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Search of human proteins with 89941479
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|89941479 hypothetical protein LOC148137 [Homo sapiens]
(425 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|89941479 hypothetical protein LOC148137 [Homo sapiens] 853 0.0
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 60 4e-09
gi|91208420 bassoon protein [Homo sapiens] 58 1e-08
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 58 2e-08
gi|210032580 SET domain containing 1B [Homo sapiens] 57 2e-08
gi|163965366 nascent polypeptide-associated complex alpha subuni... 56 5e-08
gi|66529407 tensin [Homo sapiens] 55 9e-08
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 55 9e-08
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 55 1e-07
gi|110832843 TBP-associated factor 4 [Homo sapiens] 54 3e-07
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens] 54 4e-07
gi|116284392 mucin 2 precursor [Homo sapiens] 53 6e-07
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 52 1e-06
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 52 1e-06
gi|91982772 mucin 17 [Homo sapiens] 51 2e-06
gi|157785645 SPEG complex locus [Homo sapiens] 51 2e-06
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 51 2e-06
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 50 3e-06
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 50 3e-06
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 50 3e-06
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 50 4e-06
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens] 50 5e-06
gi|33946327 nucleoporin 214kDa [Homo sapiens] 49 1e-05
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 49 1e-05
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 49 1e-05
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 49 1e-05
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 49 1e-05
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 48 1e-05
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 48 1e-05
gi|215820635 protein phosphatase 1, regulatory subunit 13 like [... 48 2e-05
>gi|89941479 hypothetical protein LOC148137 [Homo sapiens]
Length = 425
Score = 853 bits (2205), Expect = 0.0
Identities = 425/425 (100%), Positives = 425/425 (100%)
Query: 1 MDRSLPVFSIQDSPFGDAPLGRSHYWPSQSQTWCPKTLSPSRSQRSRLPQAPKALATGPN 60
MDRSLPVFSIQDSPFGDAPLGRSHYWPSQSQTWCPKTLSPSRSQRSRLPQAPKALATGPN
Sbjct: 1 MDRSLPVFSIQDSPFGDAPLGRSHYWPSQSQTWCPKTLSPSRSQRSRLPQAPKALATGPN 60
Query: 61 SPELFEESWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFRQAQPTSREER 120
SPELFEESWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFRQAQPTSREER
Sbjct: 61 SPELFEESWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFRQAQPTSREER 120
Query: 121 QPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIK 180
QPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIK
Sbjct: 121 QPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIK 180
Query: 181 QNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSFPTSSDGLSPFS 240
QNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSFPTSSDGLSPFS
Sbjct: 181 QNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSFPTSSDGLSPFS 240
Query: 241 ETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQ 300
ETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQ
Sbjct: 241 ETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQ 300
Query: 301 GSKGDRAWVPPLTPALRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQ 360
GSKGDRAWVPPLTPALRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQ
Sbjct: 301 GSKGDRAWVPPLTPALRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQ 360
Query: 361 ATTVKASPPAFQVGSPEALAPPPPAADHAPSEALLAQGRPAAAGCRRLRRQRVPGRSRAA 420
ATTVKASPPAFQVGSPEALAPPPPAADHAPSEALLAQGRPAAAGCRRLRRQRVPGRSRAA
Sbjct: 361 ATTVKASPPAFQVGSPEALAPPPPAADHAPSEALLAQGRPAAAGCRRLRRQRVPGRSRAA 420
Query: 421 GAKSP 425
GAKSP
Sbjct: 421 GAKSP 425
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 60.1 bits (144), Expect = 4e-09
Identities = 114/427 (26%), Positives = 154/427 (36%), Gaps = 82/427 (19%)
Query: 27 PSQSQTWCPKTLSPSRSQRSRLP------QAPKALATGPNSPELFEESWPSSSGTPSLP- 79
P + T P TL PS + LP AP +L T P+ P P S TP +
Sbjct: 320 PDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQA 379
Query: 80 --------------STTEGQMWASPAPTLIDSGDSVVA------KYINRF-----RQAQP 114
S T + A P+P + S + + + + F RQ Q
Sbjct: 380 PPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQA 439
Query: 115 TSREERQPAGPTPADFWWLQSDSPDPSS---QSAAAGANKPEGRPHTAVPTAVNVTSASH 171
+ +PA TP D LQ+ P+S Q++ + A P P T P + ASH
Sbjct: 440 SLTSPSRPAS-TPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASH 498
Query: 172 AV-APLQE-IKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSF 229
+ APL I L T +S L SLQ+ A L + + + SL+P T+S
Sbjct: 499 SPQAPLSSLIMPPLETQSS----LAPPSLQTPPASL---TTPPLENLPSLAPPPLQTASA 551
Query: 230 PTSSDGLSPFSETFIPDSSKGLGPRAPASP-------APAQAQTPTPAPAPASSQAPLR- 281
P ++ P ET P +AP SP P+ TP P PA + PL+
Sbjct: 552 PLTT----PHLET--PPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQG 605
Query: 282 -------PEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKAL------ 328
P Q L Q A PPL+P ++ A A+
Sbjct: 606 LPSPPLSPLATPPPQAPPXLALPPLQAPPSPPA-SPPLSPLATPSPQAPNALAVHLLQAP 664
Query: 329 ------PPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQVGSPEALAP- 381
PP + SP A + P S A V SPPA SP A P
Sbjct: 665 FSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP 724
Query: 382 --PPPAA 386
PPP A
Sbjct: 725 QAPPPLA 731
Score = 40.0 bits (92), Expect = 0.004
Identities = 94/397 (23%), Positives = 128/397 (32%), Gaps = 52/397 (13%)
Query: 49 PQAPKALA--------TGPNSPELFEESWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDS 100
PQAP ALA + P SP + P +S P PS T S AP + +
Sbjct: 650 PQAPNALAVHLLQAPFSPPPSPPVQAPFSPPAS-PPVSPSATP----PSQAPPSLAAPPL 704
Query: 101 VVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAV 160
V P++ P P P LQ P+S + A P P
Sbjct: 705 QVPPSPPASPPMSPSATPP--PQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLA 762
Query: 161 PTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLS 220
+ V + A P+ + + +L +L S A ++ S S+S +S
Sbjct: 763 APPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMS 822
Query: 221 PSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAP---------AQAQTPTPAP 271
P P P S PR P +P P A P P P
Sbjct: 823 PLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPP 882
Query: 272 APASSQAPLRPEDDILYQWRQRRKLEQA-----QGSKGDRAWVPPLTPALRTLAESLKAK 326
P+ S + D+ + G +G A PP L
Sbjct: 883 PPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELA--------- 933
Query: 327 ALPPAAGSVIRKSEATP-----SPGACLQPEVPLSPAEQATTVKASPPAFQVGSPEALAP 381
A PAA S + A P +PGA L P PA + ++ PE+ P
Sbjct: 934 ACHPAAWS---RGPAPPLAFRGAPGAPL----PWPPATGPGSADGLCTIYETEGPESATP 986
Query: 382 PPPAADHAPSEALLAQGRPAAAGCRRLRRQRVPGRSR 418
P A D PS G AAAG R P ++R
Sbjct: 987 APGALDPGPSPG--TSGGKAAAGAGAGASSRSPKQAR 1021
Score = 36.6 bits (83), Expect = 0.044
Identities = 86/381 (22%), Positives = 123/381 (32%), Gaps = 85/381 (22%)
Query: 40 PSRSQ--RSRLPQA-PKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMWASPAPT--L 94
P+RS SR P + P A G +P +S G S P G P L
Sbjct: 79 PTRSAGTSSRNPASRPPASGRGERAPPAKN----TSPGPVSSPGRASGTTRPGPLGQKGL 134
Query: 95 IDSGDSVVA--KYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKP 152
S + VA K +++ ++ R +GPTP + SP + +S AAG
Sbjct: 135 RISAEETVARGKATEAPKRSALSAGARRDTSGPTPG------TPSPAMARRSRAAGTEVG 188
Query: 153 EGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKAS 212
RP + +V+ E + + LQ A+R L S
Sbjct: 189 LPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATP 248
Query: 213 ISSSSSLSPSDASTSSFPT------------------------SSDGLSPFSETFIPDSS 248
+SS + PS T P ++ L P S + + S
Sbjct: 249 LSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPS 308
Query: 249 KGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAW 308
G +A P P A TP PA P S PL A
Sbjct: 309 PS-GTKARPVPPPDNAATPLPATLPPS--PPL--------------------------AT 339
Query: 309 VPPLTPALRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASP 368
PL P + SL+ PPA +P + P + P + +++ P
Sbjct: 340 PLPLAPPSPSAPPSLQTLPSPPA------------TPPSQAPPSMTTPPMQAPPSLQTIP 387
Query: 369 P---AFQVGSPEALAPPPPAA 386
P + SP APP P A
Sbjct: 388 PIQVPHSLTSPSLQAPPSPLA 408
Score = 35.0 bits (79), Expect = 0.13
Identities = 54/197 (27%), Positives = 72/197 (36%), Gaps = 53/197 (26%)
Query: 207 KRSKASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQT 266
++S +S S S+ PS A+ P++ GL + + S+ L +PA P+ T
Sbjct: 206 RKSVSSASEHSTTEPSPAARRR-PSAGGGLQRPASRSLSSSATPLS--SPARSGPSARGT 262
Query: 267 PTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPP-LTPALRTLAESLKA 325
P APA S P KG +A PP +TP + A
Sbjct: 263 PR-APAHPSQPKP-----------------------KGLQALRPPQVTPPRKDAA----- 293
Query: 326 KALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQVGSPEALAPPPPA 385
PA G + ATPSP VP P + A T P L P PP
Sbjct: 294 ----PALGPLSSSPLATPSPSGTKARPVP--PPDNAATPL----------PATLPPSPPL 337
Query: 386 ADHAPSEALLAQGRPAA 402
A P LA P+A
Sbjct: 338 ATPLP----LAPPSPSA 350
Score = 31.2 bits (69), Expect = 1.9
Identities = 57/230 (24%), Positives = 79/230 (34%), Gaps = 59/230 (25%)
Query: 245 PDSSKGLGPRAPASPAPAQAQ----------TPTPAPAPASSQAPLRPEDDILYQWRQRR 294
P S G R PAS PA + +P P +P + RP L Q R
Sbjct: 79 PTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGP--LGQKGLRI 136
Query: 295 KLEQ----------------AQGSKGDRAWVPPLTP----ALRTLAESLK---------A 325
E+ + G++ D + P TP A R+ A + A
Sbjct: 137 SAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSA 196
Query: 326 KALPPAAG------SVIRKSEATPSPGACLQPEVP---LSPAEQATTVKASPPAFQVGSP 376
+ PP G S S PSP A +P PA ++ + A+P + SP
Sbjct: 197 RPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATP----LSSP 252
Query: 377 EALAPPPPAADHAPSEALLAQGRPAAAGCRRLRRQRV-PGRSRAAGAKSP 425
P AP+ +P G + LR +V P R AA A P
Sbjct: 253 ARSGPSARGTPRAPAH----PSQPKPKGLQALRPPQVTPPRKDAAPALGP 298
Score = 29.3 bits (64), Expect = 7.1
Identities = 47/187 (25%), Positives = 63/187 (33%), Gaps = 39/187 (20%)
Query: 251 LGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRA--- 307
L PR P SP P TP ++ A R+ L + G G
Sbjct: 25 LTPRPPGSPRPPPPVTPAALRVLGAAGAV------------GRKPLAERAGGIGGATIPE 72
Query: 308 WVPPLTPALRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKAS 367
P P S + PPA+G + E P P P SP + T +
Sbjct: 73 SAPRAGPTRSAGTSSRNPASRPPASG----RGERAP-PAKNTSPGPVSSPGRASGTTRPG 127
Query: 368 P---PAFQVGSPEALAPPPPAADHAPSEALLAQGRPAAAGCRRLRRQRVPG--------R 416
P ++ + E +A A AP + L +AG RR PG R
Sbjct: 128 PLGQKGLRISAEETVA--RGKATEAPKRSAL------SAGARRDTSGPTPGTPSPAMARR 179
Query: 417 SRAAGAK 423
SRAAG +
Sbjct: 180 SRAAGTE 186
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 58.2 bits (139), Expect = 1e-08
Identities = 102/386 (26%), Positives = 144/386 (37%), Gaps = 61/386 (15%)
Query: 73 SGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFRQAQPTSREERQP-------AGP 125
+G P P T+ Q+ A + + S DS + I R Q ++E + P A P
Sbjct: 1304 NGGPLTPGTSPTQLAAPVSFSTPTSSDSSGGRVIPDVRVTQHFAKETQDPLKLHSSPASP 1363
Query: 126 TPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHT 185
+ A S P + + A A P G P + T + + + +P H+
Sbjct: 1364 SSASKEIGMPFSQGPGTPATTAVAPCPAGLPRGYM-TPASPAGSERSPSPSSTAHSYGHS 1422
Query: 186 WNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDAST-------SSFPTSSDGLSP 238
++ +T L + L +A+ S S + T S F +SS LSP
Sbjct: 1423 PTTANYGSQTEDLPQAPSGLAAAGRAAREKPLSASDGEGGTPQPSRAYSYFASSSPPLSP 1482
Query: 239 FSETFIPDSSKG-LGPRAPASPAPAQAQTPTPAPAPASS--QAPLRPEDDILYQWRQRRK 295
S + P S G +GPRA A + T TP+PAPAS ++P P +
Sbjct: 1483 SSPSESPTFSPGKMGPRATA-----EFSTQTPSPAPASDMPRSPGAPTPSPMV------- 1530
Query: 296 LEQAQGSKGDRAWVPPLTPALRTLAESLKAK----ALPPAAGSVIRKSEATPSPGACLQP 351
AQG++ P TP L S +A L A S R A+ S
Sbjct: 1531 ---AQGTQTPHR---PSTPRLVWQESSQEAPFMVITLASDASSQTRMVHASASTS----- 1579
Query: 352 EVPL-SPAEQATTV----KASPPAFQVGSPEALAPPPPAADHAPSE------ALLAQGRP 400
PL SP E T + +PP+ PE P PP PS AL G
Sbjct: 1580 --PLCSPTETQPTTHGYSQTTPPSVSQLPPE--PPGPPGFPRVPSAGADGPLALYGWGAL 1635
Query: 401 AAAGCRRLRRQRVPGRSRA-AGAKSP 425
A R VPG SR G ++P
Sbjct: 1636 PAENISLCRISSVPGTSRVEPGPRTP 1661
Score = 37.0 bits (84), Expect = 0.034
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 325 AKALPPAAGSV-IRKSEATPSPGAC--LQPEVPLSPAEQ----ATTVKASPPAFQVGSPE 377
A ++PPA G V + K A +PGA +PE+P+ A + TT A A +P
Sbjct: 2270 ASSVPPAEGPVYLGKPAAAKAPGAGGPSRPEMPVGAAREEPLPTTTPAAIKEAAGAPAPA 2329
Query: 378 ALAPPPPAADHAPSEALLAQGRP 400
LA P AD AP A RP
Sbjct: 2330 PLAGQKPPADAAPGGGSGALSRP 2352
Score = 35.4 bits (80), Expect = 0.099
Identities = 70/269 (26%), Positives = 92/269 (34%), Gaps = 51/269 (18%)
Query: 27 PSQSQTWCPKTLSPSR----SQRSRLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTT 82
PS S T SP+ SQ LPQAP LA + E+ +S G P +
Sbjct: 1410 PSPSSTAHSYGHSPTTANYGSQTEDLPQAPSGLAAAGRAAR--EKPLSASDGEGGTPQPS 1467
Query: 83 EG-QMWASPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPS 141
+AS +P L S S + + T+ Q P PA +P PS
Sbjct: 1468 RAYSYFASSSPPLSPSSPSESPTFSPGKMGPRATAEFSTQTPSPAPASDMPRSPGAPTPS 1527
Query: 142 SQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSR 201
A G P RP T P V S+ A ++L S
Sbjct: 1528 PM-VAQGTQTPH-RPST--PRLVWQESSQEA-------------------PFMVITLASD 1564
Query: 202 AARLLKRSKASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAP 261
A+ + AS S+S SP T + PT+ +S+T P S L P P P
Sbjct: 1565 ASSQTRMVHASASTSPLCSP----TETQPTTHG----YSQT-TPPSVSQLPPEPPGPPG- 1614
Query: 262 AQAQTPTPAPAPASSQAPLRPEDDILYQW 290
P A + PL LY W
Sbjct: 1615 ------FPRVPSAGADGPL-----ALYGW 1632
Score = 35.0 bits (79), Expect = 0.13
Identities = 66/294 (22%), Positives = 109/294 (37%), Gaps = 39/294 (13%)
Query: 35 PKTLSPSRSQRSRLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMWASPAPTL 94
P L P SQ+ + +A T P ++ P G PS P + ++ A L
Sbjct: 528 PTPLPPPTSQQPPVGAPHRASGTSP-----LKQKGPQGLGQPSGPLPAKASPLSTKASPL 582
Query: 95 IDSGDSVVAKYINRFRQAQ-PTSREERQPAGPTPADFWWLQ--SDSPDPSSQSAAAGANK 151
S S AK + ++ P+S +E++ PT A+ +P P++ +G +
Sbjct: 583 -PSKASPQAKPLRASEPSKTPSSVQEKKTRVPTKAEPMPKPPPETTPTPATPKVKSGVRR 641
Query: 152 PEGRPHT----AVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLE-----TLSLQSRA 202
E P T AVP A A V + Q+ SL D S QS
Sbjct: 642 AE--PATPVVKAVPEAPKGGEAEDLVG--KPYSQDASRSPQSLSDTGYSSDGISSSQSEI 697
Query: 203 ARLLKRSKASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPA 262
++++ + S+ P S S + P + ++GL P + P +
Sbjct: 698 TGVVQQEVEQLDSAGVTGPHPPSPSEIHKVGSSMRPLLQ------AQGLAPSERSKPLSS 751
Query: 263 -----QAQTP-----TPAPAPASSQAP-LRPEDDILYQWRQRRKLEQAQGSKGD 305
Q Q P TP + + + ED+ +WR+RR+ + S D
Sbjct: 752 GTGEEQKQRPHSLSITPEAFDSDEELEDILEEDEDSAEWRRRREQQDTAESSDD 805
Score = 32.0 bits (71), Expect = 1.1
Identities = 48/174 (27%), Positives = 62/174 (35%), Gaps = 45/174 (25%)
Query: 251 LGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVP 310
LG P P P Q P AP AS +PL K + QG +P
Sbjct: 525 LGEPTPLPP-PTSQQPPVGAPHRASGTSPL--------------KQKGPQGLGQPSGPLP 569
Query: 311 PLTPALRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQ----------------PEVP 354
L T A L +KA P A +R SE + +P + + PE
Sbjct: 570 AKASPLSTKASPLPSKASPQA--KPLRASEPSKTPSSVQEKKTRVPTKAEPMPKPPPETT 627
Query: 355 LSP-----------AEQAT-TVKASPPAFQVGSPEALAPPPPAADHAPSEALLA 396
+P AE AT VKA P A + G E L P + D + S L+
Sbjct: 628 PTPATPKVKSGVRRAEPATPVVKAVPEAPKGGEAEDLVGKPYSQDASRSPQSLS 681
Score = 32.0 bits (71), Expect = 1.1
Identities = 56/240 (23%), Positives = 91/240 (37%), Gaps = 34/240 (14%)
Query: 50 QAPKALATGPNSPELFEESWPSSS------GTPSLPSTTEGQMWASPAPTLIDSGDSVVA 103
+A K A E S PSS+ G P PS+ E ++ P+
Sbjct: 3665 RAAKPHARDLGRHEARPHSQPSSAPAMPKKGQPGYPSSAE---YSQPS------------ 3709
Query: 104 KYINRFRQAQPTSREERQP-AGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPT 162
+ + + A + + RQ +GP LQS + +P +Q G G + P+
Sbjct: 3710 RASSAYHHASDSKKGSRQAHSGPAA-----LQSKA-EPQAQPQLQGRQAAPGPQQSQSPS 3763
Query: 163 AVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPS 222
+ + S + + P + +Q L LQ ++ + S + S +
Sbjct: 3764 SRQIPSGAASRQPQTQQQQQGLGLQPPQQALTQARLQQQSQPTTRGSAPAASQPAGKPQP 3823
Query: 223 DASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRP 282
ST++ P + P +E + SKG +AP QAQ P P P PA +A RP
Sbjct: 3824 GPSTATGPQPAG--PPRAEQ--TNGSKGTA-KAPQQGRAPQAQ-PAPGPGPAGVKAGARP 3877
Score = 30.8 bits (68), Expect = 2.4
Identities = 32/128 (25%), Positives = 46/128 (35%), Gaps = 7/128 (5%)
Query: 230 PTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTP---APAPASSQAPLRPEDDI 286
P G P S + D + LG + ASP P QA TP +P +Q P E D
Sbjct: 65 PGPGPGPGPGSTSRRLDPKEPLGNQRAASPTPKQASATTPGHESPRETRAQGPAGQEADG 124
Query: 287 LYQWRQRRKLEQAQGS----KGDRAWVPPLTPALRTLAESLKAKALPPAAGSVIRKSEAT 342
+ Q Q G DR P ++ +A + P S + + +
Sbjct: 125 PRRTLQVDSRTQRSGRSPSVSPDRGSTPTSPYSVPQIAPLPSSTLCPICKTSDLTSTPSQ 184
Query: 343 PSPGACLQ 350
P+ C Q
Sbjct: 185 PNFNTCTQ 192
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 57.8 bits (138), Expect = 2e-08
Identities = 94/422 (22%), Positives = 149/422 (35%), Gaps = 100/422 (23%)
Query: 38 LSPSRSQRSRLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMWASPAPTLIDS 97
LS + R+P + +G SP L + + S PS PS + +P+P+
Sbjct: 2375 LSGANLTSPRVPLSAYERVSGRTSPPLLDRA--RSRTPPSAPSQSRMTSERAPSPS---- 2428
Query: 98 GDSVVAKYINRFRQAQPTSR---EERQPAGPTPADF-----WWLQSDSPDPSSQSAAAGA 149
+R QA S + QP P P+ F + +P SQS ++GA
Sbjct: 2429 ---------SRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGA 2479
Query: 150 NKPE----------------GRPHTAV--PTAVNVTSASHAVAPLQEIKQNLHTWNSSLL 191
G PH+ V P A A+A LQ K+
Sbjct: 2480 VATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKE---------- 2529
Query: 192 DLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGL 251
+RS +S SSSSS S S +S+SS +SS S SE
Sbjct: 2530 ---------------RRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSE---------- 2564
Query: 252 GPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPP 311
G P P A + P+P PAP + RP + + ++R + S
Sbjct: 2565 GSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSS------ 2618
