDNRGRGRGGFDRGGMS---RGGRGGGRGGMGSAGERGGFNKPGGPMDEGPDLDLGPPV 352 Query: 68 -----------------ERVVL--LGEFLHPCEDDIVCKCT---------TDENKVPYFN 99 + V L L +F C + K T E P + Sbjct: 353 DPDEDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGD 412 Query: 100 APVYLENKEQIGKVDEIFGQLRDFYFS-VKLSENMKASSFKKLQKFYIDPYKLLPLQRFL 158 A V E+ E F +DF S +K+S K ++ LP + Sbjct: 413 ATVSYEDPPTAKAAVEWFDG-KDFQGSKLKVSLARKKPPMNSMRGG-------LPPREGR 464 Query: 159 PRPPGEKGPPRGGGRGGRGGGRGG-GGRGGGRGG----GFRGGRGGGGGG 203 PP +G P GG GG GG G GGRGG RGG G RG RG GG Sbjct: 465 GMPPPLRGGP--GGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGG 512 Score = 67.4 bits (163), Expect = 9e-12 Identities = 39/62 (62%), Positives = 39/62 (62%), Gaps = 4/62 (6%) Query: 157 FLPRPPGEKGPPRG-GGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRG---GGF 212 FLP P G RG GG GG GGRGG GG GG FRGGRGG GGFRGGRG GGF Sbjct: 551 FLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGF 610 Query: 213 RG 214 G Sbjct: 611 GG 612 Score = 65.1 bits (157), Expect = 4e-11 Identities = 80/262 (30%), Positives = 97/262 (37%), Gaps = 85/262 (32%) Query: 1 MSFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRG---GGRGGFGRGGGRGG 57 M G GGF+ G G + G N RG GG GG RG GGRGG G G RGG Sbjct: 275 MGVYGQESGGFS--GPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGSAGERGG 332 Query: 58 FNK---GQDQGPPERVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVD 114 FNK D+GP + LG + P ED N+ +Y++ +D Sbjct: 333 FNKPGGPMDEGPD---LDLGPPVDPDEDS--------------DNSAIYVQGLNDSVTLD 375 Query: 115 EIFGQLRDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGE---------- 164 + L DF+ K K+ K P + L + +P G+ Sbjct: 376 D----LADFF---------KQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPT 422 Query: 165 ------------------------KGPPRGGGRGG----RGGG-----RGGGGRGGGRGG 191 K PP RGG G G RGG G GG GG Sbjct: 423 AKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGPGG 482 Query: 192 --GFRGGRGGGGGGF--RGGRG 209 G GGRGG GGF RG RG Sbjct: 483 PMGRMGGRGGDRGGFPPRGPRG 504 Score = 59.3 bits (142), Expect = 2e-09 Identities = 37/62 (59%), Positives = 39/62 (62%), Gaps = 10/62 (16%) Query: 159 PRPPGEKGPPRGGG-RGGRGG--GRGG------GGRGGGRGGGFRGGRGGGGGGFRGGRG 209 P P G++G GG RGGRGG RGG GGRGG R GGFRGGRG GGF GGR Sbjct: 557 PPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDR-GGFRGGRGMDRGGFGGGRR 615 Query: 210 GG 211 GG Sbjct: 616 GG 617 Score = 55.8 bits (133), Expect = 3e-08 Identities = 37/67 (55%), Positives = 38/67 (56%), Gaps = 10/67 (14%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGG---GRGGFGRGGGRGGFNK 60 RG G G RGG GG +RGG FRGG GG GG FRGG RGGFG GG RGG Sbjct: 563 RGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGG-FRGGRGMDRGGFG-GGRRGG--- 617 Query: 61 GQDQGPP 67 GPP Sbjct: 618 --PGGPP 622 Score = 55.1 bits (131), Expect = 5e-08 Identities = 34/59 (57%), Positives = 36/59 (61%), Gaps = 12/59 (20%) Query: 164 EKGPPRGGGRGGRGGGRGG--GGRG---GGRGGGFRGGRGGGG-------GGFRGGRGG 210 ++G P G RGGRGG RGG GGRG GG GGG RGG GG GG RGGRGG Sbjct: 580 DRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGG 638 Score = 48.9 bits (115), Expect = 3e-06 Identities = 37/74 (50%), Positives = 39/74 (52%), Gaps = 15/74 (20%) Query: 6 GGRGGF-NRGGGGGGFN--RGGSSNHFRGGGG---GGGGGNFRGGGRGG--------FGR 51 GGRGG +RGG GG F RGG FRGG G GG GG RGG G GR Sbjct: 573 GGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGR 632 Query: 52 GGGRGGFNKGQDQG 65 GGRGG K D+G Sbjct: 633 RGGRGGPGK-MDKG 645 Score = 47.4 bits (111), Expect = 1e-05 Identities = 30/60 (50%), Positives = 31/60 (51%), Gaps = 3/60 (5%) Query: 9 GGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF--GRGGGRGGFNKGQDQGP 66 GG GG GG RGG GG GG RGG RGGF GRG RGGF G+ GP Sbjct: 560 GGDRGRGGPGGM-RGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGP 618 Score = 46.2 bits (108), Expect = 2e-05 Identities = 28/51 (54%), Positives = 29/51 (56%), Gaps = 12/51 (23%) Query: 163 GEKGPPRGGGRGGRGGGRG--GGGRGGGRG----------GGFRGGRGGGG 201 G +G RGG RGGRG RG GGGR GG G GG RGGRGG G Sbjct: 590 GGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPG 640 Score = 43.9 bits (102), Expect = 1e-04 Identities = 29/61 (47%), Positives = 32/61 (52%), Gaps = 8/61 (13%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFR--GGGRGGFGRGGGRGGFNKG 61 RGG RGGF GG G +RGG RGG GG G GG RGG GG G +KG Sbjct: 592 RGGDRGGFR---GGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGG---RGGPGKMDKG 645 Query: 62 Q 62 + Sbjct: 646 E 646 Score = 38.9 bits (89), Expect = 0.003 Identities = 31/67 (46%), Positives = 31/67 (46%), Gaps = 10/67 (14%) Query: 159 PRPPGEKGPPRGG--GRGGRGGGRGGGGRGGGRGGGFRGG--RGGGGGGFRGGRG----- 209 P G G GG G G G RG GRGG RGG RGG GGG RGG G Sbjct: 272 PSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGG-RGGMGSAGER 330 Query: 210 GGFRGRG 216 GGF G Sbjct: 331 GGFNKPG 337 Score = 36.6 bits (83), Expect = 0.017 Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 9/45 (20%) Query: 163 GEKGPPRGGGRGGRGGGRGG---------GGRGGGRGGGFRGGRG 198 G +G RGG GGR GG GG GGR GGRGG + +G Sbjct: 601 GGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKG 645 Score = 33.1 bits (74), Expect = 0.19 Identities = 30/98 (30%), Positives = 35/98 (35%), Gaps = 31/98 (31%) Query: 1 MSFRGGGRGGF-------NRGGGGGGFNRGGSSNHFRGGGGGGGGGNFR----------- 42 M RGG RGGF +RG GG N + ++ G G NF Sbjct: 487 MGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQCKAP 546 Query: 43 -------------GGGRGGFGRGGGRGGFNKGQDQGPP 67 GG RG G GG RGG D+G P Sbjct: 547 KPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGP 584 Score = 29.6 bits (65), Expect = 2.1 Identities = 23/56 (41%), Positives = 23/56 (41%), Gaps = 3/56 (5%) Query: 13 RGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGR--GGGRGGFNKGQDQGP 66 RGG GG GG GG GG GG G RG G GGG G Q P Sbjct: 471 RGGPGGPGGPGGPMGRM-GGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCP 525 Score = 28.5 bits (62), Expect = 4.6 Identities = 20/44 (45%), Positives = 20/44 (45%), Gaps = 6/44 (13%) Query: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGG----GGGGGGGNFRGGG 45 GG GG GG GG R G RGG G G GN GGG Sbjct: 472 GGPGG--PGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGG 513 >gi|55956788 nucleolin [Homo sapiens] Length = 710 Score = 69.3 bits (168), Expect = 2e-12 Identities = 39/51 (76%), Positives = 40/51 (78%), Gaps = 7/51 (13%) Query: 168 PRG-GGRGGRGGGRGG-GGRGGGRGG-GFRGGRGGGG----GGFRGGRGGG 211 P+G GG GGRGGGRGG GGRGGGRGG G GGRG GG GGFRGGRGGG Sbjct: 647 PKGEGGFGGRGGGRGGFGGRGGGRGGRGGFGGRGRGGFGGRGGFRGGRGGG 697 Score = 57.4 bits (137), Expect = 9e-09 Identities = 38/62 (61%), Positives = 38/62 (61%), Gaps = 10/62 (16%) Query: 7 GRGGFN-RGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF-GRGGGRGGFNKGQDQ 64 G GGF RGGG GGF GG RGGG GG GG F G GRGGF GRGG RGG G D Sbjct: 649 GEGGFGGRGGGRGGF--GG-----RGGGRGGRGG-FGGRGRGGFGGRGGFRGGRGGGGDH 700 Query: 65 GP 66 P Sbjct: 701 KP 702 Score = 55.8 bits (133), Expect = 3e-08 Identities = 36/59 (61%), Positives = 37/59 (62%), Gaps = 11/59 (18%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQ 62 RGGGRGGF GG GGG RGG RGG GG G G F GGRGGF G G GG +K Q Sbjct: 656 RGGGRGGF--GGRGGG--RGG-----RGGFGGRGRGGF--GGRGGFRGGRGGGGDHKPQ 703 Score = 38.1 bits (87), Expect = 0.006 Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 14/50 (28%) Query: 30 RGGGGGGGGGNFRG---------GGRGGF-GRG----GGRGGFNKGQDQG 65 +G GG GG G RG GGRGGF GRG GGRGGF G+ G Sbjct: 648 KGEGGFGGRGGGRGGFGGRGGGRGGRGGFGGRGRGGFGGRGGFRGGRGGG 697 Score = 31.6 bits (70), Expect = 0.54 Identities = 19/35 (54%), Positives = 19/35 (54%), Gaps = 12/35 (34%) Query: 3 FRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGG 37 F G GRGGF GG GG FRGG GGGG Sbjct: 676 FGGRGRGGF--GGRGG----------FRGGRGGGG 698 >gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo sapiens] Length = 655 Score = 67.8 bits (164), Expect = 7e-12 Identities = 78/230 (33%), Positives = 92/230 (40%), Gaps = 49/230 (21%) Query: 9 GGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQGPP- 67 G NRG G GGF+RGG S RGGG GG G G RGGF + GG D GPP Sbjct: 296 GPDNRGRGRGGFDRGGMSRGGRGGGRGGMG----AGERGGFNKPGGPMDEGPDLDLGPPV 351 Query: 68 -----------------ERVVL--LGEFLHPCEDDIVCKCT---------TDENKVPYFN 99 + V L L +F C + K T E P + Sbjct: 352 DPDEDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGD 411 Query: 100 APVYLENKEQIGKVDEIFGQLRDFYFS-VKLSENMKASSFKKLQKFYIDPYKLLPLQRFL 158 A V E+ E F +DF S +K+S K ++ LP + Sbjct: 412 ATVSYEDPPTAKAAVEWFDG-KDFQGSKLKVSLARKKPPMNSMRGG-------LPPREGR 463 Query: 159 PRPPGEKGPPRGGGRGGRGGGRGG-GGRGGGRGG----GFRGGRGGGGGG 203 PP +G P GG GG GG G GGRGG RGG G RG RG GG Sbjct: 464 GMPPPLRGGP--GGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGG 511 Score = 67.4 bits (163), Expect = 9e-12 Identities = 39/62 (62%), Positives = 39/62 (62%), Gaps = 4/62 (6%) Query: 157 FLPRPPGEKGPPRG-GGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRG---GGF 212 FLP P G RG GG GG GGRGG GG GG FRGGRGG GGFRGGRG GGF Sbjct: 550 FLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGF 609 Query: 213 RG 214 G Sbjct: 610 GG 611 Score = 60.8 bits (146), Expect = 8e-10 Identities = 80/262 (30%), Positives = 97/262 (37%), Gaps = 86/262 (32%) Query: 1 MSFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRG---GGRGGFGRGGGRGG 57 M G GGF+ G G + G N RG GG GG RG GGRGG G G RGG Sbjct: 275 MGVYGQESGGFS--GPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMG-AGERGG 331 Query: 58 FNK---GQDQGPPERVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVD 114 FNK D+GP + LG + P ED N+ +Y++ +D Sbjct: 332 FNKPGGPMDEGPD---LDLGPPVDPDEDS--------------DNSAIYVQGLNDSVTLD 374 Query: 115 EIFGQLRDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGE---------- 164 + L DF+ K K+ K P + L + +P G+ Sbjct: 375 D----LADFF---------KQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPT 421 Query: 165 ------------------------KGPPRGGGRGG----RGGG-----RGGGGRGGGRGG 191 K PP RGG G G RGG G GG GG Sbjct: 422 AKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGPGG 481 Query: 192 --GFRGGRGGGGGGF--RGGRG 209 G GGRGG GGF RG RG Sbjct: 482 PMGRMGGRGGDRGGFPPRGPRG 503 Score = 59.3 bits (142), Expect = 2e-09 Identities = 37/62 (59%), Positives = 39/62 (62%), Gaps = 10/62 (16%) Query: 159 PRPPGEKGPPRGGG-RGGRGG--GRGG------GGRGGGRGGGFRGGRGGGGGGFRGGRG 209 P P G++G GG RGGRGG RGG GGRGG R GGFRGGRG GGF GGR Sbjct: 556 PPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDR-GGFRGGRGMDRGGFGGGRR 614 Query: 210 GG 211 GG Sbjct: 615 GG 616 Score = 55.8 bits (133), Expect = 3e-08 Identities = 37/66 (56%), Positives = 38/66 (57%), Gaps = 7/66 (10%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGG---GRGGFGRGGGRGGFNK 60 RG G G RGG GG +RGG FRGG GG GG FRGG RGGFG GG RGG Sbjct: 562 RGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGG-FRGGRGMDRGGFG-GGRRGG--P 617 Query: 61 GQDQGP 66 G GP Sbjct: 618 GGPPGP 623 Score = 55.1 bits (131), Expect = 5e-08 Identities = 34/59 (57%), Positives = 36/59 (61%), Gaps = 12/59 (20%) Query: 164 EKGPPRGGGRGGRGGGRGG--GGRG---GGRGGGFRGGRGGGG-------GGFRGGRGG 210 ++G P G RGGRGG RGG GGRG GG GGG RGG GG GG RGGRGG Sbjct: 579 DRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGG 637 Score = 48.9 bits (115), Expect = 3e-06 Identities = 37/74 (50%), Positives = 39/74 (52%), Gaps = 15/74 (20%) Query: 6 GGRGGF-NRGGGGGGFN--RGGSSNHFRGGGG---GGGGGNFRGGGRGG--------FGR 51 GGRGG +RGG GG F RGG FRGG G GG GG RGG G GR Sbjct: 572 GGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGR 631 Query: 52 GGGRGGFNKGQDQG 65 GGRGG K D+G Sbjct: 632 RGGRGGPGK-MDKG 644 Score = 47.4 bits (111), Expect = 1e-05 Identities = 30/60 (50%), Positives = 31/60 (51%), Gaps = 3/60 (5%) Query: 9 GGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF--GRGGGRGGFNKGQDQGP 66 GG GG GG RGG GG GG RGG RGGF GRG RGGF G+ GP Sbjct: 559 GGDRGRGGPGGM-RGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGP 617 Score = 46.2 bits (108), Expect = 2e-05 Identities = 28/51 (54%), Positives = 29/51 (56%), Gaps = 12/51 (23%) Query: 163 GEKGPPRGGGRGGRGGGRG--GGGRGGGRG----------GGFRGGRGGGG 201 G +G RGG RGGRG RG GGGR GG G GG RGGRGG G Sbjct: 589 GGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPG 639 Score = 45.8 bits (107), Expect = 3e-05 Identities = 28/55 (50%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGG-GRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216 G GP G R G G GRGG RGG RGGRGGG GG G GGF G Sbjct: 284 GFSGP--GENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPG 336 Score = 43.9 bits (102), Expect = 1e-04 Identities = 29/61 (47%), Positives = 32/61 (52%), Gaps = 8/61 (13%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFR--GGGRGGFGRGGGRGGFNKG 61 RGG RGGF GG G +RGG RGG GG G GG RGG GG G +KG Sbjct: 591 RGGDRGGFR---GGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGG---RGGPGKMDKG 644 Query: 62 Q 62 + Sbjct: 645 E 645 Score = 37.0 bits (84), Expect = 0.013 Identities = 25/54 (46%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Query: 159 PRPPGEKGPPRGG--GRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGG 210 P G G GG G G G RG GRGG RGG GG G GGRGG Sbjct: 272 PSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRG--GGRGG 323 Score = 36.6 bits (83), Expect = 0.017 Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 9/45 (20%) Query: 163 GEKGPPRGGGRGGRGGGRGG---------GGRGGGRGGGFRGGRG 198 G +G RGG GGR GG GG GGR GGRGG + +G Sbjct: 600 GGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKG 644 Score = 33.1 bits (74), Expect = 0.19 Identities = 30/98 (30%), Positives = 35/98 (35%), Gaps = 31/98 (31%) Query: 1 MSFRGGGRGGF-------NRGGGGGGFNRGGSSNHFRGGGGGGGGGNFR----------- 42 M RGG RGGF +RG GG N + ++ G G NF Sbjct: 486 MGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQCKAP 545 Query: 43 -------------GGGRGGFGRGGGRGGFNKGQDQGPP 67 GG RG G GG RGG D+G P Sbjct: 546 KPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGP 583 Score = 29.6 bits (65), Expect = 2.1 Identities = 23/56 (41%), Positives = 23/56 (41%), Gaps = 3/56 (5%) Query: 13 RGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGR--GGGRGGFNKGQDQGP 66 RGG GG GG GG GG GG G RG G GGG G Q P Sbjct: 470 RGGPGGPGGPGGPMGRM-GGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCP 524 Score = 28.5 bits (62), Expect = 4.6 Identities = 20/44 (45%), Positives = 20/44 (45%), Gaps = 6/44 (13%) Query: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGG----GGGGGGGNFRGGG 45 GG GG GG GG R G RGG G G GN GGG Sbjct: 471 GGPGG--PGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGG 512 >gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo sapiens] Length = 661 Score = 67.8 bits (164), Expect = 7e-12 Identities = 78/230 (33%), Positives = 92/230 (40%), Gaps = 49/230 (21%) Query: 9 GGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQGPP- 67 G NRG G GGF+RGG S RGGG GG G G RGGF + GG D GPP Sbjct: 302 GPDNRGRGRGGFDRGGMSRGGRGGGRGGMG----AGERGGFNKPGGPMDEGPDLDLGPPV 357 Query: 68 -----------------ERVVL--LGEFLHPCEDDIVCKCT---------TDENKVPYFN 99 + V L L +F C + K T E P + Sbjct: 358 DPDEDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGD 417 Query: 100 APVYLENKEQIGKVDEIFGQLRDFYFS-VKLSENMKASSFKKLQKFYIDPYKLLPLQRFL 158 A V E+ E F +DF S +K+S K ++ LP + Sbjct: 418 ATVSYEDPPTAKAAVEWFDG-KDFQGSKLKVSLARKKPPMNSMRGG-------LPPREGR 469 Query: 159 PRPPGEKGPPRGGGRGGRGGGRGG-GGRGGGRGG----GFRGGRGGGGGG 203 PP +G P GG GG GG G GGRGG RGG G RG RG GG Sbjct: 470 GMPPPLRGGP--GGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGG 517 Score = 67.4 bits (163), Expect = 9e-12 Identities = 39/62 (62%), Positives = 39/62 (62%), Gaps = 4/62 (6%) Query: 157 FLPRPPGEKGPPRG-GGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRG---GGF 212 FLP P G RG GG GG GGRGG GG GG FRGGRGG GGFRGGRG GGF Sbjct: 556 FLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGF 615 Query: 213 RG 214 G Sbjct: 616 GG 617 Score = 60.8 bits (146), Expect = 8e-10 Identities = 80/262 (30%), Positives = 97/262 (37%), Gaps = 86/262 (32%) Query: 1 MSFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRG---GGRGGFGRGGGRGG 57 M G GGF+ G G + G N RG GG GG RG GGRGG G G RGG Sbjct: 281 MGVYGQESGGFS--GPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMG-AGERGG 337 Query: 58 FNK---GQDQGPPERVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVD 114 FNK D+GP + LG + P ED N+ +Y++ +D Sbjct: 338 FNKPGGPMDEGPD---LDLGPPVDPDEDS--------------DNSAIYVQGLNDSVTLD 380 Query: 115 EIFGQLRDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGE---------- 164 + L DF+ K K+ K P + L + +P G+ Sbjct: 381 D----LADFF---------KQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPT 427 Query: 165 ------------------------KGPPRGGGRGG----RGGG-----RGGGGRGGGRGG 191 K PP RGG G G RGG G GG GG Sbjct: 428 AKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGPGG 487 Query: 192 --GFRGGRGGGGGGF--RGGRG 209 G GGRGG GGF RG RG Sbjct: 488 PMGRMGGRGGDRGGFPPRGPRG 509 Score = 59.3 bits (142), Expect = 2e-09 Identities = 37/62 (59%), Positives = 39/62 (62%), Gaps = 10/62 (16%) Query: 159 PRPPGEKGPPRGGG-RGGRGG--GRGG------GGRGGGRGGGFRGGRGGGGGGFRGGRG 209 P P G++G GG RGGRGG RGG GGRGG R GGFRGGRG GGF GGR Sbjct: 562 PPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDR-GGFRGGRGMDRGGFGGGRR 620 Query: 210 GG 211 GG Sbjct: 621 GG 622 Score = 55.8 bits (133), Expect = 3e-08 Identities = 37/66 (56%), Positives = 38/66 (57%), Gaps = 7/66 (10%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGG---GRGGFGRGGGRGGFNK 60 RG G G RGG GG +RGG FRGG GG GG FRGG RGGFG GG RGG Sbjct: 568 RGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGG-FRGGRGMDRGGFG-GGRRGG--P 623 Query: 61 GQDQGP 66 G GP Sbjct: 624 GGPPGP 629 Score = 55.1 bits (131), Expect = 5e-08 Identities = 34/59 (57%), Positives = 36/59 (61%), Gaps = 12/59 (20%) Query: 164 EKGPPRGGGRGGRGGGRGG--GGRG---GGRGGGFRGGRGGGG-------GGFRGGRGG 210 ++G P G RGGRGG RGG GGRG GG GGG RGG GG GG RGGRGG Sbjct: 585 DRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGG 643 Score = 48.9 bits (115), Expect = 3e-06 Identities = 37/74 (50%), Positives = 39/74 (52%), Gaps = 15/74 (20%) Query: 6 GGRGGF-NRGGGGGGFN--RGGSSNHFRGGGG---GGGGGNFRGGGRGG--------FGR 51 GGRGG +RGG GG F RGG FRGG G GG GG RGG G GR Sbjct: 578 GGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGR 637 Query: 52 GGGRGGFNKGQDQG 65 GGRGG K D+G Sbjct: 638 RGGRGGPGK-MDKG 650 Score = 47.4 bits (111), Expect = 1e-05 Identities = 30/60 (50%), Positives = 31/60 (51%), Gaps = 3/60 (5%) Query: 9 GGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF--GRGGGRGGFNKGQDQGP 66 GG GG GG RGG GG GG RGG RGGF GRG RGGF G+ GP Sbjct: 565 GGDRGRGGPGGM-RGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGP 623 Score = 46.2 bits (108), Expect = 2e-05 Identities = 28/51 (54%), Positives = 29/51 (56%), Gaps = 12/51 (23%) Query: 163 GEKGPPRGGGRGGRGGGRG--GGGRGGGRG----------GGFRGGRGGGG 201 G +G RGG RGGRG RG GGGR GG G GG RGGRGG G Sbjct: 595 GGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPG 645 Score = 45.8 bits (107), Expect = 3e-05 Identities = 28/55 (50%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGG-GRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216 G GP G R G G GRGG RGG RGGRGGG GG G GGF G Sbjct: 290 GFSGP--GENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPG 342 Score = 43.9 bits (102), Expect = 1e-04 Identities = 29/61 (47%), Positives = 32/61 (52%), Gaps = 8/61 (13%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFR--GGGRGGFGRGGGRGGFNKG 61 RGG RGGF GG G +RGG RGG GG G GG RGG GG G +KG Sbjct: 597 RGGDRGGFR---GGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGG---RGGPGKMDKG 650 Query: 62 Q 62 + Sbjct: 651 E 651 Score = 37.0 bits (84), Expect = 0.013 Identities = 25/54 (46%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Query: 159 PRPPGEKGPPRGG--GRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGG 210 P G G GG G G G RG GRGG RGG GG G GGRGG Sbjct: 278 PSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRG--GGRGG 329 Score = 36.6 bits (83), Expect = 0.017 Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 9/45 (20%) Query: 163 GEKGPPRGGGRGGRGGGRGG---------GGRGGGRGGGFRGGRG 198 G +G RGG GGR GG GG GGR GGRGG + +G Sbjct: 606 GGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKG 650 Score = 33.1 bits (74), Expect = 0.19 Identities = 30/98 (30%), Positives = 35/98 (35%), Gaps = 31/98 (31%) Query: 1 MSFRGGGRGGF-------NRGGGGGGFNRGGSSNHFRGGGGGGGGGNFR----------- 42 M RGG RGGF +RG GG N + ++ G G NF Sbjct: 492 MGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQCKAP 551 Query: 43 -------------GGGRGGFGRGGGRGGFNKGQDQGPP 67 GG RG G GG RGG D+G P Sbjct: 552 KPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGP 589 Score = 29.6 bits (65), Expect = 2.1 Identities = 23/56 (41%), Positives = 23/56 (41%), Gaps = 3/56 (5%) Query: 13 RGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGR--GGGRGGFNKGQDQGP 66 RGG GG GG GG GG GG G RG G GGG G Q P Sbjct: 476 RGGPGGPGGPGGPMGRM-GGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCP 530 Score = 28.5 bits (62), Expect = 4.6 Identities = 20/44 (45%), Positives = 20/44 (45%), Gaps = 6/44 (13%) Query: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGG----GGGGGGGNFRGGG 45 GG GG GG GG R G RGG G G GN GGG Sbjct: 477 GGPGG--PGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGG 518 >gi|119395750 keratin 1 [Homo sapiens] Length = 644 Score = 64.3 bits (155), Expect = 8e-11 Identities = 37/62 (59%), Positives = 37/62 (59%), Gaps = 10/62 (16%) Query: 4 RGGGRG-GFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGG---GRGGFN 59 RGGGRG GF G GGGGF GG GGGG GGG GGG GGFG GG G GGF Sbjct: 82 RGGGRGSGFGGGYGGGGFGGGGF------GGGGFGGGGIGGGGFGGFGSGGGGFGGGGFG 135 Query: 60 KG 61 G Sbjct: 136 GG 137 Score = 60.8 bits (146), Expect = 8e-10 Identities = 31/64 (48%), Positives = 36/64 (56%), Gaps = 5/64 (7%) Query: 5 GGGRGGFNRGGGGGG---FNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61 G G G + GGGGGG + G SS +RGG GGGGGG+ G G GG GG GG +G Sbjct: 560 GSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGGSIGG--RG 617 Query: 62 QDQG 65 G Sbjct: 618 SSSG 621 Score = 59.7 bits (143), Expect = 2e-09 Identities = 29/53 (54%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRG----GGRGGGFRGGRGGGGGGFRGGRGGG 211 G G G G G G G GGGG G G GG+RGG GGGGGG GGRG G Sbjct: 553 GSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSG 605 Score = 59.3 bits (142), Expect = 2e-09 Identities = 35/52 (67%), Positives = 35/52 (67%), Gaps = 4/52 (7%) Query: 169 RGGGRG-GRGGGRGGGGRGGGR--GGGFRGGR-GGGGGGFRGGRGGGFRGRG 216 RGGGRG G GGG GGGG GGG GGGF GG GGGG G G GGGF G G Sbjct: 82 RGGGRGSGFGGGYGGGGFGGGGFGGGGFGGGGIGGGGFGGFGSGGGGFGGGG 133 Score = 59.3 bits (142), Expect = 2e-09 Identities = 33/72 (45%), Positives = 40/72 (55%), Gaps = 15/72 (20%) Query: 9 GGFNRGGGGGGFNRGGSS------NHFRGGGGGGG------GGNFRGGGRGGFGRGGGRG 56 GG +RGGGGGG+ GGSS ++ GGGGGGG GG+ G G G +G GGG G Sbjct: 514 GGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGG 573 Query: 57 G---FNKGQDQG 65 G + G G Sbjct: 574 GHGSYGSGSSSG 585 Score = 54.7 bits (130), Expect = 6e-08 Identities = 33/61 (54%), Positives = 34/61 (55%), Gaps = 9/61 (14%) Query: 163 GEKGPPRGGGRGGRG--------GGRGGGGRGGGRGGGFRGGRGG-GGGGFRGGRGGGFR 213 G +G GGG GG G GG GGGG GGG GGF G GG GGGGF GG GG Sbjct: 84 GGRGSGFGGGYGGGGFGGGGFGGGGFGGGGIGGGGFGGFGSGGGGFGGGGFGGGGYGGGY 143 Query: 214 G 214 G Sbjct: 144 G 144 Score = 53.5 bits (127), Expect = 1e-07 Identities = 31/54 (57%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 3 FRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRG 56 + GGG GG G GGGGF GG GG G GGGG F GGG GG G GGG G Sbjct: 94 YGGGGFGG--GGFGGGGFGGGGIGGGGFGGFGSGGGG-FGGGGFGGGGYGGGYG 144 Score = 53.1 bits (126), Expect = 2e-07 Identities = 29/49 (59%), Positives = 29/49 (59%), Gaps = 3/49 (6%) Query: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRG--GRGGGFRGRG 216 GG RGG GGG G GG G GGG G GGGGGG RG G GG G G Sbjct: 515 GGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGG-RGSYGSGGSSYGSG 562 Score = 52.8 bits (125), Expect = 2e-07 Identities = 33/75 (44%), Positives = 37/75 (49%), Gaps = 14/75 (18%) Query: 5 GGGRGGFNRGGGGGG----FNRGGSSNHFRGG----GGGGGG------GNFRGGGRGGFG 50 G G G + GGGGGG + GGSS GG GGGGGG G+ GG RGG G Sbjct: 533 GSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSG 592 Query: 51 RGGGRGGFNKGQDQG 65 GGG +G G Sbjct: 593 GGGGGSSGGRGSGGG 607 Score = 51.6 bits (122), Expect = 5e-07 Identities = 33/72 (45%), Positives = 33/72 (45%), Gaps = 25/72 (34%) Query: 170 GGGR----GGRGGGRGGGG---------------------RGGGRGGGFRGGRGGGGGGF 204 GGGR GG GG G GG RGGGRG GF GG GGGG G Sbjct: 42 GGGRFSSCGGGGGSFGAGGGFGSRSLVNLGGSKSISISVARGGGRGSGFGGGYGGGGFGG 101 Query: 205 RGGRGGGFRGRG 216 G GGGF G G Sbjct: 102 GGFGGGGFGGGG 113 Score = 50.8 bits (120), Expect = 9e-07 Identities = 28/55 (50%), Positives = 29/55 (52%), Gaps = 10/55 (18%) Query: 170 GGGRGGRGG--------GRGGGGRGGGRGGGFRG--GRGGGGGGFRGGRGGGFRG 214 GGG GGRG G GGG G G GGG G G G GG+RGG GGG G Sbjct: 543 GGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGG 597 Score = 50.1 bits (118), Expect = 1e-06 Identities = 37/86 (43%), Positives = 39/86 (45%), Gaps = 29/86 (33%) Query: 5 GGGRGGFNRGGGGGG-------------FNRGGS-------------SNHFRG--GGGGG 36 GGG G F+ GGGGG N GGS + F G GGGG Sbjct: 40 GGGGGRFSSCGGGGGSFGAGGGFGSRSLVNLGGSKSISISVARGGGRGSGFGGGYGGGGF 99 Query: 37 GGGNFRGGGRGGFG-RGGGRGGFNKG 61 GGG F GGG GG G GGG GGF G Sbjct: 100 GGGGFGGGGFGGGGIGGGGFGGFGSG 125 Score = 49.3 bits (116), Expect = 3e-06 Identities = 27/51 (52%), Positives = 28/51 (54%), Gaps = 4/51 (7%) Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216 G GG RGG GG GGGG GGRG G GG GG G RG GG + G Sbjct: 581 GSSSGGYRGGSGG--GGGGSSGGRGSG--GGSSGGSIGGRGSSSGGVKSSG 627 Score = 49.3 bits (116), Expect = 3e-06 Identities = 23/44 (52%), Positives = 24/44 (54%) Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRG 209 G RGG GG GG GG G GGG GG GGRG GG + G Sbjct: 585 GGYRGGSGGGGGGSSGGRGSGGGSSGGSIGGRGSSSGGVKSSGG 628 Score = 47.4 bits (111), Expect = 1e-05 Identities = 35/83 (42%), Positives = 37/83 (44%), Gaps = 26/83 (31%) Query: 5 GGGRGGFNRGGGGGG---FNRGGSSN-----------------HFRGGG---GGGGGGNF 41 GGG G F GGG G N GGS + + GGG GG GGG F Sbjct: 50 GGGGGSFGAGGGFGSRSLVNLGGSKSISISVARGGGRGSGFGGGYGGGGFGGGGFGGGGF 109 Query: 42 RGGGRGGFGRGG---GRGGFNKG 61 GGG GG G GG G GGF G Sbjct: 110 GGGGIGGGGFGGFGSGGGGFGGG 132 Score = 44.3 bits (103), Expect = 8e-05 Identities = 25/55 (45%), Positives = 28/55 (50%), Gaps = 5/55 (9%) Query: 2 SFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNF--RGGGRGGFGRGGG 54 S+ G G RGG GGG GG S+ RG GGG GG+ RG GG GG Sbjct: 577 SYGSGSSSGGYRGGSGGG---GGGSSGGRGSGGGSSGGSIGGRGSSSGGVKSSGG 628 Score = 43.5 bits (101), Expect = 1e-04 Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Query: 2 SFRGGGR--GGFNRGGGGG-GFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRG 56 S R G R GGF+ G G + R +S+ R GGGGG + GGG G FG GGG G Sbjct: 6 SSRSGYRSGGGFSSGSAGIINYQRRTTSSSTRRSGGGGGRFSSCGGGGGSFGAGGGFG 63 Score = 43.5 bits (101), Expect = 1e-04 Identities = 29/54 (53%), Positives = 29/54 (53%), Gaps = 8/54 (14%) Query: 3 FRGGGRGGFNRGGGG-GGFNRGGSSNHFRGGGGGGG-GGNFRGGGRGGFGRGGG 54 F GGG GG GGGG GGF GG GG GGGG GG GGG G GG Sbjct: 104 FGGGGFGGGGIGGGGFGGFGSGG------GGFGGGGFGGGGYGGGYGPVCPPGG 151 Score = 40.8 bits (94), Expect = 9e-04 Identities = 20/35 (57%), Positives = 20/35 (57%) Query: 177 GGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGG 211 GGG GGG GG GG G GGG G GG GGG Sbjct: 514 GGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGG 548 Score = 39.7 bits (91), Expect = 0.002 Identities = 34/102 (33%), Positives = 39/102 (38%), Gaps = 41/102 (40%) Query: 1 MSFRGGGRGGFNRGGGGGGFNRG----------GSSNHFRGGGG-----GGGGGNF---- 41 MS + R G+ GGG + G S+ GGGG GGGGG+F Sbjct: 1 MSRQFSSRSGYRSGGGFSSGSAGIINYQRRTTSSSTRRSGGGGGRFSSCGGGGGSFGAGG 60 Query: 42 ---------------------RGGGRG-GFGRGGGRGGFNKG 61 RGGGRG GFG G G GGF G Sbjct: 61 GFGSRSLVNLGGSKSISISVARGGGRGSGFGGGYGGGGFGGG 102 Score = 34.7 bits (78), Expect = 0.064 Identities = 24/60 (40%), Positives = 24/60 (40%), Gaps = 15/60 (25%) Query: 169 RGGGRGGRGGGRGGGG-------------RGGGRGGGFRGGRGGGGGGFRGGRGGGFRGR 215 R G R G G G G R G GGG GGGGG F G GGGF R Sbjct: 8 RSGYRSGGGFSSGSAGIINYQRRTTSSSTRRSGGGGGRFSSCGGGGGSF--GAGGGFGSR 65 Score = 32.3 bits (72), Expect = 0.32 Identities = 16/41 (39%), Positives = 19/41 (46%) Query: 25 SSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQG 65 S++H GGG GG G G GG G G G + G G Sbjct: 506 STSHTTISGGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGG 546 Score = 28.9 bits (63), Expect = 3.5 Identities = 21/52 (40%), Positives = 21/52 (40%), Gaps = 11/52 (21%) Query: 176 RGGGRGGGGRGGGRGGGFRGGR----------GGGGGGFRG-GRGGGFRGRG 216 R G R GGG G G R GGGGG F G GGG G G Sbjct: 8 RSGYRSGGGFSSGSAGIINYQRRTTSSSTRRSGGGGGRFSSCGGGGGSFGAG 59 Score = 27.7 bits (60), Expect = 7.8 Identities = 13/38 (34%), Positives = 17/38 (44%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFR 42 GG GG GGG G + GG + G GG + + Sbjct: 596 GGSSGGRGSGGGSSGGSIGGRGSSSGGVKSSGGSSSVK 633 >gi|34740329 heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens] Length = 378 Score = 60.8 bits (146), Expect = 8e-10 Identities = 33/51 (64%), Positives = 33/51 (64%), Gaps = 5/51 (9%) Query: 169 RGGGRG---GRGGGRGGGGRGGGRGGGF--RGGRGGGGGGFRGGRGGGFRG 214 RGGG G GRGG GGGG GRGG F RGG GGGGGG RG GGG G Sbjct: 216 RGGGSGNFMGRGGNFGGGGGNFGRGGNFGGRGGYGGGGGGSRGSYGGGDGG 266 Score = 59.3 bits (142), Expect = 2e-09 Identities = 38/73 (52%), Positives = 41/73 (56%), Gaps = 9/73 (12%) Query: 4 RGGGRGGF-----NRGGGGGGFNRGGSSNHFRGGGGGGGGGN--FRGGGRGGFGRGGGRG 56 RGGG G F N GGGGG F RGG+ RGG GGGGGG+ GGG GG+ GG G Sbjct: 216 RGGGSGNFMGRGGNFGGGGGNFGRGGNFGG-RGGYGGGGGGSRGSYGGGDGGYNGFGGDG 274 Query: 57 GFNKGQDQGPPER 69 G N G G R Sbjct: 275 G-NYGGGPGYSSR 286 Score = 58.9 bits (141), Expect = 3e-09 Identities = 31/61 (50%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQ 64 GGG GG+N GG GG GG RGG GGGG G G GG+G GGG G+N+G + Sbjct: 261 GGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPG--YGNQGGGYGGGGGYDGYNEGGNF 318 Query: 65 G 65 G Sbjct: 319 G 319 Score = 54.3 bits (129), Expect = 8e-08 Identities = 27/47 (57%), Positives = 29/47 (61%), Gaps = 2/47 (4%) Query: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFR--GGRGGGFRG 214 GGG GRGG GG G GG GGG RG GGG GG+ GG GG + G Sbjct: 233 GGGNFGRGGNFGGRGGYGGGGGGSRGSYGGGDGGYNGFGGDGGNYGG 279 Score = 53.5 bits (127), Expect = 1e-07 Identities = 32/62 (51%), Positives = 35/62 (56%), Gaps = 9/62 (14%) Query: 163 GEKGPPRGGGRGGRGGGRGG----GGRGGGRGGG----FRGGRGGGGGGFRGGRGGGFRG 214 G G GG RG GGG GG GG GG GGG RGG GGGG G+ G +GGG+ G Sbjct: 247 GGYGGGGGGSRGSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGY-GNQGGGYGG 305 Query: 215 RG 216 G Sbjct: 306 GG 307 Score = 52.4 bits (124), Expect = 3e-07 Identities = 30/55 (54%), Positives = 33/55 (60%), Gaps = 5/55 (9%) Query: 10 GFNRGGGGGGFNRGGSSNHFRGGGGG-GGGGNFRGGGRGGFGRGGG--RGGFNKG 61 G RG GGG N G +F GGGG G GGNF GGRGG+G GGG RG + G Sbjct: 211 GSQRGRGGGSGNFMGRGGNFGGGGGNFGRGGNF--GGRGGYGGGGGGSRGSYGGG 263 Score = 51.2 bits (121), Expect = 7e-07 Identities = 30/53 (56%), Positives = 32/53 (60%), Gaps = 4/53 (7%) Query: 169 RGGGRGGRGGGRG--GGGRGGGRGGGFRGGRGGGGGGF--RGGRGGGFRGRGH 217 RGG GG GG RG GGG GG G G GG GGG G+ RGG GGG G G+ Sbjct: 246 RGGYGGGGGGSRGSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGN 298 Score = 48.1 bits (113), Expect = 6e-06 Identities = 32/85 (37%), Positives = 40/85 (47%), Gaps = 29/85 (34%) Query: 3 FRGGGRGGFNRGGG---GGGFNRGGSSNHFRGGGGGGGG-----GNFRG----------- 43 + GGG G N+GGG GGG++ +F GG GGGG GN+ G Sbjct: 289 YGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGPMKG 348 Query: 44 ---GGR-------GGFGRGGGRGGF 58 GGR GG+G GGG GG+ Sbjct: 349 GSFGGRSSGSPYGGGYGSGGGSGGY 373 Score = 47.8 bits (112), Expect = 7e-06 Identities = 30/64 (46%), Positives = 34/64 (53%), Gaps = 5/64 (7%) Query: 5 GGGRGGFNRGG-GGGGFNRGGSSNHFRGGGGGGG---GGNFRGGGRGGFGRGGGRGGFNK 60 GGG G +RGG GGGG G + GGGG G GGNF GG GG G G ++ Sbjct: 278 GGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGNYNDFGNYS- 336 Query: 61 GQDQ 64 GQ Q Sbjct: 337 GQQQ 340 Score = 45.4 bits (106), Expect = 4e-05 Identities = 26/52 (50%), Positives = 29/52 (55%), Gaps = 4/52 (7%) Query: 170 GGGRGGRGGGRG----GGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRGH 217 GG G GGG G GG GGG G G +GG GGGGG+ G GG G G+ Sbjct: 271 GGDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGN 322 Score = 43.1 bits (100), Expect = 2e-04 Identities = 25/46 (54%), Positives = 27/46 (58%), Gaps = 7/46 (15%) Query: 22 RGGSSNHFRGGGGG---GGGGNFRGGGRGGFGRG---GGRGGFNKG 61 + S RGGG G G GGNF GGG G FGRG GGRGG+ G Sbjct: 208 QSAGSQRGRGGGSGNFMGRGGNF-GGGGGNFGRGGNFGGRGGYGGG 252 Score = 43.1 bits (100), Expect = 2e-04 Identities = 26/69 (37%), Positives = 30/69 (43%), Gaps = 23/69 (33%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNH----------------FRGGGGGG-------GGGNF 41 GGG G+N GG GG N GG N+ +GG GG GGG Sbjct: 306 GGGYDGYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGPMKGGSFGGRSSGSPYGGGYG 365 Query: 42 RGGGRGGFG 50 GGG GG+G Sbjct: 366 SGGGSGGYG 374 Score = 42.4 bits (98), Expect = 3e-04 Identities = 27/55 (49%), Positives = 29/55 (52%), Gaps = 6/55 (10%) Query: 163 GEKGPPRGGGRG-GRGGGRGGGGRG-GGRGGGFRGGRG----GGGGGFRGGRGGG 211 G G GGG G GG GGGG G G +GGG+ GG G GG F GG GG Sbjct: 271 GGDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGG 325 Score = 41.2 bits (95), Expect = 7e-04 Identities = 24/56 (42%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRG-GRGGGGGGFRGGRGGGFRGRGH 217 G G GG GG G G G G G G GGG+ G GG GG G GG + G+ Sbjct: 279 GGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGNYNDFGN 334 Score = 40.0 bits (92), Expect = 0.002 Identities = 22/34 (64%), Positives = 22/34 (64%), Gaps = 2/34 (5%) Query: 184 GRGGGRGGGF-RGGRGGGGGGFRGGRGGGFRGRG 216 GRGGG G RGG GGGGG GRGG F GRG Sbjct: 215 GRGGGSGNFMGRGGNFGGGGG-NFGRGGNFGGRG 247 Score = 35.0 bits (79), Expect = 0.049 Identities = 29/81 (35%), Positives = 33/81 (40%), Gaps = 29/81 (35%) Query: 163 GEKGPPRGGGRG----GRGGGRGGGGRGGG--------------------RGGGFRGGRG 198 G +G GGG G GG GGG GGG +GG F GGR Sbjct: 297 GNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGPMKGGSF-GGRS 355 Query: 199 GG---GGGF-RGGRGGGFRGR 215 G GGG+ GG GG+ R Sbjct: 356 SGSPYGGGYGSGGGSGGYGSR 376 Score = 33.1 bits (74), Expect = 0.19 Identities = 18/33 (54%), Positives = 20/33 (60%), Gaps = 3/33 (9%) Query: 33 GGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQG 65 G GGG GNF G G G FG GGG F +G + G Sbjct: 215 GRGGGSGNFMGRG-GNFGGGGGN--FGRGGNFG 244 Score = 31.6 bits (70), Expect = 0.54 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 9/43 (20%) Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGR 208 GP +GG GGR G GGG+ G GGG GG+ R Sbjct: 344 GPMKGGSFGGRSSG-------SPYGGGY--GSGGGSGGYGSRR 377 >gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens] Length = 589 Score = 60.5 bits (145), Expect = 1e-09 Identities = 35/61 (57%), Positives = 37/61 (60%), Gaps = 9/61 (14%) Query: 163 GEKGPPRGGGRGG--RGGGRGG---GGRGGGRGGGFRGGRGGGGGGFRGG----RGGGFR 213 G G GGG GG GGG GG GG GG RGGG+ G RGGG GG RGG RGGG+ Sbjct: 433 GYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYG 492 Query: 214 G 214 G Sbjct: 493 G 493 Score = 60.5 bits (145), Expect = 1e-09 Identities = 34/60 (56%), Positives = 35/60 (58%), Gaps = 3/60 (5%) Query: 160 RPPGEKGPPRGGGRGGRGGGRGGGGRGGGRG---GGFRGGRGGGGGGFRGGRGGGFRGRG 216 R G G RGGG GG GG GG RGGG G GG+ G RGGG GG RGG GG G G Sbjct: 447 RSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYG 506 Score = 58.5 bits (140), Expect = 4e-09 Identities = 35/57 (61%), Positives = 36/57 (63%), Gaps = 4/57 (7%) Query: 163 GEKGPPRGGGRGG-RGGGRGG--GGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216 G G RGGG GG RGGG GG GG GG RGGG+ G RGG GG RGG GG G G Sbjct: 458 GGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGD-RGGYGGDRGGYG 513 Score = 58.2 bits (139), Expect = 5e-09 Identities = 33/69 (47%), Positives = 35/69 (50%), Gaps = 20/69 (28%) Query: 169 RGGGRGGRGGGRGGGGRGGGR--------------------GGGFRGGRGGGGGGFRGGR 208 RGG RGG GG R GGG GG R GGG+ G RGGG GG RGG Sbjct: 408 RGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGG 467 Query: 209 GGGFRGRGH 217 GG RG G+ Sbjct: 468 YGGDRGGGY 476 Score = 58.2 bits (139), Expect = 5e-09 Identities = 33/59 (55%), Positives = 36/59 (61%), Gaps = 3/59 (5%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFG--RGGGRGGFNKG 61 GGG GG +R GGG G +RGG RGGG GG G GG RGG+G RGGG GG G Sbjct: 440 GGGYGG-DRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGG 497 Score = 58.2 bits (139), Expect = 5e-09 Identities = 34/58 (58%), Positives = 37/58 (63%), Gaps = 5/58 (8%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRG--GGFRGGRGGGGGGFRGGRG--GGFRGRG 216 G++G GG RGG GG R GGG GG RG GG RGG GG GG+ G RG GG R RG Sbjct: 470 GDRGGGYGGDRGGYGGDR-GGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRG 526 Score = 56.6 bits (135), Expect = 2e-08 Identities = 33/65 (50%), Positives = 37/65 (56%), Gaps = 13/65 (20%) Query: 163 GEKGPPRGGGRGGR----GGGRGGGGRGGGR--GGGFRGGRGGG-------GGGFRGGRG 209 GE+G GGRGG GG R GGG GG R GGG+ G R GG GGG+ G RG Sbjct: 398 GERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRG 457 Query: 210 GGFRG 214 GG+ G Sbjct: 458 GGYGG 462 Score = 56.6 bits (135), Expect = 2e-08 Identities = 33/58 (56%), Positives = 34/58 (58%), Gaps = 4/58 (6%) Query: 163 GEKGPPRGGGRGG-RGGGRGG---GGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216 G G GGG GG RGGG GG GG GG RGGG+ G RGG GG GG GG G G Sbjct: 442 GYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYG 499 Score = 56.2 bits (134), Expect = 2e-08 Identities = 31/56 (55%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Query: 160 RPPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGR 215 R G G RGGG G GG R GG G GGG+ G RGGG GG RGG GG GR Sbjct: 523 RSRGGYGGDRGGG-SGYGGDRSGGYGGDRSGGGYGGDRGGGYGGDRGGYGGKMGGR 577 Score = 55.8 bits (133), Expect = 3e-08 Identities = 36/67 (53%), Positives = 42/67 (62%), Gaps = 10/67 (14%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF-----GRGGGRGGF 58 RGGG GG +RGGG GG +RGG RGG GG GG + GG RGG+ G GG RGG+ Sbjct: 456 RGGGYGG-DRGGGYGG-DRGGGYGGDRGGYGGDRGGGY-GGDRGGYGGDRGGYGGDRGGY 512 Query: 59 NKGQDQG 65 G D+G Sbjct: 513 --GGDRG 517 Score = 55.8 bits (133), Expect = 3e-08 Identities = 34/59 (57%), Positives = 35/59 (59%), Gaps = 7/59 (11%) Query: 163 GEKGPPRGG-----GRGGRGGGRGGG-GRGGGRGGGFRGGRGGGG-GGFRGGRGGGFRG 214 G G RGG RGG GG RGGG G GG R GG+ G R GGG GG RGG GG RG Sbjct: 510 GGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGGDRGGGYGGDRG 568 Score = 55.1 bits (131), Expect = 5e-08 Identities = 32/61 (52%), Positives = 34/61 (55%), Gaps = 3/61 (4%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQ 64 GGG G GGG GG GG RGGG GG G GG RGG G GG RGG+ G D+ Sbjct: 431 GGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGG-GYGGDRGGY--GGDR 487 Query: 65 G 65 G Sbjct: 488 G 488 Score = 55.1 bits (131), Expect = 5e-08 Identities = 31/64 (48%), Positives = 35/64 (54%), Gaps = 12/64 (18%) Query: 163 GEKGPPRGGGRGGRGGGRGG-----GGRGGGRGG-------GFRGGRGGGGGGFRGGRGG 210 G++G GG RGG GG RGG GG GG RGG G GG GGG G+ G R G Sbjct: 485 GDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSG 544 Query: 211 GFRG 214 G+ G Sbjct: 545 GYGG 548 Score = 54.3 bits (129), Expect = 8e-08 Identities = 35/61 (57%), Positives = 40/61 (65%), Gaps = 6/61 (9%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQ 64 GGG GG +RGGG GG +RGG RGGG GG G + GG RGG G GG RGG+ G D+ Sbjct: 449 GGGYGG-DRGGGYGG-DRGGGYGGDRGGGYGGDRGGY-GGDRGG-GYGGDRGGY--GGDR 502 Query: 65 G 65 G Sbjct: 503 G 503 Score = 53.1 bits (126), Expect = 2e-07 Identities = 34/67 (50%), Positives = 41/67 (61%), Gaps = 9/67 (13%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF-----GRGGGRGGF 58 RGGG GG +RGGG GG +RGG RGGG GG G + GG RGG+ G GG RGG+ Sbjct: 464 RGGGYGG-DRGGGYGG-DRGGYGGD-RGGGYGGDRGGY-GGDRGGYGGDRGGYGGDRGGY 519 Query: 59 NKGQDQG 65 + +G Sbjct: 520 GGDRSRG 526 Score = 53.1 bits (126), Expect = 2e-07 Identities = 34/62 (54%), Positives = 35/62 (56%), Gaps = 8/62 (12%) Query: 163 GEKGPPRGGGRGGRGGGRGG--GGRGGGRG--GGFRGGRGGGGGGFRGGRG----GGFRG 214 G G RGG G RGGG GG GG GG RG GG RGG GG GG+ G R GG RG Sbjct: 474 GGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRG 533 Query: 215 RG 216 G Sbjct: 534 GG 535 Score = 52.4 bits (124), Expect = 3e-07 Identities = 30/59 (50%), Positives = 33/59 (55%), Gaps = 4/59 (6%) Query: 159 PRPPGEK---GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214 PRP + G RG G GG G RG GGRGG R GG+ G R GGG G GGG+ G Sbjct: 379 PRPEDSRPSGGDFRGRGYGGERGYRGRGGRGGDR-GGYGGDRSGGGYGGDRSSGGGYSG 436 Score = 51.2 bits (121), Expect = 7e-07 Identities = 37/75 (49%), Positives = 42/75 (56%), Gaps = 14/75 (18%) Query: 4 RGGGRGGF--NRGGGGGGFNR--GGSSNHFRGGGG------GGGGGNFRGGGRGGF---G 50 RGG RGG+ +R GGG G +R GG + R GGG GGG G RGGG GG G Sbjct: 408 RGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGG 467 Query: 51 RGGGRGGFNKGQDQG 65 GG RGG G D+G Sbjct: 468 YGGDRGG-GYGGDRG 481 Score = 50.4 bits (119), Expect = 1e-06 Identities = 31/63 (49%), Positives = 36/63 (57%), Gaps = 3/63 (4%) Query: 5 GGGRGGFNRGGGGGGFNRGG-SSNHFRGG-GGGGGGGNFRGGGRGGFGRGGGRGGFNKGQ 62 GG RGG+ GG G +RGG + RGG GG GGG+ GG R G G GG R G G Sbjct: 499 GGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSG-GYGGDRSGGGYGG 557 Query: 63 DQG 65 D+G Sbjct: 558 DRG 560 Score = 50.4 bits (119), Expect = 1e-06 Identities = 32/65 (49%), Positives = 36/65 (55%), Gaps = 9/65 (13%) Query: 5 GGGRGGF--NRGGGGGGFNRGGSSNHFRGGGGGGG------GGNFRGGGRGGFGRGGGRG 56 GG RGG+ +RGG GG +RGG GG G GG GG+ GGG GG RGGG G Sbjct: 506 GGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGG-DRGGGYG 564 Query: 57 GFNKG 61 G G Sbjct: 565 GDRGG 569 Score = 50.1 bits (118), Expect = 1e-06 Identities = 33/63 (52%), Positives = 39/63 (61%), Gaps = 8/63 (12%) Query: 5 GGGRGGF--NRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQ 62 GG RGG+ +RGGG GG +RGG RGG GG GG GG RGG+G RGG+ G Sbjct: 477 GGDRGGYGGDRGGGYGG-DRGGYGGD-RGGYGGDRGG--YGGDRGGYGGDRSRGGY--GG 530 Query: 63 DQG 65 D+G Sbjct: 531 DRG 533 Score = 48.5 bits (114), Expect = 4e-06 Identities = 32/66 (48%), Positives = 34/66 (51%), Gaps = 6/66 (9%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGG----GGGGNFRGGGRG-GFGRGGGRGGFN 59 GG RGG+ GG G +RGG RGG GG GG G RGGG G G R GG GG Sbjct: 492 GGDRGGYGGDRGGYGGDRGGYGGD-RGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDR 550 Query: 60 KGQDQG 65 G G Sbjct: 551 SGGGYG 556 Score = 47.8 bits (112), Expect = 7e-06 Identities = 35/76 (46%), Positives = 38/76 (50%), Gaps = 14/76 (18%) Query: 3 FRGGGRGGFN--RGGGGGGFNRGGSSNHFRGGG-------GGGGGGNFRGGG----RGGF 49 FRG G GG RG GG G +RGG GGG GGG G+ GGG R G Sbjct: 391 FRGRGYGGERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGG 450 Query: 50 GRGGGRGGFNKGQDQG 65 G GG RGG G D+G Sbjct: 451 GYGGDRGG-GYGGDRG 465 Score = 47.8 bits (112), Expect = 7e-06 Identities = 29/64 (45%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGG--GGNFRGGGRGGF-GRGGGRGGFNKGQ 62 GG GG GG G G +R G R GGG GG GG + GG RGG+ G+ GGR + Q Sbjct: 526 GGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGGDRGGGY-GGDRGGYGGKMGGRNDYRNDQ 584 Query: 63 DQGP 66 P Sbjct: 585 RNRP 588 Score = 46.6 bits (109), Expect = 2e-05 Identities = 26/58 (44%), Positives = 27/58 (46%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61 RGGG GG G GG GG + G GG GG RGG G G G G GG G Sbjct: 487 RGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSG 544 Score = 43.9 bits (102), Expect = 1e-04 Identities = 77/278 (27%), Positives = 94/278 (33%), Gaps = 90/278 (32%) Query: 9 GGFNRGGGG---GGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQD-- 63 G NRG GG GG RGG RG G GG+ RGGF GG + D Sbjct: 168 GEDNRGYGGSQGGGRGRGGYDKDGRGPMTGSSGGD-----RGGFKNFGGHRDYGPRTDAD 222 Query: 64 -------------QGPPERVVL--LGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKE 108 QG E V +GEF I T + P N + + Sbjct: 223 SESDNSDNNTIFVQGLGEGVSTDQVGEFFK----QIGIIKTNKKTGKPMINLYTDKDTGK 278 Query: 109 QIGKVDEIFGQLRDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGEKGPP 168 G+ F ++ + ++F+ + K+ R RP +G Sbjct: 279 PKGEATVSFDDPPSAKAAIDWFDG---------KEFHGNIIKVSFATR---RPEFMRGGG 326 Query: 169 RGGGRGGRGGGRGGG---GRGG-------------------------------------- 187 GGGR GRGG RG G GRGG Sbjct: 327 SGGGRRGRGGYRGRGGFQGRGGDPKSGDWVCPNPSCGNMNFARRNSCNQCNEPRPEDSRP 386 Query: 188 ------GRG-GGFRGGRG-GGGGGFRGGRGGGFRGRGH 217 GRG GG RG RG GG GG RGG GG G G+ Sbjct: 387 SGGDFRGRGYGGERGYRGRGGRGGDRGGYGGDRSGGGY 424 Score = 42.4 bits (98), Expect = 3e-04 Identities = 27/54 (50%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 164 EKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRG-GGFRGRG 216 E P GG GRG GG G RG G RGG GG GG R G G GG R G Sbjct: 378 EPRPEDSRPSGGDFRGRGYGGERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSG 431 Score = 38.1 bits (87), Expect = 0.006 Identities = 34/100 (34%), Positives = 37/100 (37%), Gaps = 38/100 (38%) Query: 4 RGGGRGGFNRGGGG----GGFN-RGGSS--------------------------NHFRGG 32 RGGG GG RG GG GGF RGG N R Sbjct: 323 RGGGSGGGRRGRGGYRGRGGFQGRGGDPKSGDWVCPNPSCGNMNFARRNSCNQCNEPRPE 382 Query: 33 GGGGGGGNFRGGGRGGF-------GRGGGRGGFNKGQDQG 65 GG+FRG G GG GRGG RGG+ + G Sbjct: 383 DSRPSGGDFRGRGYGGERGYRGRGGRGGDRGGYGGDRSGG 422 Score = 37.0 bits (84), Expect = 0.013 Identities = 57/223 (25%), Positives = 79/223 (35%), Gaps = 67/223 (30%) Query: 21 NRGGSSNHFRGG--GGGGGGGNFRGGGRGGF--GRGGGRGGFNK---GQDQGPPERVVLL 73 +R G N GG GGG G G + GRG GG RGGF +D GP Sbjct: 165 SRYGEDNRGYGGSQGGGRGRGGYDKDGRGPMTGSSGGDRGGFKNFGGHRDYGP------- 217 Query: 74 GEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVDEIFGQLRDFYFSVKLSENM 133 + D N ++++ + D Q+ +F+ + + + Sbjct: 218 -------------RTDADSESDNSDNNTIFVQGLGEGVSTD----QVGEFFKQIGIIKTN 260 Query: 134 KASSFKKLQKFYIDPYKLLPLQRFLPRPPGE-----KGPPRGGGRGGRGGGRGGGG---- 184 K + K + Y D + +P GE PP G+ G Sbjct: 261 KKTG-KPMINLYTD--------KDTGKPKGEATVSFDDPPSAKAAIDWFDGKEFHGNIIK 311 Query: 185 -----------RGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216 RGGG GGG R G GG+RG GGF+GRG Sbjct: 312 VSFATRRPEFMRGGGSGGGRR-----GRGGYRG--RGGFQGRG 347 Score = 36.6 bits (83), Expect = 0.017 Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 3/45 (6%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGG--GGGGNFRGGGR 46 R GG GG GGG GG +RGG RGG GG GG ++R R Sbjct: 542 RSGGYGGDRSGGGYGG-DRGGGYGGDRGGYGGKMGGRNDYRNDQR 585 >gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens] Length = 592 Score = 60.5 bits (145), Expect = 1e-09 Identities = 35/61 (57%), Positives = 37/61 (60%), Gaps = 9/61 (14%) Query: 163 GEKGPPRGGGRGG--RGGGRGG---GGRGGGRGGGFRGGRGGGGGGFRGG----RGGGFR 213 G G GGG GG GGG GG GG GG RGGG+ G RGGG GG RGG RGGG+ Sbjct: 436 GYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYG 495 Query: 214 G 214 G Sbjct: 496 G 496 Score = 60.5 bits (145), Expect = 1e-09 Identities = 34/60 (56%), Positives = 35/60 (58%), Gaps = 3/60 (5%) Query: 160 RPPGEKGPPRGGGRGGRGGGRGGGGRGGGRG---GGFRGGRGGGGGGFRGGRGGGFRGRG 216 R G G RGGG GG GG GG RGGG G GG+ G RGGG GG RGG GG G G Sbjct: 450 RSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYG 509 Score = 58.5 bits (140), Expect = 4e-09 Identities = 35/57 (61%), Positives = 36/57 (63%), Gaps = 4/57 (7%) Query: 163 GEKGPPRGGGRGG-RGGGRGG--GGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216 G G RGGG GG RGGG GG GG GG RGGG+ G RGG GG RGG GG G G Sbjct: 461 GGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGD-RGGYGGDRGGYG 516 Score = 58.2 bits (139), Expect = 5e-09 Identities = 33/69 (47%), Positives = 35/69 (50%), Gaps = 20/69 (28%) Query: 169 RGGGRGGRGGGRGGGGRGGGR--------------------GGGFRGGRGGGGGGFRGGR 208 RGG RGG GG R GGG GG R GGG+ G RGGG GG RGG Sbjct: 411 RGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGG 470 Query: 209 GGGFRGRGH 217 GG RG G+ Sbjct: 471 YGGDRGGGY 479 Score = 58.2 bits (139), Expect = 5e-09 Identities = 33/59 (55%), Positives = 36/59 (61%), Gaps = 3/59 (5%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFG--RGGGRGGFNKG 61 GGG GG +R GGG G +RGG RGGG GG G GG RGG+G RGGG GG G Sbjct: 443 GGGYGG-DRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGG 500 Score = 58.2 bits (139), Expect = 5e-09 Identities = 34/58 (58%), Positives = 37/58 (63%), Gaps = 5/58 (8%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRG--GGFRGGRGGGGGGFRGGRG--GGFRGRG 216 G++G GG RGG GG R GGG GG RG GG RGG GG GG+ G RG GG R RG Sbjct: 473 GDRGGGYGGDRGGYGGDR-GGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRG 529 Score = 56.6 bits (135), Expect = 2e-08 Identities = 33/65 (50%), Positives = 37/65 (56%), Gaps = 13/65 (20%) Query: 163 GEKGPPRGGGRGGR----GGGRGGGGRGGGR--GGGFRGGRGGG-------GGGFRGGRG 209 GE+G GGRGG GG R GGG GG R GGG+ G R GG GGG+ G RG Sbjct: 401 GERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRG 460 Query: 210 GGFRG 214 GG+ G Sbjct: 461 GGYGG 465 Score = 56.6 bits (135), Expect = 2e-08 Identities = 33/58 (56%), Positives = 34/58 (58%), Gaps = 4/58 (6%) Query: 163 GEKGPPRGGGRGG-RGGGRGG---GGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216 G G GGG GG RGGG GG GG GG RGGG+ G RGG GG GG GG G G Sbjct: 445 GYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYG 502 Score = 56.2 bits (134), Expect = 2e-08 Identities = 31/56 (55%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Query: 160 RPPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGR 215 R G G RGGG G GG R GG G GGG+ G RGGG GG RGG GG GR Sbjct: 526 RSRGGYGGDRGGG-SGYGGDRSGGYGGDRSGGGYGGDRGGGYGGDRGGYGGKMGGR 580 Score = 55.8 bits (133), Expect = 3e-08 Identities = 36/67 (53%), Positives = 42/67 (62%), Gaps = 10/67 (14%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF-----GRGGGRGGF 58 RGGG GG +RGGG GG +RGG RGG GG GG + GG RGG+ G GG RGG+ Sbjct: 459 RGGGYGG-DRGGGYGG-DRGGGYGGDRGGYGGDRGGGY-GGDRGGYGGDRGGYGGDRGGY 515 Query: 59 NKGQDQG 65 G D+G Sbjct: 516 --GGDRG 520 Score = 55.8 bits (133), Expect = 3e-08 Identities = 34/59 (57%), Positives = 35/59 (59%), Gaps = 7/59 (11%) Query: 163 GEKGPPRGG-----GRGGRGGGRGGG-GRGGGRGGGFRGGRGGGG-GGFRGGRGGGFRG 214 G G RGG RGG GG RGGG G GG R GG+ G R GGG GG RGG GG RG Sbjct: 513 GGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGGDRGGGYGGDRG 571 Score = 55.1 bits (131), Expect = 5e-08 Identities = 32/61 (52%), Positives = 34/61 (55%), Gaps = 3/61 (4%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQ 64 GGG G GGG GG GG RGGG GG G GG RGG G GG RGG+ G D+ Sbjct: 434 GGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGG-GYGGDRGGY--GGDR 490 Query: 65 G 65 G Sbjct: 491 G 491 Score = 55.1 bits (131), Expect = 5e-08 Identities = 31/64 (48%), Positives = 35/64 (54%), Gaps = 12/64 (18%) Query: 163 GEKGPPRGGGRGGRGGGRGG-----GGRGGGRGG-------GFRGGRGGGGGGFRGGRGG 210 G++G GG RGG GG RGG GG GG RGG G GG GGG G+ G R G Sbjct: 488 GDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSG 547 Query: 211 GFRG 214 G+ G Sbjct: 548 GYGG 551 Score = 54.3 bits (129), Expect = 8e-08 Identities = 35/61 (57%), Positives = 40/61 (65%), Gaps = 6/61 (9%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQ 64 GGG GG +RGGG GG +RGG RGGG GG G + GG RGG G GG RGG+ G D+ Sbjct: 452 GGGYGG-DRGGGYGG-DRGGGYGGDRGGGYGGDRGGY-GGDRGG-GYGGDRGGY--GGDR 