Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: KIF5C Sequence: fasta or formatted (957aa) NCBI GI: 4758650
Description:

kinesin family member 5C

Referenced in:

Kinesins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         64           2
 C cysteine            1.0         10           2
 D aspartate           6.1         58           2
 E glutamate          11.5        110           3
 F phenylalanine       1.7         16           1
 G glycine             3.9         37           4
 H histidine           2.4         23           1
 I isoleucine          5.4         52           2
 K lysine              9.9         95           3
 L leucine            10.1         97           4
 M methionine          2.4         23           1
 N asparagine          5.1         49           2
 P proline             2.2         21           2
 Q glutamine           6.4         61           2
 R arginine            5.7         55           2
 S serine              6.5         62           3
 T threonine           5.1         49           3
 V valine              5.4         52           2
 W tryptophan          0.2          2           1
 Y tyrosine            2.2         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kinesin family member 5C 
KIF5A                 0.758   kinesin family member 5A 
KIF5B                 0.753   kinesin family member 5B 
KIF3A                 0.150   kinesin family member 3A 
CENPE                 0.146   centromere protein E 
KIF3B                 0.142   kinesin family member 3B 
KIF4B                 0.141   kinesin family member 4B 
KIF4A                 0.141   kinesin family member 4 
KIF27                 0.140   kinesin family member 27 
KIF21A                0.139   kinesin family member 21A 
KIF15                 0.136   kinesin family member 15 
KIF11                 0.133   kinesin family member 11 
KIF21B                0.132   kinesin family member 21B 
KIF17                 0.128   kinesin family member 17 isoform b 
KIF17                 0.128   kinesin family member 17 isoform a 
KIF16B                0.127   kinesin-like motor protein C20orf23 
KIF13A                0.120   kinesin family member 13A isoform d 
KIF13A                0.120   kinesin family member 13A isoform c 
KIF13A                0.120   kinesin family member 13A isoform b 
KIF13A                0.120   kinesin family member 13A isoform a 
KIF1B                 0.119   kinesin family member 1B isoform alpha 
KIF1B                 0.119   kinesin family member 1B isoform b 
KIF1A                 0.116   axonal transport of synaptic vesicles 
KIF3C                 0.116   kinesin family member 3C 
KIF7                  0.112   kinesin family member 7 
KIF13B                0.111   kinesin family member 13B 
KIF1C                 0.107   kinesin family member 1C 
KIF18A                0.107   kinesin family member 18A 
KIF19                 0.106   kinesin family member 19 
KIF18B                0.105   kinesin family member 18B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press