Query: 312 LTPALRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAF 371
+ + + + S + + ++ S S ++PSP P QA ASP
Sbjct: 2619 -SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPA---------KPGPQALPKPASPKKP 2668
Query: 372 QVGSPEALAPPPP--------AADHAPSEALLAQGRPAAAGCRRLRRQRVPGRSRAAGAK 423
G + +P P + ++P E +P+ + +R R + ++
Sbjct: 2669 PPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQRGDSR 2728
Query: 424 SP 425
SP
Sbjct: 2729 SP 2730
Score = 55.5 bits (132), Expect = 9e-08
Identities = 76/301 (25%), Positives = 116/301 (38%), Gaps = 45/301 (14%)
Query: 4 SLPVFSIQDSPFGDAPLGRSHYWPSQSQTWCPKTLSPSRSQRSRLPQAPKALATGPNSPE 63
S P S S +P R PSQS L P++ Q P++P A S
Sbjct: 2412 SAPSQSRMTSERAPSPSSRMGQAPSQS------LLPPAQDQ----PRSPVPSAFSDQSRC 2461
Query: 64 LFEESWPS------SSGTPSLPSTTEGQ---MWASPAPTL--IDSGD---SVVAKYINRF 109
L ++ P SSG + +++ G M + PAP + D G+ S A+ +
Sbjct: 2462 LIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSAL 2521
Query: 110 RQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSA 169
QP ++E R + + + S S SS S+ + ++ EG P
Sbjct: 2522 AALQP-AKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVP 2580
Query: 170 SHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSF 229
S AP + +++ + KR + S SSSSS S S +S+SS
Sbjct: 2581 SPTPAPKEAVREG----------------RPPEPTPAKRKRRSSSSSSSSSSSSSSSSSS 2624
Query: 230 PTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPT----PAPAPASSQAPLRPEDD 285
+SS S S + SS +PA P P P P P S++P +P D
Sbjct: 2625 SSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDS 2684
Query: 286 I 286
+
Sbjct: 2685 L 2685
Score = 42.0 bits (97), Expect = 0.001
Identities = 77/355 (21%), Positives = 131/355 (36%), Gaps = 54/355 (15%)
Query: 113 QPTSREERQPAGPTPADFWWLQ--SDSPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSAS 170
Q +RE +QPA P + ++ S S P+ + K GR S+S
Sbjct: 154 QRRAREAKQPAPEPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGR---------RSESSS 204
Query: 171 HAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSP--------- 221
+ K+ H S + S ++ R K K S S++ +P
Sbjct: 205 PRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRST 264
Query: 222 -SDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPL 280
+D+++SS + S S ++T + G P +PAS + P P S+Q P
Sbjct: 265 SADSASSSDTSRSRSRSAAAKTHTT-ALAGRSP-SPASGRRGEGDAPFSEPGTTSTQRPS 322
Query: 281 RPE-----DDILYQWRQRRKLEQA---QGSKGDRAWVPPLTPALRTLAESLKAKALPPAA 332
PE Y+ + + K E++ +R+ P PA L + P A
Sbjct: 323 SPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLA 382
Query: 333 GSVIRKSEATP----SPGACLQPEVPLSPAEQATTVKASPPAFQ--------VGSPEALA 380
+ + + P SP P Q+++ ++SPP+ Q SPE+
Sbjct: 383 TTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPK 442
Query: 381 PPPPAADH-----APSEALLAQGRP------AAAGCRRLRRQRVPGRSRAAGAKS 424
P P H +P+ + GR + RR+ R R P ++ ++S
Sbjct: 443 PAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRS 497
Score = 40.8 bits (94), Expect = 0.002
Identities = 100/420 (23%), Positives = 152/420 (36%), Gaps = 88/420 (20%)
Query: 38 LSPSRSQRSRLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMWASPAPTLIDS 97
L+ R RSR P+ + + SP S+SG+ S S + A+P T S
Sbjct: 2048 LAIRRRSRSRTPRTARGKRSLTRSPPAIRRR--SASGSSSDRSRS-----ATPPATRNHS 2100
Query: 98 GDSVVAKYINRFRQA-------QPTSREE------RQPAGPTPADFWWLQS------DSP 138
G +N R + PT + +P G + LQ D P
Sbjct: 2101 GSRTPPVALNSSRMSCFSRPSMSPTPLDRCRSPGMLEPLGSSRTPMSVLQQAGGSMMDGP 2160
Query: 139 DPSSQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSS------LLD 192
P + PE + + A+ S A P L S L+
Sbjct: 2161 GPRIPDHQR-TSVPENHAQSRIALALTAISLGTARPPPSMSAAGLAARMSQVPAPVPLMS 2219
Query: 193 LETLSLQSRAARLLKRSKASISSSSSLSPS--------DASTSSFPTSSDGLSPFSETFI 244
L T + A+R+ S A+++ +S+ +P+ D+ T + + + SP T +
Sbjct: 2220 LRTAPAANLASRIPAASAAAMNLASARTPAIPTAVNLADSRTPAAAAAMNLASP--RTAV 2277
Query: 245 PDSSKGLG-PRAPASPAP--AQAQT---------------PTPAPAPASSQAPLRPEDDI 286
S+ L PR P +PA A A+T PT A P+SS+ P P
Sbjct: 2278 APSAVNLADPRTPTAPAVNLAGARTPAALAALSLTGSGTPPTAANYPSSSRTPQAPASAN 2337
Query: 287 LYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKALPPAAGSVIRKSEATPSPG 346
L G + A P +A S A AL PA+ + R + A S
Sbjct: 2338 LV------------GPRSAHATAPV------NIAGSRTAAALAPASLTSARMAPAL-SGA 2378
Query: 347 ACLQPEVPLSPAEQATTVKASPPAFQVGSPEALAPPPPAADHAPSEALLAQGRPAAAGCR 406
P VPLS E+ + + SPP A + PP+ APS++ + R + R
Sbjct: 2379 NLTSPRVPLSAYERVSG-RTSPPLLD----RARSRTPPS---APSQSRMTSERAPSPSSR 2430
Score = 35.8 bits (81), Expect = 0.076
Identities = 52/273 (19%), Positives = 87/273 (31%), Gaps = 6/273 (2%)
Query: 23 SHYWPSQSQTWCPKTLSPSRSQRSRLPQAPKALATGPNSPELF--EESWPSSSGTPSLPS 80
SH S T P +S + PK A P P L + P SL
Sbjct: 968 SHSGSSSPDTKVKPETPPRQSHSGSISPYPKVKAQTPPGPSLSGSKSPCPQEKSKDSLVQ 1027
Query: 81 TTEGQM-WASPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPD 139
+ G + + + G+S + + TS + R +S S
Sbjct: 1028 SCPGSLSLCAGVKSSTPPGESYFGVSSLQLKGQSQTSPDHRSDTSSPEVRQSHSESPSLQ 1087
Query: 140 PSSQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQ 199
SQ++ G P T + + + + +K + S +
Sbjct: 1088 SKSQTSPKGGRSRSSSPVTELASRSPIRQDRGEFSASPMLKSGMSPEQSRFQSDSSSYPT 1147
Query: 200 SRAARLLKRSKASISSSS---SLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAP 256
+ LL +S+ + S +L P + +T+S P D SPF P+SS
Sbjct: 1148 VDSNSLLGQSRLETAESKEKMALPPQEDATASPPRQKDKFSPFPVQDRPESSLVFKDTLR 1207
Query: 257 ASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQ 289
P +P +S P +D+ L +
Sbjct: 1208 TPPRERSGAGSSPETKEQNSALPTSSQDEELME 1240
Score = 35.0 bits (79), Expect = 0.13
Identities = 70/330 (21%), Positives = 125/330 (37%), Gaps = 48/330 (14%)
Query: 27 PSQSQTWCPKTLSPSRSQRSRLPQAPKALATGPNSPELFEESW-PSSSGTPSLPSTTEGQ 85
PS+ ++ C + P LPQ P+ + P+SPEL + P + S S +
Sbjct: 1473 PSRGRSECDSSPEPKA-----LPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKT 1527
Query: 86 MWASPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSA 145
+ +P SG S + ++ A P R E + + A + P Q +
Sbjct: 1528 VARTPLGQRSRSGSS---QELDVKPSASPQERSESDSSPDSKAK-------TRTPLRQRS 1577
Query: 146 AAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARL 205
+G++ PE + + + + +S V + + S + ++ A R
Sbjct: 1578 RSGSS-PEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDS-----SPEPKAPAPRA 1631
Query: 206 LKRSKASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQ 265
L R S SSS PS +SS +S + P S+ + +SP P + +
Sbjct: 1632 LPRRSRSGSSSKGRGPSPEGSSSTESSPEH---------PPKSRTARRGSRSSPEP-KTK 1681
Query: 266 TPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPL----------TPA 315
+ TP +S +P ++ + R R+ A S R+ PP PA
Sbjct: 1682 SRTPPRRRSSRSSP-----ELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPA 1736
Query: 316 LRTLAESLKAKALPPAAGSVIRKSEATPSP 345
++ + + A P + R+ +PSP
Sbjct: 1737 EKSRSSRRRRSASSPRTKTTSRRGR-SPSP 1765
Score = 32.3 bits (72), Expect = 0.84
Identities = 51/275 (18%), Positives = 96/275 (34%), Gaps = 37/275 (13%)
Query: 154 GRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASI 213
GR H+ P + +S Q NSS +++ + SR +R L ++
Sbjct: 711 GRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSP-EMKKSRISSRRSRSLSSPRSKA 769
Query: 214 SSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAP 273
S SL S + +S P P S P+A + P ++++ + P
Sbjct: 770 KSRLSLRRSLSGSSPCPKQKSQTPPRRSR-----SGSSQPKAKSRTPPRRSRSSSSPPPK 824
Query: 274 ASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKALPPAAG 333
S+ P R Q+ S V TP + S +A
Sbjct: 825 QKSKTPSR----------------QSHSSSSPHPKVKSGTPPRQGSITSPQAN------- 861
Query: 334 SVIRKSEATPSPGACLQ----PEVPLSPAEQATTVKASPPAFQVGSPEALAPPPPAADHA 389
+ TP +C + PE+ + + +SPP + +P +P ++
Sbjct: 862 ----EQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQSPSRSSSPQP 917
Query: 390 PSEALLAQGRPAAAGCRRLRRQRVPGRSRAAGAKS 424
+A+++ + + +G RV R+ ++S
Sbjct: 918 KVKAIISPRQRSHSGSSSPSPSRVTSRTTPRRSRS 952
Score = 31.6 bits (70), Expect = 1.4
Identities = 70/274 (25%), Positives = 103/274 (37%), Gaps = 63/274 (22%)
Query: 34 CPKTLSPSRSQRSRLPQA-PKALATGPNSPELFEESWP--SSSGTPSLPSTTEGQMWASP 90
CPK S + +RSR + PKA + P S P S TPS S + +SP
Sbjct: 785 CPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSS----SSP 840
Query: 91 APTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGAN 150
P + SG RQ TS + + + TP +S SPDP +S +
Sbjct: 841 HPK-VKSGTPP--------RQGSITSPQANEQS-VTPQRRSCFES-SPDPELKSRTPSRH 889
Query: 151 KPEGRPHTAVPTAVNVT-SASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRS 209
G V ++ S S + +P ++K ++
Sbjct: 890 SCSGSSPPRVKSSTPPRQSPSRSSSPQPKVKA-----------------------IISPR 926
Query: 210 KASISSSSSLSPSDASTSSFPTSSDGLSPFSET---FIPDSSKG--------LGPRAP-- 256
+ S S SSS SPS ++ + P S +SP S +P S + P P
Sbjct: 927 QRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPR 986
Query: 257 ------ASPAP-AQAQTPTPAPAPASSQAPLRPE 283
SP P +AQTP P P+ + S++P E
Sbjct: 987 QSHSGSISPYPKVKAQTP-PGPSLSGSKSPCPQE 1019
Score = 29.3 bits (64), Expect = 7.1
Identities = 60/257 (23%), Positives = 94/257 (36%), Gaps = 43/257 (16%)
Query: 35 PKTLSPSRSQRSRLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMWASPAPTL 94
P+ L+ + + + +A T SP E P SS + S P SP PT
Sbjct: 378 PQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSP--------PSPQPTK 429
Query: 95 IDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEG 154
+ S +S E +PA P P + S P+S++ + G K +
Sbjct: 430 VSRHAS--------------SSPESPKPA-PAPGSH---REISSSPTSKNRSHGRAKRD- 470
Query: 155 RPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASIS 214
+ H+ P+ S S A A + T +SR+A+ RS++
Sbjct: 471 KSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQR 530
Query: 215 SSSSLSPSDASTS-SFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTP------ 267
S SP S S T G S + S R+PA+ ++++TP
Sbjct: 531 RGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHS------RSPATRGRSRSRTPARRGRS 584
Query: 268 ---TPAPAPASSQAPLR 281
TPA + S+ P R
Sbjct: 585 RSRTPARRRSRSRTPTR 601
Score = 28.9 bits (63), Expect = 9.3
Identities = 42/196 (21%), Positives = 72/196 (36%), Gaps = 23/196 (11%)
Query: 225 STSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPED 284
S SS + +P + SS+ L + ASP +P + A ++ PLR
Sbjct: 1519 SESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQERSESDSSP-DSKAKTRTPLR--- 1574
Query: 285 DILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKALPPAAGSVIRKSEATPS 344
QR + GS + L+P S + K P AA S+++P
Sbjct: 1575 -------QRSR----SGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPE 1623
Query: 345 PGACLQPEVPLSPAEQATTVKASPPAFQVGSPEALAPPPPAADHAPSEALLAQGRPAAAG 404
P A +P +++ P SPE + + +H P +G ++
Sbjct: 1624 PKAPAPRALPRRSRSGSSSKGRGP------SPEGSSSTESSPEHPPKSRTARRGSRSSPE 1677
Query: 405 CRRLRRQRVPGRSRAA 420
+ + R P R R++
Sbjct: 1678 PK--TKSRTPPRRRSS 1691
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 57.4 bits (137), Expect = 2e-08
Identities = 97/351 (27%), Positives = 134/351 (38%), Gaps = 81/351 (23%)
Query: 96 DSGDSVVAKYINRFRQAQPTSREER-QPAGPTPAD-----------FWWLQS--DSPD-P 140
DSG+ A A+P ++E+ P GP P D F W DSP P
Sbjct: 424 DSGEFRRAPAPPPLPPAEPLAKEKPGTPPGPPPPDTNSMELGGRPTFGWSPEPCDSPGTP 483
Query: 141 SSQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQS 200
+ +S+ AG KP H ++ + + + L+E + L D E
Sbjct: 484 TLESSPAGPEKP----HDSLDSRIEML--------LKEQRTKLLFLREPDSDTE------ 525
Query: 201 RAARLLKRSKASISSSSS-LSP-SDASTSSFP-----------TSSDGLSPFSETFIPDS 247
L+ + ISSSSS LSP + T+S P SS GL S T +PDS
Sbjct: 526 -----LQMEGSPISSSSSQLSPLAPFGTNSQPGFRGPTPPSSRPSSTGLEDISPTPLPDS 580
Query: 248 SK------GLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQG 301
+ GLGPR P P P P PA SQ D + + K+++ Q
Sbjct: 581 DEDEELDLGLGPRPPPEPGP-------PDPAGLLSQTAEVALDLVGDRTPTSEKMDEGQQ 633
Query: 302 SKGDRAWV--PPLTPALRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAE 359
S G+ + + A T A+ K + P A +V A PS L P +PL P
Sbjct: 634 SSGEDMEISDDEMPSAPITSADCPKPMVVTPGAAAV-----AAPS---VLAPTLPLPPPP 685
Query: 360 QATTVKASP------PAFQVGSPEALAPPPPAADHAPSEALLAQGRPAAAG 404
+ P P F + P PPPP H P+ + PA G
Sbjct: 686 GFPPLPPPPPPPPPQPGFPMPPPLPPPPPPPPPAH-PAVTVPPPPLPAPPG 735
Score = 29.3 bits (64), Expect = 7.1
Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 9/80 (11%)
Query: 211 ASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPA 270
A++ L P T FP++ D P + T + G AP P P Q P P
Sbjct: 1500 AALGRELLLLPGQPQTPVFPSTHD---PRTVTL---DFRNAGIPAPPPPLPPQPPPPPPP 1553
Query: 271 PAPASSQAPLRPEDDILYQW 290
P ++ P + D+ QW
Sbjct: 1554 PPVEPTKLPFKELDN---QW 1570
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 56.2 bits (134), Expect = 5e-08
Identities = 116/459 (25%), Positives = 161/459 (35%), Gaps = 96/459 (20%)
Query: 13 SPF--GDAPLGRSHYWPSQSQTWCPKTLSPSRSQRSRLPQAPK----ALATGPNSPELFE 66
SPF G L ++ P + T L P+ S+ + +P+ LAT +PE+
Sbjct: 674 SPFLEGTVSLAPKNH-PVKEGTLTTLPLVPTASENCPVAPSPQNTCAPLATLVLAPEI-- 730
Query: 67 ESWPSSSGTPSLPSTTEGQMWASPAPTLID--SGDSVVAKYINRFRQAQPTSREERQPAG 124
P S +PSLP P +D S S +A + ++ PT
Sbjct: 731 ---PKSVPSPSLPPAG-----TPPGTKKVDGISHTSALAPVASSPKEC-PTEDSGASATA 781
Query: 125 PTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLH 184
+ +L +DSP P S + +P + +A P + + S V+P++
Sbjct: 782 SSKGTLTYL-ADSPSPLGVSVSPQTKRPPTKKGSAGPDTP-IGNLSSPVSPVE------- 832
Query: 185 TWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSF--PTSSDGLS-PFSE 241
+S L +LS Q K S A+ S + SP A T S P S G++ P E
Sbjct: 833 ---ASFLPENSLSFQGS-----KDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKE 884
Query: 242 TFIPD-------------------------SSKGLGPRA-------PASPAPAQAQTPTP 269
T P SS RA PASP+P A TP
Sbjct: 885 TPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPA 944
Query: 270 APAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKALP 329
A P+ P P +W KG P TP S K P
Sbjct: 945 ATPPSPKGGPATPSP----KWAPTPPAATPPSPKGG-----PATP-------SPKGAPTP 988
Query: 330 PAAGSVIRK-SEATPSPGACLQPEVPLSPAEQATTVKASPPA--FQVGSPEALAPPPPAA 386
PAA K ATPSP P PA + K SP A F G+ A PP+
Sbjct: 989 PAATPPSPKGGPATPSPKG-----APTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSP 1043
Query: 387 DHAPSEALLAQGRPAAAGCRRLRRQRVPGRSRAAGAKSP 425
+P+ L +G P + P GA +P
Sbjct: 1044 KGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTP 1082
Score = 54.7 bits (130), Expect = 2e-07
Identities = 100/400 (25%), Positives = 136/400 (34%), Gaps = 54/400 (13%)
Query: 35 PKTLSPSRSQRSRLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMWASPAPTL 94
P +P + S PK T P PS GTP+LP+TT P+
Sbjct: 1312 PPAATPPSPKGSPGTPPPKGAPTPPAVTP------PSPKGTPTLPATTPSSKGGPTTPSS 1365
Query: 95 IDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEG 154
+ A ++ A +R PA P+P SP S P
Sbjct: 1366 KEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKG----DPTSPAVIPLSPKKAPATPVT 1421
Query: 155 RPHTAVP-----TAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRS 209
R A P T VT S AP + SS D +L + K
Sbjct: 1422 REGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGD---PTLPAVTPPSPKEP 1478
Query: 210 KASISSSSSLSPSDASTSSFPTSSDGL------SPFSETFIPDSSKG--------LGPRA 255
A ++S SP A + P + L SP P S + L +
Sbjct: 1479 PAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKT 1538
Query: 256 PASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPA 315
PA+ AP +A P P+ + P P K A S + + P +TP+
Sbjct: 1539 PATLAPKEALIPPAMTVPSPKKTPAIPTP----------KEAPATPSSKEASSPPAVTPS 1588
Query: 316 LRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEV-PLSPAEQATTVKASPPAFQVG 374
A S K +PPA S K TP PE P +PA + T SPP
Sbjct: 1589 TYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGT--PTSPPV---- 1642
Query: 375 SPEAL--APPPPAADHAPSEALLAQ---GRPAAAGCRRLR 409
+P +L +P PA+ A + Q G PA G L+
Sbjct: 1643 TPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALK 1682
Score = 52.4 bits (124), Expect = 8e-07
Identities = 78/352 (22%), Positives = 129/352 (36%), Gaps = 73/352 (20%)
Query: 35 PKTLSPSRSQRSRLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMWASPAPTL 94
P ++P +++ APK GP +P SS G P+LP+ T PAP
Sbjct: 1435 PPAVTPVSLKKAPATSAPKG---GPATP--------SSKGDPTLPAVTPPSPKEPPAP-- 1481
Query: 95 IDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEG 154
+Q +S ++ PA P P L + P + A P
Sbjct: 1482 ---------------KQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPAT----PSS 1522
Query: 155 RPHTAVPTAVNVTSASHA-VAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASI 213
R PTA ++ + A +AP + + T S ++ A K + A+
Sbjct: 1523 RRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPK--------KTPAIPTPKEAPATP 1574
Query: 214 SSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAP 273
SS + SP + S++ + P + L P A SP+P +A TP P
Sbjct: 1575 SSKEASSPPAVTPSTYKGA------------PSPKELLIPPAVTSPSPKEAPTPPAVTPP 1622
Query: 274 ASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKALPPAAG 333
+ + P P KG PP+TP+ + + A
Sbjct: 1623 SPEKGPATP------------------APKGTPT-SPPVTPSSLKDSPTSPASVTCKMGA 1663
Query: 334 SVIRKSEATPS-PGACLQPEVPLSPAEQATTVKASPPAFQVGSPEALAPPPP 384
+V + S+ P+ G EV ++PA ++T + +P + ++ A PP
Sbjct: 1664 TVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPP 1715
Score = 48.5 bits (114), Expect = 1e-05
Identities = 94/379 (24%), Positives = 133/379 (35%), Gaps = 62/379 (16%)
Query: 37 TLSPSRSQRSRLPQAPKALATGPN---SPELFEESWPSSSGTPSLPSTTEGQMWASPAPT 93
+++ S +++R APK + P+ +P + PS G P+ PS WA P
Sbjct: 912 SMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPS----PKWAPTPPA 967
Query: 94 LIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPE 153
A P S + PA P+P +P P AA P+
Sbjct: 968 ------------------ATPPS-PKGGPATPSP-------KGAPTP----PAATPPSPK 997
Query: 154 GRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASI 213
G P T P A +P +S T + K +
Sbjct: 998 GGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAP 1057
Query: 214 SSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAP 273
++ ++ PS + P+ +P + T P S KG PA+P+P A P PA P
Sbjct: 1058 TTPAATLPSPKGGPATPSLKGAPTPPAAT--PPSPKG----GPATPSPKGAPMP-PAATP 1110
Query: 274 ASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVP----PLTPALRTLAESLKAKALP 329
S + L ++ KG A P P TPA T A P
Sbjct: 1111 PSPKGGLATPP---HKGAPTTPAATPPSPKGGLATPPPKGAPTTPA-ATPPSPKGGLATP 1166
Query: 330 PAAGSVIRKSEATPSP-GACLQPEVPLSPAEQATTVKASPPAFQVG----SPEALAPPPP 384
P G+ + PSP G P SP TT A+PP+ + G SP+ AP P
