TSPAN18 35318

Name: TSPAN18	Sequence: fasta or formatted (267aa)		NCBI GI: 72534746
Description: tetraspanin 18 isoform 1		Referenced in: Integrins
Other entries for this name: alt prot [248aa] tetraspanin 18 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.0 24 2 C cysteine 4.5 12 2 D aspartate 2.6 7 1 E glutamate 6.7 18 3 F phenylalanine 9.4 25 3 G glycine 8.6 23 2 H histidine 0.7 2 1 I isoleucine 5.6 15 2 K lysine 2.2 6 1 L leucine 15.4 41 3 M methionine 2.2 6 1 N asparagine 3.7 10 2 P proline 3.0 8 1 Q glutamine 2.6 7 1 R arginine 4.1 11 2 S serine 4.9 13 1 T threonine 5.6 15 1 V valine 5.6 15 1 W tryptophan 0.7 2 1 Y tyrosine 2.6 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tetraspanin 18 isoform 1 TSPAN18 0.872 tetraspanin 18 isoform 2 TSPAN1 0.198 tetraspan 1 TSPAN9 0.193 tetraspanin 9 TSPAN11 0.191 tetraspanin 11 TSPAN4 0.183 tetraspanin 4 isoform a TSPAN4 0.183 tetraspanin 4 isoform a TSPAN4 0.183 tetraspanin 4 isoform a TSPAN4 0.183 tetraspanin 4 isoform a TSPAN4 0.183 tetraspanin 4 isoform a TSPAN4 0.183 tetraspanin 4 isoform a CD151 0.175 CD151 antigen CD151 0.175 CD151 antigen CD151 0.175 CD151 antigen CD151 0.175 CD151 antigen CD53 0.163 CD53 antigen CD53 0.163 CD53 antigen CD9 0.156 CD9 antigen CD82 0.154 CD82 antigen isoform 1 TSPAN17 0.146 transmembrane 4 superfamily member 17 isoform b [Hom... TSPAN17 0.146 transmembrane 4 superfamily member 17 isoform a [Hom... TSPAN17 0.146 transmembrane 4 superfamily member 17 isoform c [Hom... CD81 0.146 CD81 antigen TSPAN7 0.144 tetraspanin 7 TSPAN14 0.144 tetraspanin 14 isoform 1 TSPAN8 0.142 transmembrane 4 superfamily member 3 TSPAN5 0.140 transmembrane 4 superfamily member 9 CD37 0.138 CD37 antigen isoform A TSPAN6 0.136 transmembrane 4 superfamily member 6 UPK1B 0.132 uroplakin 1B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.