505 Query: 65 G 65 G Sbjct: 506 G 506 Score = 53.1 bits (126), Expect = 2e-07 Identities = 34/67 (50%), Positives = 41/67 (61%), Gaps = 9/67 (13%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF-----GRGGGRGGF 58 RGGG GG +RGGG GG +RGG RGGG GG G + GG RGG+ G GG RGG+ Sbjct: 467 RGGGYGG-DRGGGYGG-DRGGYGGD-RGGGYGGDRGGY-GGDRGGYGGDRGGYGGDRGGY 522 Query: 59 NKGQDQG 65 + +G Sbjct: 523 GGDRSRG 529 Score = 53.1 bits (126), Expect = 2e-07 Identities = 34/62 (54%), Positives = 35/62 (56%), Gaps = 8/62 (12%) Query: 163 GEKGPPRGGGRGGRGGGRGG--GGRGGGRG--GGFRGGRGGGGGGFRGGRG----GGFRG 214 G G RGG G RGGG GG GG GG RG GG RGG GG GG+ G R GG RG Sbjct: 477 GGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRG 536 Query: 215 RG 216 G Sbjct: 537 GG 538 Score = 52.4 bits (124), Expect = 3e-07 Identities = 30/59 (50%), Positives = 33/59 (55%), Gaps = 4/59 (6%) Query: 159 PRPPGEK---GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214 PRP + G RG G GG G RG GGRGG R GG+ G R GGG G GGG+ G Sbjct: 382 PRPEDSRPSGGDFRGRGYGGERGYRGRGGRGGDR-GGYGGDRSGGGYGGDRSSGGGYSG 439 Score = 51.2 bits (121), Expect = 7e-07 Identities = 37/75 (49%), Positives = 42/75 (56%), Gaps = 14/75 (18%) Query: 4 RGGGRGGF--NRGGGGGGFNR--GGSSNHFRGGGG------GGGGGNFRGGGRGGF---G 50 RGG RGG+ +R GGG G +R GG + R GGG GGG G RGGG GG G Sbjct: 411 RGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGG 470 Query: 51 RGGGRGGFNKGQDQG 65 GG RGG G D+G Sbjct: 471 YGGDRGG-GYGGDRG 484 Score = 50.4 bits (119), Expect = 1e-06 Identities = 31/63 (49%), Positives = 36/63 (57%), Gaps = 3/63 (4%) Query: 5 GGGRGGFNRGGGGGGFNRGG-SSNHFRGG-GGGGGGGNFRGGGRGGFGRGGGRGGFNKGQ 62 GG RGG+ GG G +RGG + RGG GG GGG+ GG R G G GG R G G Sbjct: 502 GGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSG-GYGGDRSGGGYGG 560 Query: 63 DQG 65 D+G Sbjct: 561 DRG 563 Score = 50.4 bits (119), Expect = 1e-06 Identities = 32/65 (49%), Positives = 36/65 (55%), Gaps = 9/65 (13%) Query: 5 GGGRGGF--NRGGGGGGFNRGGSSNHFRGGGGGGG------GGNFRGGGRGGFGRGGGRG 56 GG RGG+ +RGG GG +RGG GG G GG GG+ GGG GG RGGG G Sbjct: 509 GGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGG-DRGGGYG 567 Query: 57 GFNKG 61 G G Sbjct: 568 GDRGG 572 Score = 50.1 bits (118), Expect = 1e-06 Identities = 33/63 (52%), Positives = 39/63 (61%), Gaps = 8/63 (12%) Query: 5 GGGRGGF--NRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQ 62 GG RGG+ +RGGG GG +RGG RGG GG GG GG RGG+G RGG+ G Sbjct: 480 GGDRGGYGGDRGGGYGG-DRGGYGGD-RGGYGGDRGG--YGGDRGGYGGDRSRGGY--GG 533 Query: 63 DQG 65 D+G Sbjct: 534 DRG 536 Score = 48.5 bits (114), Expect = 4e-06 Identities = 32/66 (48%), Positives = 34/66 (51%), Gaps = 6/66 (9%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGG----GGGGNFRGGGRG-GFGRGGGRGGFN 59 GG RGG+ GG G +RGG RGG GG GG G RGGG G G R GG GG Sbjct: 495 GGDRGGYGGDRGGYGGDRGGYGGD-RGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDR 553 Query: 60 KGQDQG 65 G G Sbjct: 554 SGGGYG 559 Score = 47.8 bits (112), Expect = 7e-06 Identities = 35/76 (46%), Positives = 38/76 (50%), Gaps = 14/76 (18%) Query: 3 FRGGGRGGFN--RGGGGGGFNRGGSSNHFRGGG-------GGGGGGNFRGGG----RGGF 49 FRG G GG RG GG G +RGG GGG GGG G+ GGG R G Sbjct: 394 FRGRGYGGERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGG 453 Query: 50 GRGGGRGGFNKGQDQG 65 G GG RGG G D+G Sbjct: 454 GYGGDRGG-GYGGDRG 468 Score = 47.8 bits (112), Expect = 7e-06 Identities = 29/64 (45%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGG--GGNFRGGGRGGF-GRGGGRGGFNKGQ 62 GG GG GG G G +R G R GGG GG GG + GG RGG+ G+ GGR + Q Sbjct: 529 GGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGGDRGGGY-GGDRGGYGGKMGGRNDYRNDQ 587 Query: 63 DQGP 66 P Sbjct: 588 RNRP 591 Score = 46.6 bits (109), Expect = 2e-05 Identities = 26/58 (44%), Positives = 27/58 (46%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61 RGGG GG G GG GG + G GG GG RGG G G G G GG G Sbjct: 490 RGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSG 547 Score = 43.9 bits (102), Expect = 1e-04 Identities = 77/278 (27%), Positives = 94/278 (33%), Gaps = 90/278 (32%) Query: 9 GGFNRGGGG---GGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQD-- 63 G NRG GG GG RGG RG G GG+ RGGF GG + D Sbjct: 171 GEDNRGYGGSQGGGRGRGGYDKDGRGPMTGSSGGD-----RGGFKNFGGHRDYGPRTDAD 225 Query: 64 -------------QGPPERVVL--LGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKE 108 QG E V +GEF I T + P N + + Sbjct: 226 SESDNSDNNTIFVQGLGEGVSTDQVGEFFK----QIGIIKTNKKTGKPMINLYTDKDTGK 281 Query: 109 QIGKVDEIFGQLRDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGEKGPP 168 G+ F ++ + ++F+ + K+ R RP +G Sbjct: 282 PKGEATVSFDDPPSAKAAIDWFDG---------KEFHGNIIKVSFATR---RPEFMRGGG 329 Query: 169 RGGGRGGRGGGRGGG---GRGG-------------------------------------- 187 GGGR GRGG RG G GRGG Sbjct: 330 SGGGRRGRGGYRGRGGFQGRGGDPKSGDWVCPNPSCGNMNFARRNSCNQCNEPRPEDSRP 389 Query: 188 ------GRG-GGFRGGRG-GGGGGFRGGRGGGFRGRGH 217 GRG GG RG RG GG GG RGG GG G G+ Sbjct: 390 SGGDFRGRGYGGERGYRGRGGRGGDRGGYGGDRSGGGY 427 Score = 42.4 bits (98), Expect = 3e-04 Identities = 27/54 (50%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 164 EKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRG-GGFRGRG 216 E P GG GRG GG G RG G RGG GG GG R G G GG R G Sbjct: 381 EPRPEDSRPSGGDFRGRGYGGERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSG 434 Score = 38.1 bits (87), Expect = 0.006 Identities = 34/100 (34%), Positives = 37/100 (37%), Gaps = 38/100 (38%) Query: 4 RGGGRGGFNRGGGG----GGFN-RGGSS--------------------------NHFRGG 32 RGGG GG RG GG GGF RGG N R Sbjct: 326 RGGGSGGGRRGRGGYRGRGGFQGRGGDPKSGDWVCPNPSCGNMNFARRNSCNQCNEPRPE 385 Query: 33 GGGGGGGNFRGGGRGGF-------GRGGGRGGFNKGQDQG 65 GG+FRG G GG GRGG RGG+ + G Sbjct: 386 DSRPSGGDFRGRGYGGERGYRGRGGRGGDRGGYGGDRSGG 425 Score = 37.0 bits (84), Expect = 0.013 Identities = 57/223 (25%), Positives = 79/223 (35%), Gaps = 67/223 (30%) Query: 21 NRGGSSNHFRGG--GGGGGGGNFRGGGRGGF--GRGGGRGGFNK---GQDQGPPERVVLL 73 +R G N GG GGG G G + GRG GG RGGF +D GP Sbjct: 168 SRYGEDNRGYGGSQGGGRGRGGYDKDGRGPMTGSSGGDRGGFKNFGGHRDYGP------- 220 Query: 74 GEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVDEIFGQLRDFYFSVKLSENM 133 + D N ++++ + D Q+ +F+ + + + Sbjct: 221 -------------RTDADSESDNSDNNTIFVQGLGEGVSTD----QVGEFFKQIGIIKTN 263 Query: 134 KASSFKKLQKFYIDPYKLLPLQRFLPRPPGE-----KGPPRGGGRGGRGGGRGGGG---- 184 K + K + Y D + +P GE PP G+ G Sbjct: 264 KKTG-KPMINLYTD--------KDTGKPKGEATVSFDDPPSAKAAIDWFDGKEFHGNIIK 314 Query: 185 -----------RGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216 RGGG GGG R G GG+RG GGF+GRG Sbjct: 315 VSFATRRPEFMRGGGSGGGRR-----GRGGYRG--RGGFQGRG 350 Score = 36.6 bits (83), Expect = 0.017 Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 3/45 (6%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGG--GGGGNFRGGGR 46 R GG GG GGG GG +RGG RGG GG GG ++R R Sbjct: 545 RSGGYGGDRSGGGYGG-DRGGGYGGDRGGYGGKMGGRNDYRNDQR 588 >gi|195972866 keratin 10 [Homo sapiens] Length = 584 Score = 60.5 bits (145), Expect = 1e-09 Identities = 33/63 (52%), Positives = 37/63 (58%), Gaps = 5/63 (7%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGR--GGFNKGQ 62 GGGRGG + GGG GG + GG S+ GGG GGG G GGG GG GGG GG+ G Sbjct: 461 GGGRGGGSFGGGYGGGSSGGGSS---GGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGS 517 Query: 63 DQG 65 G Sbjct: 518 SSG 520 Score = 59.3 bits (142), Expect = 2e-09 Identities = 31/62 (50%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGG-GNFRGGGRGGFGRGGGRGGFNKGQD 63 GGG GG + GG GGG + GGSS GGG GG G GG GG GGG GG+ G Sbjct: 488 GGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSS 547 Query: 64 QG 65 G Sbjct: 548 GG 549 Score = 58.5 bits (140), Expect = 4e-09 Identities = 30/63 (47%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Query: 5 GGGRGGFNRGGG--GGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQ 62 GGG GG + GGG GGG+ G SS G GG GG GGG GG+G G GG + G Sbjct: 496 GGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGG 555 Query: 63 DQG 65 G Sbjct: 556 GYG 558 Score = 57.8 bits (138), Expect = 7e-09 Identities = 32/60 (53%), Positives = 32/60 (53%), Gaps = 5/60 (8%) Query: 163 GEKGPPRGGGRGG--RGGGRGGGGRGGGRGGGFRGGRGGG---GGGFRGGRGGGFRGRGH 217 G G GGG GG GGG GGG GGG GG GG GGG GG GG GGG GH Sbjct: 463 GRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGH 522 Score = 57.0 bits (136), Expect = 1e-08 Identities = 27/55 (49%), Positives = 28/55 (50%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRGH 217 G G GG GG G GGG GG GGG+ GG GGG GG GGG GH Sbjct: 512 GYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGH 566 Score = 56.2 bits (134), Expect = 2e-08 Identities = 32/58 (55%), Positives = 33/58 (56%), Gaps = 4/58 (6%) Query: 163 GEKGPPRGGGRGG-RGGGRGGGGRGGG-RGGGFRGG--RGGGGGGFRGGRGGGFRGRG 216 G G GGG GG GGG GGG GGG GGG+ GG GG GG GG GGG G G Sbjct: 481 GSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGG 538 Score = 55.1 bits (131), Expect = 5e-08 Identities = 29/57 (50%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Query: 163 GEKGPPRGGGR--GGRGGGRGGGGRGGGRGGGFRGG-RGGGGGGFRGGRGGGFRGRG 216 G G GGG GG GGG GG GG GG+ GG GGGGGG+ GG GG G Sbjct: 498 GYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSG 554 Score = 55.1 bits (131), Expect = 5e-08 Identities = 28/56 (50%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGR---GGFGRGGGRGG 57 GGG GG + GG GG + GG GGGGGG GG GGG GG+G G GG Sbjct: 510 GGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGG 565 Score = 54.7 bits (130), Expect = 6e-08 Identities = 29/61 (47%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 2 SFRGGGRGGFNRGGGGGGFNRGGSSNHFRGG-GGGGGGGNFRGGGRGGFGRGGGRGGFNK 60 SF GG GG + GG GG + GG GG GGG GG GGG GG GG GG + Sbjct: 468 SFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSS 527 Query: 61 G 61 G Sbjct: 528 G 528 Score = 54.3 bits (129), Expect = 8e-08 Identities = 31/63 (49%), Positives = 34/63 (53%), Gaps = 4/63 (6%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGG-GGGGGGNFRGGGRGGFGRGGGRGGFNKGQ 62 RGGG G GG GGG + GGSS GGG GG GG + GG GG GGG GG + Sbjct: 464 RGGGSFG---GGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSG 520 Query: 63 DQG 65 G Sbjct: 521 GHG 523 Score = 54.3 bits (129), Expect = 8e-08 Identities = 26/49 (53%), Positives = 26/49 (53%) Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214 G GGG GG GG GGG GGG GG G G GGG GG GG G Sbjct: 480 GGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSG 528 Score = 53.9 bits (128), Expect = 1e-07 Identities = 28/44 (63%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Query: 174 GGRGGGRGGGGRGGGR-GGGFRGGRGGGGGGFRGGRGGGFRGRG 216 G GG GGG GGG GGG GG G GGGGF GG GGGF G G Sbjct: 96 GSYGGSFGGGSFGGGSFGGGSFGGGGFGGGGFGGGFGGGFGGDG 139 Score = 53.5 bits (127), Expect = 1e-07 Identities = 31/55 (56%), Positives = 32/55 (58%), Gaps = 5/55 (9%) Query: 166 GPPRGGGR--GGRGGG-RGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRGH 217 G RGGG GG GGG GGG GGG GGG G GGG GG G GGG G G+ Sbjct: 461 GGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGG--GSSGGGSSGGGY 513 Score = 53.5 bits (127), Expect = 1e-07 Identities = 30/68 (44%), Positives = 36/68 (52%), Gaps = 7/68 (10%) Query: 3 FRGGGRGGFNRGGG-GGGFNRGG----SSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGG 57 + GG GG + GGG GGG + GG SS + GG GGGGG + GG GG G GG Sbjct: 499 YGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSG--GG 556 Query: 58 FNKGQDQG 65 + G G Sbjct: 557 YGGGSSSG 564 Score = 52.0 bits (123), Expect = 4e-07 Identities = 29/63 (46%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGG--GGGGGGNFRGGGRGGFGRGGGRGGFNKGQ 62 GGG G GGG GG + GG GGG GGG GG GG GG GG GG + G Sbjct: 479 GGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGG 538 Query: 63 DQG 65 G Sbjct: 539 GGG 541 Score = 51.6 bits (122), Expect = 5e-07 Identities = 34/67 (50%), Positives = 37/67 (55%), Gaps = 10/67 (14%) Query: 5 GGGRGGFNR-GGGGGGFNRGG-SSNHFRG------GGGGGGGGNFRGG--GRGGFGRGGG 54 GG GG+ GG GGG RG S+ F G GGG GGG+F GG G GGFG GG Sbjct: 68 GGSSGGYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFGGGGF 127 Query: 55 RGGFNKG 61 GGF G Sbjct: 128 GGGFGGG 134 Score = 51.2 bits (121), Expect = 7e-07 Identities = 29/48 (60%), Positives = 29/48 (60%), Gaps = 3/48 (6%) Query: 172 GRGGRGGGRGGGGRGGGR-GGGFRGG--RGGGGGGFRGGRGGGFRGRG 216 G GGRGGG GGG GGG GGG GG GG GG GG GGG G G Sbjct: 460 GGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGG 507 Score = 50.4 bits (119), Expect = 1e-06 Identities = 27/45 (60%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Query: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214 G G G GGGRGGG GGG GGG GG G GGG GG GG G Sbjct: 455 GEGSSG-GGGRGGGSFGGGYGGGSSGG-GSSGGGHGGGHGGSSGG 497 Score = 49.3 bits (116), Expect = 3e-06 Identities = 25/49 (51%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214 G GG GG GG GG GGG GGG GG G GGG+ GG G G Sbjct: 476 GSSGGGSSGGGHGGGHGGSSGGGYGGGSSGG-GSSGGGYGGGSSSGGHG 523 Score = 49.3 bits (116), Expect = 3e-06 Identities = 28/55 (50%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Query: 163 GEKGPPRGGGRGGRGGG-RGGGGRGGGRGGGFRGG--RGGGGGGFRGGRGGGFRG 214 G G GG GG GG GGG GGG G GG GG GGG GG GGG+ G Sbjct: 490 GHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGG 544 Score = 48.5 bits (114), Expect = 4e-06 Identities = 28/53 (52%), Positives = 28/53 (52%), Gaps = 5/53 (9%) Query: 2 SFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGG 54 SF G G F G GGG GGS GGGG GGG F GG GGFG GG Sbjct: 93 SFGGSYGGSFGGGSFGGGSFGGGSF-----GGGGFGGGGFGGGFGGGFGGDGG 140 Score = 48.5 bits (114), Expect = 4e-06 Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 6/61 (9%) Query: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQG 65 GG GG + GGGGGG+ GGSS GGG GG + GG G + G + +G Sbjct: 528 GGYGGGSSGGGGGGYG-GGSS-----GGGSSSGGGYGGGSSSGGHKSSSSGSVGESSSKG 581 Query: 66 P 66 P Sbjct: 582 P 582 Score = 47.8 bits (112), Expect = 7e-06 Identities = 32/78 (41%), Positives = 36/78 (46%), Gaps = 17/78 (21%) Query: 5 GGGRGGFNRGGG-------------GGGFNRGGSS--NHFRGGGGGG--GGGNFRGGGRG 47 GGG GG GGG GGGF+ GG S + RG GGG GG + GG G Sbjct: 19 GGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSGGYGGLG 78 Query: 48 GFGRGGGRGGFNKGQDQG 65 GFG G RG + G Sbjct: 79 GFGGGSFRGSYGSSSFGG 96 Score = 47.4 bits (111), Expect = 1e-05 Identities = 29/64 (45%), Positives = 30/64 (46%), Gaps = 16/64 (25%) Query: 169 RGGGRGGRGGGRGGGG-------------RGGGRGGGFRGG---RGGGGGGFRGGRGGGF 212 R GG GG GG GGGG GG GGF GG RG GGG GG GG+ Sbjct: 15 RSGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSGGY 74 Query: 213 RGRG 216 G G Sbjct: 75 GGLG 78 Score = 46.6 bits (109), Expect = 2e-05 Identities = 24/52 (46%), Positives = 24/52 (46%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214 G G GG GG GG GGG GG GGG G G GGG GG G Sbjct: 521 GHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSG 572 Score = 45.8 bits (107), Expect = 3e-05 Identities = 28/64 (43%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 2 SFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRG-GGRGGFNK 60 SFRG G GG F G GGG GGGG GG GGFG G GG GG Sbjct: 84 SFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFGGGGFGGGFGGGFGGDGGLLS 143 Query: 61 GQDQ 64 G ++ Sbjct: 144 GNEK 147 Score = 45.1 bits (105), Expect = 5e-05 Identities = 33/75 (44%), Positives = 36/75 (48%), Gaps = 11/75 (14%) Query: 2 SFRGGGRGGFNRGGGGGGFN--RGGSSNHFRGGG---GGGGGGNFRGGGRGG------FG 50 S R GG GG GGGGG + R SS GGG GG GG+F G GG G Sbjct: 13 SSRSGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSG 72 Query: 51 RGGGRGGFNKGQDQG 65 GG GGF G +G Sbjct: 73 GYGGLGGFGGGSFRG 87 Score = 44.7 bits (104), Expect = 6e-05 Identities = 27/52 (51%), Positives = 27/52 (51%), Gaps = 4/52 (7%) Query: 15 GGGGGFNRGGSSNHFRGG-GGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQG 65 G GG RGG S F GG GGG GG GGG GG G GG GG G G Sbjct: 457 GSSGGGGRGGGS--FGGGYGGGSSGGGSSGGGHGG-GHGGSSGGGYGGGSSG 505 Score = 44.3 bits (103), Expect = 8e-05 Identities = 28/55 (50%), Positives = 28/55 (50%), Gaps = 9/55 (16%) Query: 171 GGRGGRGGGRGGGGRG-------GGRGGGFRGGRGGGGGGFRGGR--GGGFRGRG 216 GG GG GG GG RG GG GG GG GGG F GG GGGF G G Sbjct: 72 GGYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFGGGG 126 Score = 43.9 bits (102), Expect = 1e-04 Identities = 24/44 (54%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Query: 172 GRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGR-GGGFRG 214 G GG GG GG GGG GG GGGGF GG GGGF G Sbjct: 90 GSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFGGGGFGGGFGG 133 Score = 43.9 bits (102), Expect = 1e-04 Identities = 22/37 (59%), Positives = 22/37 (59%) Query: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRG 206 GGG G G GGG GGG GGGF GG GG GG G Sbjct: 108 GGGSFGGGSFGGGGFGGGGFGGGFGGGFGGDGGLLSG 144 Score = 42.4 bits (98), Expect = 3e-04 Identities = 22/44 (50%), Positives = 22/44 (50%) Query: 171 GGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214 GG GG GG G GGG GG GG GG G GG FRG Sbjct: 44 GGGFSSGGFSGGSFSRGSSGGGCFGGSSGGYGGLGGFGGGSFRG 87 Score = 42.4 bits (98), Expect = 3e-04 Identities = 26/46 (56%), Positives = 26/46 (56%), Gaps = 3/46 (6%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGR--GGGFRGGRGGGGGGFRG 206 G G GGG G GG GGG GGG GGGF GG GGG GG G Sbjct: 96 GSYGGSFGGGSFG-GGSFGGGSFGGGGFGGGGFGGGFGGGFGGDGG 140 Score = 38.9 bits (89), Expect = 0.003 Identities = 22/46 (47%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 170 GGGRGGR-GGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214 GG GG G GGG GG GG+ G G GGG FRG G G Sbjct: 50 GGFSGGSFSRGSSGGGCFGGSSGGYGGLGGFGGGSFRGSYGSSSFG 95 Score = 38.5 bits (88), Expect = 0.004 Identities = 31/64 (48%), Positives = 31/64 (48%), Gaps = 19/64 (29%) Query: 170 GGGRGGRGGGRG-------------GGG--RGGGRGGGF-RGGRGGG-GGGFRGGRG--G 210 GGG GG GGG G GGG GG GG F RG GGG GG GG G G Sbjct: 19 GGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSGGYGGLG 78 Query: 211 GFRG 214 GF G Sbjct: 79 GFGG 82 Score = 37.0 bits (84), Expect = 0.013 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Query: 3 FRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRG 56 + GG GG G GGG + GG S+ G GGG G + G G +G Sbjct: 530 YGGGSSGGGGGGYGGG--SSGGGSSSGGGYGGGSSSGGHKSSSSGSVGESSSKG 581 Score = 35.0 bits (79), Expect = 0.049 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 3/51 (5%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGR 55 GGG GG+ G GGG + GG + GG GG + G G G R Sbjct: 536 GGGGGGYGGGSSGGGSSSGGG---YGGGSSSGGHKSSSSGSVGESSSKGPR 583 Score = 34.7 bits (78), Expect = 0.064 Identities = 16/27 (59%), Positives = 16/27 (59%) Query: 190 GGGFRGGRGGGGGGFRGGRGGGFRGRG 216 G G GG G GGG F GG GGG G G Sbjct: 455 GEGSSGGGGRGGGSFGGGYGGGSSGGG 481 Score = 32.0 bits (71), Expect = 0.41 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 7/51 (13%) Query: 22 RGGSSNHFRGGGGGGGGGNFRGGGRGGF-------GRGGGRGGFNKGQDQG 65 R SS H+ GGGGG GG GG +G GGF+ G G Sbjct: 4 RYSSSKHYSSSRSGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSG 54 Score = 31.2 bits (69), Expect = 0.71 Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Query: 33 GGGGGGGNFRGGGRGGFGRGGG-RGGFNKGQDQG 65 G G GG RGGG G G GGG GG + G G Sbjct: 455 GEGSSGGGGRGGGSFGGGYGGGSSGGGSSGGGHG 488 >gi|47132620 keratin 2 [Homo sapiens] Length = 639 Score = 60.1 bits (144), Expect = 1e-09 Identities = 34/54 (62%), Positives = 34/54 (62%), Gaps = 2/54 (3%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216 G G GG GGRGGG GGG GG G GF GG G GGGGF GGR GGF G G Sbjct: 79 GGGGFGAAGGFGGRGGGFGGGSSFGG-GSGFSGG-GFGGGGFGGGRFGGFGGPG 130 Score = 59.7 bits (143), Expect = 2e-09 Identities = 37/77 (48%), Positives = 40/77 (51%), Gaps = 7/77 (9%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRG-GGRGGFGRGGGRGGFNKGQ 62 RGGG GG + GGG GF+ GG GGGG GGG F G GG GG G GG GGF G Sbjct: 92 RGGGFGGGSSFGGGSGFSGGGF------GGGGFGGGRFGGFGGPGGVGGLGGPGGFGPGG 145 Query: 63 DQGPPERVVLLGEFLHP 79 G V + L P Sbjct: 146 YPGGIHEVSVNQSLLQP 162 Score = 54.7 bits (130), Expect = 6e-08 Identities = 36/84 (42%), Positives = 37/84 (44%), Gaps = 26/84 (30%) Query: 1 MSFRGGGRGGFNRGG---------------------GGGGFNR----GGSSNHFRGGGGG 35 +S GGG GGF GG GGGGF GG F GG Sbjct: 43 LSRHGGGGGGFGGGGFGSRSLVGLGGTKSISISVAGGGGGFGAAGGFGGRGGGFGGGSSF 102 Query: 36 GGGGNFRGGGRGGFGRGGGR-GGF 58 GGG F GGG GG G GGGR GGF Sbjct: 103 GGGSGFSGGGFGGGGFGGGRFGGF 126 Score = 54.7 bits (130), Expect = 6e-08 Identities = 31/53 (58%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRG-GGFRGRGH 217 G GGG G GGG GGGG GGGR GGF G G GG G GG G GG+ G H Sbjct: 99 GSSFGGGSGFSGGGFGGGGFGGGRFGGFGGPGGVGGLGGPGGFGPGGYPGGIH 151 Score = 52.8 bits (125), Expect = 2e-07 Identities = 30/69 (43%), Positives = 34/69 (49%), Gaps = 7/69 (10%) Query: 4 RGGGRGGFNRGGG--GGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFG-----RGGGRG 56 + G RGG GG GGG+ GG S G GGG GG+ GGG G G GG RG Sbjct: 545 QSGSRGGSGGGGSISGGGYGSGGGSGGRYGSGGGSKGGSISGGGYGSGGGKHSSGGGSRG 604 Query: 57 GFNKGQDQG 65 G + G G Sbjct: 605 GSSSGGGYG 613 Score = 52.4 bits (124), Expect = 3e-07 Identities = 34/66 (51%), Positives = 34/66 (51%), Gaps = 6/66 (9%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGG----GGGGGGGNFRGGGRGGFGRGGGRGGFNK 60 GGG G GG GG GGSS F GG GGG GGG F GG GGFG GG GG Sbjct: 80 GGGFGAAGGFGGRGGGFGGGSS--FGGGSGFSGGGFGGGGFGGGRFGGFGGPGGVGGLGG 137 Query: 61 GQDQGP 66 GP Sbjct: 138 PGGFGP 143 Score = 50.4 bits (119), Expect = 1e-06 Identities = 30/66 (45%), Positives = 33/66 (50%), Gaps = 8/66 (12%) Query: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGG------GGGGGGGNFRGGGRGGFGRGGGRGGFN 59 GG GG RG GG GSS++ GG GG GGGG+ GGG G G GGR G Sbjct: 519 GGSGG--RGSSSGGGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGRYGSG 576 Query: 60 KGQDQG 65 G G Sbjct: 577 GGSKGG 582 Score = 48.5 bits (114), Expect = 4e-06 Identities = 31/69 (44%), Positives = 36/69 (52%), Gaps = 9/69 (13%) Query: 6 GGRGGFNRGG---GGGGFNRGGSSNHFRGGGGGGG----GGNFRGGGRGG-FGRGGG-RG 56 GGRG + GG G + GG + RGG GGGG GG GGG GG +G GGG +G Sbjct: 522 GGRGSSSGGGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGRYGSGGGSKG 581 Query: 57 GFNKGQDQG 65 G G G Sbjct: 582 GSISGGGYG 590 Score = 48.1 bits (113), Expect = 6e-06 Identities = 27/53 (50%), Positives = 30/53 (56%), Gaps = 3/53 (5%) Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGG--RGGGFRGRG 216 G + G RGG GGG G G G GGG GGR G GGG +GG GGG+ G Sbjct: 542 GGRQSGSRGGSGGGGSISGGGYGSGGG-SGGRYGSGGGSKGGSISGGGYGSGG 593 Score = 48.1 bits (113), Expect = 6e-06 Identities = 29/62 (46%), Positives = 32/62 (51%), Gaps = 8/62 (12%) Query: 160 RPPGEKGPPRGGGR---GGRGGGRGGGGR----GGGRGGGFRGGRGGGGGGFRGGRGGGF 212 R G +G GGG GG G G G GGR GG +GG GG G GGG + GGG Sbjct: 544 RQSGSRGGSGGGGSISGGGYGSGGGSGGRYGSGGGSKGGSISGGGYGSGGG-KHSSGGGS 602 Query: 213 RG 214 RG Sbjct: 603 RG 604 Score = 47.4 bits (111), Expect = 1e-05 Identities = 30/65 (46%), Positives = 32/65 (49%), Gaps = 8/65 (12%) Query: 5 GGGR---GGFNRGGGGGG-FNRGGSS--NHFRGGGGGGGGGNFR--GGGRGGFGRGGGRG 56 GGG GG+ GGG GG + GG S GGG G GGG GG RGG GGG G Sbjct: 554 GGGSISGGGYGSGGGSGGRYGSGGGSKGGSISGGGYGSGGGKHSSGGGSRGGSSSGGGYG 613 Query: 57 GFNKG 61 G Sbjct: 614 SGGGG 618 Score = 46.6 bits (109), Expect = 2e-05 Identities = 27/53 (50%), Positives = 30/53 (56%), Gaps = 8/53 (15%) Query: 170 GGGRGGR----GGGRGGGGRGGGRGGGFRGGRGGGGGGFRGG--RGGGFRGRG 216 GGG GGR GG +GG GGG G G GG+ GGG RGG GGG+ G Sbjct: 566 GGGSGGRYGSGGGSKGGSISGGGYGSG--GGKHSSGGGSRGGSSSGGGYGSGG 616 Score = 46.2 bits (108), Expect = 2e-05 Identities = 24/53 (45%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Query: 163 GEKGPPRGGGRGGRGGGR---GGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGF 212 G KG GG G GGG+ GGG RGG GG G GGG +G G F Sbjct: 578 GSKGGSISGGGYGSGGGKHSSGGGSRGGSSSGGGYGSGGGGSSSVKGSSGEAF 630 Score = 45.1 bits (105), Expect = 5e-05 Identities = 28/56 (50%), Positives = 29/56 (51%), Gaps = 13/56 (23%) Query: 171 GGRGGRGGGRGGGGRGG-------GRGGGFRGGRGGGG----GGFRGGRGGGFRGR 215 GG GGRG GGG G GR G RGG GGGG GG+ G GGG GR Sbjct: 519 GGSGGRGSSSGGGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGY--GSGGGSGGR 572 Score = 43.9 bits (102), Expect = 1e-04 Identities = 34/86 (39%), Positives = 34/86 (39%), Gaps = 30/86 (34%) Query: 4 RGGGRGGFNRGGGGGGFNRGGS----------SNHFRGGGGGG-GGGNFR---------- 42 RGGG GGF G GGS S H GGGGGG GGG F Sbjct: 12 RGGGGGGFRGFSSGSAVVSGGSRRSTSSFSCLSRH--GGGGGGFGGGGFGSRSLVGLGGT 69 Query: 43 -------GGGRGGFGRGGGRGGFNKG 61 GG GGFG GG GG G Sbjct: 70 KSISISVAGGGGGFGAAGGFGGRGGG 95 Score = 43.5 bits (101), Expect = 1e-04 Identities = 30/55 (54%), Positives = 31/55 (56%), Gaps = 6/55 (10%) Query: 169 RGGGRGGR---GGGRG--GGGRGGGRGGGFRGGRGGGGGGFRG-GRGGGFRGRGH 217 RGGG GG GGG G GGG GGG GG R G GG GG G G GGF G+ Sbjct: 92 RGGGFGGGSSFGGGSGFSGGGFGGGGFGGGRFGGFGGPGGVGGLGGPGGFGPGGY 146 Score = 43.5 bits (101), Expect = 1e-04 Identities = 24/52 (46%), Positives = 25/52 (48%), Gaps = 5/52 (9%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGG-----RGGGFRGGRGGGGGGFRGGRG 209 G G G G G +GG GGG G G GGG RGG GGG GG G Sbjct: 567 GGSGGRYGSGGGSKGGSISGGGYGSGGGKHSSGGGSRGGSSSGGGYGSGGGG 618 Score = 43.1 bits (100), Expect = 2e-04 Identities = 29/63 (46%), Positives = 32/63 (50%), Gaps = 14/63 (22%) Query: 163 GEKGPPRGGG---------RGGRGGGRGGGGRGGGR--GGGFRGGRGGGGGGFRGGRGGG 211 G +G GGG GGR G GG GGG GGG+ G GGG GG R G GGG Sbjct: 522 GGRGSSSGGGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGY--GSGGGSGG-RYGSGGG 578 Query: 212 FRG 214 +G Sbjct: 579 SKG 581 Score = 42.4 bits (98), Expect = 3e-04 Identities = 28/58 (48%), Positives = 30/58 (51%), Gaps = 13/58 (22%) Query: 3 FRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK 60 F GGG GG GG GGG R GG GG GG GG GGFG GG GG ++ Sbjct: 108 FSGGGFGG---GGFGGG----------RFGGFGGPGGVGGLGGPGGFGPGGYPGGIHE 152 Score = 39.3 bits (90), Expect = 0.003 Identities = 26/54 (48%), Positives = 26/54 (48%), Gaps = 15/54 (27%) Query: 176 RGGGRGGGGRGGGRGGGFRGGRG----------GGGGGFR-----GGRGGGFRG 214 R GG GGG GGG G G G GGGGGF GGRGGGF G Sbjct: 45 RHGGGGGGFGGGGFGSRSLVGLGGTKSISISVAGGGGGFGAAGGFGGRGGGFGG 98 Score = 39.3 bits (90), Expect = 0.003 Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 9/55 (16%) Query: 5 GGGRGGFNRGGG---------GGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFG 50 GG +GG GGG GG +RGGSS+ G GGGG + +G FG Sbjct: 577 GGSKGGSISGGGYGSGGGKHSSGGGSRGGSSSGGGYGSGGGGSSSVKGSSGEAFG 631 Score = 33.5 bits (75), Expect = 0.14 Identities = 22/50 (44%), Positives = 22/50 (44%), Gaps = 15/50 (30%) Query: 175 GRGGGRGGGGRGGGRGGGFRGG--------------RGGGGGGFRGGRGG 210 GRGGG GGG RG G G GGGGGGF GG G Sbjct: 11 GRGGG-GGGFRGFSSGSAVVSGGSRRSTSSFSCLSRHGGGGGGFGGGGFG 59 Score = 30.4 bits (67), Expect = 1.2 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 4/48 (8%) Query: 170 GGGR----GGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFR 213 GGG+ GG GG GG G GGG +G G F FR Sbjct: 592 GGGKHSSGGGSRGGSSSGGGYGSGGGGSSSVKGSSGEAFGSSVTFSFR 639 Score = 29.6 bits (65), Expect = 2.1 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGN 40 GG RGG + GGG G + GG S+ +G G G + Sbjct: 600 GGSRGGSSSGGGYG--SGGGGSSSVKGSSGEAFGSS 633 Score = 27.7 bits (60), Expect = 7.8 Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 17/46 (36%) Query: 33 GGGGGGGNFRGGGRG-----GFGR------------GGGRGGFNKG 61 G GGGGG FRG G G R GGG GGF G Sbjct: 11 GRGGGGGGFRGFSSGSAVVSGGSRRSTSSFSCLSRHGGGGGGFGGG 56 >gi|100913206 DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Homo sapiens] Length = 1270 Score = 59.3 bits (142), Expect = 2e-09 Identities = 34/76 (44%), Positives = 39/76 (51%), Gaps = 12/76 (15%) Query: 2 SFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF-GRGG------- 53 S+ GGG GG GG G GGS+N FR G G G GG +RG RGGF G G Sbjct: 1179 SYSGGGYGGGYSSGGYGSGGYGGSANSFRAGYGAGVGGGYRGVSRGGFRGNSGGDYRGPS 1238 Query: 54 ----GRGGFNKGQDQG 65 G GGF +G +G Sbjct: 1239 GGYRGSGGFQRGGGRG 1254 Score = 51.2 bits (121), Expect = 7e-07 Identities = 34/64 (53%), Positives = 36/64 (56%), Gaps = 9/64 (14%) Query: 2 SFRGG---GRGGFNRGGGGGGFNRGGSSNHFRGGGGG--GGGGNFRGGGRGGFGR---GG 53 SFR G G GG RG GGF RG S +RG GG G GG RGGGRG +G G Sbjct: 1205 SFRAGYGAGVGGGYRGVSRGGF-RGNSGGDYRGPSGGYRGSGGFQRGGGRGAYGTGYFGQ 1263 Query: 54 GRGG 57 GRGG Sbjct: 1264 GRGG 1267 Score = 48.1 bits (113), Expect = 6e-06 Identities = 29/59 (49%), Positives = 33/59 (55%), Gaps = 11/59 (18%) Query: 8 RGGFNRGGGGG--GFNRGGSSNHFRGGGGG---GGGGNFRGGGRGGFGRGGGRGGFNKG 61 R G+ G GGG G +RGG FRG GG G G +RG GGF RGGGRG + G Sbjct: 1207 RAGYGAGVGGGYRGVSRGG----FRGNSGGDYRGPSGGYRGS--GGFQRGGGRGAYGTG 1259 Score = 47.4 bits (111), Expect = 1e-05 Identities = 35/78 (44%), Positives = 36/78 (46%), Gaps = 22/78 (28%) Query: 159 PRPP------GEKGPPRGGGR---GGRGGGRGGGGRGGGRGGG----FRGGRG---GGG- 201 PRPP G RGG GG GGG GG G G GG FR G G GGG Sbjct: 1159 PRPPKMARYDNGSGYRRGGSSYSGGGYGGGYSSGGYGSGGYGGSANSFRAGYGAGVGGGY 1218 Query: 202 -----GGFRGGRGGGFRG 214 GGFRG GG +RG Sbjct: 1219 RGVSRGGFRGNSGGDYRG 1236 Score = 42.7 bits (99), Expect = 2e-04 Identities = 27/64 (42%), Positives = 30/64 (46%), Gaps = 9/64 (14%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRG-------GGRGGGFRGGRGG--GGGGFRGGRGGGFR 213 G G R G G G GGG RG G GG +RG GG G GGF+ G G G Sbjct: 1197 GGYGGSANSFRAGYGAGVGGGYRGVSRGGFRGNSGGDYRGPSGGYRGSGGFQRGGGRGAY 1256 Query: 214 GRGH 217 G G+ Sbjct: 1257 GTGY 1260 Score = 42.7 bits (99), Expect = 2e-04 Identities = 29/53 (54%), Positives = 32/53 (60%), Gaps = 5/53 (9%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRG-GGFR--GGRGGGGGGFRG-GRGGG 211 G +G RGG RG GG G GG RG GGF+ GGRG G G+ G GRGGG Sbjct: 1217 GYRGVSRGGFRGNSGGDYRGPS-GGYRGSGGFQRGGGRGAYGTGYFGQGRGGG 1268 Score = 41.6 bits (96), Expect = 5e-04 Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216 G G RG RGG G GG RG GG+RG G GG RG G G+ G+G Sbjct: 1213 GVGGGYRGVSRGGFRGNSGGDYRGPS--GGYRGSGGFQRGGGRGAYGTGYFGQG 1264 Score = 40.8 bits (94), Expect = 9e-04 Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 5/53 (9%) Query: 13 RGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQG 65 R G G+ RGGSS GGG GG + GG G G GG F G G Sbjct: 1166 RYDNGSGYRRGGSSY-----SGGGYGGGYSSGGYGSGGYGGSANSFRAGYGAG 1213 Score = 40.8 bits (94), Expect = 9e-04 Identities = 25/45 (55%), Positives = 26/45 (57%), Gaps = 6/45 (13%) Query: 163 GEKGPPRGGGRGGRGGGRGGGG--RGGGRG----GGFRGGRGGGG 201 G +G G RG GG RG GG RGGGRG G F GRGGGG Sbjct: 1225 GFRGNSGGDYRGPSGGYRGSGGFQRGGGRGAYGTGYFGQGRGGGG 1269 Score = 40.0 bits (92), Expect = 0.002 Identities = 29/70 (41%), Positives = 35/70 (50%), Gaps = 17/70 (24%) Query: 10 GFNRGGG---GGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGG-------RGGF- 58 G+ RGG GGG+ G SS + GG GG +FR G +G G G RGGF Sbjct: 1172 GYRRGGSSYSGGGYGGGYSSGGYGSGGYGGSANSFRAG----YGAGVGGGYRGVSRGGFR 1227 Query: 59 -NKGQD-QGP 66 N G D +GP Sbjct: 1228 GNSGGDYRGP 1237 >gi|55956899 keratin 9 [Homo sapiens] Length = 623 Score = 58.5 bits (140), Expect = 4e-09 Identities = 32/57 (56%), Positives = 33/57 (57%), Gaps = 5/57 (8%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGG--GFRGGRG---GGGGGFRGGRGGGFRG 214 G G G RGG GG GGGG GGG GG G RGG G GGG G GG GGG+ G Sbjct: 480 GSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGG 536 Score = 58.5 bits (140), Expect = 4e-09 Identities = 33/61 (54%), Positives = 35/61 (57%), Gaps = 9/61 (14%) Query: 163 GEKGPPRGGG---RGGRGGGRGGG-GRGGGRGGGFRGGRGGG-----GGGFRGGRGGGFR 213 G G GGG RGG GG GGG G GGG GGG+ GG GGG GGG GG GG + Sbjct: 500 GGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYG 559 Query: 214 G 214 G Sbjct: 560 G 560 Score = 58.5 bits (140), Expect = 4e-09 Identities = 29/52 (55%), Positives = 30/52 (57%), Gaps = 3/52 (5%) Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRG---GGGGGFRGGRGGGFRG 214 G GGG GG GG GGG GG GGG GG G GGG G GG GGG+ G Sbjct: 523 GSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGG 574 Score = 58.2 bits (139), Expect = 5e-09 Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 2/63 (3%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGG--GGGGGNFRGGGRGGFGRGGGRGGFNKGQ 62 GG G +RGG GG + GGS + GG G GG GG++ GG G G GGG GG + G Sbjct: 482 GGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGG 541 Query: 63 DQG 65 G Sbjct: 542 HSG 544 Score = 57.8 bits (138), Expect = 7e-09 Identities = 32/61 (52%), Positives = 33/61 (54%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQ 64 GGG GG +RG GG SS F GG GGG GG F GG GFG GG GG G D Sbjct: 87 GGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGFGGFGGGAGGGDG 146 Query: 65 G 65 G Sbjct: 147 G 147 Score = 57.8 bits (138), Expect = 7e-09 Identities = 32/68 (47%), Positives = 37/68 (54%), Gaps = 7/68 (10%) Query: 4 RGGGRGGFNRGGGGGGF-----NRGGSSNHFRGG-GGGGGGGNFRGGGRGGFGRGGGRGG 57 RGG G + GG GGG+ +RGGS + GG G GGG G GGG GG G GG GG Sbjct: 490 RGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGG-GHSGGSGG 548 Query: 58 FNKGQDQG 65 + G G Sbjct: 549 GHSGGSGG 556 Score = 57.0 bits (136), Expect = 1e-08 Identities = 28/56 (50%), Positives = 31/56 (55%) Query: 2 SFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGG 57 S+ GG G GGG GG + GG S GG GG GGN+ GG G G GGG GG Sbjct: 519 SYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGG 574 Score = 57.0 bits (136), Expect = 1e-08 Identities = 27/57 (47%), Positives = 30/57 (52%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61 GGG GG + GG GGG + G N+ G G GGG G GGG G G GG G G Sbjct: 535 GGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGGGSG 591 Score = 56.2 bits (134), Expect = 2e-08 Identities = 28/52 (53%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRG 56 GGG GG GG GGG + G H G GG GGG+ GGG GG G GGG G Sbjct: 527 GGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGG-GYGGGSG 577 Score = 55.5 bits (132), Expect = 4e-08 Identities = 32/59 (54%), Positives = 32/59 (54%), Gaps = 7/59 (11%) Query: 163 GEKGPPRGGGRGGR------GGGRGGGGRG-GGRGGGFRGGRGGGGGGFRGGRGGGFRG 214 G G GGG GG GGG GGG RG GG GG GG GGGF GG GGGF G Sbjct: 67 GSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGG 125 Score = 55.5 bits (132), Expect = 4e-08 Identities = 31/55 (56%), Positives = 32/55 (58%), Gaps = 4/55 (7%) Query: 163 GEKGPPRGGGRGGRGGGRGGG-GRGGGRGGGFRGGRG--GGGGGFRGGRGGGFRG 214 G G GG GG GG GGG G GGG GGG+ GG G GG GG GG G GF G Sbjct: 541 GHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGG-GSGFGG 594 Score = 55.1 