Sbjct: 1167 PPKGAPTTPAATPPSPKGGLATP----SPKGAPTTPAATPPSPKGGLATPSPKG-APTTP 1221
Query: 385 AADHAPSEALLAQGRPAAA 403
AA + LA P A
Sbjct: 1222 AATPPSPKGGLATPSPKGA 1240
Score = 48.1 bits (113), Expect = 1e-05
Identities = 96/404 (23%), Positives = 148/404 (36%), Gaps = 72/404 (17%)
Query: 9 SIQDSPFGDAPLGRSHYWPSQSQTWCPKTLSPSRSQRSRLPQAPKALATGPNSPELFEES 68
S++ +P AP G S+ P PS + P APK +AT +SP+ +
Sbjct: 1442 SLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKE----PPAPKQVATS-SSPKKAPAT 1496
Query: 69 WPSSSGTPSLPS---TTEGQMWASP-------APT---LIDSGDSVVAKYINRFRQAQPT 115
P+ G P+LP+ ++ ++ A+P APT L + +A A
Sbjct: 1497 -PAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTV 1555
Query: 116 SREERQPAGPTPADFWWLQSD----SPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSASH 171
++ PA PTP + S SP + S GA P+ +P AV S
Sbjct: 1556 PSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPK---ELLIPPAVTSPSPKE 1612
Query: 172 AVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSFPT 231
A P ++ S + +S ++PS S PT
Sbjct: 1613 APTP------------------PAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDS--PT 1652
Query: 232 SSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWR 291
S ++ +P +SKGL PA P + APAP S+ P
Sbjct: 1653 SPASVTCKMGATVPQASKGL----PAKKGPTALKEVLVAPAPESTPIITAPT-------- 1700
Query: 292 QRRKLEQAQGSKGDRAWVPPLTPALRTLAESL-KAKALPPAAGSVIRKSEATPSPG--AC 348
RK Q + S A PP+ P S + PA ++K + + G A
Sbjct: 1701 --RKGPQTKKSS---ATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDAS 1755
Query: 349 LQPEVPLSPAEQATTVKASPPAFQVGSPE------ALAPPPPAA 386
P+ PL+P E + + AF+ P+ + AP PP +
Sbjct: 1756 HSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVS 1799
Score = 43.9 bits (102), Expect = 3e-04
Identities = 97/388 (25%), Positives = 129/388 (33%), Gaps = 73/388 (18%)
Query: 51 APKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFR 110
AP A P SP+ + PS G P+ P+ T SPA T G S
Sbjct: 985 APTPPAATPPSPK-GGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSP 1043
Query: 111 QAQPTSREERQPAGPTPADFWWLQSDSP-DPSSQSA----AAGANKPEGRPHTAVPTAVN 165
+ P + + A TPA P PS + A AA P+G P T P
Sbjct: 1044 KGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAP 1103
Query: 166 VTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDAS 225
+ A+ +P + H K + ++ ++ PS
Sbjct: 1104 MPPAATPPSPKGGLATPPH-------------------------KGAPTTPAATPPSPKG 1138
Query: 226 TSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDD 285
+ P +P + P S KG A+P P A T TPA P S + L
Sbjct: 1139 GLATPPPKG--APTTPAATPPSPKG----GLATPPPKGAPT-TPAATPPSPKGGLA---- 1187
Query: 286 ILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKALPPAAGSVIRKSEATPSP 345
KG P TPA T A P G+ + PSP
Sbjct: 1188 -------------TPSPKG-----APTTPAA-TPPSPKGGLATPSPKGAPTTPAATPPSP 1228
Query: 346 -GACLQPEVPLSPAEQATTVKASPPAFQVGS---PEALAPPPPAADHAPSEALLA----Q 397
G P SP TT A+PP+ + G P AP PPAA + LA +
Sbjct: 1229 KGGLATP----SPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHK 1284
Query: 398 GRPAAAGCRRLRRQRVPGRSRAAGAKSP 425
G P A + P S GA +P
Sbjct: 1285 GAPNPAVVTPPSPKGGPATSPPKGAPTP 1312
Score = 33.1 bits (74), Expect = 0.49
Identities = 70/384 (18%), Positives = 131/384 (34%), Gaps = 48/384 (12%)
Query: 35 PKTLSPSRSQRSRLPQAPKALATGP--NSPELFEESWPSSSGTPSLPSTTEGQMWASPAP 92
PK S + R+P +P N P +P+ ++P++ EG ++
Sbjct: 490 PKEPSTQVATTLRIPVSPPLPDPEDLKNLPSSVLVKFPTQKDLQTVPASLEGAPFSPAQA 549
Query: 93 TLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKP 152
L D V + QA P + Q +P SP+ + + G P
Sbjct: 550 GLTTKKDPTVLPLV----QAAPKNSPSFQSTSSSPEI-----PLSPEATLAKKSLGEPLP 600
Query: 153 EGRPHTAVPTAVNVTSASHAV-----------APLQEIKQNLHTWNSSLLDLETLSLQSR 201
G+P +++ + + V S++ + PL +K +L T + LE+
Sbjct: 601 IGKPASSMTSPLGVNSSASVIKTDSYAGPDSAGPL--LKSSLITPTVAAFPLESADPAGV 658
Query: 202 AARLLKRSKASISSSS-------SLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPR 254
A K + +++S SL+P + ++ L P + P +
Sbjct: 659 APTTAKGTSTYTTTASPFLEGTVSLAPKNHPVKEGTLTTLPLVPTASENCPVAPSPQNTC 718
Query: 255 APASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTP 314
AP + + P P+P+ A P ++ G A P +
Sbjct: 719 APLATLVLAPEIPKSVPSPSLPPAGTPP------------GTKKVDGISHTSALAPVASS 766
Query: 315 ALRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQVG 374
E A A + G++ +++ G + P+ P ++ + P +
Sbjct: 767 PKECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKG-SAGPDTPIGNLS 825
Query: 375 SPEALAPPPPAADHAPSEALLAQG 398
SP + P A P +L QG
Sbjct: 826 SPVS----PVEASFLPENSLSFQG 845
Score = 30.0 bits (66), Expect = 4.2
Identities = 58/266 (21%), Positives = 94/266 (35%), Gaps = 28/266 (10%)
Query: 27 PSQSQTWCPKTLSPSRSQRSRLPQAPKALATGPN-SPELFEESWPSSSGT------PSLP 79
PS + P ++P ++ APK T P +P ++S P+S + ++P
Sbjct: 1608 PSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDS-PTSPASVTCKMGATVP 1666
Query: 80 STTEGQMWASPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPD 139
++G + A PT + A A + + + T PD
Sbjct: 1667 QASKG-LPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPI------CPD 1719
Query: 140 PSSQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLET-LSL 198
PS+++ + G P +P + + + K H+ L E+ S
Sbjct: 1720 PSAKNGSKGPLSTVA-PAPLLPVQKDSSKTAKG-------KDASHSPKGPLAPPESKAST 1771
Query: 199 QSRAARLLKRSKASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGL---GPRA 255
AA K S+S S +PS + S P + F+P SS GL P
Sbjct: 1772 PLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLPPKQQFLP-SSPGLVLESPSK 1830
Query: 256 PASPAPAQAQTPTPAPAPASSQAPLR 281
P +PA P P P S P +
Sbjct: 1831 PLAPADEDELLPLIPPEPISGGVPFQ 1856
>gi|66529407 tensin [Homo sapiens]
Length = 1735
Score = 55.5 bits (132), Expect = 9e-08
Identities = 100/410 (24%), Positives = 155/410 (37%), Gaps = 76/410 (18%)
Query: 73 SGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWW 132
SG S +E + PAP S V + +N ++Q Q ++ R P P +
Sbjct: 614 SGMFRSQSFSEAEPQLPPAPVRGGSSREAVQRGLNSWQQQQQQQQQPRPP--PRQQERAH 671
Query: 133 LQS-----DSPDPSSQSA---------AAGANKPEGRPHTAVPTAVNVTSASHAVAPLQE 178
L+S SP P +++ AA + E T +++ AS A APL +
Sbjct: 672 LESLVASRPSPQPLAETPIPSLPEFPRAASQQEIEQSIETLNMLMLDLEPAS-AAAPLHK 730
Query: 179 IKQNLHTW-NSSLLDLETLSLQSRAARLLKRSKAS-ISSSSSL-SPSDASTSSFPTSSDG 235
+ W +S L + LS SR + L +S++ I S SL +P A +S + G
Sbjct: 731 SQSVPGAWPGASPLSSQPLSGSSRQSHPLTQSRSGYIPSGHSLGTPEPAPRASLESVPPG 790
Query: 236 LS---------------------PFSET---FIPDSSKGLGPRAPASPAPAQAQTPTPAP 271
S P S + F+P + GP+ P + P P +P
Sbjct: 791 RSYSPYDYQPCLAGPNQDFHSKSPASSSLPAFLPTTHSPPGPQQPPASLPGLTAQPLLSP 850
Query: 272 APASSQAPLRPEDDIL-YQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKALPP 330
A+S PE++ L + ++ Q + A P P R A + + P
Sbjct: 851 KEATSDPSRTPEEEPLNLEGLVAHRVAGVQAREKQPA--EPPAPLRRRAASDGQYENQSP 908
Query: 331 AAGSVIRKSEATPSPGACLQPEVPLSPA--------------------EQATTVKASPPA 370
A S +S SP C+ PE+ L+ A E T +SPP
Sbjct: 909 EATS--PRSPGVRSPVQCVSPELALTIALNPGGRPKEPHLHSYKEAFEEMEGTSPSSPPP 966
Query: 371 FQVGSPEALAPPPPAA----DHAPSEALLAQGRPAAAGCRRLRRQRVPGR 416
V SP LA P +A H P++ LL P RR++ + G+
Sbjct: 967 SGVRSPPGLAKTPLSALGLKPHNPADILL---HPTGVTRRRIQPEEDEGK 1013
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 55.5 bits (132), Expect = 9e-08
Identities = 109/410 (26%), Positives = 145/410 (35%), Gaps = 108/410 (26%)
Query: 27 PSQSQTWCPKTLSPSRSQRSRLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQM 86
P+ + +W P LSP S+R P++P+ + P+S + S SGTP+LP
Sbjct: 552 PNPANSWVPG-LSPGGSRRP--PRSPERTLS-PSS------GYSSQSGTPTLPPKGLAGP 601
Query: 87 WASPAPTLIDSGDSVVAKYINRFRQAQPTSREE----RQPAGPTPADFWWLQSDSPDPS- 141
ASP +AQP E R P + L S S DP+
Sbjct: 602 PASPG-------------------KAQPPKPERVTSLRSPGASVSSSLTSLCSSSSDPAP 642
Query: 142 SQSAAAGANKPEGR-----PHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETL 196
S + P G PH VP AP + N + L
Sbjct: 643 SDRSGPQILTPLGDRFVIPPHPKVP------------APFSPPPSKPRSPNPAAPALA-- 688
Query: 197 SLQSRAARLLKRSKASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAP 256
A +S +DAS S PT L+P E+ P SK P P
Sbjct: 689 --------------APAVVPGPVSTTDASPQSPPTPQTTLTPLQES--PVISKDQSP--P 730
Query: 257 ASPAPAQAQTPTPAPAP-ASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPA 315
SP P+ P P P +AP E A+ D W PP PA
Sbjct: 731 PSPPPSYHPPPPPTKKPEVVVEAP--------------SASETAEEPLQDPNWPPPPPPA 776
Query: 316 LRTLAESLKAKALPPAAGSVIRKSEATPSP-GACLQPEVPLSPA---EQATTVKASPPAF 371
+ L PP + S A+P P G PE+ SPA AT ++ PP
Sbjct: 777 PE--EQDLSMADFPPPEEAFF--SVASPEPAGPSGSPELVSSPAASSSSATALQIQPP-- 830
Query: 372 QVGSPEALAPPPPAADHAPSEALLAQGRPAAAGCRRLRRQRVPGRSRAAG 421
GSP+ PP A AP+ A A G A +L ++ G S+ G
Sbjct: 831 --GSPD-----PPPAPPAPAPASSAPGHVA-----KLPQKEPVGCSKGGG 868
Score = 36.6 bits (83), Expect = 0.044
Identities = 58/279 (20%), Positives = 92/279 (32%), Gaps = 53/279 (18%)
Query: 95 IDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDP--SSQSAAAGANKP 152
+ S + + RF R P+ + W S S D S S +
Sbjct: 382 LHSASPASVRSLGRFSSVSSPQPRSRHPSSSSDT---WSHSQSSDTIVSDGSTLSSKGGS 438
Query: 153 EGRPHTAVPTAVNVTSASHAVAPLQE--IKQNLHTWNSSLLDLETLSLQSRAARLLKRSK 210
EG+P ++ +AS++V P + + + S+ +TLS++S + S
Sbjct: 439 EGQPESS--------TASNSVVPPPQGGSGRGSPSGGSTAEASDTLSIRSSG----QLSG 486
Query: 211 ASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPA 270
S+S P + GL+ +PD GL P+ P + PT
Sbjct: 487 RSVSLRKLKRPPPPPRRTHSLHQRGLA------VPDGPLGLPPKPERKQQPQLPRPPTTG 540
Query: 271 PAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKALPP 330
+ + AP P +WVP L+P + L P
Sbjct: 541 GSEGAGAAPCPPNP--------------------ANSWVPGLSPGGSRRPPRSPERTLSP 580
Query: 331 AAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPP 369
++G + T P P P SP KA PP
Sbjct: 581 SSGYSSQSGTPTLPPKGLAGP--PASPG------KAQPP 611
Score = 32.0 bits (71), Expect = 1.1
Identities = 83/348 (23%), Positives = 116/348 (33%), Gaps = 92/348 (26%)
Query: 27 PSQSQTWCPKTLSPSRSQRSRLPQAPKALATGP----NSPELFEESWPSSSGTPSLPSTT 82
P+ T P SP S+ P +P P PE+ E+ PS+S T P
Sbjct: 708 PTPQTTLTPLQESPVISKDQSPPPSPPPSYHPPPPPTKKPEVVVEA-PSASETAEEP--L 764
Query: 83 EGQMWASPAPTLIDSGDSVVAKYINR----FRQAQPTSREERQPAGPTPADFWWLQSDSP 138
+ W P P + D +A + F A P +PAGP+ + SP
Sbjct: 765 QDPNWPPPPPPAPEEQDLSMADFPPPEEAFFSVASP------EPAGPSGSPEL---VSSP 815
Query: 139 DPSSQSAAAGANKPEGRPHT--AVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETL 196
SS SA A +P G P A P +SA VA L + +
Sbjct: 816 AASSSSATALQIQPPGSPDPPPAPPAPAPASSAPGHVAKLPQKE---------------- 859
Query: 197 SLQSRAARLLKRSKASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAP 256
P S P D +P P + + R+
Sbjct: 860 ------------------------PVGCSKGGGPPREDVGAPL---VTPSLLQMVRLRSV 892
Query: 257 ASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPAL 316
+P A PTPA P++ Q PLR + G + VP + L
Sbjct: 893 GAPGGA----PTPALGPSAPQKPLR------------------RALSGRASPVPAPSSGL 930
Query: 317 RTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTV 364
A LKA +L + G S A P+ +P P SPA A+ +
Sbjct: 931 HA-AVRLKACSLAASEG----LSSAQPNGPPEAEPRPPQSPASTASFI 973
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 55.1 bits (131), Expect = 1e-07
Identities = 81/327 (24%), Positives = 117/327 (35%), Gaps = 51/327 (15%)
Query: 122 PAGPTPADFWWLQSDSP----DPSSQSAAAGANK----PEGRPHTAVPTAVNVTSASHAV 173
P GP AD +P +PS + A + + P RP + +P ++
Sbjct: 1015 PNGPALAD-----GPAPVSPLEPSPEKVATISPRRHAMPGSRPRSRIPVLLSEEDTGSEP 1069
Query: 174 APLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSFPTSS 233
+ K+ DL L ++ R RLL R + SSSSS AS + T S
Sbjct: 1070 SGSLSAKERWSKRARPQQDLARLVMEKRQGRLLLRLASGASSSSSEEQRRASETLSGTGS 1129
Query: 234 DGLSPFSE--TFIPDSSKGLGPRAPASPAPAQAQTPTPAPA--PASSQAPLRPEDDILYQ 289
+ +P SE +P S P P + P P A PAS P D
Sbjct: 1130 EEDTPASEPAAALPRKSGRAAATRSRIPRPIGLRMPMPVAAQQPASRSHGAAPALDTAIT 1189
Query: 290 WRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKALPPAAGSVIRKSEATPSPGACL 349
R + + TP A L+ K PP G +++A P A
Sbjct: 1190 SRLQLQ-----------------TPPGSATAADLRPKQ-PPGRGLGPGRAQAGARPPAPR 1231
Query: 350 QPEVPLSPAEQATTVKASPPAFQVGSPEALAP--------PPPAADHAPSEALLAQGRPA 401
P +P S A ASP + + E+ +P PPP P G P+
Sbjct: 1232 SPRLPAS-TSAARNASASPRSQSLSRRESPSPSHQARPGVPPPRG--VPPARAQPDGTPS 1288
Query: 402 AAGCR-----RLRRQRVPGRSRAAGAK 423
G + +L+ QR + RA GA+
Sbjct: 1289 PGGSKKGPRGKLQAQRATTKGRAGGAE 1315
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 53.9 bits (128), Expect = 3e-07
Identities = 54/190 (28%), Positives = 68/190 (35%), Gaps = 25/190 (13%)
Query: 252 GPRAPASPAPAQAQT---PTPAPAPASSQAPLRPEDD----------ILYQWRQRRKLEQ 298
GP PA PA A+ P P P P P +P L
Sbjct: 156 GPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAV 215
Query: 299 AQGSKGDRAWVP-PLTPALRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLS- 356
+ + G A +P P A T+ ++ PP G+ + A PSP A P P +
Sbjct: 216 SLVNNGPAALLPLPKPAAPGTVIQT------PPFVGAAAPPAPAAPSPPAAPAPAAPAAA 269
Query: 357 --PAEQATTVKASPPAFQVGSPEAL--APPPPAADHAPSEALLAQGRPAAAGCRRLRRQR 412
P A A PP G P A PPP AA + S PAA G + Q
Sbjct: 270 PPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQP 329
Query: 413 VPGRSRAAGA 422
PG + AA A
Sbjct: 330 GPGAAAAAPA 339
Score = 45.4 bits (106), Expect = 1e-04
Identities = 48/173 (27%), Positives = 63/173 (36%), Gaps = 17/173 (9%)
Query: 245 PDSSKGLGPRAPASPAPAQAQTPTPA------------PAPASSQAPLRPEDDILYQWRQ 292
P + G GP APA AP A P PA P P S + PL P +
Sbjct: 67 PAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKL 126
Query: 293 RRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQP- 351
R +GS G A VP + A P ++ ++ P PG P
Sbjct: 127 R---PPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPG 183
Query: 352 EVPLSPAEQATTVKASPPAFQVGSPEALAPPPPAADHAPSEALLAQGRPAAAG 404
P PA + A + S A AP ++ P+ ALL +PAA G
Sbjct: 184 PGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPA-ALLPLPKPAAPG 235
Score = 42.0 bits (97), Expect = 0.001
Identities = 67/234 (28%), Positives = 87/234 (37%), Gaps = 32/234 (13%)
Query: 202 AARLLKRSKASISSSSSLSPSDASTSSFPTSSDGL----SPFSETFIPDSSKGLGPRAPA 257
AA+ L S A ++S + +P+ + ++ P + L +P + P P APA
Sbjct: 194 AAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPA 253
Query: 258 SPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALR 317
+P+P A P PA APA++ P P L R G VPP PA
Sbjct: 254 APSPPAA--PAPA-APAAAPPPPPPAPATL-----ARPPGHPAGPPTAAPAVPP--PAAA 303
Query: 318 TLAESLKAKALP-PAAGSVIRKSEATPSPGACLQPEVPLSPAEQAT-TVKASPPAFQ--- 372
S A P PAAG S P PGA P AE V+A+PPA Q
Sbjct: 304 QNGGSAGAAPAPAPAAGGPAGVS-GQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLA 362
Query: 373 ------------VGSPEALAPPPPAADHAPSEALLAQGRPAAAGCRRLRRQRVP 414
+G A P PAA P+ AAG R P
Sbjct: 363 ASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTP 416
Score = 30.4 bits (67), Expect = 3.2
Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 6/81 (7%)
Query: 343 PSPGACLQPEVPLSPAEQATTVKASPPAFQVGSPEALAPPPPAADHA--PSEALLAQGRP 400
P P + +P VP PA A ++ P GS + AP P AA A P A +P
Sbjct: 105 PGPPSPRRPLVPAGPAPPAAKLRPPPE----GSAGSCAPVPAAAAVAAGPEPAPAGPAKP 160
Query: 401 AAAGCRRLRRQRVPGRSRAAG 421
A R PG G
Sbjct: 161 AGPAALAARAGPGPGPGPGPG 181
>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
Length = 825
Score = 53.5 bits (127), Expect = 4e-07
Identities = 57/225 (25%), Positives = 86/225 (38%), Gaps = 16/225 (7%)
Query: 211 ASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKG-----LGPRAPASPAPAQAQ 265
A + + + SP TS+ ++ SP +E + + APA PA+AQ
Sbjct: 484 ADETPAEARSPLSEETSAEEAHAEVQSPLAEETTAEEASAEIQLLAAIEAPADETPAEAQ 543
Query: 266 TP-----TPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLA 320
+P + APA Q+P I + + + + + + L A A
Sbjct: 544 SPLSEETSAEEAPAEVQSPSAKGVSIEEAPLELQPPSGEETTAEEASAAIQLLAATEASA 603
Query: 321 ESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQVGSPEALA 380
E A+ PP A +E P P EV PAE+A PPA + +P +
Sbjct: 604 EEAPAEVQPPPAEEA--PAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEE--APAEVQ 659
Query: 381 PPPPAADHAPSEALLAQGRPAAAGCRRLRRQRVPGRSRAAGAKSP 425
PPP A+ AP+E A A + L + P A SP
Sbjct: 660 PPP--AEEAPAEVQPPPAEEAPAEVQSLPAEETPIEETLAAVHSP 702
Score = 47.8 bits (112), Expect = 2e-05
Identities = 69/293 (23%), Positives = 108/293 (36%), Gaps = 41/293 (13%)
Query: 122 PAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQ 181
PA TPA+ S + S++ A A P TA + + + AP E
Sbjct: 483 PADETPAEA--RSPLSEETSAEEAHAEVQSPLAEETTAEEASAEIQLLAAIEAPADETPA 540
Query: 182 NLHTWNSSLLDLETL--SLQSRAARLLKRSKASISSSSSLSP--SDASTSSFPTSSDGLS 237
+ S E +QS +A+ + +A + L P + +T+ +++ L
Sbjct: 541 EAQSPLSEETSAEEAPAEVQSPSAKGVSIEEAPLE----LQPPSGEETTAEEASAAIQLL 596
Query: 238 PFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLE 297
+E ++ + P PA APA+ Q P APA Q P E +++
Sbjct: 597 AATEASAEEAPAEVQP-PPAEEAPAEVQPPPAEEAPAEVQPPPAEE--------APAEVQ 647
Query: 298 QAQGSKGDRAWVPPLTPALRTLAESLKAKALPPAAGSVIRKSEATPSP--------GACL 349
+ PP AE A+ PP A + ++ P+ A
Sbjct: 648 PPPAEEAPAEVQPP-------PAEEAPAEVQPPPAEEAPAEVQSLPAEETPIEETLAAVH 700
Query: 350 QPEVPLSPAEQATTVKASPPA-------FQVGSPEALAPPPPAADHAPSEALL 395
P PAE+A+ K SPPA F +G A PPP+ EAL+
Sbjct: 701 SPPADDVPAEEASVDKHSPPADLLLTEEFPIGEASAEVSPPPSEQTPEDEALV 753
Score = 33.9 bits (76), Expect = 0.29
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Query: 321 ESLKAKALPPAAGSVIRKSEATPSPGACLQ--PEVPLSPAEQATTVKAS-------PPAF 371
E AK PP K+E P+ +Q P +P +A T A PPA
Sbjct: 263 EKFPAKIQPPLVEEATAKAEPRPAEETHVQVQPSTEETPDAEAATAVAENSVKVQPPPAE 322
Query: 372 QVGSPEALAP-PPPAADHAPSEALLAQGRPAAA 403
+ E A PP+A+ +PS LLA+ P +A
Sbjct: 323 EAPLVEFPAEIQPPSAEESPSVELLAEILPPSA 355
Score = 30.8 bits (68), Expect = 2.4
Identities = 46/179 (25%), Positives = 68/179 (37%), Gaps = 20/179 (11%)
Query: 241 ETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLE-QA 299
E +P +G + AS A+ + P+ PA Q PL E + R + Q
Sbjct: 237 EVTVPVVQEGSAVKKVAS---AEIEPPSTEKFPAKIQPPLVEEATAKAEPRPAEETHVQV 293
Query: 300 QGSKGDRAWVPPLTPALRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAE 359
Q S + P A +AE+ K PP A ++ P P SP+
Sbjct: 294 QPSTEET----PDAEAATAVAEN-SVKVQPPPA----EEAPLVEFPAEIQPPSAEESPSV 344
Query: 360 QATTVKASPPAFQVGSPEALAPP----PPAADHAPSEALLAQGRPAAAGCRRLRRQRVP 414
+ P A + S E PP PP A+ +PS LL + R +A + Q +P
Sbjct: 345 ELLAEILPPSAEESPSEE---PPAEILPPPAEKSPSVELLGEIRSPSAQKAPIEVQPLP 400
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 52.8 bits (125), Expect = 6e-07
