Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: IL17RE Sequence: fasta or formatted (667aa) NCBI GI: 24430204
Description:

interleukin 17 receptor E isoform 1

Referenced in:

Interleukins and Their Receptors

Other entries for this name:
alt prot [551aa] interleukin 17 receptor E isoform 2
alt mRNA [667aa] interleukin 17 receptor E isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         56           2
 C cysteine            3.3         22           2
 D aspartate           4.5         30           2
 E glutamate           3.9         26           2
 F phenylalanine       3.1         21           1
 G glycine             5.8         39           3
 H histidine           4.2         28           2
 I isoleucine          2.5         17           2
 K lysine              3.0         20           2
 L leucine            15.9        106           4
 M methionine          0.9          6           1
 N asparagine          0.6          4           1
 P proline             7.5         50           3
 Q glutamine           3.9         26           2
 R arginine            9.0         60           2
 S serine              9.1         61           2
 T threonine           4.0         27           1
 V valine              5.4         36           2
 W tryptophan          3.0         20           2
 Y tyrosine            1.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 17 receptor E isoform 1 
IL17RE                1.000   interleukin 17 receptor E isoform 1 
IL17RE                0.818   interleukin 17 receptor E isoform 2 
IL17RC                0.055   interleukin 17 receptor C isoform 1 precursor 
IL17RC                0.055   interleukin 17 receptor C isoform 3 precursor 
IL17RC                0.055   interleukin 17 receptor C isoform 2 precursor 
IL17REL               0.032   interleukin 17 receptor E-like 
IL17RA                0.011   interleukin 17A receptor precursor 
ZNF318                0.007   zinc finger protein 318 
CTF1                  0.007   cardiotrophin 1 isoform 2 
CTF1                  0.007   cardiotrophin 1 isoform 1 
PGR                   0.006   progesterone receptor 
AMH                   0.006   anti-Mullerian hormone 
KIAA1543              0.005   NEZHA isoform 2 
KIAA1543              0.005   NEZHA isoform 1 
JAG2                  0.005   jagged 2 isoform b precursor 
JAG2                  0.005   jagged 2 isoform a precursor 
TMEM25                0.004   transmembrane protein 25 isoform 1 
SREBF1                0.004   sterol regulatory element binding transcription fact...
SREBF1                0.004   sterol regulatory element binding transcription fact...
TMEM25                0.004   transmembrane protein 25 isoform 4 
CD8B                  0.004   CD8b antigen isoform 1 precursor 
CD8B                  0.004   CD8b antigen isoform 5 precursor 
CD8B                  0.004   CD8b antigen isoform 2 precursor 
CD8B                  0.004   CD8b antigen isoform 3 precursor 
KIAA1602              0.004   hypothetical protein LOC57701 
SRCAP                 0.004   Snf2-related CBP activator protein 
B3GNT4                0.004   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
FGD6                  0.004   FYVE, RhoGEF and PH domain containing 6 
IL13                  0.004   interleukin 13 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press