bits (131), Expect = 5e-08 Identities = 29/47 (61%), Positives = 30/47 (63%), Gaps = 3/47 (6%) Query: 171 GGRGGRGG--GRGG-GGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214 GGRGG GG GRG GG GG GGG GG GGG G RGG GG + G Sbjct: 476 GGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGG 522 Score = 54.7 bits (130), Expect = 6e-08 Identities = 28/55 (50%), Positives = 29/55 (52%), Gaps = 9/55 (16%) Query: 169 RGGGRGGRGGGRGGGGRGGGRG---------GGFRGGRGGGGGGFRGGRGGGFRG 214 RGG G GGG GGG GGG G GG G GG GGG+ GG GGG G Sbjct: 490 RGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSG 544 Score = 54.7 bits (130), Expect = 6e-08 Identities = 29/70 (41%), Positives = 33/70 (47%), Gaps = 6/70 (8%) Query: 2 SFRGGGRGGF------NRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGR 55 S+ GGG GG +RGG GG + G S GGG GGG G GG GG GG Sbjct: 496 SYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSG 555 Query: 56 GGFNKGQDQG 65 G + G G Sbjct: 556 GNYGGGSGSG 565 Score = 54.3 bits (129), Expect = 8e-08 Identities = 30/53 (56%), Positives = 30/53 (56%), Gaps = 6/53 (11%) Query: 170 GGGRGGRGGGRGGG---GRGGGRGGGFRGGRGGG---GGGFRGGRGGGFRGRG 216 GG GG GGG GGG G GGG GG G GGG GGG GG GGG RG Sbjct: 528 GGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRG 580 Score = 53.9 bits (128), Expect = 1e-07 Identities = 38/80 (47%), Positives = 41/80 (51%), Gaps = 19/80 (23%) Query: 5 GGGRGGFNRGGG-GGGFNR-------GGSSNHFRG--GGG----GGGGGNFRGGGRGGFG 50 GGG G++ GGG GGGF+ GG S F G GGG GG GG F GG GGFG Sbjct: 65 GGGSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFG 124 Query: 51 RG-----GGRGGFNKGQDQG 65 G GG GGF G G Sbjct: 125 GGYGSGFGGFGGFGGGAGGG 144 Score = 53.1 bits (126), Expect = 2e-07 Identities = 31/57 (54%), Positives = 31/57 (54%), Gaps = 12/57 (21%) Query: 170 GGGRGGRGGGRGGG---------GRGGGRGGGFRGGRG---GGGGGFRGGRGGGFRG 214 GGG G GG GGG G GGG GGGF GG G GG GGF GG GGG G Sbjct: 91 GGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGFGGFGGGAGGGDGG 147 Score = 53.1 bits (126), Expect = 2e-07 Identities = 29/59 (49%), Positives = 33/59 (55%), Gaps = 5/59 (8%) Query: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGG---GGNFRGGGRGGFGRGGGRGGFNKG 61 GGRGG GG G +RGGS + GGG GGG G RGG G +G G G GG + G Sbjct: 476 GGRGG--SGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGG 532 Score = 53.1 bits (126), Expect = 2e-07 Identities = 25/58 (43%), Positives = 29/58 (50%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61 RGG G + G G GG + GG GG GG GG GG G +G G G GG + G Sbjct: 513 RGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGG 570 Score = 52.8 bits (125), Expect = 2e-07 Identities = 28/56 (50%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Query: 163 GEKGPPRGGGRGGRGGGRGG--GGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216 G G GGG G GG GG GG GGG GG GG GG GG GG G G G Sbjct: 514 GGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSG 569 Score = 52.8 bits (125), Expect = 2e-07 Identities = 28/61 (45%), Positives = 29/61 (47%), Gaps = 9/61 (14%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGG---------GFRGGRGGGFR 213 G G GGG GG G GGG GG GG + GG G GGG G RGG GG Sbjct: 528 GGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHG 587 Query: 214 G 214 G Sbjct: 588 G 588 Score = 52.4 bits (124), Expect = 3e-07 Identities = 31/66 (46%), Positives = 34/66 (51%), Gaps = 3/66 (4%) Query: 2 SFRGGGRGGFNRG--GGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFN 59 S+ G RGG GGG G GG S G GG GGG+ GGG GG G GGG GG + Sbjct: 484 SYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGG-GYGGGSGGGH 542 Query: 60 KGQDQG 65 G G Sbjct: 543 SGGSGG 548 Score = 52.4 bits (124), Expect = 3e-07 Identities = 29/60 (48%), Positives = 34/60 (56%), Gaps = 5/60 (8%) Query: 5 GGGRGGFNRG---GGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61 GGG GG + G GG GG + GGS ++ GG G GGG GG GG G GG GG + G Sbjct: 531 GGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSG--GGYGGGSGSRGGSGGSHGG 588 Score = 52.4 bits (124), Expect = 3e-07 Identities = 31/58 (53%), Positives = 32/58 (55%), Gaps = 6/58 (10%) Query: 163 GEKGPPRGGGRGGRGGGRG-GGGRGGGRGG--GFRGGRG---GGGGGFRGGRGGGFRG 214 G G GG G GGG G GGG GGG GG G RGG G GGG GF G GG + G Sbjct: 545 GSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGG 602 Score = 50.1 bits (118), Expect = 1e-06 Identities = 27/45 (60%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGG 210 G GG GG GG GGG GGG G GF GG GG GGG GG GG Sbjct: 104 GYSSSGGFGGGFGGGSGGGFGGGYGSGF-GGFGGFGGGAGGGDGG 147 Score = 49.7 bits (117), Expect = 2e-06 Identities = 33/70 (47%), Positives = 34/70 (48%), Gaps = 23/70 (32%) Query: 170 GGGRGGR--------GG-----GRGGGGR-----GGGRGGGFR-----GGRGGGGGGFRG 206 GGG GGR GG GRGGGG GGG GGGF GG GGG GF G Sbjct: 40 GGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGG 99 Query: 207 GRGGGFRGRG 216 GGG+ G Sbjct: 100 ASGGGYSSSG 109 Score = 49.7 bits (117), Expect = 2e-06 Identities = 28/59 (47%), Positives = 28/59 (47%), Gaps = 5/59 (8%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGG-----GRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216 G G GG GG GG GGG GG G G G GG GGG GG G RGG G Sbjct: 529 GSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHG 587 Score = 49.7 bits (117), Expect = 2e-06 Identities = 29/56 (51%), Positives = 33/56 (58%), Gaps = 4/56 (7%) Query: 5 GGGRGGFNRGG-GGGGFNRGGSSNHFRGGGGGGG--GGNFRGGGRGGFGRGGGRGG 57 G G GG + GG GGG +RGGS GG G GG GG++ GGG G GGG GG Sbjct: 561 GSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSY-GGGEEASGSGGGYGG 615 Score = 49.3 bits (116), Expect = 3e-06 Identities = 26/51 (50%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGG--GGGGFRGGRGGGFRG 214 G GGG GG G RGG G G G GF G GG GGG G GGG+ G Sbjct: 565 GGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGG 615 Score = 47.8 bits (112), Expect = 7e-06 Identities = 33/74 (44%), Positives = 36/74 (48%), Gaps = 17/74 (22%) Query: 5 GGGRGGFNRGGG-GGGFNR------GGSSNHFRGGGGGGG------GGNFRGGGRGGFGR 51 GGG G F+ G GGG +R GGS + GGG GGG GG F GG RG G Sbjct: 41 GGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGGA 100 Query: 52 GGG----RGGFNKG 61 GG GGF G Sbjct: 101 SGGGYSSSGGFGGG 114 Score = 46.6 bits (109), Expect = 2e-05 Identities = 34/86 (39%), Positives = 41/86 (47%), Gaps = 25/86 (29%) Query: 1 MSFRGGGRGG--------------FNRGGGGGGFNRGGSSNHFRGGG----GGGGGGNFR 42 +S GGG GG F+ GGGGG R SS+ + GG G GGGG+F Sbjct: 11 LSRSGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFG 70 Query: 43 ----GGGRGGFGR---GGGRGGFNKG 61 GG GGF GGG GG ++G Sbjct: 71 YSYGGGSGGGFSASSLGGGFGGGSRG 96 Score = 46.6 bits (109), Expect = 2e-05 Identities = 27/49 (55%), Positives = 28/49 (57%), Gaps = 5/49 (10%) Query: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGG--GGGGFRGGRGGGFRGRG 216 G G+ G GG GG GG G G RGG GG GGGG GG GGG RG Sbjct: 469 GAGKIGLGGR---GGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRG 514 Score = 42.4 bits (98), Expect = 3e-04 Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Query: 6 GGRGGFNRGGGG--GGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRG 56 GG+ F G G G RGGS + G GG GG++ GGG G G GGG G Sbjct: 460 GGQEDFESSGAGKIGLGGRGGSGGSYGRGSRGGSGGSYGGGG-SGGGYGGGSG 511 Score = 41.2 bits (95), Expect = 7e-04 Identities = 22/42 (52%), Positives = 23/42 (54%), Gaps = 3/42 (7%) Query: 169 RGGGRGGRGGGRGGGGR-GGGRGGGFRGGRGGGGGGFRGGRG 209 RGG G GGG G GG GG GGG G GGG+ GG G Sbjct: 579 RGGSGGSHGGGSGFGGESGGSYGGGEEA--SGSGGGYGGGSG 618 Score = 40.4 bits (93), Expect = 0.001 Identities = 29/66 (43%), Positives = 30/66 (45%), Gaps = 23/66 (34%) Query: 170 GGGRGGRGGG-----------RGGGGRGGGR-------GGGFRG--GRGGGGG---GFRG 206 GGG GG G G GGG GGGR GGG GRGGGG + G Sbjct: 16 GGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGG 75 Query: 207 GRGGGF 212 G GGGF Sbjct: 76 GSGGGF 81 Score = 40.0 bits (92), Expect = 0.002 Identities = 26/54 (48%), Positives = 26/54 (48%), Gaps = 11/54 (20%) Query: 169 RGGGRGGRGGGRGGGGR----------GGGRGGGFRGGRGGGGGGFR-GGRGGG 211 R GG GG G G GG R GGG GG F G GGG R GRGGG Sbjct: 13 RSGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGG 66 Score = 35.8 bits (81), Expect = 0.029 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 5/51 (9%) Query: 15 GGGGGFNRGGSSNHFRGGGGGGGGGNF----RGGGRGGFGRGGGRGGFNKG 61 GG F G+ GG GG GG++ RGG G +G GG GG+ G Sbjct: 460 GGQEDFESSGAGK-IGLGGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGG 509 Score = 35.4 bits (80), Expect = 0.038 Identities = 21/41 (51%), Positives = 21/41 (51%), Gaps = 6/41 (14%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGG 203 G G GGG G GG G G G GGF GG GGG GG Sbjct: 113 GGFGGGSGGGFG------GGYGSGFGGFGGFGGGAGGGDGG 147 Score = 31.2 bits (69), Expect = 0.71 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 25 SSNHFRGGGGGGGGGNFRGGGRGGFGR------GGGRGGFNKGQDQG 65 SS R GGGGGGG G R + R GGG G F+ G Sbjct: 8 SSYLSRSGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYG 54 Score = 30.0 bits (66), Expect = 1.6 Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 7/42 (16%) Query: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGG----GGGGGGGNFRG 43 GG GG + GG G G GGS + GG G GGG G G Sbjct: 580 GGSGGSHGGGSGFGGESGGS---YGGGEEASGSGGGYGGGSG 618 Score = 28.1 bits (61), Expect = 6.0 Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 12/41 (29%) Query: 186 GGGRGGGFRGG------------RGGGGGGFRGGRGGGFRG 214 GGG GGG G GGGGGG R G+ G Sbjct: 15 GGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGG 55 Score = 27.7 bits (60), Expect = 7.8 Identities = 19/37 (51%), Positives = 19/37 (51%), Gaps = 7/37 (18%) Query: 5 GGGRG-GFNRGGG-GGGFNRGGSSNHFRGGGGGGGGG 39 GGG G G GG GGG GS GGG GGG G Sbjct: 587 GGGSGFGGESGGSYGGGEEASGS-----GGGYGGGSG 618 >gi|131412228 keratin 13 isoform b [Homo sapiens] Length = 420 Score = 57.4 bits (137), Expect = 9e-09 Identities = 30/49 (61%), Positives = 31/49 (63%), Gaps = 4/49 (8%) Query: 170 GGGRGGRGGGRG---GGGRGGGRGGGFRGGRGGG-GGGFRGGRGGGFRG 214 GG GG GGG GGG G G GGG+ GG GGG GGG GG GGGF G Sbjct: 39 GGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGGGFGGGFAG 87 Score = 56.6 bits (135), Expect = 2e-08 Identities = 33/60 (55%), Positives = 34/60 (56%), Gaps = 15/60 (25%) Query: 170 GGGRG-----------GRGGGRGGG---GRGGGRGGGFRGGRGGG-GGGFRGGRGGGFRG 214 GGGRG G GG GGG G GGG G GF GG GGG GGG+ GG GGGF G Sbjct: 24 GGGRGVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGGGFGG 83 Score = 50.1 bits (118), Expect = 1e-06 Identities = 32/67 (47%), Positives = 37/67 (55%), Gaps = 14/67 (20%) Query: 5 GGGRG----------GFNRGGGGGGFN---RGGSSNHFRGGGGGGGGGNFRGGGRGGFGR 51 GGGRG G + GG GGG + GG+ + F GG GGG GG + GG GGFG Sbjct: 24 GGGRGVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGGGFG- 82 Query: 52 GGGRGGF 58 GG GGF Sbjct: 83 GGFAGGF 89 Score = 47.8 bits (112), Expect = 7e-06 Identities = 28/59 (47%), Positives = 30/59 (50%), Gaps = 14/59 (23%) Query: 170 GGGRGGRGGGRG-------------GGGRGGGRGGGFRGGRGGG-GGGFRGGRGGGFRG 214 GGG GGGRG GG GGG GF GG G G GGG+ GG GGG+ G Sbjct: 17 GGGSCQLGGGRGVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGG 75 Score = 44.3 bits (103), Expect = 8e-05 Identities = 25/49 (51%), Positives = 25/49 (51%) Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214 G G G GG GG GGG GGG GGGF GG GG F GG G Sbjct: 54 GGGAGSGFGGGYGGGLGGGYGGGLGGGFGGGFAGGFVDFGACDGGLLTG 102 Score = 43.5 bits (101), Expect = 1e-04 Identities = 28/60 (46%), Positives = 30/60 (50%), Gaps = 16/60 (26%) Query: 170 GGGRGGRGGGRGGGGRG----------GGRGGGFRGG-----RGGGGGGFRGGRGGGFRG 214 GGG GG G + GGGRG GG GG+ GG GG G GF GG GGG G Sbjct: 13 GGGFGG-GSCQLGGGRGVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGG 71 Score = 42.4 bits (98), Expect = 3e-04 Identities = 21/34 (61%), Positives = 21/34 (61%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGG 196 G G GGG GG GG GGG GGG GGGF GG Sbjct: 55 GGAGSGFGGGYGGGLGGGYGGGLGGGFGGGFAGG 88 Score = 42.0 bits (97), Expect = 4e-04 Identities = 28/68 (41%), Positives = 31/68 (45%), Gaps = 9/68 (13%) Query: 5 GGGRGGFNRG-------GGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF-GRGGGRG 56 GG GG+ G G G GF GG GG GGG GG F GG GGF G G Sbjct: 39 GGSAGGYGGGVSCGFGGGAGSGFG-GGYGGGLGGGYGGGLGGGFGGGFAGGFVDFGACDG 97 Query: 57 GFNKGQDQ 64 G G ++ Sbjct: 98 GLLTGNEK 105 Score = 38.5 bits (88), Expect = 0.004 Identities = 25/57 (43%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 2 SFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRG-GGRGGFGRGGGRGG 57 S+ GG GG + GGG G + + G GG GGG G GG G G GGG GG Sbjct: 11 SYGGGFGGGSCQLGGGRGVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGG 67 Score = 29.3 bits (64), Expect = 2.7 Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 7/47 (14%) Query: 25 SSNHFRGGGGGGGGGNFRGGGRG------GFGRGGGRGGFNKGQDQG 65 SS+ GGG GGG GGGRG F GG GG+ G G Sbjct: 7 SSSASYGGGFGGGSCQL-GGGRGVSTCSTRFVSGGSAGGYGGGVSCG 52 >gi|131412225 keratin 13 isoform a [Homo sapiens] Length = 458 Score = 57.4 bits (137), Expect = 9e-09 Identities = 30/49 (61%), Positives = 31/49 (63%), Gaps = 4/49 (8%) Query: 170 GGGRGGRGGGRG---GGGRGGGRGGGFRGGRGGG-GGGFRGGRGGGFRG 214 GG GG GGG GGG G G GGG+ GG GGG GGG GG GGGF G Sbjct: 39 GGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGGGFGGGFAG 87 Score = 56.6 bits (135), Expect = 2e-08 Identities = 33/60 (55%), Positives = 34/60 (56%), Gaps = 15/60 (25%) Query: 170 GGGRG-----------GRGGGRGGG---GRGGGRGGGFRGGRGGG-GGGFRGGRGGGFRG 214 GGGRG G GG GGG G GGG G GF GG GGG GGG+ GG GGGF G Sbjct: 24 GGGRGVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGGGFGG 83 Score = 50.1 bits (118), Expect = 1e-06 Identities = 32/67 (47%), Positives = 37/67 (55%), Gaps = 14/67 (20%) Query: 5 GGGRG----------GFNRGGGGGGFN---RGGSSNHFRGGGGGGGGGNFRGGGRGGFGR 51 GGGRG G + GG GGG + GG+ + F GG GGG GG + GG GGFG Sbjct: 24 GGGRGVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGGGFG- 82 Query: 52 GGGRGGF 58 GG GGF Sbjct: 83 GGFAGGF 89 Score = 47.8 bits (112), Expect = 7e-06 Identities = 28/59 (47%), Positives = 30/59 (50%), Gaps = 14/59 (23%) Query: 170 GGGRGGRGGGRG-------------GGGRGGGRGGGFRGGRGGG-GGGFRGGRGGGFRG 214 GGG GGGRG GG GGG GF GG G G GGG+ GG GGG+ G Sbjct: 17 GGGSCQLGGGRGVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGG 75 Score = 44.3 bits (103), Expect = 8e-05 Identities = 25/49 (51%), Positives = 25/49 (51%) Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214 G G G GG GG GGG GGG GGGF GG GG F GG G Sbjct: 54 GGGAGSGFGGGYGGGLGGGYGGGLGGGFGGGFAGGFVDFGACDGGLLTG 102 Score = 43.5 bits (101), Expect = 1e-04 Identities = 28/60 (46%), Positives = 30/60 (50%), Gaps = 16/60 (26%) Query: 170 GGGRGGRGGGRGGGGRG----------GGRGGGFRGG-----RGGGGGGFRGGRGGGFRG 214 GGG GG G + GGGRG GG GG+ GG GG G GF GG GGG G Sbjct: 13 GGGFGG-GSCQLGGGRGVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGG 71 Score = 42.4 bits (98), Expect = 3e-04 Identities = 21/34 (61%), Positives = 21/34 (61%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGG 196 G G GGG GG GG GGG GGG GGGF GG Sbjct: 55 GGAGSGFGGGYGGGLGGGYGGGLGGGFGGGFAGG 88 Score = 42.0 bits (97), Expect = 4e-04 Identities = 28/68 (41%), Positives = 31/68 (45%), Gaps = 9/68 (13%) Query: 5 GGGRGGFNRG-------GGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF-GRGGGRG 56 GG GG+ G G G GF GG GG GGG GG F GG GGF G G Sbjct: 39 GGSAGGYGGGVSCGFGGGAGSGFG-GGYGGGLGGGYGGGLGGGFGGGFAGGFVDFGACDG 97 Query: 57 GFNKGQDQ 64 G G ++ Sbjct: 98 GLLTGNEK 105 Score = 38.5 bits (88), Expect = 0.004 Identities = 25/57 (43%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 2 SFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRG-GGRGGFGRGGGRGG 57 S+ GG GG + GGG G + + G GG GGG G GG G G GGG GG Sbjct: 11 SYGGGFGGGSCQLGGGRGVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGG 67 Score = 29.3 bits (64), Expect = 2.7 Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 7/47 (14%) Query: 25 SSNHFRGGGGGGGGGNFRGGGRG------GFGRGGGRGGFNKGQDQG 65 SS+ GGG GGG GGGRG F GG GG+ G G Sbjct: 7 SSSASYGGGFGGGSCQL-GGGRGVSTCSTRFVSGGSAGGYGGGVSCG 52 >gi|5803036 heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens] Length = 305 Score = 57.4 bits (137), Expect = 9e-09 Identities = 36/80 (45%), Positives = 42/80 (52%), Gaps = 25/80 (31%) Query: 3 FRGGGRGGFNR-GGGGGGFNRGGS------------SNH------FRGGGGGGGGGNFRG 43 + GGG GG+N GGGGGG + GGS S H + GGGGGGGG+ G Sbjct: 223 YGGGGGGGYNAYGGGGGGSSYGGSDYGNGFGGFGSYSQHQSSYGPMKSGGGGGGGGSSWG 282 Query: 44 GG------RGGFGRGGGRGG 57 G RGG+G GGG GG Sbjct: 283 GRSNSGPYRGGYGGGGGYGG 302 Score = 54.3 bits (129), Expect = 8e-08 Identities = 45/132 (34%), Positives = 61/132 (46%), Gaps = 21/132 (15%) Query: 104 LENKEQIGKV-------DEIFGQLRDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQR 156 +E+ Q G V D+ G+ R F F +N A+ + KF+ + +++ Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVY--FQNHDAADKAAVVKFHPIQGHRVEVKK 172 Query: 157 FLPRPPGEKGPPRGGGRGGRGGGRGGGGRGGGR---------GGGFR--GGRGGGGGGFR 205 +P+ G GG R RGG RGG GRGGGR GGG+ GG GGGGGG Sbjct: 173 AVPKEDIYSGGGGGGSRSSRGG-RGGRGRGGGRDQNGLSKGGGGGYNSYGGYGGGGGGGY 231 Query: 206 GGRGGGFRGRGH 217 GGG G + Sbjct: 232 NAYGGGGGGSSY 243 Score = 52.0 bits (123), Expect = 4e-07 