Identities = 82/395 (20%), Positives = 119/395 (30%), Gaps = 72/395 (18%)
Query: 2 DRSLPVFSIQDSPFGDAPLGRSH--------YWPSQSQTWCPKTLSPSRSQRSRLPQAPK 53
D S+ + FG+ P G + WP C T SP + S P +
Sbjct: 1358 DVSVGFICKNEDQFGNGPFGLCYDYKIRVNCCWPMDK---CITTPSPPTTTPSPPPTSTT 1414
Query: 54 ALA-TGPNSPELFEESWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFRQA 112
L T SP + P + TPS P TT +P PT S
Sbjct: 1415 TLPPTTTPSPPTTTTTTPPPTTTPSPPITTT----TTPPPTTTPS--------------- 1455
Query: 113 QPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSASHA 172
P S P TP+ + +P P + + + P T P+ T
Sbjct: 1456 PPISTTTTPPPTTTPSP----PTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTP---- 1507
Query: 173 VAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSFPTS 232
++ + L + S ++++ +P +T S PT+
Sbjct: 1508 -----------------------ITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTT 1544
Query: 233 SDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPA--PAPASSQAPLRPEDDILYQW 290
+ P S T +P P SP P TP P P+P ++ P P
Sbjct: 1545 TPITPPTSTTTLP-------PTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPP 1597
Query: 291 RQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKALPPAAG-SVIRKSEATPSPGACL 349
+ P P + LPP S + TP P
Sbjct: 1598 PTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTP 1657
Query: 350 QPEVPLSPAEQATTVKASPPAFQVGSPEALAPPPP 384
P +P+ TT PP SP P PP
Sbjct: 1658 SPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPP 1692
Score = 40.4 bits (93), Expect = 0.003
Identities = 41/188 (21%), Positives = 59/188 (31%), Gaps = 3/188 (1%)
Query: 214 SSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAP 273
+S+++L P+ +T S PT++ P + T P + P +P+P + T TP P
Sbjct: 1411 TSTTTLPPT--TTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPPISTTTTPPPTT 1468
Query: 274 ASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRA-WVPPLTPALRTLAESLKAKALPPAA 332
S P + P+TP T PP
Sbjct: 1469 TPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTT 1528
Query: 333 GSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQVGSPEALAPPPPAADHAPSE 392
+ TPSP P S T SPP +P P P PS
Sbjct: 1529 TTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSP 1588
Query: 393 ALLAQGRP 400
+ P
Sbjct: 1589 PTITTTTP 1596
Score = 34.3 bits (77), Expect = 0.22
Identities = 70/371 (18%), Positives = 110/371 (29%), Gaps = 78/371 (21%)
Query: 27 PSQSQTWCPKTLSPSRSQRSRLPQA-----------PKALATGPNSPELFEESWPSSSGT 75
P + T P T +PS + P P T P +P + P ++ T
Sbjct: 1464 PPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTT-T 1522
Query: 76 PSLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQS 135
PS P+TT +P PT S + P + P TP
Sbjct: 1523 PSPPTTTT----TTPPPTTTPSPPTTTP--------ITPPTSTTTLPPTTTP-------- 1562
Query: 136 DSPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSASHAVA-----PLQEIKQNLHTWNSSL 190
SP P++ + P P T P+ +T+ + P T S
Sbjct: 1563 -SPPPTTTTTPPPTTTPSP-PTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSP 1620
Query: 191 LDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKG 250
++ + L + S +++ +P +T S PT++ P + T P
Sbjct: 1621 PTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTP----- 1675
Query: 251 LGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVP 310
P + P+ T TP+P + P
Sbjct: 1676 -----PPTTTPSSPITTTPSPPTTTMTTP--------------------------SPTTT 1704
Query: 311 PLTPALRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPA 370
P +P T S PP TPSP +P + T PP+
Sbjct: 1705 PSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPPS 1764
Query: 371 FQVGSPEALAP 381
+P +P
Sbjct: 1765 I---TPPTFSP 1772
Score = 33.5 bits (75), Expect = 0.38
Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 10/183 (5%)
Query: 213 ISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPA 272
I+++++++P+ T + ++ ++ + T + + G + P + T TP P
Sbjct: 4132 ITTTTTVTPTPTPTGTQTPTTTPIT--TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPT 4189
Query: 273 PASSQA--PLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKALPP 330
P +Q P + + ++ + R+ PLT + L+ LPP
Sbjct: 4190 PTGTQTGPPTHTSTAPIAELTTSNPPPESSTPQTSRSTSSPLTESTTLLS------TLPP 4243
Query: 331 AAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQVGSPEALAPPPPAADHAP 390
A +TP+ LSP TT P + + AP P
Sbjct: 4244 AIEMTSTAPPSTPTAPTTTSGGHTLSPPPSTTTSPPGTPTRGTTTGSSSAPTPSTVQTTT 4303
Query: 391 SEA 393
+ A
Sbjct: 4304 TSA 4306
Score = 33.1 bits (74), Expect = 0.49
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 27 PSQSQTWCPKTLSPSRSQRSRLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQM 86
P +S T P+T SRS S L ++ L+T P + E+ + PS TP+ P+TT G
Sbjct: 4215 PPESST--PQT---SRSTSSPLTESTTLLSTLPPAIEMTSTAPPS---TPTAPTTTSGGH 4266
Query: 87 WASPAPTLIDS 97
SP P+ S
Sbjct: 4267 TLSPPPSTTTS 4277
Score = 31.2 bits (69), Expect = 1.9
Identities = 33/162 (20%), Positives = 49/162 (30%), Gaps = 45/162 (27%)
Query: 225 STSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPED 284
+T S PT++ P S T +P ++ P P + T TP+P ++ P
Sbjct: 1397 TTPSPPTTTPSPPPTSTTTLPPTTT---PSPPTTTTTTPPPTTTPSPPITTTTTP----- 1448
Query: 285 DILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKALPPAAGSVIRKSEATPS 344
P TP+ PP + + TPS
Sbjct: 1449 ------------------------PPTTTPS-------------PPISTTTTPPPTTTPS 1471
Query: 345 PGACLQPEVPLSPAEQATTVKASPPAFQVGSPEALAPPPPAA 386
P +P+ TT PP P PPA+
Sbjct: 1472 PPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPAS 1513
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 51.6 bits (122), Expect = 1e-06
Identities = 81/314 (25%), Positives = 123/314 (39%), Gaps = 41/314 (13%)
Query: 11 QDSPFGDAPLGRSHYWPSQSQTWCPKTLSPSRSQR--SRLPQAPKALATGPNS-PELFEE 67
Q P G G++ Y+ QS P+ P SQ+ S+ P A + P S P +
Sbjct: 456 QQGPSGYGQQGQTPYYNQQSPH--PQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQS 513
Query: 68 SWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKYINR---FRQAQPTSR-EERQPA 123
S P S PS P + SPAP S S ++ + Q Q S +++QP
Sbjct: 514 SQPPYSQQPSQPPHQQ-----SPAP--YPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQ 566
Query: 124 GPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNL 183
P P+ Q+ P P SQ + A + P + + S + + + K
Sbjct: 567 QPAPSTLSQ-QAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQ 625
Query: 184 HTWNSSLLDLETLSLQSRAARLLKRSKA----SISSSSSLSP----SDASTSSFPTSSDG 235
N LSLQSR + L S + + + +LSP S S+S S+
Sbjct: 626 EDMN--------LSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPA 677
Query: 236 LSPFSETFIPDSSKGLGPR-----APASPAPAQAQTPTPAPAPASSQAPLRP---EDDIL 287
SPFS P GP +PAS A +++ +PA P + P P D I+
Sbjct: 678 QSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIM 737
Query: 288 YQWRQRRKLEQAQG 301
+ + + Q +G
Sbjct: 738 HPSMNQSSIAQDRG 751
Score = 28.9 bits (63), Expect = 9.3
Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 7/82 (8%)
Query: 216 SSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLG-----PRAPASPAPAQAQTPTPA 270
S S PS +T + P T+ P + + G P + P Q Q P
Sbjct: 1350 SGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQLPPAQ 1409
Query: 271 PAPASSQ--APLRPEDDILYQW 290
P PAS Q A P+ D+ Q+
Sbjct: 1410 PQPASQQQAAQPSPQQDVYNQY 1431
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 51.6 bits (122), Expect = 1e-06
Identities = 81/314 (25%), Positives = 123/314 (39%), Gaps = 41/314 (13%)
Query: 11 QDSPFGDAPLGRSHYWPSQSQTWCPKTLSPSRSQR--SRLPQAPKALATGPNS-PELFEE 67
Q P G G++ Y+ QS P+ P SQ+ S+ P A + P S P +
Sbjct: 456 QQGPSGYGQQGQTPYYNQQSPH--PQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQS 513
Query: 68 SWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKYINR---FRQAQPTSR-EERQPA 123
S P S PS P + SPAP S S ++ + Q Q S +++QP
Sbjct: 514 SQPPYSQQPSQPPHQQ-----SPAP--YPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQ 566
Query: 124 GPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNL 183
P P+ Q+ P P SQ + A + P + + S + + + K
Sbjct: 567 QPAPSTLSQ-QAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQ 625
Query: 184 HTWNSSLLDLETLSLQSRAARLLKRSKA----SISSSSSLSP----SDASTSSFPTSSDG 235
N LSLQSR + L S + + + +LSP S S+S S+
Sbjct: 626 EDMN--------LSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPA 677
Query: 236 LSPFSETFIPDSSKGLGPR-----APASPAPAQAQTPTPAPAPASSQAPLRP---EDDIL 287
SPFS P GP +PAS A +++ +PA P + P P D I+
Sbjct: 678 QSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIM 737
Query: 288 YQWRQRRKLEQAQG 301
+ + + Q +G
Sbjct: 738 HPSMNQSSIAQDRG 751
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 51.2 bits (121), Expect = 2e-06
Identities = 86/367 (23%), Positives = 138/367 (37%), Gaps = 73/367 (19%)
Query: 27 PSQSQTWCPKTLSPSRSQRSRLPQAPKALATG--------------PNSPELFEESWPSS 72
P++ + T S R+ + +P + +AT P + S P++
Sbjct: 849 PAEGTSMPTSTYSEGRTPLTSMPVSTTLVATSAISTLSTTPVDTSTPVTNSTEARSSPTT 908
Query: 73 SGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWW 132
S S+P++T G+ ++P ++ DS VV+ E + TP D
Sbjct: 909 SEGTSMPTSTPGE-GSTPLTSMPDSTTPVVSS--------------EARTLSATPVD--- 950
Query: 133 LQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTW--NSSL 190
+ +P +S A + EG T++PT+ + S PL + HT NS
Sbjct: 951 --TSTPVTTSTEATSSPTTAEG---TSIPTS----TPSEGTTPLTSTPVS-HTLVANSEA 1000
Query: 191 LDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSFPTS--SDGLSPFSETFIPDSS 248
L T + S + + S+ +S P A +S PTS S+G +P + + +
Sbjct: 1001 STLSTTPVDSN-------TPLTTSTEASSPPPTAEGTSMPTSTPSEGSTPLTRMPVSTTM 1053
Query: 249 KGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAW 308
+ S PA TP + ASS + + + S+G
Sbjct: 1054 VASSETSTLSTTPADTSTPVTTYSQASSSSTT----------ADGTSMPTSTYSEGS--- 1100
Query: 309 VPPLT--PALRTLAESLKAKAL--PPAAGS--VIRKSEATPSPGACLQPEVPLSPAEQAT 362
PLT P L S +A L P S V +EA+ SP +P SP + T
Sbjct: 1101 -TPLTSVPVSTRLVVSSEASTLSTTPVDTSIPVTTSTEASSSPTTAEGTSIPTSPPSEGT 1159
Query: 363 TVKASPP 369
T AS P
Sbjct: 1160 TPLASMP 1166
Score = 50.8 bits (120), Expect = 2e-06
Identities = 73/326 (22%), Positives = 121/326 (37%), Gaps = 35/326 (10%)
Query: 46 SRLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKY 105
S P A++T +P +S+ S P+T+EG + PT S S Y
Sbjct: 3113 STTPVTSSAISTLSTTPVDTSTPVTTSTEAHSSPTTSEG----TSMPTSTPSEGSTPLTY 3168
Query: 106 INRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVN 165
+ +S + A TP D + S + +S + A G + P P + +
Sbjct: 3169 MPVSTMLVVSSEDSTLSA--TPVDTSTPVTTSTEATSSTTAEGTSIPTSTPSEGMTPLTS 3226
Query: 166 VTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDAS 225
V ++ VA +S L T + S + + S+ +S SP A
Sbjct: 3227 VPVSNTPVA------------SSEASILSTTPVDSN-------TPLTTSTEASSSPPTAE 3267
Query: 226 TSSFPTS--SDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPE 283
+S PTS S+G +P + + ++ + S PA TP + ASS P+
Sbjct: 3268 GTSMPTSTPSEGSTPLTSMPVSTTTVASSETSTLSTTPADTSTPVTTYSQASSSPPIADG 3327
Query: 284 DDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKALPPAAGSVIRKSEATP 343
+ ++GS TP + + A +L + + V +EA+
Sbjct: 3328 TSM-------PTSTYSEGSTPLTNMSFSTTPVVSSEASTLSTTPVDTST-PVTTSTEASL 3379
Query: 344 SPGACLQPEVPLSPAEQATTVKASPP 369
SP +P S + TT AS P
Sbjct: 3380 SPTTAEGTSIPTSSPSEGTTPLASMP 3405
Score = 45.1 bits (105), Expect = 1e-04
Identities = 88/383 (22%), Positives = 138/383 (36%), Gaps = 62/383 (16%)
Query: 27 PSQSQTWCPKTLSPSRSQRSRLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQM 86
P+ T P T +PS + L P + T +S + P+ + TP TT Q
Sbjct: 3264 PTAEGTSMP-TSTPSEGS-TPLTSMPVSTTTVASSETSTLSTTPADTSTPV---TTYSQ- 3317
Query: 87 WASPAPTLIDSGDSVVAKY-------INRFRQAQPTSREERQPAGPTPADFWWLQSDSPD 139
AS +P + D + Y N P E TP D + +P
Sbjct: 3318 -ASSSPPIADGTSMPTSTYSEGSTPLTNMSFSTTPVVSSEASTLSTTPVD-----TSTPV 3371
Query: 140 PSSQSAAAGANKPEGRP-HTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSL 198
+S A+ EG T+ P+ AS V+ + ++T +++ +D TL
Sbjct: 3372 TTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMPVSTTPVVSSEVNTLSTTPVDSNTL-- 3429
Query: 199 QSRAARLLKRSKASISSSSSLSPSDASTSSFPTS--SDGLSPFSETFIPDSSKGLGPRAP 256
+ S+ +S SP+ A +S PTS S+G +P S + + +
Sbjct: 3430 ------------VTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLSTTPVASSEAST 3477
Query: 257 ASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLT--P 314
S P TP +P +S +P E + + +G PLT P
Sbjct: 3478 LSTTPVDTSTPVTTSSPTNS-SPTTAE---------VTSMPTSTAGEGS----TPLTNMP 3523
Query: 315 ALRTLAESLKAKAL---PPAAGSVIRKSEATPSPGACLQ-----PEVPLSPAEQATTVKA 366
T S +A L P + + + S S A LQ P + TT+
Sbjct: 3524 VSTTPVASSEASTLSTTPVDSNTFVTSSSQASSSPATLQVTTMRMSTPSEGSSSLTTMLL 3583
Query: 367 SPPAFQVGSPEALAPPPPAADHA 389
S + V S EA P P+ D +
Sbjct: 3584 S--STYVTSSEASTPSTPSVDRS 3604
Score = 44.3 bits (103), Expect = 2e-04
Identities = 79/356 (22%), Positives = 138/356 (38%), Gaps = 42/356 (11%)
Query: 27 PSQSQTWCPKTLSPSRSQRSRLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQM 86
PS+ T P T P S +P +T +P + S P ++ T + S T +
Sbjct: 2215 PSEGST--PFTSMPV----STMPVVTSEASTLSATP--VDTSTPVTTSTEATSSPTTAEG 2266
Query: 87 WASPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAA 146
+ P TL + + + ++ A E TP D S++P +S A+
Sbjct: 2267 TSIPTSTLSEGTTPLTSIPVSHTLVAN----SEVSTLSTTPVD-----SNTPFTTSTEAS 2317
Query: 147 AGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLL 206
+ P TA T++ +++S PL + + + + ET +L + A
Sbjct: 2318 SP-------PPTAEGTSMPTSTSSEGNTPLTRMPVS----TTMVASFETSTLSTTPADT- 2365
Query: 207 KRSKASISSSSSLSPSDASTSSFPTS--SDGLSPFSETFIPDSSKGLGPRAPASPAPAQA 264
+ + S + SP+ A +S PTS S+G +P + + + S P
Sbjct: 2366 -STPVTTYSQAGSSPTTADDTSMPTSTYSEGSTPLTSVPVSTMPVVSSEASTHSTTPVDT 2424
Query: 265 QTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLK 324
TP ASS +P E + ++G+ + TP + + A +L
Sbjct: 2425 STPVTTSTEASS-SPTTAEGTSI------PTSPPSEGTTPLASMPVSTTPVVSSEAGTLS 2477
Query: 325 AKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPP--AFQVGSPEA 378
+ + + +EA+ SP VP+S A + +T+ S P V SPEA
Sbjct: 2478 TTPVDTST-PMTTSTEASSSPTTAEDIVVPISTASEGSTLLTSIPVSTTPVASPEA 2532
Score = 43.5 bits (101), Expect = 4e-04
Identities = 86/393 (21%), Positives = 136/393 (34%), Gaps = 61/393 (15%)
Query: 6 PVFSIQDSPFGDAPLGRSH-YWPSQSQTWCPKTLSPSRSQRSRLPQAPKALATGPNSPEL 64
PV S + S P+ S S T P T + S L + L + P S L
Sbjct: 1760 PVLSSEASTLSATPIDTSTPVTTSTEATSSPTTAEGTSIPTSTLSEGMTPLTSTPVSHTL 1819
Query: 65 FEESWPSS-SGTP--------------SLPSTTEGQMWASPAPTLIDSGDSVVAKYINRF 109
S S+ S TP S P+ EG A+ P+ + + +
Sbjct: 1820 VANSEASTLSTTPVDSNSPVVTSTAVSSSPTPAEGTSIATSTPSEGSTALTSIPVSTTTV 1879
Query: 110 RQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPH-TAVPTAVNVTS 168
++ + TP + S SP + S+ + EGRP T++P + +
Sbjct: 1880 ASSETNTLSTTPAVTSTPVTTYAQVSSSPTTADGSSMPTSTPREGRPPLTSIPVSTTTVA 1939
Query: 169 ASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSS 228
+S ++T +++L D R+ + S +S SP+ A +S
Sbjct: 1940 SSE-----------INTLSTTLADT--------------RTPVTTYSQASSSPTTADGTS 1974
Query: 229 FPTS--SDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDI 286
PT S+G +P + + + + S P TP SS I
Sbjct: 1975 MPTPAYSEGSTPLTSMPLSTTLVVSSEASTLSTTPVDTSTPATTSTEGSSSPTTAGGTSI 2034
Query: 287 LYQWRQRRKLEQA---------QGSKGDRAWVPPLTPALRTLAESLKAKALPPAAGSVIR 337
R A S+G+ P+ + + S +A + A GS +
Sbjct: 2035 QTSTPSERTTPLAGMPVSTTLVVSSEGNTLSTTPVDSKTQ-VTNSTEASSSATAEGSSMT 2093
Query: 338 KSEATPSPGACLQPEVPLSPAEQATTVKASPPA 370
S PS G+ L +PLS TT ASP A
Sbjct: 2094 IS--APSEGSPLLTSIPLS-----TTPVASPEA 2119
Score = 42.7 bits (99), Expect = 6e-04
Identities = 69/326 (21%), Positives = 122/326 (37%), Gaps = 35/326 (10%)
Query: 46 SRLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKY 105
S P A +T +P + + P + T S T + + P T + + +
Sbjct: 2523 STTPVASPEASTLSTTP--VDSNSPVVTSTEISSSATSAEGTSMPTSTYSEGSTPLRSMP 2580
Query: 106 INRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVN 165
++ +P + E TP D + S + SS A K P + P+ V+
Sbjct: 2581 VS----TKPLASSEASTLSTTPVDTSIPVTTSTETSSSPTTA---KDTSMP-ISTPSEVS 2632
Query: 166 VTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDAS 225
+ S V+ + T +++ +D TL + S+ +S SP+ A
Sbjct: 2633 TSLTSILVSTMPVASSEASTLSTTPVDTRTL--------------VTTSTGTSSSPTTAE 2678
Query: 226 TSSFPTSSDG--LSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPE 283
SS PTS+ G +P + + + + S P TP A ASS +P E
Sbjct: 2679 GSSMPTSTPGERSTPLTNILVSTTLLANSEASTLSTTPVDTSTPVTTSAEASS-SPTTAE 2737
Query: 284 DDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKALPPAAGSVIRKSEATP 343
+ R + GS + + P + A ++ A+ + V +EA+
Sbjct: 2738 GTSM------RISTPSDGSTPLTSILVSTLPVASSEASTVSTTAVDTSI-PVTTSTEASS 2790
Query: 344 SPGACLQPEVPLS-PAEQATTVKASP 368
SP +P S P+E +T + + P
Sbjct: 2791 SPTTAEVTSMPTSTPSETSTPLTSMP 2816
Score = 39.7 bits (91), Expect = 0.005
Identities = 82/397 (20%), Positives = 147/397 (37%), Gaps = 52/397 (13%)
Query: 27 PSQSQTWCPKTLSPSRSQRSRLPQ-----APKALATGPNSPELFEESWPSSSGTP--SLP 79
P++ + T S R+ + +P A A++ +P + S P ++ T S P
Sbjct: 1321 PAEGTSMPTSTYSEGRTPLTSIPVNTTLVASSAISILSTTP--VDNSTPVTTSTEACSSP 1378
Query: 80 STTEGQMWASPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPD 139
+T+EG + P+ G + + P E TP D +
Sbjct: 1379 TTSEGTSMPNSNPS---EGTTPLTSIPV---STTPVVSSEASTLSATPVD-------TST 1425
Query: 140 PSSQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIK-QNLHTWNSSLLDLETLSL 198
P + SA A ++ P TA ++ ++ S PL+ I N NS L T +
Sbjct: 1426 PGTTSAEATSS-----PTTAEGISIPTSTPSEGKTPLKSIPVSNTPVANSEASTLSTTPV 1480
Query: 199 QSRAARLLKRSKASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPAS 258
S + + S + SSS +P++ ++ + T S+G + + + ++ S
Sbjct: 1481 DSNSPVV-----TSTAVSSSPTPAEGTSIAISTPSEGSTALTSIPVSTTTVASSEINSLS 1535
Query: 259 PAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQ---------GSKGDRAWV 309
PA TP + ASS + S+ +
Sbjct: 1536 TTPAVTSTPVTTYSQASSSPTTADGTSMQTSTYSEGSTPLTSLPVSTMLVVSSEANTLST 1595
Query: 310 PPLTPALRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLS----PAEQATTVK 365
P+ + A S +A + A GS + S TPS G+ L +P+S + +A+T+
Sbjct: 1596 TPIDSKTQVTA-STEASSSTTAEGSSMTIS--TPSEGSPLLTSIPVSTTPVASPEASTLS 1652
Query: 366 ASPPAFQ---VGSPEALAPPPPAADHAPSEALLAQGR 399
+P + S E + P PA + + +GR
Sbjct: 1653 TTPVDSNSPVITSTEVSSSPTPAEGTSMPTSTYTEGR 1689
Score = 39.7 bits (91), Expect = 0.005
Identities = 74/337 (21%), Positives = 125/337 (37%), Gaps = 36/337 (10%)
Query: 46 SRLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKY 105
S LP A +T S + S P ++ T + S T ++ + P T ++ + +
