PAIP1 9610

Name: PAIP1	Sequence: fasta or formatted (479aa)		NCBI GI: 17511255
Description: poly(A) binding protein interacting protein 1 isoform 1		Referenced in: Polyadenylation
Other entries for this name: alt prot [400aa] poly(A) binding protein interacting protein 1 isoform 2 alt prot [367aa] poly(A) binding protein interacting protein 1 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 32 2 C cysteine 1.7 8 1 D aspartate 6.3 30 2 E glutamate 9.4 45 2 F phenylalanine 4.0 19 2 G glycine 7.5 36 4 H histidine 1.3 6 2 I isoleucine 2.7 13 2 K lysine 4.0 19 1 L leucine 9.4 45 3 M methionine 2.1 10 1 N asparagine 4.2 20 1 P proline 8.6 41 3 Q glutamine 5.8 28 2 R arginine 6.1 29 1 S serine 6.5 31 3 T threonine 5.0 24 2 V valine 4.6 22 3 W tryptophan 0.4 2 1 Y tyrosine 4.0 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 poly(A) binding protein interacting protein 1 isofor... LOC645139 0.918 PREDICTED: similar to poly(A) binding protein inter... LOC645139 0.913 PREDICTED: similar to poly(A) binding protein inter... LOC645139 0.913 PREDICTED: similar to poly(A) binding protein intera... PAIP1 0.805 poly(A) binding protein interacting protein 1 isofor... PAIP1 0.752 poly(A) binding protein interacting protein 1 isofor... EIF4G1 0.059 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.059 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.059 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.059 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.059 eukaryotic translation initiation factor 4 gamma, 1 ... KIAA0427 0.052 hypothetical protein LOC9811 isoform 2 KIAA0427 0.052 hypothetical protein LOC9811 isoform 1 EIF4G3 0.045 eukaryotic translation initiation factor 4 gamma, 3 ... LMTK3 0.029 lemur tyrosine kinase 3 HCN2 0.023 hyperpolarization activated cyclic nucleotide-gated... PABPN1 0.023 poly(A) binding protein, nuclear 1 PRB1 0.023 proline-rich protein BstNI subfamily 1 isoform 3 pre... PRB2 0.023 proline-rich protein BstNI subfamily 2 SFPQ 0.022 splicing factor proline/glutamine rich (polypyrimidin... PRB1 0.022 proline-rich protein BstNI subfamily 1 isoform 2 pre... PRB3 0.022 proline-rich protein BstNI subfamily 3 precursor [H... PRR12 0.022 proline rich 12 FMNL1 0.021 formin-like 1 HNRNPUL1 0.021 heterogeneous nuclear ribonucleoprotein U-like 1 iso... HNRNPUL1 0.021 heterogeneous nuclear ribonucleoprotein U-like 1 iso... PRR22 0.020 proline rich 22 isoform 1 PRR22 0.020 proline rich 22 isoform 2 CPSF6 0.020 cleavage and polyadenylation specific factor 6, 68 ... PRB1 0.020 proline-rich protein BstNI subfamily 1 isoform 1 pre... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.