Identities = 31/63 (49%), Positives = 32/63 (50%), Gaps = 9/63 (14%) Query: 163 GEKGPPRGGGR-------GGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGR--GGGFR 213 G G RGGGR GG GG GG GGG GGG+ GGGGG GG G GF Sbjct: 194 GRGGRGRGGGRDQNGLSKGGGGGYNSYGGYGGGGGGGYNAYGGGGGGSSYGGSDYGNGFG 253 Query: 214 GRG 216 G G Sbjct: 254 GFG 256 Score = 51.2 bits (121), Expect = 7e-07 Identities = 33/68 (48%), Positives = 34/68 (50%), Gaps = 20/68 (29%) Query: 6 GGRGGFNRGGG----------GGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGG-- 53 GGRGG RGGG GGG+N G GGGGGGG N GGG GG GG Sbjct: 193 GGRGGRGRGGGRDQNGLSKGGGGGYNSYGGY-----GGGGGGGYNAYGGGGGGSSYGGSD 247 Query: 54 ---GRGGF 58 G GGF Sbjct: 248 YGNGFGGF 255 Score = 50.4 bits (119), Expect = 1e-06 Identities = 36/90 (40%), Positives = 43/90 (47%), Gaps = 27/90 (30%) Query: 4 RGGGR--GGFNRGGGGG-----GFNRGGSSNHFRGGGGGGG---GGNFRGGGRGGFGR-- 51 RGGGR G ++GGGGG G+ GG + GGGGGG GG+ G G GGFG Sbjct: 200 RGGGRDQNGLSKGGGGGYNSYGGYGGGGGGGYNAYGGGGGGSSYGGSDYGNGFGGFGSYS 259 Query: 52 -------------GGGRGGFNKG--QDQGP 66 GGG GG + G + GP Sbjct: 260 QHQSSYGPMKSGGGGGGGGSSWGGRSNSGP 289 Score = 47.8 bits (112), Expect = 7e-06 Identities = 30/70 (42%), Positives = 36/70 (51%), Gaps = 7/70 (10%) Query: 3 FRGGGRGGF--NRGGGGGGFNRGGSSNHFRGGGGGGGG---GNFRGGGRGGFGRGGGRGG 57 + GGG GG +RGG GG GG + GGGGG G + GGG GG+ GG GG Sbjct: 180 YSGGGGGGSRSSRGGRGGRGRGGGRDQNGLSKGGGGGYNSYGGYGGGGGGGYNAYGGGGG 239 Query: 58 FNK--GQDQG 65 + G D G Sbjct: 240 GSSYGGSDYG 249 Score = 40.8 bits (94), Expect = 9e-04 Identities = 21/37 (56%), Positives = 23/37 (62%), Gaps = 3/37 (8%) Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGG 202 GP + GG GG GGG GGR G +RGG GGGGG Sbjct: 266 GPMKSGGGGG-GGGSSWGGRSNS--GPYRGGYGGGGG 299 Score = 39.3 bits (90), Expect = 0.003 Identities = 31/78 (39%), Positives = 32/78 (41%), Gaps = 24/78 (30%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGG---GRG-GGF--------------RGGRGGGGGGF 204 G G GGG GGG GG GG G G GGF GG GGGGG Sbjct: 221 GGYGGGGGGGYNAYGGGGGGSSYGGSDYGNGFGGFGSYSQHQSSYGPMKSGGGGGGGGSS 280 Query: 205 RGGRG------GGFRGRG 216 GGR GG+ G G Sbjct: 281 WGGRSNSGPYRGGYGGGG 298 Score = 36.6 bits (83), Expect = 0.017 Identities = 29/71 (40%), Positives = 31/71 (43%), Gaps = 23/71 (32%) Query: 164 EKGPPRGGGRG----GRGGGRGGGG---RGGGRGGGFRGGR--GGGGGGF---------- 204 + G +GGG G G GG GGGG GGG GG GG G G GGF Sbjct: 206 QNGLSKGGGGGYNSYGGYGGGGGGGYNAYGGGGGGSSYGGSDYGNGFGGFGSYSQHQSSY 265 Query: 205 ----RGGRGGG 211 GG GGG Sbjct: 266 GPMKSGGGGGG 276 Score = 35.4 bits (80), Expect = 0.038 Identities = 19/31 (61%), Positives = 22/31 (70%), Gaps = 4/31 (12%) Query: 14 GGGGGGFNRGGSSNH--FRGG--GGGGGGGN 40 GGGGGG + GG SN +RGG GGGG GG+ Sbjct: 273 GGGGGGSSWGGRSNSGPYRGGYGGGGGYGGS 303 >gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1 isoform d [Homo sapiens] Length = 756 Score = 57.0 bits (136), Expect = 1e-08 Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 24/89 (26%) Query: 3 FRGGGRGGFNRGGGGGGFNR-------GGSSNHFRG-GGGGGGGGNFRGG----GRGGFG 50 F G GGF GGGGGF R GG+ F+ GGG GGGGN+RGG G GG+ Sbjct: 509 FDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYS 568 Query: 51 RG------------GGRGGFNKGQDQGPP 67 + RG +N+ Q PP Sbjct: 569 QNRWGNNNRDNNNSNNRGSYNRAPQQQPP 597 Score = 50.4 bits (119), Expect = 1e-06 Identities = 32/65 (49%), Positives = 34/65 (52%), Gaps = 13/65 (20%) Query: 161 PPGEKGPPRGGGRGGRGGGRGGG-------GRGGGRGGGF--RGGRGGGGGGFRGG---- 207 PP EK GG G RG G GGG G GG GGF RGG GGGG +RGG Sbjct: 503 PPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRS 562 Query: 208 RGGGF 212 GGG+ Sbjct: 563 GGGGY 567 Score = 45.4 bits (106), Expect = 4e-05 Identities = 36/85 (42%), Positives = 41/85 (48%), Gaps = 13/85 (15%) Query: 145 YIDPYKLLPLQRF----LPRPPGEKGPPRGGGRGGRGGGRGGGG-RGGGRGGGF-----R 194 ++D + LQR L R E+G G R RGGGG RG G GGGF R Sbjct: 473 FLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENR 532 Query: 195 GGRGGGGGGFR---GGRGGGFRGRG 216 G GG GGF+ GG GGG RG Sbjct: 533 GPPGGNRGGFQNRGGGSGGGGNYRG 557 Score = 40.8 bits (94), Expect = 9e-04 Identities = 28/58 (48%), Positives = 31/58 (53%), Gaps = 10/58 (17%) Query: 163 GEKGPPRGGG------RGGRGGGRGG-GGRGGGRGGG--FRGG-RGGGGGGFRGGRGG 210 G +G GGG RG GG RGG RGGG GGG +RGG GGGG+ R G Sbjct: 516 GFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWG 573 Score = 29.6 bits (65), Expect = 2.1 Identities = 15/39 (38%), Positives = 18/39 (46%) Query: 161 PPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGG 199 P G +G + G G GGG GG GGG+ R G Sbjct: 535 PGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWG 573 >gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1 isoform a [Homo sapiens] Length = 856 Score = 57.0 bits (136), Expect = 1e-08 Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 24/89 (26%) Query: 3 FRGGGRGGFNRGGGGGGFNR-------GGSSNHFRG-GGGGGGGGNFRGG----GRGGFG 50 F G GGF GGGGGF R GG+ F+ GGG GGGGN+RGG G GG+ Sbjct: 609 FDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYS 668 Query: 51 RG------------GGRGGFNKGQDQGPP 67 + RG +N+ Q PP Sbjct: 669 QNRWGNNNRDNNNSNNRGSYNRAPQQQPP 697 Score = 50.4 bits (119), Expect = 1e-06 Identities = 32/65 (49%), Positives = 34/65 (52%), Gaps = 13/65 (20%) Query: 161 PPGEKGPPRGGGRGGRGGGRGGG-------GRGGGRGGGF--RGGRGGGGGGFRGG---- 207 PP EK GG G RG G GGG G GG GGF RGG GGGG +RGG Sbjct: 603 PPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRS 662 Query: 208 RGGGF 212 GGG+ Sbjct: 663 GGGGY 667 Score = 45.4 bits (106), Expect = 4e-05 Identities = 36/85 (42%), Positives = 41/85 (48%), Gaps = 13/85 (15%) Query: 145 YIDPYKLLPLQRF----LPRPPGEKGPPRGGGRGGRGGGRGGGG-RGGGRGGGF-----R 194 ++D + LQR L R E+G G R RGGGG RG G GGGF R Sbjct: 573 FLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENR 632 Query: 195 GGRGGGGGGFR---GGRGGGFRGRG 216 G GG GGF+ GG GGG RG Sbjct: 633 GPPGGNRGGFQNRGGGSGGGGNYRG 657 Score = 40.8 bits (94), Expect = 9e-04 Identities = 28/58 (48%), Positives = 31/58 (53%), Gaps = 10/58 (17%) Query: 163 GEKGPPRGGG------RGGRGGGRGG-GGRGGGRGGG--FRGG-RGGGGGGFRGGRGG 210 G +G GGG RG GG RGG RGGG GGG +RGG GGGG+ R G Sbjct: 616 GFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWG 673 Score = 29.6 bits (65), Expect = 2.1 Identities = 15/39 (38%), Positives = 18/39 (46%) Query: 161 PPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGG 199 P G +G + G G GGG GG GGG+ R G Sbjct: 635 PGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWG 673 >gi|56699482 hypothetical protein LOC25940 [Homo sapiens] Length = 518 Score = 57.0 bits (136), Expect = 1e-08 Identities = 32/61 (52%), Positives = 38/61 (62%), Gaps = 7/61 (11%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRG----GGFRGGRGGGGGGFRGG--RGGGFRGRG 216 G G +GGGRGGR GG GGRGGGRG GG+ G GGGGG++ G R GF+ G Sbjct: 350 GRGGHEQGGGRGGR-GGYDHGGRGGGRGNKHQGGWTDGGSGGGGGYQDGGYRDSGFQPGG 408 Query: 217 H 217 + Sbjct: 409 Y 409 Score = 53.5 bits (127), Expect = 1e-07 Identities = 36/66 (54%), Positives = 38/66 (57%), Gaps = 15/66 (22%) Query: 161 PPGEK---GPPRGGGRGGRGGGRGG------GGRGGGRGGGFRGGRGGGGGGFRGGRGGG 211 PP +K GP + GGRGGGRGG GGRGG GG RGGRGG GGRGGG Sbjct: 320 PPWQKRQDGPQQQ--TGGRGGGRGGYEHSSYGGRGGHEQGGGRGGRGGYD---HGGRGGG 374 Query: 212 FRGRGH 217 RG H Sbjct: 375 -RGNKH 379 Score = 53.1 bits (126), Expect = 2e-07 Identities = 32/67 (47%), Positives = 37/67 (55%), Gaps = 7/67 (10%) Query: 4 RGGGRGGFNRGGGGGGFNRGGSSNHFRGG---GGGGGGGNFRGGG--RGGFGRGGGRGGF 58 +GGGRGG RGG G GG N +GG GG GGGG ++ GG GF GG GG Sbjct: 356 QGGGRGG--RGGYDHGGRGGGRGNKHQGGWTDGGSGGGGGYQDGGYRDSGFQPGGYHGGH 413 Query: 59 NKGQDQG 65 + G QG Sbjct: 414 SSGGYQG 420 Score = 50.8 bits (120), Expect = 9e-07 Identities = 31/64 (48%), Positives = 35/64 (54%), Gaps = 8/64 (12%) Query: 4 RGGGRGGFNR---GGGGG---GFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGG 57 RGGGRGG+ GG GG G RGG + GG GGG G +GG G G GGG GG Sbjct: 336 RGGGRGGYEHSSYGGRGGHEQGGGRGGRGGYDHGGRGGGRGNKHQGGWTDG-GSGGG-GG 393 Query: 58 FNKG 61 + G Sbjct: 394 YQDG 397 Score = 48.9 bits (115), Expect = 3e-06 Identities = 33/82 (40%), Positives = 42/82 (51%), Gaps = 20/82 (24%) Query: 4 RGGGRGGFNRG-------GGGGGFNRGG-SSNHFRGGG--GGGGGGNFRGGGRGGFG--- 50 RGGGRG ++G GGGGG+ GG + F+ GG GG G ++GGG GGF Sbjct: 371 RGGGRGNKHQGGWTDGGSGGGGGYQDGGYRDSGFQPGGYHGGHSSGGYQGGGYGGFQTSS 430 Query: 51 -------RGGGRGGFNKGQDQG 65 +GGG N+ QD G Sbjct: 431 SYTGSGYQGGGYQQDNRYQDGG 452 Score = 48.9 bits (115), Expect = 3e-06 Identities = 34/73 (46%), Positives = 37/73 (50%), Gaps = 26/73 (35%) Query: 166 GPPRGGGRGG-------RGGGRGGGG---------------RGGGRGGGFRGGRGGGGGG 203 G +GGG GG G G GGG RGGGRGG RGGRGG GG Sbjct: 416 GGYQGGGYGGFQTSSSYTGSGYQGGGYQQDNRYQDGGHHGDRGGGRGG--RGGRGGRGG- 472 Query: 204 FRGGRGGGFRGRG 216 R G+GGG+ GRG Sbjct: 473 -RAGQGGGWGGRG 484 Score = 47.8 bits (112), Expect = 7e-06 Identities = 30/67 (44%), Positives = 35/67 (52%), Gaps = 9/67 (13%) Query: 3 FRGGGRGGFNRGGG--GGGFNRGG--SSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGF 58 ++GGG GGF G G+ GG N ++ GG G RGGGRGG G GGRGG Sbjct: 418 YQGGGYGGFQTSSSYTGSGYQGGGYQQDNRYQDGGHHGD----RGGGRGGRGGRGGRGG- 472 Query: 59 NKGQDQG 65 GQ G Sbjct: 473 RAGQGGG 479 Score = 47.8 bits (112), Expect = 7e-06 Identities = 28/47 (59%), Positives = 30/47 (63%), Gaps = 7/47 (14%) Query: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGG----RGGGF 212 GG G RGGGRGG G GGRGG R G+GGG GG RG +GG F Sbjct: 451 GGHHGDRGGGRGGRGGRGGRGG--RAGQGGGWGG-RGSQNYHQGGQF 494 Score = 43.5 bits (101), Expect = 1e-04 Identities = 27/51 (52%), Positives = 31/51 (60%), Gaps = 6/51 (11%) Query: 14 GGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGF---GRGGGRGGFNKG 61 GG GGG RGG + GG GG G R GGRGG+ GRGGGRG ++G Sbjct: 334 GGRGGG--RGGYEHSSYGGRGGHEQGGGR-GGRGGYDHGGRGGGRGNKHQG 381 Score = 41.6 bits (96), Expect = 5e-04 Identities = 32/63 (50%), Positives = 35/63 (55%), Gaps = 9/63 (14%) Query: 161 PPGEKGPP---RGGGRGGRGGGRGGGGRGGGRGGGFRGGRGG-GGGGFRGGRGG---GFR 213 PP + PP R G + GGRGGG RGG + GGRGG GG RGGRGG G R Sbjct: 314 PPPPEMPPWQKRQDGPQQQTGGRGGG-RGGYEHSSY-GGRGGHEQGGGRGGRGGYDHGGR 371 Query: 214 GRG 216 G G Sbjct: 372 GGG 374 Score = 39.3 bits (90), Expect = 0.003 Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 9/61 (14%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGG-GFRGGRGGG-------GGGFRGGRGGGFRG 214 G++G RGG RGGRGG G G+GGG GG G + GG GG++ G +G Sbjct: 455 GDRGGGRGG-RGGRGGRGGRAGQGGGWGGRGSQNYHQGGQFEQHFQHGGYQYNHSGFGQG 513 Query: 215 R 215 R Sbjct: 514 R 514 Score = 37.4 bits (85), Expect = 0.010 Identities = 21/48 (43%), Positives = 24/48 (50%) Query: 3 FRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFG 50 ++GGG NR GG G RGG GG GG +GGG GG G Sbjct: 437 YQGGGYQQDNRYQDGGHHGDRGGGRGGRGGRGGRGGRAGQGGGWGGRG 484 Score = 37.4 bits (85), Expect = 0.010 Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 7/67 (10%) Query: 3 FRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGG--NFRGGGR--GGFGRGG---GR 55 ++ GG G GG GG RGG GGG GG G N+ GG+ F GG Sbjct: 448 YQDGGHHGDRGGGRGGRGGRGGRGGRAGQGGGWGGRGSQNYHQGGQFEQHFQHGGYQYNH 507 Query: 56 GGFNKGQ 62 GF +G+ Sbjct: 508 SGFGQGR 514 Score = 36.2 bits (82), Expect = 0.022 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGG--RGGGGGGFRGG---RGGGFRGRGH 217 G GGG GG R G + GG GG G +GGG GGF+ G G++G G+ Sbjct: 386 GGSGGGGGYQDGGYRDSGFQPGGYHGGHSSGGYQGGGYGGFQTSSSYTGSGYQGGGY 442 Score = 35.8 bits (81), Expect = 0.029 Identities = 21/43 (48%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Query: 24 GSSNHFRGGGGGGGGGNFRG-GGRGGFGRGGGRGGFNKGQDQG 65 G G GGG GG GGRGG +GGGRGG G D G Sbjct: 328 GPQQQTGGRGGGRGGYEHSSYGGRGGHEQGGGRGG-RGGYDHG 369 >gi|110347449 POU domain, class 4, transcription factor 1 [Homo sapiens] Length = 419 Score = 57.0 bits (136), Expect = 1e-08 Identities = 32/73 (43%), Positives = 34/73 (46%) Query: 7 GRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQGP 66 G GG GGGG + G GGGGG GGG GGG G G GGG GG G P Sbjct: 130 GAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGPGGGGGGGPGGGGGGPGGGLLGGSAHP 189 Query: 67 PERVVLLGEFLHP 79 + LG HP Sbjct: 190 HPHMHSLGHLSHP 202 Score = 55.8 bits (133), Expect = 3e-08 Identities = 31/54 (57%), Positives = 31/54 (57%), Gaps = 5/54 (9%) Query: 163 GEKGPPRGGGR-----GGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGG 211 G G GGG GG GG GGGG GGG GGG GG GGGGGG GG GG Sbjct: 132 GGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGPGGGGGGGPGGGGGGPGGGLLGG 185 Score = 53.9 bits (128), Expect = 1e-07 Identities = 28/45 (62%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Query: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214 GG G GGG G GG GGG GGG GG GGG GG GG GGG G Sbjct: 141 GGAHDGPGGGGGPGG-GGGPGGGPGGGGGGGPGGGGGGPGGGLLG 184 Score = 51.6 bits (122), Expect = 5e-07 Identities = 28/49 (57%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGG 211 G G G GG G GGGG GG GGG GG GGGGGG GG GGG Sbjct: 130 GAGGAGAAAGGGGAHDGPGGGGGPGG-GGGPGGGPGGGGGGGPGGGGGG 177 Score = 49.3 bits (116), Expect = 3e-06 Identities = 25/45 (55%), Positives = 25/45 (55%) Query: 172 GRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216 G GG G GGGG G GGG G GGG GG GG GGG G G Sbjct: 130 GAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGPGGGGGGGPGGG 174 Score = 46.2 bits (108), Expect = 2e-05 Identities = 25/40 (62%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Query: 161 PPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGG 200 P G GP GGG GG GG GGGG GGG GGG GG GG Sbjct: 147 PGGGGGPGGGGGPGGGPGGGGGGGPGGG-GGGPGGGLLGG 185 >gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 [Homo sapiens] Length = 2191 Score = 57.0 bits (136), Expect = 1e-08 Identities = 32/68 (47%), Positives = 32/68 (47%), Gaps = 13/68 (19%) Query: 162 PGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGG-------------GGGFRGGR 208 PG P GGG GG GGG GG G GGG GG GG G G GGG GG Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300 Query: 209 GGGFRGRG 216 GG G G Sbjct: 301 GGSSAGYG 308 Score = 49.3 bits (116), Expect = 3e-06 Identities = 31/72 (43%), Positives = 33/72 (45%), Gaps = 18/72 (25%) Query: 3 FRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRG-------------GF 49 + G R G GGGGGG GGS GGGGGGGG G G G G Sbjct: 240 YPGYSRPGAGGGGGGGGGGGGGS-----GGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294 Query: 50 GRGGGRGGFNKG 61 G GGG GG + G Sbjct: 295 GGGGGYGGSSAG 306 Score = 47.0 bits (110), Expect = 1e-05 Identities = 27/58 (46%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 159 PRPPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216 P +G P G R G G GGG GGG GG GGGGGG GG G G G G Sbjct: 224 PLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGG--GGAGAGGAGAG 279 Score = 45.8 bits (107), Expect = 3e-05 Identities = 28/64 (43%), Positives = 29/64 (45%), Gaps = 12/64 (18%) Query: 160 RPPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRG-----------GRGGGGGGFRGGR 208 RP G GGG GG GG GGGG G G GG G GGGGGG GG Sbjct: 245 RPGAGGGGGGGGGGGGGSGG-GGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGS 303 Query: 209 GGGF 212 G+ Sbjct: 304 SAGY 307 Score = 42.4 bits (98), Expect = 3e-04 Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 14/64 (21%) Query: 5 GGGRGGFNRGGGGGGFNRGGS-------SNHFRGGGGGGGGGNFRGGGRGGFG------- 50 GGG GG GGGGGG GG+ + GGGGG GG G+G Sbjct: 256 GGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315 Query: 51 RGGG 54 +GGG Sbjct: 316 QGGG 319 Score = 40.0 bits (92), Expect = 0.002 Identities = 26/67 (38%), Positives = 27/67 (40%), Gaps = 24/67 (35%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRG-------------GGRGGFGR 51 GGG GG G GGGG GGGG G GG G GG GG G Sbjct: 252 GGGGGGGGGGSGGGG-----------GGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300 Query: 52 GGGRGGF 58 GG G+ Sbjct: 301 GGSSAGY 307 Score = 38.5 bits (88), Expect = 0.004 Identities = 21/38 (55%), Positives = 22/38 (57%), Gaps = 4/38 (10%) Query: 27 NHFRG---GGGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61 NH+ G G GGGGG GGG GG G GGG GG G Sbjct: 238 NHYPGYSRPGAGGGGGG-GGGGGGGSGGGGGGGGAGAG 274 Score = 36.6 bits (83), Expect = 0.017 Identities = 35/109 (32%), Positives = 41/109 (37%), Gaps = 36/109 (33%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFR-----------GGGGGGGGGNFRGGG-------R 46 GGG G GGGGG G + GGGGGG GG+ G G + Sbjct: 257 GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQ 316 Query: 47 GG---FGRGGG-------------RGGFNK--GQDQGPPERVVLLGEFL 77 GG G GGG GGF + GQ+Q P L + L Sbjct: 317 GGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365 Score = 35.0 bits (79), Expect = 0.049 Identities = 30/97 (30%), Positives = 32/97 (32%), Gaps = 46/97 (47%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRG---------------------GGRGGGFRG------ 195 G G GGG GG GGG GGGG G GG GGG+ G Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYG 308 Query: 196 --------------GRGGGGG-----GFRGGRGGGFR 213 G GGGG G GGF+ Sbjct: 309 VLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQ 345 >gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo sapiens] Length = 2231 Score = 57.0 bits (136), Expect = 1e-08 Identities = 32/68 (47%), Positives = 32/68 (47%), Gaps = 13/68 (19%) Query: 162 PGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGG-------------GGGFRGGR 208 PG P GGG GG GGG GG G GGG GG GG G G GGG GG Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300 Query: 209 GGGFRGRG 216 GG G G Sbjct: 301 GGSSAGYG 308 Score = 49.3 bits (116), Expect = 3e-06 Identities = 31/72 (43%), Positives = 33/72 (45%), Gaps = 18/72 (25%) Query: 3 FRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRG-------------GF 49 + G R G GGGGGG GGS GGGGGGGG G G G G Sbjct: 240 YPGYSRPGAGGGGGGGGGGGGGS-----GGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294 Query: 50 GRGGGRGGFNKG 61 G GGG GG + G Sbjct: 295 GGGGGYGGSSAG 306 Score = 47.0 bits (110), Expect = 1e-05 Identities = 27/58 (46%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 159 PRPPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216 P +G P G R G G GGG GGG GG GGGGGG GG G G G G Sbjct: 224 PLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGG--GGAGAGGAGAG 279 Score = 45.8 bits (107), Expect = 3e-05 Identities = 28/64 (43%), Positives = 29/64 (45%), Gaps = 12/64 (18%) Query: 160 RPPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRG-----------GRGGGGGGFRGGR 208 RP G GGG GG GG GGGG G G GG G GGGGGG GG Sbjct: 245 RPGAGGGGGGGGGGGGGSGG-GGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGS 303 Query: 209 GGGF 212 G+ Sbjct: 304 SAGY 307 Score = 42.4 bits (98), Expect = 3e-04 Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 14/64 (21%) Query: 5 GGGRGGFNRGGGGGGFNRGGS-------SNHFRGGGGGGGGGNFRGGGRGGFG------- 50 GGG GG GGGGGG GG+ + GGGGG GG G+G Sbjct: 256 GGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315 Query: 51 RGGG 54 +GGG Sbjct: 316 QGGG 319 Score = 40.0 bits (92), Expect = 0.002 Identities = 26/67 (38%), Positives = 27/67 (40%), Gaps = 24/67 (35%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRG-------------GGRGGFGR 51 GGG GG G GGGG GGGG G GG G GG GG G Sbjct: 252 GGGGGGGGGGSGGGG-----------GGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300 Query: 52 GGGRGGF 58 GG G+ Sbjct: 301 GGSSAGY 307 Score = 38.5 bits (88), Expect = 0.004 Identities = 21/38 (55%), Positives = 22/38 (57%), Gaps = 4/38 (10%) Query: 27 NHFRG---GGGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61 NH+ G G GGGGG GGG GG G GGG GG G Sbjct: 238 NHYPGYSRPGAGGGGGG-GGGGGGGSGGGGGGGGAGAG 274 Score = 36.6 bits (83), Expect = 0.017 Identities = 35/109 (32%), Positives = 41/109 (37%), Gaps = 36/109 (33%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFR-----------GGGGGGGGGNFRGGG-------R 46 GGG G GGGGG G + GGGGGG GG+ G G + Sbjct: 257 GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQ 316 Query: 47 GG---FGRGGG-------------RGGFNK--GQDQGPPERVVLLGEFL 77 GG G GGG GGF + GQ+Q P L + L Sbjct: 317 GGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365 Score = 35.0 bits (79), Expect = 0.049 Identities = 30/97 (30%), Positives = 32/97 (32%), Gaps = 46/97 (47%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRG---------------------GGRGGGFRG------ 195 G G GGG GG GGG GGGG G GG GGG+ G Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYG 308 Query: 196 --------------GRGGGGG-----GFRGGRGGGFR 213 G GGGG G GGF+ Sbjct: 309 VLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQ 345 >gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 [Homo sapiens] Length = 2178 Score = 57.0 bits (136), Expect = 1e-08 Identities = 32/68 (47%), Positives = 32/68 (47%), Gaps = 13/68 (19%) Query: 162 PGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGG-------------GGGFRGGR 208 PG P GGG GG GGG GG G GGG GG GG G G GGG GG Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300 Query: 209 GGGFRGRG 216 GG G G Sbjct: 301 GGSSAGYG 308 Score = 49.3 bits (116), Expect = 3e-06 Identities = 31/72 (43%), Positives = 33/72 (45%), Gaps = 18/72 (25%) Query: 3 FRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRG-------------GF 49 + G R G GGGGGG GGS GGGGGGGG G G G G Sbjct: 240 YPGYSRPGAGGGGGGGGGGGGGS-----GGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294 Query: 50 GRGGGRGGFNKG 61 G GGG GG + G Sbjct: 295 GGGGGYGGSSAG 306 Score = 47.0 bits (110), Expect = 1e-05 Identities = 27/58 (46%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 159 PRPPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRG 216 P +G P G R G G GGG GGG GG GGGGGG GG G G G G Sbjct: 224 PLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGG--GGAGAGGAGAG 279 Score = 45.8 bits (107), Expect = 3e-05 Identities = 28/64 (43%), Positives = 29/64 (45%), Gaps = 12/64 (18%) Query: 160 RPPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRG-----------GRGGGGGGFRGGR 208 RP G GGG GG GG GGGG G G GG G GGGGGG GG Sbjct: 245 RPGAGGGGGGGGGGGGGSGG-GGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGS 303 Query: 209 GGGF 212 G+ Sbjct: 304 SAGY 307 Score = 42.4 bits (98), Expect = 3e-04 Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 14/64 (21%) Query: 5 GGGRGGFNRGGGGGGFNRGGS-------SNHFRGGGGGGGGGNFRGGGRGGFG------- 50 GGG GG GGGGGG GG+ + GGGGG GG G+G Sbjct: 256 GGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315 Query: 51 RGGG 54 +GGG Sbjct: 316 QGGG 319 Score = 40.0 bits (92), Expect = 0.002 Identities = 26/67 (38%), Positives = 27/67 (40%), Gaps = 24/67 (35%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRG-------------GGRGGFGR 51 GGG GG G GGGG GGGG G GG G GG GG G Sbjct: 252 GGGGGGGGGGSGGGG-----------GGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300 Query: 52 GGGRGGF 58 GG G+ Sbjct: 301 GGSSAGY 307 Score = 38.5 bits (88), Expect = 0.004 Identities = 21/38 (55%), Positives = 22/38 (57%), Gaps = 4/38 (10%) Query: 27 NHFRG---GGGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61 NH+ G G GGGGG GGG GG G GGG GG G Sbjct: 238 NHYPGYSRPGAGGGGGG-GGGGGGGSGGGGGGGGAGAG 274 Score = 36.6 bits (83), Expect = 0.017 Identities = 35/109 (32%), Positives = 41/109 (37%), Gaps = 36/109 (33%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFR-----------GGGGGGGGGNFRGGG-------R 46 GGG G GGGGG G + GGGGGG GG+ G G + Sbjct: 257 GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQ 316 Query: 47 GG---FGRGGG-------------RGGFNK--GQDQGPPERVVLLGEFL 77 GG G GGG GGF + GQ+Q P L + L Sbjct: 317 GGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365 Score = 35.0 bits (79), Expect = 0.049 Identities = 30/97 (30%), Positives = 32/97 (32%), Gaps = 46/97 (47%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRG---------------------GGRGGGFRG------ 195 G G GGG GG GGG GGGG G GG GGG+ G Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYG 308 Query: 196 --------------GRGGGGG-----GFRGGRGGGFR 213 G GGGG G GGF+ Sbjct: 309 VLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQ 345 >gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo sapiens] Length = 284 Score = 56.6 bits (135), Expect = 2e-08 Identities = 33/61 (54%), Positives = 33/61 (54%), Gaps = 10/61 (16%) Query: 166 GPPRGGG--RGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGG--------RGGGFRGR 215 GP GGG RGG G GGG GGG GGG RG R G GGG RGG R RGR Sbjct: 156 GPGAGGGAERGGSGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALRGR 215 Query: 216 G 216 G Sbjct: 216 G 216 Score = 53.9 bits (128), Expect = 1e-07 Identities = 29/49 (59%), Positives = 30/49 (61%), Gaps = 4/49 (8%) Query: 15 GGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGG-FGRGGGRGGFNKGQ 62 G GGG RGGS GGGGGGGGG GGGRG GRGGG G + Q Sbjct: 158 GAGGGAERGGSGRSSAGGGGGGGGG---GGGRGSRRGRGGGERGGPRAQ 203 Score = 46.2 bits (108), Expect = 2e-05 Identities = 26/51 (50%), Positives = 27/51 (52%), Gaps = 5/51 (9%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGR 55 G G GG GG G + GG GGGGGGGGG GRGG RGG R Sbjct: 156 GPGAGGGAERGGSGRSSAGGG-----GGGGGGGGGRGSRRGRGGGERGGPR 201 Score = 32.3 bits (72), Expect = 0.32 Identities = 15/31 (48%), Positives = 16/31 (51%) Query: 32 GGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQ 62 G G GGG G GR G GGG GG G+ Sbjct: 156 GPGAGGGAERGGSGRSSAGGGGGGGGGGGGR 186 Score = 28.9 bits (63), Expect = 3.5 Identities = 14/32 (43%), Positives = 15/32 (46%) Query: 34 GGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQG 65 G G GG GG G GGG GG G +G Sbjct: 156 GPGAGGGAERGGSGRSSAGGGGGGGGGGGGRG 187 >gi|109148552 keratin 3 [Homo sapiens] Length = 628 Score = 56.6 bits (135), Expect = 2e-08 Identities = 29/55 (52%), Positives = 31/55 (56%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFN 59 GGG GG GG GGGF+ GG S G GGGGG G GGG GF G G G + Sbjct: 539 GGGYGGGMGGGLGGGFSAGGGSGSGFGRGGGGGIGGGFGGGSSGFSGGSGFGSIS 593 Score = 55.5 bits (132), Expect = 4e-08 Identities = 32/51 (62%), Positives = 32/51 (62%), Gaps = 4/51 (7%) Query: 170 GGGR-GGRGGGRGGGGRGGGRGGGFRGGRGGG-GGGFRGGRG--GGFRGRG 216 GG R GG GGGR GG GGGF G GGG GGGF GGRG GGF G G Sbjct: 73 GGSRAGGFGGGRSSCAFAGGYGGGFGSGYGGGFGGGFGGGRGMGGGFGGAG 123 Score = 53.9 bits (128), Expect = 1e-07 Identities = 30/49 (61%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Query: 170 GGGRGGRGGGRGGG-GRGGGRGGGF-RGGRGGGGGGFRGGRGGGFRGRG 216 GG GG GGG GGG GGG G GF RGG GG GGGF GG G G G Sbjct: 540 GGYGGGMGGGLGGGFSAGGGSGSGFGRGGGGGIGGGFGGGSSGFSGGSG 588 Score = 52.8 bits (125), Expect = 2e-07 Identities = 31/66 (46%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 2 SFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61 +F GG GGF G GGGF G GGG GG GG GG GG G GG GGF Sbjct: 88 AFAGGYGGGFG-SGYGGGFGGGFGGGRGMGGGFGGAGGFGGAGGFGGAGGFGGPGGFGGS 146 Query: 62 QDQGPP 67 G P Sbjct: 147 GGFGGP 152 Score = 52.4 bits (124), Expect = 3e-07 Identities = 35/63 (55%), Positives = 36/63 (57%), Gaps = 10/63 (15%) Query: 163 GEKGPPRGGGR------GGRGGGRGGGGRGGGRGGGFRGGRG-GGGGGFRGGRG--GGFR 213 G + GGGR GG GGG G G GGG GGGF GGRG GGG G GG G GGF Sbjct: 74 GSRAGGFGGGRSSCAFAGGYGGGFGSG-YGGGFGGGFGGGRGMGGGFGGAGGFGGAGGFG 132 Query: 214 GRG 216 G G Sbjct: 133 GAG 135 Score = 51.6 bits (122), Expect = 5e-07 Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 12/110 (10%) Query: 114 DEIFGQLRDFY--FSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPGEKGPPRGG 171 D++ LRD+ +VKL+ +++ ++++KL + + Y++ Sbjct: 476 DDLARLLRDYQELMNVKLALDVEIATYRKLLEG--EEYRMSGECPSAVSISVVSSSTTSA 533 Query: 172 GRGGRGGGRGGGGRGGGRGGGFRGGRG-------GGGGGFRGGRGGGFRG 214 GG GGG GGG GGG GGGF G G GGGGG GG GGG G Sbjct: 534 SAGGYGGGYGGG-MGGGLGGGFSAGGGSGSGFGRGGGGGIGGGFGGGSSG 582 Score = 51.2 bits (121), Expect = 7e-07 Identities = 36/84 (42%), Positives = 40/84 (47%), Gaps = 3/84 (3%) Query: 3 FRGGGRGGFNRGGG-GGGFNRGGSSNHFRGGGGGGGGGNFRG-GGRGGFGRGGGRGGFNK 60 F GG GG GGG GG GG+ F G GG GG G F G GG GG G G GGF Sbjct: 105 FGGGFGGGRGMGGGFGGAGGFGGAGG-FGGAGGFGGPGGFGGSGGFGGPGSLGSPGGFGP 163 Query: 61 GQDQGPPERVVLLGEFLHPCEDDI 84 G G + V + L P +I Sbjct: 164 GGFPGGIQEVTINQSLLQPLNVEI 187 Score = 50.1 bits (118), Expect = 1e-06 Identities = 33/70 (47%), Positives = 35/70 (50%), Gaps = 9/70 (12%) Query: 5 GGGR-GGFNRGGG------GGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGG 57 GG R GGF GGG GG+ G S + G GGG GGG GGG GG G GG GG Sbjct: 73 GGSRAGGF--GGGRSSCAFAGGYGGGFGSGYGGGFGGGFGGGRGMGGGFGGAGGFGGAGG 130 Query: 58 FNKGQDQGPP 67 F G P Sbjct: 131 FGGAGGFGGP 140 Score = 50.1 bits (118), Expect = 1e-06 Identities = 27/51 (52%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Query: 163 GEKGPPRGGGRGG--RGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGG 211 G G GGG GG GG G G G G GGG GG GGG GF GG G G Sbjct: 540 GGYGGGMGGGLGGGFSAGGGSGSGFGRGGGGGIGGGFGGGSSGFSGGSGFG 590 Score = 49.7 bits (117), Expect = 2e-06 Identities = 32/54 (59%), Positives = 32/54 (59%), Gaps = 7/54 (12%) Query: 170 GGGRG-GRGGGRGGG-GRGGGRGGGFRGGRG-GGGGGFRGGRG----GGFRGRG 216 GGG G G GGG GGG G G G GGGF G G GG GGF G G GGF G G Sbjct: 94 GGGFGSGYGGGFGGGFGGGRGMGGGFGGAGGFGGAGGFGGAGGFGGPGGFGGSG 147 Score = 48.5 bits (114), Expect = 4e-06 Identities = 28/51 (54%), Positives = 28/51 (54%), Gaps = 4/51 (7%) Query: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRG----GRGGGFRGRG 216 GG GG GGGRG GG GG GG G GG GGF G G GGF G G Sbjct: 103 GGFGGGFGGGRGMGGGFGGAGGFGGAGGFGGAGGFGGPGGFGGSGGFGGPG 153 Score = 48.5 bits (114), Expect = 4e-06 Identities = 31/68 (45%), Positives = 35/68 (51%), Gaps = 11/68 (16%) Query: 5 GGGRGGFNRGGGGG-GFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGR------GGGRGG 57 GG GGF+ GGG G GF RGG GGG GGG F GG GFG G GG Sbjct: 548 GGLGGGFSAGGGSGSGFGRGGGGGI--GGGFGGGSSGFSGG--SGFGSISGARYGVSGGG 603 Query: 58 FNKGQDQG 65 F+ ++G Sbjct: 604 FSSASNRG 611 Score = 46.6 bits (109), Expect = 2e-05 Identities = 31/61 (50%), Positives = 33/61 (54%), Gaps = 6/61 (9%) Query: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNKGQDQ 64 GG GG+ GGG GG GG S GGG G G G GGG GG G GGG GF+ G Sbjct: 536 GGYGGGY--GGGMGGGLGGGFS---AGGGSGSGFGRGGGGGIGG-GFGGGSSGFSGGSGF 589 Query: 65 G 65 G Sbjct: 590 G 590 Score = 45.4 bits (106), Expect = 4e-05 Identities = 30/58 (51%), Positives = 31/58 (53%), Gaps = 7/58 (12%) Query: 5 GGGRG-GFNRGGGGG---GFNRGGSSNHFRGGGGGGG-GGNFRGGGRGGFGRGGGRGG 57 GGG G GF RGGGGG GF GG S+ F GG G G G G GGF RGG Sbjct: 557 GGGSGSGFGRGGGGGIGGGF--GGGSSGFSGGSGFGSISGARYGVSGGGFSSASNRGG 612 Score = 45.1 bits (105), Expect = 5e-05 Identities = 29/57 (50%), Positives = 29/57 (50%), Gaps = 8/57 (14%) Query: 166 GPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGG-------GFRGGRG-GGFRG 214 G GGG GG GG G GG GG G G GG GG GG G GG G GGF G Sbjct: 112 GRGMGGGFGGAGGFGGAGGFGGAGGFGGPGGFGGSGGFGGPGSLGSPGGFGPGGFPG 168 Score = 44.7 bits (104), Expect = 6e-05 Identities = 26/48 (54%), Positives = 26/48 (54%), Gaps = 5/48 (10%) Query: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGG-GGFRGGR----GGGF 212 GGG G G GGGG GGG GGG G GG G G G R GGGF Sbjct: 557 GGGSGSGFGRGGGGGIGGGFGGGSSGFSGGSGFGSISGARYGVSGGGF 604 Score = 43.5 bits (101), Expect = 1e-04 Identities = 29/72 (40%), Positives = 29/72 (40%), Gaps = 27/72 (37%) Query: 170 GGGRGGRGGGRGGGG---------------------RGGGRGGGFRGGR------GGGGG 202 GG GG G R G G GG R GGF GGR GG GG Sbjct: 36 GGAGGGAYGFRSGAGGFGSRSLYNLGGNKSISISVAAGGSRAGGFGGGRSSCAFAGGYGG 95 Query: 203 GFRGGRGGGFRG 214 GF G GGGF G Sbjct: 96 GFGSGYGGGFGG 107 Score = 42.7 bits (99), Expect = 2e-04 Identities = 33/87 (37%), Positives = 33/87 (37%), Gaps = 33/87 (37%) Query: 5 GGGRGGFNRGGGG--------------------------GGFNRGGSSNHFRGGGGGGGG 38 GGG GF G GG GGF G SS F GG GGG G Sbjct: 39 GGGAYGFRSGAGGFGSRSLYNLGGNKSISISVAAGGSRAGGFGGGRSSCAFAGGYGGGFG 98 Query: 39 -------GNFRGGGRGGFGRGGGRGGF 58 G GGGRG G GG GGF Sbjct: 99 SGYGGGFGGGFGGGRGMGGGFGGAGGF 125 Score = 42.4 bits (98), Expect = 3e-04 Identities = 28/52 (53%), Positives = 28/52 (53%), Gaps = 9/52 (17%) Query: 170 GGGRG---GRGGGRGGGGRGGGRGGGFRGGRG--GGGGGFRG----GRGGGF 212 GGGRG G GG G GG GG G G GG G GG GGF G G GGF Sbjct: 110 GGGRGMGGGFGGAGGFGGAGGFGGAGGFGGPGGFGGSGGFGGPGSLGSPGGF 161 Score = 39.3 bits (90), Expect = 0.003 Identities = 22/33 (66%), Positives = 23/33 (69%), Gaps = 4/33 (12%) Query: 187 GGRGGGFRGGRGGG-GGGFR--GGRGGGFRGRG 216 GG GGG+ GG GGG GGGF GG G GF GRG Sbjct: 536 GGYGGGYGGGMGGGLGGGFSAGGGSGSGF-GRG 567 Score = 38.1 bits (87), Expect = 0.006 Identities = 23/51 (45%), Positives = 24/51 (47%) Query: 163 GEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFR 213 G G GG GG GG G GG GG G G G G GG GG GG + Sbjct: 121 GAGGFGGAGGFGGAGGFGGPGGFGGSGGFGGPGSLGSPGGFGPGGFPGGIQ 171 Score = 35.4 bits (80), Expect = 0.038 Identities = 21/43 (48%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Query: 25 SSNHFRGGGGGGGGGNFRGGG-RGGFGRGGGRG-GFNKGQDQG 65 S+ GG GGG G GGG GGF GGG G GF +G G Sbjct: 529 STTSASAGGYGGGYGGGMGGGLGGGFSAGGGSGSGFGRGGGGG 571 Score = 35.0 bits (79), Expect = 0.049 Identities = 24/57 (42%), Positives = 25/57 (43%), Gaps = 9/57 (15%) Query: 166 GPPRGGGRGGRGG--GRGGGGRGGGRGG-------GFRGGRGGGGGGFRGGRGGGFR 213 G G GRGG GG G GGG G GG G R G GGG RGG + Sbjct: 559 GSGSGFGRGGGGGIGGGFGGGSSGFSGGSGFGSISGARYGVSGGGFSSASNRGGSIK 615 Score = 32.7 bits (73), Expect = 0.24 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 7/49 (14%) Query: 169 RGGGRGGRGGGRGGGGRGGGRGGGFR-------GGRGGGGGGFRGGRGG 210 R + GG +G GR G R GG GGG GFR G GG Sbjct: 3 RQASKTSGGGSQGFSGRSAVVSGSSRMSCVAHSGGAGGGAYGFRSGAGG 51 Score = 30.8 bits (68), Expect = 0.92 Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 4/47 (8%) Query: 5 GGGRGGFN-RGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFG 50 GGG GF+ R G +R H GG GGG FR G GGFG Sbjct: 10 GGGSQGFSGRSAVVSGSSRMSCVAH--SGGAGGGAYGFRSGA-GGFG 53 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.153 0.498 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,955,221 Number of Sequences: 37866 Number of extensions: 1021761 Number of successful extensions: 56275 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 851 Number of HSP's successfully gapped in prelim test: 324 Number of HSP's that attempted gapping in prelim test: 10077 Number of HSP's gapped (non-prelim): 21947 length of query: 217 length of database: 18,247,518 effective HSP length: 98 effective length of query: 119 effective length of database: 14,536,650 effective search space: 1729861350 effective search space used: 1729861350 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.