Sbjct: 2759 STLPVASSEASTV--STTAVDTSIPVTTSTEASSSPTTAEVTSMPTSTPSETSTPLTSMP 2816
Query: 106 INRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVN 165
+N P + E TP D + +P +S A++ P TA V
Sbjct: 2817 VNH----TPVASSEAGTLSTTPVD-----TSTPVTTSTKASSS-------PTTAEGIVVP 2860
Query: 166 VTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDAS 225
+++AS L I + SS + TLS + + S+ S SP+ A
Sbjct: 2861 ISTASEGSTLLTSIPVSTTPVASS--EASTLSTTPVDTSI----PVTTSTEGSSSPTTAE 2914
Query: 226 TSSFP--TSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPE 283
+S P T S+ +P + + + S P +TP A ASS
Sbjct: 2915 GTSMPISTPSEVSTPLTSILVSTVPVAGSEASTLSTTPVDTRTPVTTSAEASSSPTTAEG 2974
Query: 284 DDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKALPPAAGSVIRKSEATP 343
+ R+ S + +P + TL+ + + P V +EA+
Sbjct: 2975 TSMPISTPGERRTPLTSMSV---STMPVASSEASTLSRTPADTSTP-----VTTSTEASS 3026
Query: 344 SPGACLQPEVPLS-PAEQATTVKASP-PAFQVGSPEA 378
SP +P+S P+E +T + + P V PEA
Sbjct: 3027 SPTTAEGTGIPISTPSEGSTPLTSIPVSTTPVAIPEA 3063
Score = 39.3 bits (90), Expect = 0.007
Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 10/140 (7%)
Query: 142 SQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIK-QNLHTWNSSLLDLETLSLQS 200
S++ A++ P TA T++ ++ S PL + +S +L T + S
Sbjct: 420 SKTFVTTASEASSSPTTAEDTSIATSTPSEGSTPLTSMPVSTTPVASSEASNLSTTPVDS 479
Query: 201 RAARLLKRSKASISSSSSLSPSDASTSSFPTS--SDGLSPFSETFIPDSSKGLGPRAPAS 258
+ ++ + S+ +S SP A +S PTS S+G +P + + + S
Sbjct: 480 K-------TQVTTSTEASSSPPTAEVNSMPTSTPSEGSTPLTSMSVSTMPVASSEASTLS 532
Query: 259 PAPAQAQTPTPAPAPASSQA 278
P TP + ASS +
Sbjct: 533 TTPVDTSTPVTTSSEASSSS 552
Score = 38.9 bits (89), Expect = 0.009
Identities = 65/285 (22%), Positives = 104/285 (36%), Gaps = 34/285 (11%)
Query: 9 SIQDSPFGDAPLGRSHYWPSQSQTWCPKTLSPSRSQRSRLPQAPKALATG-------PNS 61
S + S PL S + + ++ C T + S P L T S
Sbjct: 761 SSEASTLSTTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSIPVSITPVTS 820
Query: 62 PELFEESWPSSSGTP---SLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFRQAQPTSRE 118
PE + S TP + P TT ++ +SP P G S+ + R +
Sbjct: 821 PEA-----STLSTTPVDSNSPVTTSTEVSSSPTPA---EGTSMPTSTYSEGRTPLTS--- 869
Query: 119 ERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGR--PHTAVPTAVNVTSASHAVAPL 176
P T + + S P S N E R P T+ T++ ++ PL
Sbjct: 870 --MPVSTTLVATSAISTLSTTPVDTSTPV-TNSTEARSSPTTSEGTSMPTSTPGEGSTPL 926
Query: 177 QEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSFPTS--SD 234
+ + SS + TLS A + + + S+ ++ SP+ A +S PTS S+
Sbjct: 927 TSMPDSTTPVVSS--EARTLS----ATPVDTSTPVTTSTEATSSPTTAEGTSIPTSTPSE 980
Query: 235 GLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAP 279
G +P + T + + + S P + TP ASS P
Sbjct: 981 GTTPLTSTPVSHTLVANSEASTLSTTPVDSNTPLTTSTEASSPPP 1025
Score = 37.7 bits (86), Expect = 0.020
Identities = 45/211 (21%), Positives = 82/211 (38%), Gaps = 26/211 (12%)
Query: 71 SSSGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADF 130
+S+ S P+T EG + P T + + + + P + E TP D
Sbjct: 308 TSTEASSSPTTAEGT--SIPTSTYTEGSTPLTSTPAS----TMPVATSEMSTLSITPVDT 361
Query: 131 WWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSL 190
L + S +PSS P TA T++ ++ S PL + S++
Sbjct: 362 STLVTTSTEPSSL------------PTTAEATSMLTSTLSEGSTPLTNMPV------STI 403
Query: 191 LDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSFPTS--SDGLSPFSETFIPDSS 248
L + + + + ++ + +S +S SP+ A +S TS S+G +P + + +
Sbjct: 404 LVASSEASTTSTIPVDSKTFVTTASEASSSPTTAEDTSIATSTPSEGSTPLTSMPVSTTP 463
Query: 249 KGLGPRAPASPAPAQAQTPTPAPAPASSQAP 279
+ S P ++T ASS P
Sbjct: 464 VASSEASNLSTTPVDSKTQVTTSTEASSSPP 494
Score = 37.7 bits (86), Expect = 0.020
Identities = 81/363 (22%), Positives = 129/363 (35%), Gaps = 55/363 (15%)
Query: 46 SRLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKY 105
S +P A +T +P +S+ S P+T EG + P T + + +
Sbjct: 2936 STVPVAGSEASTLSTTPVDTRTPVTTSAEASSSPTTAEGT--SMPISTPGERRTPLTSMS 2993
Query: 106 INRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVN 165
++ P + E TPAD + +P +S A++ P TA T +
Sbjct: 2994 VS----TMPVASSEASTLSRTPAD-----TSTPVTTSTEASSS-------PTTAEGTGIP 3037
Query: 166 VTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDAS 225
+++ S PL I + T ++ + TLS + S S+ S SP+ A
Sbjct: 3038 ISTPSEGSTPLTSIP--VSTTPVAIPEASTLS----TTPVDSNSPVVTSTEVSSSPTPAE 3091
Query: 226 TSSFP--TSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASS------- 276
+S P T S+G +P + + + + S P TP A S
Sbjct: 3092 GTSMPISTYSEGSTPLTGVPVSTTPVTSSAISTLSTTPVDTSTPVTTSTEAHSSPTTSEG 3151
Query: 277 -----QAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKALPPA 331
P + Y + ++ S V TP + S +A + A
Sbjct: 3152 TSMPTSTPSEGSTPLTYMPVSTMLVVSSEDSTLSATPVDTSTP----VTTSTEATSSTTA 3207
Query: 332 AGSVIRKSEATPSPGACLQPEVPLSPAEQA---------TTVKASPPAFQVGSPEALAPP 382
G+ I S TPS G VP+S A T V ++ P S EA + P
Sbjct: 3208 EGTSIPTS--TPSEGMTPLTSVPVSNTPVASSEASILSTTPVDSNTPL--TTSTEASSSP 3263
Query: 383 PPA 385
P A
Sbjct: 3264 PTA 3266
Score = 37.4 bits (85), Expect = 0.026
Identities = 51/230 (22%), Positives = 91/230 (39%), Gaps = 26/230 (11%)
Query: 49 PQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKYINR 108
P A A++T +P + S P ++ T + S T + + P T + + + ++
Sbjct: 1701 PVASSAISTLSTTP--VDNSTPVTTSTEARSSPTTSEGTSMPNSTPSEGTTPLTSIPVS- 1757
Query: 109 FRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNVTS 168
P E TP D + +P +S A + EG T++PT+ +
Sbjct: 1758 ---TTPVLSSEASTLSATPID-----TSTPVTTSTEATSSPTTAEG---TSIPTS----T 1802
Query: 169 ASHAVAPLQEIKQNLHTW--NSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDAST 226
S + PL + HT NS L T + S + + S + SSS +P++ ++
Sbjct: 1803 LSEGMTPLTSTPVS-HTLVANSEASTLSTTPVDSNSPVV-----TSTAVSSSPTPAEGTS 1856
Query: 227 SSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASS 276
+ T S+G + + + ++ S PA TP A SS
Sbjct: 1857 IATSTPSEGSTALTSIPVSTTTVASSETNTLSTTPAVTSTPVTTYAQVSS 1906
Score = 37.4 bits (85), Expect = 0.026
Identities = 67/312 (21%), Positives = 116/312 (37%), Gaps = 46/312 (14%)
Query: 70 PSSSGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFRQ---AQPTSREERQPAGPT 126
P S +P + ST ++ +SP PT G S+ + R + P S + +
Sbjct: 2126 PVDSNSPVITST---EVSSSPIPT---EGTSMQTSTYSDRRTPLTSMPVSTTVVASSAIS 2179
Query: 127 PADFWWLQSDSPDPSSQSAAAGANKPEGRPH-TAVPTAVNVTSASHAVAPLQEIKQNLHT 185
+ + +P +S A + EG T+ P+ + S V+ + + T
Sbjct: 2180 TLSTTPVDTSTPVTNSTEARSSPTTSEGTSMPTSTPSEGSTPFTSMPVSTMPVVTSEAST 2239
Query: 186 WNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSFPTS--SDGLSPFSETF 243
+++ +D T + S+ ++ SP+ A +S PTS S+G +P +
Sbjct: 2240 LSATPVDTST--------------PVTTSTEATSSPTTAEGTSIPTSTLSEGTTPLTSIP 2285
Query: 244 IPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSK 303
+ + + S P + TP ASS P + + + S+
Sbjct: 2286 VSHTLVANSEVSTLSTTPVDSNTPFTTSTEASSPPPT----------AEGTSMPTSTSSE 2335
Query: 304 GDRAWVPPLT--PALRTLAESLKAKAL--PPAAGS--VIRKSEATPSPGACLQPEVPLSP 357
G+ PLT P T+ S + L PA S V S+A SP +P S
Sbjct: 2336 GN----TPLTRMPVSTTMVASFETSTLSTTPADTSTPVTTYSQAGSSPTTADDTSMPTST 2391
Query: 358 AEQATTVKASPP 369
+ +T S P
Sbjct: 2392 YSEGSTPLTSVP 2403
Score = 36.2 bits (82), Expect = 0.058
Identities = 73/348 (20%), Positives = 122/348 (35%), Gaps = 34/348 (9%)
Query: 27 PSQSQTWCP-KTLSPSRSQRSRLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQ 85
P+ T P T S + +R+P + +A+ S + ++ S P TT Q
Sbjct: 1025 PTAEGTSMPTSTPSEGSTPLTRMPVSTTMVASSETS------TLSTTPADTSTPVTTYSQ 1078
Query: 86 MWASPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSA 145
AS + T D + Y R + D+ P + S
Sbjct: 1079 --ASSSSTTADGTSMPTSTYSEGSTPLTSVPVSTRLVVSSEASTLSTTPVDTSIPVTTST 1136
Query: 146 AAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARL 205
A ++ P TA T++ + S PL + + SS + TLS +
Sbjct: 1137 EASSS-----PTTAEGTSIPTSPPSEGTTPLASMPVSTTLVVSS--EANTLS----TTPV 1185
Query: 206 LKRSKASISSSSSLSPSDASTSSFPTSSDG--LSPFSETFIPDSSKGLGPRAPASPAPAQ 263
+++ + S+ +S P A +S PTS+ G +P + + + + S +P
Sbjct: 1186 DSKTQVATSTEASSPPPTAEVTSMPTSTPGERSTPLTSMPVRHTPVASSEASTLSTSPVD 1245
Query: 264 AQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVP-PLTPALRTLAES 322
TP A SS +P E L + S+G P++ L T E+
Sbjct: 1246 TSTPVTTSAETSS-SPTTAEG---------TSLPTSTTSEGSTLLTSIPVSTTLVTSPEA 1295
Query: 323 LKAKALP-PAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPP 369
P G V+ +E + SP +P S + T S P
Sbjct: 1296 STLLTTPVDTKGPVVTSNEVSSSPTPAEGTSMPTSTYSEGRTPLTSIP 1343
Score = 35.0 bits (79), Expect = 0.13
Identities = 81/359 (22%), Positives = 133/359 (37%), Gaps = 72/359 (20%)
Query: 37 TLSPSRSQRSRLPQAPKALATGPNSPELFEESWPSSSGTP---SLPSTTEGQMWASPAPT 93
T+ + S+ S L P +T P SSS TP S+P++T + ++P
Sbjct: 520 TMPVASSEASTLSTTPVDTST----PVTTSSEASSSSTTPEGTSIPTSTPSE-GSTPLTN 574
Query: 94 LIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPE 153
+ S VV+ E TPAD + S + SS S A E
Sbjct: 575 MPVSTRLVVSS--------------EASTTSTTPADSNTFVTTSSEASSSSTTA-----E 615
Query: 154 GRPHTAVPTAV----NVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRS 209
G T++PT+ T S +V+ T +++ +D T
Sbjct: 616 G---TSMPTSTYSERGTTITSMSVSTTLVASSEASTLSTTPVDSNT-------------- 658
Query: 210 KASISSSSSLSPSDASTSSFPTSS--DGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTP 267
+ S+ ++ S + A +S PTS+ +G +P + + + + S P TP
Sbjct: 659 PVTTSTEATSSSTTAEGTSMPTSTYTEGSTPLTSMPVNTTLVASSEASTLSTTPVDTSTP 718
Query: 268 TPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLT--PALRTLAESLKA 325
ASS +P + + + S+G PLT P +TL S +A
Sbjct: 719 VTTSTEASS-SPTTADG---------ASMPTSTPSEGS----TPLTSMPVSKTLLTSSEA 764
Query: 326 KALP----PAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPA--FQVGSPEA 378
L + + +EA+ SP +P+S + + + S P V SPEA
Sbjct: 765 STLSTTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSIPVSITPVTSPEA 823
Score = 34.7 bits (78), Expect = 0.17
Identities = 51/242 (21%), Positives = 92/242 (38%), Gaps = 44/242 (18%)
Query: 46 SRLPQAPKALATGPNSPELFEESWPSSSGTP--SLPSTTEGQMWASPAPTLIDSG-DSVV 102
S P A +T +P + S P ++ T S P+T EG P+ + + S++
Sbjct: 2877 STTPVASSEASTLSTTP--VDTSIPVTTSTEGSSSPTTAEGTSMPISTPSEVSTPLTSIL 2934
Query: 103 AKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPT 162
+ P + E TP D + P + SA A ++ P TA T
Sbjct: 2935 VSTV-------PVAGSEASTLSTTPVD-------TRTPVTTSAEASSS-----PTTAEGT 2975
Query: 163 AVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKA------SISSS 216
++ +++ PL + + T+ + S A L R+ A + S+
Sbjct: 2976 SMPISTPGERRTPLTS------------MSVSTMPVASSEASTLSRTPADTSTPVTTSTE 3023
Query: 217 SSLSPSDASTSSFP--TSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPA 274
+S SP+ A + P T S+G +P + + + + + S P + +P
Sbjct: 3024 ASSSPTTAEGTGIPISTPSEGSTPLTSIPVSTTPVAIPEASTLSTTPVDSNSPVVTSTEV 3083
Query: 275 SS 276
SS
Sbjct: 3084 SS 3085
Score = 33.1 bits (74), Expect = 0.49
Identities = 63/308 (20%), Positives = 111/308 (36%), Gaps = 26/308 (8%)
Query: 112 AQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSASH 171
+ PT+ E+ A TP++ + P ++ A++ A+ P V + VT+++
Sbjct: 432 SSPTTAEDTSIATSTPSEGSTPLTSMPVSTTPVASSEASNLSTTP---VDSKTQVTTSTE 488
Query: 172 AVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSFPT 231
A + + N ++ L+ S + + S+AS S++ + S T+S
Sbjct: 489 ASSSPPTAEVNSMPTSTPSEGSTPLTSMSVSTMPVASSEASTLSTTPVDTSTPVTTSSEA 548
Query: 232 SSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWR 291
SS +P T IP S+ G P + P + + A +S P +
Sbjct: 549 SSSSTTP-EGTSIPTSTPSEG-STPLTNMPVSTRLVVSSEASTTSTTPADSNTFVTTSSE 606
Query: 292 QRRKLEQAQGSK------GDRAWVPPLTPALRTLAESLKAKAL--------PPAAGSVIR 337
A+G+ +R TL S +A L P S
Sbjct: 607 ASSSSTTAEGTSMPTSTYSERGTTITSMSVSTTLVASSEASTLSTTPVDSNTPVTTSTEA 666
Query: 338 KSEATPSPGACL------QPEVPLSPAEQATTVKASPPAFQVG-SPEALAPPPPAADHAP 390
S +T + G + + PL+ TT+ AS A + +P + P + A
Sbjct: 667 TSSSTTAEGTSMPTSTYTEGSTPLTSMPVNTTLVASSEASTLSTTPVDTSTPVTTSTEAS 726
Query: 391 SEALLAQG 398
S A G
Sbjct: 727 SSPTTADG 734
Score = 31.6 bits (70), Expect = 1.4
Identities = 65/296 (21%), Positives = 106/296 (35%), Gaps = 38/296 (12%)
Query: 6 PVFSIQDSPFGDAPLGRSHYWPSQSQTWCPKTLSPSRSQRSRLPQAPKALATGP------ 59
PV S + S P+ S + T +LSP+ ++ + +P + + T P
Sbjct: 3351 PVVSSEASTLSTTPVDTS----TPVTTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMPV 3406
Query: 60 -NSPELFEE-----SWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFR--- 110
+P + E + P S T ST AS +PT+ + G S+ +
Sbjct: 3407 STTPVVSSEVNTLSTTPVDSNTLVTTSTE-----ASSSPTIAE-GTSLPTSTTSEGSTPL 3460
Query: 111 -----QAQPTSREERQPAGPTPADFWW-LQSDSPDPSSQSAAAGANKP-----EGR-PHT 158
P + E TP D + + SP SS + A + P EG P T
Sbjct: 3461 SIMPLSTTPVASSEASTLSTTPVDTSTPVTTSSPTNSSPTTAEVTSMPTSTAGEGSTPLT 3520
Query: 159 AVPTAVNVTSASHA-VAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSS 217
+P + ++S A + N +SS +LQ R+ S+ S S ++
Sbjct: 3521 NMPVSTTPVASSEASTLSTTPVDSNTFVTSSSQASSSPATLQVTTMRMSTPSEGSSSLTT 3580
Query: 218 SLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAP 273
L S TSS ++ S T + S++ P TP+ P
Sbjct: 3581 MLLSSTYVTSSEASTPSTPSVDRSTPVTTSTQSNSTPTPPEVITLPMSTPSEVSTP 3636
Score = 30.4 bits (67), Expect = 3.2
Identities = 53/286 (18%), Positives = 99/286 (34%), Gaps = 19/286 (6%)
Query: 6 PVFSIQDSPFGDAPLGRSHYWPSQSQTWCPKTLSPSRSQRSRLPQAPKALATGPNSPELF 65
P +S +P PL + S++ T + S + + G S
Sbjct: 1978 PAYSEGSTPLTSMPLSTTLVVSSEASTLSTTPVDTSTPATTSTEGSSSPTTAGGTS---I 2034
Query: 66 EESWPSSSGTP--SLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPA 123
+ S PS TP +P +T + +S TL + + N + + E
Sbjct: 2035 QTSTPSERTTPLAGMPVSTT-LVVSSEGNTLSTTPVDSKTQVTNSTEASSSATAEGSSMT 2093
Query: 124 GPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNL 183
P++ L + P ++ A+ A+ P + + T S + P +
Sbjct: 2094 ISAPSEGSPLLTSIPLSTTPVASPEASTLSTTPVDSNSPVITSTEVSSSPIPTEGTSMQT 2153
Query: 184 HTWNS-----SLLDLETLSLQSRAARLLKRSKASISS------SSSLSPSDASTSSFPTS 232
T++ + + + T + S A L + S+ + SP+ + +S PTS
Sbjct: 2154 STYSDRRTPLTSMPVSTTVVASSAISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSMPTS 2213
Query: 233 --SDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASS 276
S+G +PF+ + + S P TP A+S
Sbjct: 2214 TPSEGSTPFTSMPVSTMPVVTSEASTLSATPVDTSTPVTTSTEATS 2259
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 51.2 bits (121), Expect = 2e-06
Identities = 102/453 (22%), Positives = 154/453 (33%), Gaps = 72/453 (15%)
Query: 9 SIQDSPFGDAPLGRSHYWPSQSQTWCPKTLSPSRSQRSRLPQA------PKALATGPNSP 62
S+ D P D LG + W + +PS+ Q + P+A A P
Sbjct: 1949 SLTDIPTEDEALGTPETGAATPMDWQEQGRAPSQDQEAPSPEALPSPGQEPAAGASPRRG 2008
Query: 63 ELFEESWPSSSGTPSLP----------STTEGQMWASPAP--TLIDSGDSVVAKYINRFR 110
EL S S+ + P ++ E SP+P T + G +Y R +
Sbjct: 2009 ELRRGSSAESALPRAGPRELGRGLHKAASVELPQRRSPSPGATRLARGGLGEGEYAQRLQ 2068
Query: 111 QAQPT----SREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNV 166
+ E+ + +G L + DP AA+ E PH P
Sbjct: 2069 ALRQRLLRGGPEDGKVSGLRGPLLESLGGRARDPRMARAASS----EAAPHHQPPLENRG 2124
Query: 167 TSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDAST 226
S + + + + H + L++ L AR L+ S S+S+ S PS +
Sbjct: 2125 LQKSSSFSQGEAEPRGRHRRAGAPLEIPVARL---GARRLQESP-SLSALSEAQPSSPAR 2180
Query: 227 SSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDI 286
S P S S P + P+ PA P PAQ + P P P P + P P +
Sbjct: 2181 PSAPKPSTPKSAEPSATTPSDA----PQPPA-PQPAQDKAPEPRPEPVRASKPAPPPQAL 2235
Query: 287 LYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAE-SLKAKALPPAAGSVIRKSEATPSP 345
+ PLTP + + L A P+ G SE P P
Sbjct: 2236 -------------------QTLALPLTPYAQIIQSLQLSGHAQGPSQGPAAPPSE--PKP 2274
Query: 346 GACLQPEV---PLSPAEQATTVKASPPAFQVGSPEALAPPPPAA------DHAPSEALL- 395
A + V P E+ PP + PP P + ++ SEA+
Sbjct: 2275 HAAVFARVASPPPGAPEKRVPSAGGPPVLAEKARVPTVPPRPGSSLSSSIENLESEAVFE 2334
Query: 396 -----AQGRPAAAGCRRLRRQRVPGRSRAAGAK 423
++ P + G R L R R R GA+
Sbjct: 2335 AKFKRSRESPLSLGLRLLSRSRSEERGPFRGAE 2367
Score = 43.5 bits (101), Expect = 4e-04
Identities = 44/165 (26%), Positives = 64/165 (38%), Gaps = 17/165 (10%)
Query: 238 PFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLE 297
P +P S +G R+P P A TPT +Q P+ PED + R ++
Sbjct: 303 PSKSALLPPPSPRVGKRSPPGPPAQPAATPT--SPHRRTQEPVLPEDTTTEEKRGKKSKS 360
Query: 298 QAQGSKGDRAWVP--PLTPALRTLAESLKAKALPPAAGSVI----------RKSEATPSP 345
G P PL+ A L+ ++ L A ++ R E + SP
Sbjct: 361 SGPSLAGTAESRPQTPLSEASGRLSALGRSPRLVRAGSRILDKLQFFEERRRSLERSDSP 420
Query: 346 GACLQPEVPLSPA---EQATTVKASPPAFQVGSPEALAPPPPAAD 387
A L+P VPL A EQ + + +P S E L P A+
Sbjct: 421 PAPLRPWVPLRKARSLEQPKSERGAPWGTPGASQEELRAPGSVAE 465
Score = 35.0 bits (79), Expect = 0.13
Identities = 75/326 (23%), Positives = 127/326 (38%), Gaps = 43/326 (13%)
Query: 35 PKTLSPSRSQRSRLPQAPKALATGPNSPELFEESWPSSSGT----PSLP-STTEGQMWA- 88
P S +R++ P P+ T + + S PS +GT P P S G++ A
Sbjct: 328 PAATPTSPHRRTQEPVLPEDTTTEEKRGKKSKSSGPSLAGTAESRPQTPLSEASGRLSAL 387
Query: 89 SPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAG 148
+P L+ +G ++ K +F + + S E R + P P W + + G
Sbjct: 388 GRSPRLVRAGSRILDKL--QFFEERRRSLE-RSDSPPAPLRPWVPLRKARSLEQPKSERG 444
Query: 149 ANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLS------LQSRA 202
A P G P + A +VA + + Q ++ LD T L+ R
Sbjct: 445 A--PWGTPGASQEEL----RAPGSVAERRRLFQQ----KAASLDERTRQRSPASDLELRF 494
Query: 203 ARLLKRSKASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPA 262
A+ L R + S S + ++ ++ + P P S+ P+ + +PA
Sbjct: 495 AQELGRIRRSTSREELVRSHESLRATLQRAPSPREPGEP---PLFSRPSTPKTSRAVSPA 551
Query: 263 QAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVP-----PLTPALR 317
AQ P+P+ A P RP R R + + +G + V PLT + R
Sbjct: 552 AAQPPSPSSAEKPGDEPGRP--------RSRGPAGRTEPGEGPQQEVRRRDQFPLTRS-R 602
Query: 318 TLAESLKAKALPPAAGSVIRKSEATP 343
+ E ++ PPAA +++A P
Sbjct: 603 AIQE-CRSPVPPPAADPPEARTKAPP 627
Score = 33.5 bits (75), Expect = 0.38
Identities = 38/142 (26%), Positives = 52/142 (36%), Gaps = 17/142 (11%)
Query: 255 APASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRA-WVPPLT 313
AP + PA+A+ P + A AP P + +Q +A PP T
Sbjct: 2785 APVTSRPARARPPDSPTSLAPPLAPAAPTPPSVTVSPSSPPTPPSQALSSLKAVGPPPQT 2844
Query: 314 PALRTLAESLKAKALPPAAGSVIRKSE--------ATPSPGACLQPEVPLS---PAEQAT 362
P R A P + + SE TP P + Q P+S P T
Sbjct: 2845 PPRRHRGLQAARPAEPTLPSTHVTPSEPKPFVLDTGTPIPASTPQGVKPVSSSTPVYVVT 2904
Query: 363 TVKASPPAFQVGSPEALAPPPP 384
+ ++PPA PE AP PP
Sbjct: 2905 SFVSAPPA-----PEPPAPEPP 2921
Score = 32.0 bits (71), Expect = 1.1
Identities = 74/329 (22%), Positives = 112/329 (34%), Gaps = 75/329 (22%)
Query: 111 QAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSAS 170
Q Q S R+PA P P+ L SP G P G P A P A +
Sbjct: 287 QPQLASEAPRRPAQPPPSKSALLPPPSP-------RVGKRSPPGPP--AQPAATPTSPHR 337
Query: 171 HAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSP-SDASTSSF 229
P+ E + + + + K S S++ ++ P + S +S
Sbjct: 338 RTQEPVLP---------------EDTTTEEKRGKKSKSSGPSLAGTAESRPQTPLSEASG 382
Query: 230 PTSSDGLSPF----------SETFIPDSSKGLGPRAPASPAPAQAQTP------------ 267
S+ G SP F + + L R+ + PAP + P
Sbjct: 383 RLSALGRSPRLVRAGSRILDKLQFFEERRRSL-ERSDSPPAPLRPWVPLRKARSLEQPKS 441
Query: 268 ---TPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGD---RAWVPPLTPALRTLAE 321
P P +SQ LR + +RR+L Q + + D R P LR E
Sbjct: 442 ERGAPWGTPGASQEELRAPGSVA----ERRRLFQQKAASLDERTRQRSPASDLELRFAQE 497
Query: 322 ------SLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQVGS 375
S + L + S+ + PSP +P + P+ T+ SP A Q
Sbjct: 498 LGRIRRSTSREELVRSHESLRATLQRAPSPREPGEPPLFSRPSTPKTSRAVSPAAAQ--- 554
Query: 376 PEALAPPPPAADHAPSEALLAQGRPAAAG 404
PP P++ P + GRP + G
Sbjct: 555 -----PPSPSSAEKPGD---EPGRPRSRG 575
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 50.8 bits (120), Expect = 2e-06
Identities = 86/379 (22%), Positives = 133/379 (35%), Gaps = 82/379 (21%)
Query: 27 PSQSQTWCPKTLSPSRSQRSRLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQM 86
P+QSQ + + Q LP + A+ P+ L + + P+++ + P T
Sbjct: 567 PTQSQPAPAGPAATTVLQGVTLPPSAVAMLNTPDG--LVQPATPAAATGEAAPVLT---- 620
Query: 87 WASPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAA 146
PAP + + + + + + QP P PTP Q+ +P PS A+
Sbjct: 621 -VQPAPQAPPAVSTPLPLGLQQPQAQQP-------PQAPTPQAAAPPQATTPQPSPGLAS 672
Query: 147 AGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLL 206
+ G+P +A PTA+ + P + +Q L
Sbjct: 673 SPEKIVLGQPPSATPTAILTQDSLQMFLPQERSQQPL----------------------- 709
Query: 207 KRSKASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAP---ASPAPAQ 263
S P+ S+ P + D P T + + GLGP+AP ASPAPA
Sbjct: 710 -----SAEGPHLSVPASVIVSAPPPAQD---PAPATPVAKGA-GLGPQAPDSQASPAPAP 760
Query: 264 AQTPTPAP--APASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAE 321
Q P AP P S +P P Q GD +P P
Sbjct: 761 -QIPAAAPLKGPGPSSSPSLPH----------------QAPLGDSPHLPSPHPT------ 797
Query: 322 SLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQVGSPEALAP 381
+ + PP+ + + + P C P+ P P V + Q+G P +
Sbjct: 798 --RPPSRPPSRPQSVSRPPSEPPLHPCPPPQAP--PTLPGIFVIQN----QLGVPPPASN 849
Query: 382 PPPAADHAPSEALLAQGRP 400
P P A P L Q +P
Sbjct: 850 PAPTAPGPPQPPLRPQSQP 868
Score = 41.6 bits (96), Expect = 0.001
Identities = 70/297 (23%), Positives = 107/297 (36%), Gaps = 53/297 (17%)
Query: 18 APLGRSHYWPSQSQTWCPKTLSPSRSQRSRLPQAPKAL------ATGPNSPELF------ 65
APLG S + PS T P + PSR Q P + L P P +F
Sbjct: 783 APLGDSPHLPSPHPTR-PPSRPPSRPQSVSRPPSEPPLHPCPPPQAPPTLPGIFVIQNQL 841
Query: 66 ------EESWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFRQAQPTSREE 119
P++ G P P + Q P P S + + A +
Sbjct: 842 GVPPPASNPAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPPSSTSSAV-----ASSSETSS 896
Query: 120 RQPAGPTPADFWWL--------QSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSASH 171
R PA PTP+DF +S +P P+ A P P T VT+
Sbjct: 897 RLPA-PTPSDFQLQFPPSQGPHKSPTPPPTLHLVPEPAAPPPPPPRTFQM----VTTPFP 951
Query: 172 AVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSF-- 229
A+ + + + H S ++ LQ++A + A+ +S+SL P + +S
Sbjct: 952 ALPQPKALLERFHQVPSGII------LQNKAGG----APAAPQTSTSLGPLTSPAASVLV 1001
Query: 230 ----PTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRP 282
P+ + + P ++ GL P PA + PT A A+S P +P
Sbjct: 1002 SGQAPSGTPTAPSHAPAPAPMAATGLPPLLPAENKAFASNLPTLNVAKAASSGPGKP 1058
Score = 38.9 bits (89), Expect = 0.009
Identities = 42/156 (26%), Positives = 63/156 (40%), Gaps = 15/156 (9%)
Query: 256 PASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPA 315
P S P A A S AP++ L+Q + A GS ++ P PA
Sbjct: 523 PLSLGPVLAPHSGAHSAHILSAAPIQVGQPALFQM----PVSLAAGSLPTQSQPAPAGPA 578
Query: 316 LRTLAESLKAKALPPAAGSVIRKSE-----ATPSPGAC-LQPEVPLSPAEQATTVKASPP 369
T+ L+ LPP+A +++ + ATP+ P + + PA QA ++P
Sbjct: 579 ATTV---LQGVTLPPSAVAMLNTPDGLVQPATPAAATGEAAPVLTVQPAPQAPPAVSTPL 635
Query: 370 AFQVGSPEALAPP--PPAADHAPSEALLAQGRPAAA 403
+ P+A PP P AP +A Q P A
Sbjct: 636 PLGLQQPQAQQPPQAPTPQAAAPPQATTPQPSPGLA 671
Score = 38.1 bits (87), Expect = 0.015
Identities = 87/393 (22%), Positives = 146/393 (37%), Gaps = 60/393 (15%)
Query: 35 PKTLSPS------RSQRSRLPQAPKA------LATGPNSPELFEESWPSSSGTPSL---- 78
PK +P+ + + LPQ PKA +A G + +P+ + ++
Sbjct: 368 PKPFAPAGATLTIQGEPGALPQQPKAPQNLTFMAAGKAGQNVVLSGFPAPALQANVFKQP 427
Query: 79 PSTTEGQMWASPAPT----------LIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPA 128
P+TT G A P P L++ G S+V + P + P P
Sbjct: 428 PATTTGA--APPQPPGALSKPMSVHLLNQGSSIVIPA----QHMLPGQNQFLLPGAPAVQ 481
Query: 129 DFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVN-VTSASHAVAPLQ---EIKQNLH 184
L + + Q AA A PHT N + + + PL + +
Sbjct: 482 LPQQLSALPANVGGQILAAAA------PHTGGQLIANPILTNQNLAGPLSLGPVLAPHSG 535
Query: 185 TWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSFPTSSDGLSPFSETFI 244
++ +L + + A + S A+ S + P+ A ++ P S +
Sbjct: 536 AHSAHILSAAPIQVGQPALFQMPVSLAAGSLPTQSQPAPAGPAATTVLQGVTLPPSAVAM 595
Query: 245 PDSSKGLGPRAPASPAPAQAQ-----TPTPAP-APASSQAPLRPEDDILYQWRQRRKLEQ 298
++ GL PA+PA A + T PAP AP + PL P Q +Q +
Sbjct: 596 LNTPDGLVQ--PATPAAATGEAAPVLTVQPAPQAPPAVSTPL-PLGLQQPQAQQPPQAPT 652
Query: 299 AQGSKGDRAWVPPLTPALRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPA 358
Q + +A P +P L + E + P A + I ++ LQ +P +
Sbjct: 653 PQAAAPPQATTPQPSPGLASSPEKIVLGQPPSATPTAILTQDS-------LQMFLPQERS 705
Query: 359 EQATTVKASPPAFQVGSPEALAPPPPAADHAPS 391
+Q + A P V + ++ PPPA D AP+
Sbjct: 706 QQP--LSAEGPHLSVPASVIVSAPPPAQDPAPA 736
Score = 35.4 bits (80), Expect = 0.099
Identities = 101/436 (23%), Positives = 154/436 (35%), Gaps = 74/436 (16%)
Query: 6 PVFSIQDSPFGDAPLGRSHYWPSQSQTWCPKTLSPSRSQRSRLPQAPKALATGPNSPELF 65
PV ++Q +P AP P+ S P L + Q + PQAP A P
Sbjct: 617 PVLTVQPAP--QAP-------PAVST---PLPLGLQQPQAQQPPQAPTPQAAAPP----- 659
Query: 66 EESWPSSSGTPSLPSTTEGQMWASP---APTLIDSGDSVVAKYINRFRQAQPTSREERQ- 121
+ + P S P L S+ E + P PT I + DS+ ++ + R QP S E
Sbjct: 660 QATTPQPS--PGLASSPEKIVLGQPPSATPTAILTQDSL-QMFLPQERSQQPLSAEGPHL 716
Query: 122 --PAG-----PTPADFWWLQSDSP-DPSSQSAAAGANKPEGR----PHTAVPTAVNVTSA 169
PA P PA Q +P P ++ A G P+ + P +P A +
Sbjct: 717 SVPASVIVSAPPPA-----QDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGP 771
Query: 170 SHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSF 229
+ +P + +S L + +S + S L P +
Sbjct: 772 GPSSSP--SLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQSVSRPPSEPPLHPCPPPQAP- 828
Query: 230 PTSSDGLSPFSETFIPDSSKGLGPRAPASPAPA---QAQTPT----PAP----------- 271
PT ++ +P + P AP P P Q+Q P PAP
Sbjct: 829 PTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPPSSTSSAV 888
Query: 272 ---APASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVP----PLTPALRTLAESLK 324
+ SS+ P D Q+ + ++ VP P P RT
Sbjct: 889 ASSSETSSRLPAPTPSDFQLQFPPSQGPHKSPTPPPTLHLVPEPAAPPPPPPRTFQMVTT 948
Query: 325 AKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVK----ASPPAFQVGSPEALA 380
P +++ + PS G LQ + +PA T+ SP A + S +A +
Sbjct: 949 PFPALPQPKALLERFHQVPS-GIILQNKAGGAPAAPQTSTSLGPLTSPAASVLVSGQAPS 1007
Query: 381 PPPPAADHAPSEALLA 396
P A HAP+ A +A
Sbjct: 1008 GTPTAPSHAPAPAPMA 1023
Score = 35.0 bits (79), Expect = 0.13
Identities = 49/172 (28%), Positives = 64/172 (37%), Gaps = 21/172 (12%)
Query: 252 GPRAPASPAPAQAQTPTPAPAPASSQ-------APLRPEDDILYQWRQR-----RKLEQA 299
GP AP +A+ +PAP PA L +D LYQ + A
Sbjct: 1397 GPGAPEGTPAGRARGGSPAPLPAKVDEATSGLIRELAAVEDELYQRMLKGPPPEPAASAA 1456
Query: 300 QGSKGDRAW-VPPLTPALRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPA 358
QG+ GD W P L PA R +ES ++ S + T + + + L A
Sbjct: 1457 QGT-GDPDWEAPGLPPAKRRKSESPDVDQASFSSDSP-QDDTLTEHLQSAIDSILNLQQA 1514
Query: 359 EQATTVKASPPAFQVGSPEALAPPPPAADHAPSEALLAQGRPAAAGCRRLRR 410
T + P A G+P A PPP H P EA G R L R
Sbjct: 1515 PGRTPAPSYPHAASAGTP---ASPPPL--HRP-EAYPPSSHNGGLGARTLTR 1560
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 50.4 bits (119), Expect = 3e-06
Identities = 99/380 (26%), Positives = 134/380 (35%), Gaps = 47/380 (12%)
Query: 48 LPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDSV-VAKYI 106
+P P A GP P+ E P S PS PST P P L++ +A
Sbjct: 139 IPPPPPGPAPGP--PQDISEP-PGGSPLPSPPSTAP-----PPPPLLLEPPPPPSMAPPP 190
Query: 107 NRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNV 166
+A P+ PTP DF P + A A P P A P +
Sbjct: 191 PPVLEALSPPHTLSSPSIPTPPDFI--------PPAPPLAFLAPPPPPVPAPAPPAPASP 242
Query: 167 TSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDAST 226
+ + P + + W S D+ Q+ A R + S+L P+
Sbjct: 243 HTVGTRLFPPGGVTK----WKS---DVALNGRQAEATRASPPRSPAEPKGSALGPNPEPH 295
Query: 227 SSFPTSSD--GLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPA-----PASSQAP 279
+FP S +P + IP PR A +A + P P PAS P
Sbjct: 296 LTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEG-ATKKAPSRLPLPPSFHIRPASQVYP 354
Query: 280 LR-PEDDILYQWRQRR----KLEQAQGSKGDRAWVPPLTPALRTLAESL--KAKALPPAA 332
R PE D + + +L Q+Q +RA PP P L A L A LPPAA
Sbjct: 355 DRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPAA 414
Query: 333 GSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQVGSPEALAPPPPAADHAPSE 392
+ +A P + SPA + K +PP SPE A P PS+
Sbjct: 415 PPLPCAQKAAHPPAGFTKTPKSSSPALKP---KPNPP-----SPENTASSAPVDWRDPSQ 466
Query: 393 ALLAQGRPAAAGCRRLRRQR 412
+ AA C R R
Sbjct: 467 MEKLRNELAAYLCGSRREDR 486
Score = 33.1 bits (74), Expect = 0.49
Identities = 47/171 (27%), Positives = 63/171 (36%), Gaps = 39/171 (22%)
Query: 236 LSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRK 295
L P S T +P +S L P+A PA TP PA P ++ P P
Sbjct: 618 LPPQSTTLLPTTS--LQPKAMLGPAIPPKATPEPAIPPKATLWPATP------------- 662
Query: 296 LEQAQGSKGDRAWVPPLTPALRTLAESLKAKALPPAAGSVIRKSEAT-PSPGACLQPEVP 354
+A + P TP T + KA +G I + T P+ + L E
Sbjct: 663 ---------PKATLGPATPLKATSGPTTPLKA---TSGPAIASTATTLPTTTSQLMAEKD 710
Query: 355 LSPAEQATTVKASPPAFQVGSPEALAPPPPAADHAPSEA--LLAQGRPAAA 403
PA Q PA S E P + +PSEA L QG ++A
Sbjct: 711 SGPAGQ-----PEKPA----SQEVSTPSQARGEGSPSEATRLPTQGARSSA 752
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 50.4 bits (119), Expect = 3e-06
Identities = 99/380 (26%), Positives = 134/380 (35%), Gaps = 47/380 (12%)
Query: 48 LPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDSV-VAKYI 106
+P P A GP P+ E P S PS PST P P L++ +A
Sbjct: 139 IPPPPPGPAPGP--PQDISEP-PGGSPLPSPPSTAP-----PPPPLLLEPPPPPSMAPPP 190
Query: 107 NRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNV 166
+A P+ PTP DF P + A A P P A P +
Sbjct: 191 PPVLEALSPPHTLSSPSIPTPPDFI--------PPAPPLAFLAPPPPPVPAPAPPAPASP 242
Query: 167 TSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDAST 226
+ + P + + W S D+ Q+ A R + S+L P+
Sbjct: 243 HTVGTRLFPPGGVTK----WKS---DVALNGRQAEATRASPPRSPAEPKGSALGPNPEPH 295
Query: 227 SSFPTSSD--GLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPA-----PASSQAP 279
+FP S +P + IP PR A +A + P P PAS P
Sbjct: 296 LTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEG-ATKKAPSRLPLPPSFHIRPASQVYP 354
Query: 280 LR-PEDDILYQWRQRR----KLEQAQGSKGDRAWVPPLTPALRTLAESL--KAKALPPAA 332
R PE D + + +L Q+Q +RA PP P L A L A LPPAA
Sbjct: 355 DRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPAA 414
Query: 333 GSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQVGSPEALAPPPPAADHAPSE 392
+ +A P + SPA + K +PP SPE A P PS+
Sbjct: 415 PPLPCAQKAAHPPAGFTKTPKSSSPALKP---KPNPP-----SPENTASSAPVDWRDPSQ 466
Query: 393 ALLAQGRPAAAGCRRLRRQR 412
+ AA C R R
Sbjct: 467 MEKLRNELAAYLCGSRREDR 486
Score = 33.1 bits (74), Expect = 0.49
Identities = 47/171 (27%), Positives = 63/171 (36%), Gaps = 39/171 (22%)
Query: 236 LSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRK 295
L P S T +P +S L P+A PA TP PA P ++ P P
Sbjct: 618 LPPQSTTLLPTTS--LQPKAMLGPAIPPKATPEPAIPPKATLWPATP------------- 662
Query: 296 LEQAQGSKGDRAWVPPLTPALRTLAESLKAKALPPAAGSVIRKSEAT-PSPGACLQPEVP 354
+A + P TP T + KA +G I + T P+ + L E
Sbjct: 663 ---------PKATLGPATPLKATSGPTTPLKA---TSGPAIASTATTLPTTTSQLMAEKD 710
Query: 355 LSPAEQATTVKASPPAFQVGSPEALAPPPPAADHAPSEA--LLAQGRPAAA 403
PA Q PA S E P + +PSEA L QG ++A
Sbjct: 711 SGPAGQ-----PEKPA----SQEVSTPSQARGEGSPSEATRLPTQGARSSA 752
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 50.4 bits (119), Expect = 3e-06
Identities = 99/380 (26%), Positives = 134/380 (35%), Gaps = 47/380 (12%)
Query: 48 LPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDSV-VAKYI 106
+P P A GP P+ E P S PS PST P P L++ +A
Sbjct: 139 IPPPPPGPAPGP--PQDISEP-PGGSPLPSPPSTAP-----PPPPLLLEPPPPPSMAPPP 190
Query: 107 NRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNV 166
+A P+ PTP DF P + A A P P A P +
Sbjct: 191 PPVLEALSPPHTLSSPSIPTPPDFI--------PPAPPLAFLAPPPPPVPAPAPPAPASP 242
Query: 167 TSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDAST 226
+ + P + + W S D+ Q+ A R + S+L P+
Sbjct: 243 HTVGTRLFPPGGVTK----WKS---DVALNGRQAEATRASPPRSPAEPKGSALGPNPEPH 295
Query: 227 SSFPTSSD--GLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPA-----PASSQAP 279
+FP S +P + IP PR A +A + P P PAS P
Sbjct: 296 LTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEG-ATKKAPSRLPLPPSFHIRPASQVYP 354
Query: 280 LR-PEDDILYQWRQRR----KLEQAQGSKGDRAWVPPLTPALRTLAESL--KAKALPPAA 332
R PE D + + +L Q+Q +RA PP P L A L A LPPAA
Sbjct: 355 DRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPAA 414
Query: 333 GSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQVGSPEALAPPPPAADHAPSE 392
+ +A P + SPA + K +PP SPE A P PS+
Sbjct: 415 PPLPCAQKAAHPPAGFTKTPKSSSPALKP---KPNPP-----SPENTASSAPVDWRDPSQ 466
Query: 393 ALLAQGRPAAAGCRRLRRQR 412
+ AA C R R
Sbjct: 467 MEKLRNELAAYLCGSRREDR 486
Score = 33.1 bits (74), Expect = 0.49
Identities = 47/171 (27%), Positives = 63/171 (36%), Gaps = 39/171 (22%)
Query: 236 LSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRK 295
L P S T +P +S L P+A PA TP PA P ++ P P
Sbjct: 618 LPPQSTTLLPTTS--LQPKAMLGPAIPPKATPEPAIPPKATLWPATP------------- 662
Query: 296 LEQAQGSKGDRAWVPPLTPALRTLAESLKAKALPPAAGSVIRKSEAT-PSPGACLQPEVP 354
+A + P TP T + KA +G I + T P+ + L E
Sbjct: 663 ---------PKATLGPATPLKATSGPTTPLKA---TSGPAIASTATTLPTTTSQLMAEKD 710
Query: 355 LSPAEQATTVKASPPAFQVGSPEALAPPPPAADHAPSEA--LLAQGRPAAA 403
PA Q PA S E P + +PSEA L QG ++A
Sbjct: 711 SGPAGQ-----PEKPA----SQEVSTPSQARGEGSPSEATRLPTQGARSSA 752
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 50.1 bits (118), Expect = 4e-06
Identities = 90/390 (23%), Positives = 135/390 (34%), Gaps = 63/390 (16%)
Query: 30 SQTWCPKTLSPSRSQRSRLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMWAS 89
S W ++ ++ P+ P AT ++PE + + S TP P AS
Sbjct: 952 SPEWAALAITVPITEEDGTPEGPVTPATTVHAPEEPDTAAVRVS-TPEEP--------AS 1002
Query: 90 PAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGA 149
PA A PT E PA P +P+S +AA
Sbjct: 1003 PAA-------------------AVPTPEEPTSPAAAVPTP--------EEPTSPAAAVPP 1035
Query: 150 NKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRS 209
+ P AVPT TS + AV +E S + T + A +
Sbjct: 1036 PEEPTSPAAAVPTPEEPTSPAAAVPTPEEP-------TSPAAAVPTPEEPTSPAAAVPTP 1088
Query: 210 KASISSSSSLSPSDASTS---SFPTSSDGLSPFSETFIPDSSKGLG-----PRAPASPAP 261
+ S ++++ + TS + PT + SP + P+ P PA PAP
Sbjct: 1089 EEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAP 1148
Query: 262 AQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAE 321
A PTP + +++ A PE+ E A + P +PA
Sbjct: 1149 A---VPTPEESASAAVAVPTPEESASPAAAVPTPAESASFAAVVATLEEPTSPAASVPTP 1205
Query: 322 SLKAKALPP---AAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKA-SPPAFQVGSPE 377
+ L A SV E A PE P SPA T++ + A V +PE
Sbjct: 1206 AAMVATLEEFTSPAASVPTSEEPASLAAAVSNPEEPTSPAAAVPTLEEPTSSAAAVLTPE 1265
Query: 378 ALA-----PPPPAADHAPSEALLAQGRPAA 402
L+ P P +P+ A+ PA+
Sbjct: 1266 ELSSPAASVPTPEEPASPAAAVSNLEEPAS 1295
Score = 38.5 bits (88), Expect = 0.012
Identities = 66/318 (20%), Positives = 108/318 (33%), Gaps = 39/318 (12%)
Query: 117 REERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGR---------PHTAV------- 160
R R A PT D L + P P ++ A PEG PH +
Sbjct: 833 RPSRTAAVPTVKDA--LDAALPSPEEGTSIAAVPAPEGTAVVAALVPFPHEDILVASIVS 890
Query: 161 -----PTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISS 215
TA V++ A P + T + + + + AA + + ++++
Sbjct: 891 LEEEDVTAAAVSAPERATVPAVTVSVPEGTAAVAAVSSPEETAPAVAAAITQEGMSAVAG 950
Query: 216 SS----SLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRA--PASPAPAQAQTPTP 269
S +L+ + T T ++P + P+ R P PA A PTP
Sbjct: 951 FSPEWAALAITVPITEEDGTPEGPVTPATTVHAPEEPDTAAVRVSTPEEPASPAAAVPTP 1010
Query: 270 APAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVP----PLTPA--LRTLAESL 323
+ + A PE+ + + A VP P +PA + T E
Sbjct: 1011 EEPTSPAAAVPTPEEPT----SPAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPT 1066
Query: 324 KAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQVGSPEALAPPP 383
A P + A P+P P + E+ T+ A+ P + + A A P
Sbjct: 1067 SPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPT 1126
Query: 384 PAADHAPSEALLAQGRPA 401
P +P+ A+ PA
Sbjct: 1127 PEEPASPAAAVPTPEEPA 1144
Score = 35.0 bits (79), Expect = 0.13
Identities = 44/182 (24%), Positives = 66/182 (36%), Gaps = 29/182 (15%)
Query: 14 PFGDAPLGRSHYWPSQSQTWCPKTLSPSRSQRSRLPQAPKALATGPNSPELFEESWP--- 70
P + P + P+ + P P+ + P +P A P P + P
Sbjct: 1099 PTPEEPTSPAAAVPTPEEPASPAAAVPTPEE----PASPAAAVPTPEEPAFPAPAVPTPE 1154
Query: 71 -SSSGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAG--PTP 127
S+S ++P+ E A+ PT +S F T E PA PTP
Sbjct: 1155 ESASAAVAVPTPEESASPAAAVPTPAESAS---------FAAVVATLEEPTSPAASVPTP 1205
Query: 128 ADFWWLQSDSPDPSSQ--------SAAAGANKPEG--RPHTAVPTAVNVTSASHAVAPLQ 177
A + P++ S AA + PE P AVPT TS++ AV +
Sbjct: 1206 AAMVATLEEFTSPAASVPTSEEPASLAAAVSNPEEPTSPAAAVPTLEEPTSSAAAVLTPE 1265
Query: 178 EI 179
E+
Sbjct: 1266 EL 1267
>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
Length = 727
Score = 49.7 bits (117), Expect = 5e-06
Identities = 84/387 (21%), Positives = 134/387 (34%), Gaps = 57/387 (14%)
Query: 37 TLSPSRSQRSRLPQAPKALATGPNSPELFEESWPSSS----GTPSLPSTTEGQMWASPAP 92
T SP+ S+ S +A GP L ++ P + G +LP +++ + + +P
Sbjct: 141 TFSPAFSRPSAFSSLAEASDPGPPRASLRAKTSPEGARDLLGPKALPGSSQPRQYNNPIG 200
Query: 93 TLIDSGDSVVAKYINRFRQAQPTSREERQ-----PAGPTPADFWWLQSDSPDPSSQSAAA 147
A+ + Q S + P G P L DS P Q+
Sbjct: 201 LYS-------AETLREMAQMYQMSLRGKASGVGLPGGSLPIKD--LAVDSASPVYQAVIK 251
Query: 148 GANKPEGRPHTAVPTAVNVTSASHAVAP-------LQEIKQNLHTWNSSLLDLETLSLQS 200
NKPE + N+ S S + +Q+ + +S+ ++ +
Sbjct: 252 SQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEEALRRSSTPIEHAPVCTSQ 311
Query: 201 RAARLLKRSKASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASP- 259
LL AS ++ SPS AS ++ + T P SS PR AS
Sbjct: 312 ATTPLLP---ASAQPPAAASPSAASPPLATAAAHTAIASASTTAPASSPADSPRPQASSY 368
Query: 260 APAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTL 319
+PA A + PA + S+ P P + V ++
Sbjct: 369 SPAVAASSAPATHTSYSEGPAAP---------------------APKPRVVTTASIRPSV 407
Query: 320 AESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQVGSPEAL 379
+ + A P+ G+ + TPSP P SPA T SP SP
Sbjct: 408 YQPVPASTYSPSPGANYSPTPYTPSPAPAYTP----SPAPAYTP---SPVPTYTPSPAPA 460
Query: 380 APPPPAADHAPSEALLAQGRPAAAGCR 406
P PA ++ P+ ++ G PA R
Sbjct: 461 YTPSPAPNYNPAPSVAYSGGPAEPASR 487
Score = 37.7 bits (86), Expect = 0.020
Identities = 59/239 (24%), Positives = 84/239 (35%), Gaps = 29/239 (12%)
Query: 135 SDSPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWN-----SS 189
S P ++ +AA HTA+ +A AS +P + +++ SS
Sbjct: 320 SAQPPAAASPSAASPPLATAAAHTAIASASTTAPAS---SPADSPRPQASSYSPAVAASS 376
Query: 190 LLDLETLSLQSRAARLLKRSKASISS--SSSLSPSDASTSSFPTSSDGLSPFSETFIPDS 247
T + AA K + +S S P AST S P+ SP T P
Sbjct: 377 APATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASTYS-PSPGANYSPTPYTPSPAP 435
Query: 248 SKGLGPRAPASPAPAQAQTPTPAPAPASSQAP-LRPEDDILYQWRQRRKLEQAQGSKGDR 306
+ P +P+P TP+PAPA S AP P + Y G +
Sbjct: 436 AYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPAPSVAY-----------SGGPAEP 484
Query: 307 AWVPPLTPALRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVK 365
A PP +S K P + + I K + P G P P P TV+
Sbjct: 485 ASRPPW-----VTDDSFSQKFAPGKSTTSISK-QTLPRGGPAYTPAGPQVPPLARGTVQ 537
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 48.5 bits (114), Expect = 1e-05
Identities = 71/293 (24%), Positives = 105/293 (35%), Gaps = 51/293 (17%)
Query: 119 ERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQE 178
ERQP P S +P SAAA P + P++ A+ ++ P
Sbjct: 425 ERQPKSPGSTPTTPTSSQAPQKLDASAAAA-------PASLPPSSPAAPIATFSLLPAGG 477
Query: 179 IKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSFPTSSDGLSP 238
+SSL +S A+++ PS +S S ++ G P
Sbjct: 478 APTVFSFGSSSL-----------------KSSATVTGEP---PSYSSGSDSSKAAPGPGP 517
Query: 239 FSETFIPDSSKGLGPRAPASPA---------------PAQAQTPTPA-PAPASSQAPLRP 282
+ +F+P S L P ASP P TP P+ AP + P P
Sbjct: 518 STFSFVPPSKASLAPTPAASPVAPSAASFSFGSSGFKPTLESTPVPSVSAPNIAMKPSFP 577
Query: 283 EDDILYQWRQRRKLEQAQGSK--GDRAWVPPLTP---ALRTLAESLKAKALPPAA--GSV 335
+ K A S PP++P A + A + P +A SV
Sbjct: 578 PSTSAVKVNLSEKFTAAATSTPVSSSQSAPPMSPFSSASKPAASGPLSHPTPLSAPPSSV 637
Query: 336 IRKSEATPSP-GACLQPEVPLSPAEQATTVKASPPAFQVGSPEALAPPPPAAD 387
KS PSP G Q P+ + + +PPA + GSP+A + P A+
Sbjct: 638 PLKSSVLPSPSGRSAQGSSSPVPSMVQKSPRITPPAAKPGSPQAKSLQPAVAE 690
Score = 46.2 bits (108), Expect = 6e-05
Identities = 93/433 (21%), Positives = 149/433 (34%), Gaps = 40/433 (9%)
Query: 14 PFGDAPLGRSHYW------PSQSQTWCPKTLSPSRSQRSRLPQAPKALATGPNSPELFEE 67
PF +P G + PS + T + +PS + S+ P A ++G S +E
Sbjct: 1213 PFSFSPSGTGFNFGIITPTPSSNFT-AAQGATPSTKESSQ----PDAFSSGGGSKPSYEA 1267
Query: 68 SWPSS--SGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFRQAQPTSREE----RQ 121
SS SG S +TT G+ AS + + SG ++ + + P+ E
Sbjct: 1268 IPESSPPSGITSASNTTPGEPAASSSRPVAPSGTALSTT--SSKLETPPSKLGELLFPSS 1325
Query: 122 PAGPTPADFWWLQ----SDSPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQ 177
AG T F L+ DS P++++++ + + VP+ N T+
Sbjct: 1326 LAGETLGSFSGLRVGQADDSTKPTNKASSTSLTSTQPTKTSGVPSGFNFTAPPVL----- 1380
Query: 178 EIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSFPTSSDGLS 237
HT T S+ AA S A S S + SF +S
Sbjct: 1381 ----GKHTEPPVTSSATTTSVAPPAATSTS-STAVFGSLPVTSAGSSGVISFGGTSLSAG 1435
Query: 238 PFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDI-LYQWRQRRKL 296
S +F + P P++P P A TP P P S L R
Sbjct: 1436 KTSFSFGSQQTNSTVP--PSAPPPTTAATPLPTSFPTLSFGSLLSSATTPSLPMSAGRST 1493
Query: 297 EQAQGS----KGDRAWVPPLTPALRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPE 352
E+A S K + V +L +S + PP ++K P
Sbjct: 1494 EEATSSALPEKPGDSEVSASAASLLEEQQSAQLPQAPPQTSDSVKKEPVLAQPAVSNSGT 1553
Query: 353 VPLSPAEQATTVKASPPAFQVGSPEALAPPPPAADHAPSEALLAQGRPAAAGCRRLRRQR 412
S + A + +A+P V A PP ++ P + + ++AG +
Sbjct: 1554 AASSTSLVALSAEATPATTGVPDARTEAVPPASSFSVPGQTAVTAAAISSAGPVAVETSS 1613
Query: 413 VPGRSRAAGAKSP 425
P S +P
Sbjct: 1614 TPIASSTTSIVAP 1626
Score = 35.4 bits (80), Expect = 0.099
Identities = 53/185 (28%), Positives = 70/185 (37%), Gaps = 54/185 (29%)
Query: 252 GPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPP 311
G R P SP TPT P SSQAP +KL+ + + A +PP
Sbjct: 424 GERQPKSPG----STPT---TPTSSQAP--------------QKLDASAAAAP--ASLPP 460
Query: 312 LTPALRTL-----------------AESLKAKAL----PPAAGSVIRKSEATPSPGACLQ 350
+PA + SLK+ A PP+ S S+A P PG
Sbjct: 461 SSPAAPIATFSLLPAGGAPTVFSFGSSSLKSSATVTGEPPSYSSGSDSSKAAPGPGPSTF 520
Query: 351 PEVPLSPAEQATTVKASPPA-----FQVGS----PEALAPPPPAADHAPSEALLAQGRPA 401
VP S A A T ASP A F GS P + P P+ AP+ A+ P+
Sbjct: 521 SFVPPSKASLAPTPAASPVAPSAASFSFGSSGFKPTLESTPVPSVS-APNIAMKPSFPPS 579
Query: 402 AAGCR 406
+ +
Sbjct: 580 TSAVK 584
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 48.5 bits (114), Expect = 1e-05
Identities = 89/384 (23%), Positives = 131/384 (34%), Gaps = 49/384 (12%)
Query: 35 PKTLSPSRSQRS-RLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMWA--SPA 91
PK +P+ ++ + P+ P T +P +E P+++ P+ P+TT+ PA
Sbjct: 244 PKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPA-PTTTKSAPTTPKEPA 302
Query: 92 PTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANK 151
PT K +PT ++PA PT + P P++ A
Sbjct: 303 PTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA-PTTKEPAPTTPKEPAPTAPKKPAPTTP 361
Query: 152 PEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKA 211
E P T A T P K+ T S A K
Sbjct: 362 KEPAPTTPKEPAPTTTKEPSPTTP----KEPAPTTTKS------------APTTTKEPAP 405
Query: 212 SISSSSSLSPSDASTSSFPTSSDGLSPFS-ETFIPDSSKGLGPRAPASPA------PAQA 264
+ + S+ +P + S PT++ +P + + P + K P P PA PA
Sbjct: 406 TTTKSAPTTPKEPS----PTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT 461
Query: 265 QTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLK 324
T PAP AP P++ +KL K A P PA T E
Sbjct: 462 TTKKPAPTTPKEPAPTTPKETAP---TTPKKLTPTTPEK--LAPTTPEKPAPTTPEELAP 516
Query: 325 AKALPPAAGSVIRKSEATPSPGACLQPE--VPLSPAEQA---------TTVKASPPAFQV 373
P + + TP A P+ P +P E A TT K + P
Sbjct: 517 TTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPK 576
Query: 374 G-SPEALAPPPPAADHAPSEALLA 396
G +P L P P P+ LA
Sbjct: 577 GTAPTTLKEPAPTTPKKPAPKELA 600
Score = 48.1 bits (113), Expect = 1e-05
Identities = 82/379 (21%), Positives = 128/379 (33%), Gaps = 39/379 (10%)
Query: 28 SQSQTWCPKTLSPSRSQRSRLPQAPKALA-TGPNSPELFEESWPSSSGTPSLPSTTEGQM 86
++S PK SP+ ++ P PK A T P P P+ + TP P+ T +
Sbjct: 408 TKSAPTTPKEPSPTTTKEPA-PTTPKEPAPTTPKKPAPTTPKEPAPT-TPKEPAPTTTKK 465
Query: 87 WA-----SPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPS 141
A PAPT K + + +PA TP + + P P+
Sbjct: 466 PAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPT 525
Query: 142 SQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSR 201
+ A P+T A P + ++ + + +
Sbjct: 526 TPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAP-------TTPKETAPTTPKGT 578
Query: 202 AARLLKRSKASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAP 261
A LK + + +T+ PTS+ P P + KG P P PAP
Sbjct: 579 APTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKP-----APTTPKGTAPTTPKEPAP 633
Query: 262 AQAQTPTP------APAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPA 315
+ P P AP AP P+ + K +KG + PA
Sbjct: 634 TTPKEPAPTTPKGTAPTTLKEPAPTTPK-------KPAPKELAPTTTKGPTSTTSD-KPA 685
Query: 316 LRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPL-SPAEQATTVKASPPAFQVG 374
T E+ PA + + + TP EV + ++ TT+ SP
Sbjct: 686 PTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSP---DES 742
Query: 375 SPEALA-PPPPAADHAPSE 392
+PE A P P A +++P E
Sbjct: 743 TPELSAEPTPKALENSPKE 761
Score = 42.4 bits (98), Expect = 8e-04
Identities = 44/179 (24%), Positives = 63/179 (35%), Gaps = 21/179 (11%)
Query: 214 SSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPA--- 270
+S++ P+ + S PT+ +P + P + K P PAP + P P
Sbjct: 225 ASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTK 284
Query: 271 -PAPASSQ-APLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKAL 328
PAP +++ AP P+ E A + A P PA T E
Sbjct: 285 EPAPTTTKSAPTTPK-------------EPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPK 331
Query: 329 PPAAGSVIRKSEATPSPGACLQPE--VPLSPAEQATTVKASPPAFQVGSPEALAPPPPA 385
PA + + TP A P+ P +P E A T P P P PA
Sbjct: 332 EPAP-TTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPA 389
Score = 37.4 bits (85), Expect = 0.026
Identities = 52/252 (20%), Positives = 81/252 (32%), Gaps = 20/252 (7%)
Query: 157 HTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSS 216
H V T+ +T+A + P + N T + L + + + S
Sbjct: 109 HNKVSTSPKITTAK-PINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGK 167
Query: 217 SSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLG--------------PRAPASPAPA 262
+ + + S TS+ L+P S+ + K P P PA
Sbjct: 168 EKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPAST 227
Query: 263 QAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAE- 321
+ PTP ++ P P K E A + + A P PA T E
Sbjct: 228 TPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPK-EPAPTTTKEPAPTTPKEPAPTTTKEP 286
Query: 322 -SLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQA-TTVKASPPAFQVGSPEAL 379
K+ P + P+P +P P +P E TT K P + +P
Sbjct: 287 APTTTKSAPTTPKEPAPTTPKKPAPTTPKEP-APTTPKEPTPTTPKEPAPTTKEPAPTTP 345
Query: 380 APPPPAADHAPS 391
P P A P+
Sbjct: 346 KEPAPTAPKKPA 357
Score = 35.0 bits (79), Expect = 0.13
Identities = 40/168 (23%), Positives = 61/168 (36%), Gaps = 14/168 (8%)
Query: 13 SPFGDAPLGRSHYWPSQSQTWCPKTLSPSRSQRSRLPQAPKALATGP--NSPELFEESWP 70
+P G AP P+ + PK L+P+ ++ K T P +P +E P
Sbjct: 574 TPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAP 633
Query: 71 SS--SGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPA 128
++ P+ P T PAPT + K + PTS +PA TP
Sbjct: 634 TTPKEPAPTTPKGTAPTTLKEPAPT---TPKKPAPKELAPTTTKGPTSTTSDKPAPTTP- 689
Query: 129 DFWWLQSDSPDPSSQSAAAGANKP-EGRPHTAVPTAVNVTSASHAVAP 175
+ +P + A KP P T PT V++ + P
Sbjct: 690 -----KETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEP 732
Score = 32.3 bits (72), Expect = 0.84
Identities = 72/311 (23%), Positives = 115/311 (36%), Gaps = 51/311 (16%)
Query: 6 PVFSIQDSPFGDAPLGRSHYWPSQSQTWCPKTLSPS----------RSQRSRLPQ--APK 53
P + D P P G + P + PK +P+ + P+ APK
Sbjct: 607 PTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPK 666
Query: 54 ALA----TGPNS-------PELFEESWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDSVV 102
LA GP S P +E+ P+ TP P+ T + PAPT ++
Sbjct: 667 ELAPTTTKGPTSTTSDKPAPTTPKETAPT---TPKEPAPTTPK---KPAPTTPETPPPTT 720
Query: 103 AKYINRFRQAQPT----SREERQP---AGPTPADFWWLQSDSPDPSSQSAAAGANKPEGR 155
++ +PT S +E P A PTP + P++++ A A KPE
Sbjct: 721 SEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPA--ATKPEMT 778
Query: 156 PHTAVPTA---VNVTSASHAVAP--LQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSK 210
T + T + AP +E S + T + S + K
Sbjct: 779 TTAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFK 838
Query: 211 ASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPA-QAQTPTP 269
+ +++L+P +T T+++ ++ ET P RA S A + Q PT
Sbjct: 839 ITTLKTTTLAPKVTTTKKTITTTEIMNKPEETAKPKD------RATNSKATTPKPQKPTK 892
Query: 270 AP-APASSQAP 279
AP P S++ P
Sbjct: 893 APKKPTSTKKP 903
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 48.5 bits (114), Expect = 1e-05
Identities = 89/384 (23%), Positives = 131/384 (34%), Gaps = 49/384 (12%)
Query: 35 PKTLSPSRSQRS-RLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMWA--SPA 91
PK +P+ ++ + P+ P T +P +E P+++ P+ P+TT+ PA
Sbjct: 285 PKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPA-PTTTKSAPTTPKEPA 343
Query: 92 PTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANK 151
PT K +PT ++PA PT + P P++ A
Sbjct: 344 PTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA-PTTKEPAPTTPKEPAPTAPKKPAPTTP 402
Query: 152 PEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKA 211
E P T A T P K+ T S A K
Sbjct: 403 KEPAPTTPKEPAPTTTKEPSPTTP----KEPAPTTTKS------------APTTTKEPAP 446
Query: 212 SISSSSSLSPSDASTSSFPTSSDGLSPFS-ETFIPDSSKGLGPRAPASPA------PAQA 264
+ + S+ +P + S PT++ +P + + P + K P P PA PA
Sbjct: 447 TTTKSAPTTPKEPS----PTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT 502
Query: 265 QTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLK 324
T PAP AP P++ +KL K A P PA T E
Sbjct: 503 TTKKPAPTTPKEPAPTTPKETAP---TTPKKLTPTTPEK--LAPTTPEKPAPTTPEELAP 557
Query: 325 AKALPPAAGSVIRKSEATPSPGACLQPE--VPLSPAEQA---------TTVKASPPAFQV 373
P + + TP A P+ P +P E A TT K + P
Sbjct: 558 TTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPK 617
Query: 374 G-SPEALAPPPPAADHAPSEALLA 396
G +P L P P P+ LA
Sbjct: 618 GTAPTTLKEPAPTTPKKPAPKELA 641
Score = 48.1 bits (113), Expect = 1e-05
Identities = 82/379 (21%), Positives = 128/379 (33%), Gaps = 39/379 (10%)
Query: 28 SQSQTWCPKTLSPSRSQRSRLPQAPKALA-TGPNSPELFEESWPSSSGTPSLPSTTEGQM 86
++S PK SP+ ++ P PK A T P P P+ + TP P+ T +
Sbjct: 449 TKSAPTTPKEPSPTTTKEPA-PTTPKEPAPTTPKKPAPTTPKEPAPT-TPKEPAPTTTKK 506
Query: 87 WA-----SPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPS 141
A PAPT K + + +PA TP + + P P+
Sbjct: 507 PAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPT 566
Query: 142 SQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSR 201
+ A P+T A P + ++ + + +
Sbjct: 567 TPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAP-------TTPKETAPTTPKGT 619
Query: 202 AARLLKRSKASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAP 261
A LK + + +T+ PTS+ P P + KG P P PAP
Sbjct: 620 APTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKP-----APTTPKGTAPTTPKEPAP 674
Query: 262 AQAQTPTP------APAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPA 315
+ P P AP AP P+ + K +KG + PA
Sbjct: 675 TTPKEPAPTTPKGTAPTTLKEPAPTTPK-------KPAPKELAPTTTKGPTSTTSD-KPA 726
Query: 316 LRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPL-SPAEQATTVKASPPAFQVG 374
T E+ PA + + + TP EV + ++ TT+ SP
Sbjct: 727 PTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSP---DES 783
Query: 375 SPEALA-PPPPAADHAPSE 392
+PE A P P A +++P E
Sbjct: 784 TPELSAEPTPKALENSPKE 802
Score = 42.4 bits (98), Expect = 8e-04
Identities = 44/179 (24%), Positives = 63/179 (35%), Gaps = 21/179 (11%)
Query: 214 SSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPA--- 270
+S++ P+ + S PT+ +P + P + K P PAP + P P
Sbjct: 266 ASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTK 325
Query: 271 -PAPASSQ-APLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKAL 328
PAP +++ AP P+ E A + A P PA T E
Sbjct: 326 EPAPTTTKSAPTTPK-------------EPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPK 372
Query: 329 PPAAGSVIRKSEATPSPGACLQPE--VPLSPAEQATTVKASPPAFQVGSPEALAPPPPA 385
PA + + TP A P+ P +P E A T P P P PA
Sbjct: 373 EPAP-TTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPA 430
Score = 37.4 bits (85), Expect = 0.026
Identities = 52/252 (20%), Positives = 81/252 (32%), Gaps = 20/252 (7%)
Query: 157 HTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSS 216
H V T+ +T+A + P + N T + L + + + S
Sbjct: 150 HNKVSTSPKITTAK-PINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGK 208
Query: 217 SSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLG--------------PRAPASPAPA 262
+ + + S TS+ L+P S+ + K P P PA
Sbjct: 209 EKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPAST 268
Query: 263 QAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAE- 321
+ PTP ++ P P K E A + + A P PA T E
Sbjct: 269 TPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPK-EPAPTTTKEPAPTTPKEPAPTTTKEP 327
Query: 322 -SLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQA-TTVKASPPAFQVGSPEAL 379
K+ P + P+P +P P +P E TT K P + +P
Sbjct: 328 APTTTKSAPTTPKEPAPTTPKKPAPTTPKEP-APTTPKEPTPTTPKEPAPTTKEPAPTTP 386
Query: 380 APPPPAADHAPS 391
P P A P+
Sbjct: 387 KEPAPTAPKKPA 398
Score = 35.0 bits (79), Expect = 0.13
Identities = 40/168 (23%), Positives = 61/168 (36%), Gaps = 14/168 (8%)
Query: 13 SPFGDAPLGRSHYWPSQSQTWCPKTLSPSRSQRSRLPQAPKALATGP--NSPELFEESWP 70
+P G AP P+ + PK L+P+ ++ K T P +P +E P
Sbjct: 615 TPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAP 674
Query: 71 SS--SGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPA 128
++ P+ P T PAPT + K + PTS +PA TP
Sbjct: 675 TTPKEPAPTTPKGTAPTTLKEPAPT---TPKKPAPKELAPTTTKGPTSTTSDKPAPTTP- 730
Query: 129 DFWWLQSDSPDPSSQSAAAGANKP-EGRPHTAVPTAVNVTSASHAVAP 175
+ +P + A KP P T PT V++ + P
Sbjct: 731 -----KETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEP 773
Score = 32.3 bits (72), Expect = 0.84
Identities = 72/311 (23%), Positives = 115/311 (36%), Gaps = 51/311 (16%)
Query: 6 PVFSIQDSPFGDAPLGRSHYWPSQSQTWCPKTLSPS----------RSQRSRLPQ--APK 53
P + D P P G + P + PK +P+ + P+ APK
Sbjct: 648 PTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPK 707
Query: 54 ALA----TGPNS-------PELFEESWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDSVV 102
LA GP S P +E+ P+ TP P+ T + PAPT ++
Sbjct: 708 ELAPTTTKGPTSTTSDKPAPTTPKETAPT---TPKEPAPTTPK---KPAPTTPETPPPTT 761
Query: 103 AKYINRFRQAQPT----SREERQP---AGPTPADFWWLQSDSPDPSSQSAAAGANKPEGR 155
++ +PT S +E P A PTP + P++++ A A KPE
Sbjct: 762 SEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPA--ATKPEMT 819
Query: 156 PHTAVPTA---VNVTSASHAVAP--LQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSK 210
T + T + AP +E S + T + S + K
Sbjct: 820 TTAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFK 879
Query: 211 ASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPA-QAQTPTP 269
+ +++L+P +T T+++ ++ ET P RA S A + Q PT
Sbjct: 880 ITTLKTTTLAPKVTTTKKTITTTEIMNKPEETAKPKD------RATNSKATTPKPQKPTK 933
Query: 270 AP-APASSQAP 279
AP P S++ P
Sbjct: 934 APKKPTSTKKP 944
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 48.5 bits (114), Expect = 1e-05
Identities = 89/384 (23%), Positives = 131/384 (34%), Gaps = 49/384 (12%)
Query: 35 PKTLSPSRSQRS-RLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMWA--SPA 91
PK +P+ ++ + P+ P T +P +E P+++ P+ P+TT+ PA
Sbjct: 337 PKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPA-PTTTKSAPTTPKEPA 395
Query: 92 PTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANK 151
PT K +PT ++PA PT + P P++ A
Sbjct: 396 PTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA-PTTKEPAPTTPKEPAPTAPKKPAPTTP 454
Query: 152 PEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKA 211
E P T A T P K+ T S A K
Sbjct: 455 KEPAPTTPKEPAPTTTKEPSPTTP----KEPAPTTTKS------------APTTTKEPAP 498
Query: 212 SISSSSSLSPSDASTSSFPTSSDGLSPFS-ETFIPDSSKGLGPRAPASPA------PAQA 264
+ + S+ +P + S PT++ +P + + P + K P P PA PA
Sbjct: 499 TTTKSAPTTPKEPS----PTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT 554
Query: 265 QTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLK 324
T PAP AP P++ +KL K A P PA T E
Sbjct: 555 TTKKPAPTTPKEPAPTTPKETAP---TTPKKLTPTTPEK--LAPTTPEKPAPTTPEELAP 609
Query: 325 AKALPPAAGSVIRKSEATPSPGACLQPE--VPLSPAEQA---------TTVKASPPAFQV 373
P + + TP A P+ P +P E A TT K + P
Sbjct: 610 TTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPK 669
Query: 374 G-SPEALAPPPPAADHAPSEALLA 396
G +P L P P P+ LA
Sbjct: 670 GTAPTTLKEPAPTTPKKPAPKELA 693
Score = 48.1 bits (113), Expect = 1e-05
Identities = 82/379 (21%), Positives = 128/379 (33%), Gaps = 39/379 (10%)
Query: 28 SQSQTWCPKTLSPSRSQRSRLPQAPKALA-TGPNSPELFEESWPSSSGTPSLPSTTEGQM 86
++S PK SP+ ++ P PK A T P P P+ + TP P+ T +
Sbjct: 501 TKSAPTTPKEPSPTTTKEPA-PTTPKEPAPTTPKKPAPTTPKEPAPT-TPKEPAPTTTKK 558
Query: 87 WA-----SPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPS 141
A PAPT K + + +PA TP + + P P+
Sbjct: 559 PAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPT 618
Query: 142 SQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSR 201
+ A P+T A P + ++ + + +
Sbjct: 619 TPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAP-------TTPKETAPTTPKGT 671
Query: 202 AARLLKRSKASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAP 261
A LK + + +T+ PTS+ P P + KG P P PAP
Sbjct: 672 APTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKP-----APTTPKGTAPTTPKEPAP 726
Query: 262 AQAQTPTP------APAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPA 315
+ P P AP AP P+ + K +KG + PA
Sbjct: 727 TTPKEPAPTTPKGTAPTTLKEPAPTTPK-------KPAPKELAPTTTKGPTSTTSD-KPA 778
Query: 316 LRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPL-SPAEQATTVKASPPAFQVG 374
T E+ PA + + + TP EV + ++ TT+ SP
Sbjct: 779 PTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSP---DES 835
Query: 375 SPEALA-PPPPAADHAPSE 392
+PE A P P A +++P E
Sbjct: 836 TPELSAEPTPKALENSPKE 854
Score = 42.4 bits (98), Expect = 8e-04
Identities = 44/179 (24%), Positives = 63/179 (35%), Gaps = 21/179 (11%)
Query: 214 SSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPA--- 270
+S++ P+ + S PT+ +P + P + K P PAP + P P
Sbjct: 318 ASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTK 377
Query: 271 -PAPASSQ-APLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKAL 328
PAP +++ AP P+ E A + A P PA T E
Sbjct: 378 EPAPTTTKSAPTTPK-------------EPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPK 424
Query: 329 PPAAGSVIRKSEATPSPGACLQPE--VPLSPAEQATTVKASPPAFQVGSPEALAPPPPA 385
PA + + TP A P+ P +P E A T P P P PA
Sbjct: 425 EPAP-TTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPA 482
Score = 37.4 bits (85), Expect = 0.026
Identities = 52/252 (20%), Positives = 81/252 (32%), Gaps = 20/252 (7%)
Query: 157 HTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSS 216
H V T+ +T+A + P + N T + L + + + S
Sbjct: 202 HNKVSTSPKITTAK-PINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGK 260
Query: 217 SSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLG--------------PRAPASPAPA 262
+ + + S TS+ L+P S+ + K P P PA
Sbjct: 261 EKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPAST 320
Query: 263 QAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAE- 321
+ PTP ++ P P K E A + + A P PA T E
Sbjct: 321 TPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPK-EPAPTTTKEPAPTTPKEPAPTTTKEP 379
Query: 322 -SLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQA-TTVKASPPAFQVGSPEAL 379
K+ P + P+P +P P +P E TT K P + +P
Sbjct: 380 APTTTKSAPTTPKEPAPTTPKKPAPTTPKEP-APTTPKEPTPTTPKEPAPTTKEPAPTTP 438
Query: 380 APPPPAADHAPS 391
P P A P+
Sbjct: 439 KEPAPTAPKKPA 450
Score = 35.0 bits (79), Expect = 0.13
Identities = 40/168 (23%), Positives = 61/168 (36%), Gaps = 14/168 (8%)
Query: 13 SPFGDAPLGRSHYWPSQSQTWCPKTLSPSRSQRSRLPQAPKALATGP--NSPELFEESWP 70
+P G AP P+ + PK L+P+ ++ K T P +P +E P
Sbjct: 667 TPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAP 726
Query: 71 SS--SGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPA 128
++ P+ P T PAPT + K + PTS +PA TP
Sbjct: 727 TTPKEPAPTTPKGTAPTTLKEPAPT---TPKKPAPKELAPTTTKGPTSTTSDKPAPTTP- 782
Query: 129 DFWWLQSDSPDPSSQSAAAGANKP-EGRPHTAVPTAVNVTSASHAVAP 175
+ +P + A KP P T PT V++ + P
Sbjct: 783 -----KETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEP 825
Score = 32.3 bits (72), Expect = 0.84
Identities = 72/311 (23%), Positives = 115/311 (36%), Gaps = 51/311 (16%)
Query: 6 PVFSIQDSPFGDAPLGRSHYWPSQSQTWCPKTLSPS----------RSQRSRLPQ--APK 53
P + D P P G + P + PK +P+ + P+ APK
Sbjct: 700 PTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPK 759
Query: 54 ALA----TGPNS-------PELFEESWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDSVV 102
LA GP S P +E+ P+ TP P+ T + PAPT ++
Sbjct: 760 ELAPTTTKGPTSTTSDKPAPTTPKETAPT---TPKEPAPTTPK---KPAPTTPETPPPTT 813
Query: 103 AKYINRFRQAQPT----SREERQP---AGPTPADFWWLQSDSPDPSSQSAAAGANKPEGR 155
++ +PT S +E P A PTP + P++++ A A KPE
Sbjct: 814 SEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPA--ATKPEMT 871
Query: 156 PHTAVPTA---VNVTSASHAVAP--LQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSK 210
T + T + AP +E S + T + S + K
Sbjct: 872 TTAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFK 931
Query: 211 ASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPA-QAQTPTP 269
+ +++L+P +T T+++ ++ ET P RA S A + Q PT
Sbjct: 932 ITTLKTTTLAPKVTTTKKTITTTEIMNKPEETAKPKD------RATNSKATTPKPQKPTK 985
Query: 270 AP-APASSQAP 279
AP P S++ P
Sbjct: 986 APKKPTSTKKP 996
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 48.5 bits (114), Expect = 1e-05
Identities = 89/384 (23%), Positives = 131/384 (34%), Gaps = 49/384 (12%)
Query: 35 PKTLSPSRSQRS-RLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMWA--SPA 91
PK +P+ ++ + P+ P T +P +E P+++ P+ P+TT+ PA
Sbjct: 378 PKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPA-PTTTKSAPTTPKEPA 436
Query: 92 PTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANK 151
PT K +PT ++PA PT + P P++ A
Sbjct: 437 PTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA-PTTKEPAPTTPKEPAPTAPKKPAPTTP 495
Query: 152 PEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKA 211
E P T A T P K+ T S A K
Sbjct: 496 KEPAPTTPKEPAPTTTKEPSPTTP----KEPAPTTTKS------------APTTTKEPAP 539
Query: 212 SISSSSSLSPSDASTSSFPTSSDGLSPFS-ETFIPDSSKGLGPRAPASPA------PAQA 264
+ + S+ +P + S PT++ +P + + P + K P P PA PA
Sbjct: 540 TTTKSAPTTPKEPS----PTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT 595
Query: 265 QTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLK 324
T PAP AP P++ +KL K A P PA T E
Sbjct: 596 TTKKPAPTTPKEPAPTTPKETAP---TTPKKLTPTTPEK--LAPTTPEKPAPTTPEELAP 650
Query: 325 AKALPPAAGSVIRKSEATPSPGACLQPE--VPLSPAEQA---------TTVKASPPAFQV 373
P + + TP A P+ P +P E A TT K + P
Sbjct: 651 TTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPK 710
Query: 374 G-SPEALAPPPPAADHAPSEALLA 396
G +P L P P P+ LA
Sbjct: 711 GTAPTTLKEPAPTTPKKPAPKELA 734
Score = 48.1 bits (113), Expect = 1e-05
Identities = 82/379 (21%), Positives = 128/379 (33%), Gaps = 39/379 (10%)
Query: 28 SQSQTWCPKTLSPSRSQRSRLPQAPKALA-TGPNSPELFEESWPSSSGTPSLPSTTEGQM 86
++S PK SP+ ++ P PK A T P P P+ + TP P+ T +
Sbjct: 542 TKSAPTTPKEPSPTTTKEPA-PTTPKEPAPTTPKKPAPTTPKEPAPT-TPKEPAPTTTKK 599
Query: 87 WA-----SPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSPDPS 141
A PAPT K + + +PA TP + + P P+
Sbjct: 600 PAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPT 659
Query: 142 SQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSR 201
+ A P+T A P + ++ + + +
Sbjct: 660 TPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAP-------TTPKETAPTTPKGT 712
Query: 202 AARLLKRSKASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAP 261
A LK + + +T+ PTS+ P P + KG P P PAP
Sbjct: 713 APTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKP-----APTTPKGTAPTTPKEPAP 767
Query: 262 AQAQTPTP------APAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPA 315
+ P P AP AP P+ + K +KG + PA
Sbjct: 768 TTPKEPAPTTPKGTAPTTLKEPAPTTPK-------KPAPKELAPTTTKGPTSTTSD-KPA 819
Query: 316 LRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPL-SPAEQATTVKASPPAFQVG 374
T E+ PA + + + TP EV + ++ TT+ SP
Sbjct: 820 PTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSP---DES 876
Query: 375 SPEALA-PPPPAADHAPSE 392
+PE A P P A +++P E
Sbjct: 877 TPELSAEPTPKALENSPKE 895
Score = 42.4 bits (98), Expect = 8e-04
Identities = 44/179 (24%), Positives = 63/179 (35%), Gaps = 21/179 (11%)
Query: 214 SSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPA--- 270
+S++ P+ + S PT+ +P + P + K P PAP + P P
Sbjct: 359 ASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTK 418
Query: 271 -PAPASSQ-APLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKAL 328
PAP +++ AP P+ E A + A P PA T E
Sbjct: 419 EPAPTTTKSAPTTPK-------------EPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPK 465
Query: 329 PPAAGSVIRKSEATPSPGACLQPE--VPLSPAEQATTVKASPPAFQVGSPEALAPPPPA 385
PA + + TP A P+ P +P E A T P P P PA
Sbjct: 466 EPAP-TTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPA 523
Score = 37.4 bits (85), Expect = 0.026
Identities = 52/252 (20%), Positives = 81/252 (32%), Gaps = 20/252 (7%)
Query: 157 HTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSS 216
H V T+ +T+A + P + N T + L + + + S
Sbjct: 243 HNKVSTSPKITTAK-PINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGK 301
Query: 217 SSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLG--------------PRAPASPAPA 262
+ + + S TS+ L+P S+ + K P P PA
Sbjct: 302 EKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPAST 361
Query: 263 QAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAE- 321
+ PTP ++ P P K E A + + A P PA T E
Sbjct: 362 TPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPK-EPAPTTTKEPAPTTPKEPAPTTTKEP 420
Query: 322 -SLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQA-TTVKASPPAFQVGSPEAL 379
K+ P + P+P +P P +P E TT K P + +P
Sbjct: 421 APTTTKSAPTTPKEPAPTTPKKPAPTTPKEP-APTTPKEPTPTTPKEPAPTTKEPAPTTP 479
Query: 380 APPPPAADHAPS 391
P P A P+
Sbjct: 480 KEPAPTAPKKPA 491
Score = 35.0 bits (79), Expect = 0.13
Identities = 40/168 (23%), Positives = 61/168 (36%), Gaps = 14/168 (8%)
Query: 13 SPFGDAPLGRSHYWPSQSQTWCPKTLSPSRSQRSRLPQAPKALATGP--NSPELFEESWP 70
+P G AP P+ + PK L+P+ ++ K T P +P +E P
Sbjct: 708 TPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAP 767
Query: 71 SS--SGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPA 128
++ P+ P T PAPT + K + PTS +PA TP
Sbjct: 768 TTPKEPAPTTPKGTAPTTLKEPAPT---TPKKPAPKELAPTTTKGPTSTTSDKPAPTTP- 823
Query: 129 DFWWLQSDSPDPSSQSAAAGANKP-EGRPHTAVPTAVNVTSASHAVAP 175
+ +P + A KP P T PT V++ + P
Sbjct: 824 -----KETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEP 866
Score = 32.3 bits (72), Expect = 0.84
Identities = 72/311 (23%), Positives = 115/311 (36%), Gaps = 51/311 (16%)
Query: 6 PVFSIQDSPFGDAPLGRSHYWPSQSQTWCPKTLSPS----------RSQRSRLPQ--APK 53
P + D P P G + P + PK +P+ + P+ APK
Sbjct: 741 PTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPK 800
Query: 54 ALA----TGPNS-------PELFEESWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDSVV 102
LA GP S P +E+ P+ TP P+ T + PAPT ++
Sbjct: 801 ELAPTTTKGPTSTTSDKPAPTTPKETAPT---TPKEPAPTTPK---KPAPTTPETPPPTT 854
Query: 103 AKYINRFRQAQPT----SREERQP---AGPTPADFWWLQSDSPDPSSQSAAAGANKPEGR 155
++ +PT S +E P A PTP + P++++ A A KPE
Sbjct: 855 SEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPA--ATKPEMT 912
Query: 156 PHTAVPTA---VNVTSASHAVAP--LQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSK 210
T + T + AP +E S + T + S + K
Sbjct: 913 TTAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFK 972
Query: 211 ASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPA-QAQTPTP 269
+ +++L+P +T T+++ ++ ET P RA S A + Q PT
Sbjct: 973 ITTLKTTTLAPKVTTTKKTITTTEIMNKPEETAKPKD------RATNSKATTPKPQKPTK 1026
Query: 270 AP-APASSQAP 279
AP P S++ P
Sbjct: 1027 APKKPTSTKKP 1037
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 48.1 bits (113), Expect = 1e-05
Identities = 60/232 (25%), Positives = 90/232 (38%), Gaps = 14/232 (6%)
Query: 50 QAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMWASPAP--TLIDSGDSVVAKYIN 107
Q PK+L + + P S P + P T+G + P P T DSG+
Sbjct: 2493 QEPKSLLSLGSYPPAAGSSEPKAPW----PKATDGDLAQEPGPGLTFEDSGNPKSPDKA- 2547
Query: 108 RFRQAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKPEGRPHTAVPTAVNVT 167
QA+ EE + + + + S S SS S + + EG +
Sbjct: 2548 ---QAEQDGAEESESSSSSSSG----SSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGR 2600
Query: 168 SASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTS 227
+ S A + + + +SS + S S ++ S +S SSSSS S S +S+S
Sbjct: 2601 NCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2660
Query: 228 SFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAP 279
S +SS S ++ SS AP + AQA PT A A P
Sbjct: 2661 SSSSSSSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQAGKARP 2712
Score = 41.6 bits (96), Expect = 0.001
Identities = 54/206 (26%), Positives = 70/206 (33%), Gaps = 33/206 (16%)
Query: 199 QSRAARLLKRSKASISSS----SSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPR 254
Q ARLL+R++ + S L P A P T + +
Sbjct: 311 QDEGARLLRRTETLLPGPRPCPSPLPPPPAPPKGPPAPPAATPAGVYTVFREQGREHRVV 370
Query: 255 APASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTP 314
AP +A P P +SQA R R E+ G G PP +P
Sbjct: 371 APTFVPSVEAFDERPGPIQIASQA------------RDARAREREAGRPGVLQ-APPGSP 417
Query: 315 ALRTLAESLKAKAL--------PPAAGSVIRKSEATPSPGA------CLQPEVPLSPAEQ 360
E L+ K PPA +R + A+P P A L+PE P E+
Sbjct: 418 RPLDRPEGLREKNSVIRSLKRPPPADAPTVRATRASPDPRAYVPAKELLKPEADPRPCER 477
Query: 361 ATTVKASPPAFQVGSPEALAP--PPP 384
A A P A Q L P PPP
Sbjct: 478 APRGPAGPAAQQAAKLFGLEPGRPPP 503
Score = 31.6 bits (70), Expect = 1.4
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 6/138 (4%)
Query: 28 SQSQTWCPKTLSPSRSQRSRLPQAPKALATGPNSPELFEESWPSSSGTPSLPSTTEGQMW 87
S S + + S S S S + + ++ +S S SSS T S+
Sbjct: 2625 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDE 2684
Query: 88 ASPAPTLIDSGDSVV-AKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSP-DPSSQSA 145
A+PAPT S + + K + +A+P++ P TPA P P A
Sbjct: 2685 AAPAPTAGPSAQAALPTKATKQAGKARPSA---HSPGKKTPAPQPQAPPPQPTQPLQPKA 2741
Query: 146 AAGA-NKPEGRPHTAVPT 162
AGA ++P+ R +PT
Sbjct: 2742 QAGAKSRPKKREGVHLPT 2759
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 48.1 bits (113), Expect = 1e-05
Identities = 92/366 (25%), Positives = 137/366 (37%), Gaps = 47/366 (12%)
Query: 34 CPKTLSPSRSQRSRLPQAPKALATGPNSPELFEESWPSSSG--TPSLPSTTEGQMWASPA 91
C L P+ + S P AP P L + +S TP P +P+
Sbjct: 1545 CSPVLVPASALASPFPSAPNP---APAQASLLAPASSASQALATPLAPMAAPQTAILAPS 1601
Query: 92 PTLIDSGDSVVAKYINRFRQAQPTSREERQPA---GPTPADFWWLQSDSPDPSSQSAAAG 148
P + V+A A P + P P+ L S SP P+ A
Sbjct: 1602 PAPPLAPLPVLAPSPG----AAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAP 1657
Query: 149 ANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLSLQSRAAR-LLK 207
++ P VP+ + +++ +A + L + S +TLSL + +
Sbjct: 1658 SSTQTMLP-APVPSPLPSPASTQTLALAPALAPTLGGSSPS----QTLSLGTGNPQGPFP 1712
Query: 208 RSKASISSSSSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTP 267
S++ +SSL P+ A T S L P ++T + L P +P PAPA T
Sbjct: 1713 TQTLSLTPASSLVPTPAQTLSLAPGPP-LGP-TQTLSLAPAPPLAPASPVGPAPAHTLTL 1770
Query: 268 TPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTP-ALRTLAESLKAK 326
PA + AS AP + L A VP L P A +TLA + +
Sbjct: 1771 APASSSASLLAPASVQTLTL-----------------SPAPVPTLGPAAAQTLALAPAST 1813
Query: 327 ALPPAAGS--VIRKSEATPSPGACLQPEVPLSPAEQAT-TVKASPP-----AFQVGSPEA 378
P + S V+ S A P P + +P+S E T T+++ PP A G P
Sbjct: 1814 QSPASQASSLVVSASGAAPLP-VTMVSRLPVSKDEPDTLTLRSGPPSPPSTATSFGGPRP 1872
Query: 379 LAPPPP 384
PPP
Sbjct: 1873 RRQPPP 1878
Score = 46.6 bits (109), Expect = 4e-05
Identities = 95/382 (24%), Positives = 135/382 (35%), Gaps = 58/382 (15%)
Query: 27 PSQSQTWCPKTLSPSRSQRSRLP-QAPKALATGPNSPELFEESWP---SSSGTPSLPSTT 82
P+ S P + + S S LP P L ++P S P S+SG L S T
Sbjct: 1418 PNSSPLASPVSSTVSVPLSSSLPISVPTTLPAPASAPLTIPISAPLTVSASGPALLTSVT 1477
Query: 83 EGQMWASPA----PTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSDSP 138
PA P+L SG S A + P+ + P P + S
Sbjct: 1478 PPLAPVVPAAPGPPSLAPSGASPSASALTLGLATAPSLSSSQTPGHP----LLLAPTSSH 1533
Query: 139 DPSSQSAAAGANKPEGRPHTAV----PTAVNVTSASHAV-APLQEIKQNLHTWNSSLLDL 193
P S A A P P +A+ P+A N A ++ AP Q L T + +
Sbjct: 1534 VPGLNSTVAPACSPVLVPASALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAP 1593
Query: 194 ETLSLQSRAARLLKRSKASISSSSSLSPSDASTSS-----FPTSSDGLSPFSETFIPDSS 248
+T L A L ++ S +P AS+ + P+S+ G S S + +P +
Sbjct: 1594 QTAILAPSPAPPLAPLPV-LAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPT 1652
Query: 249 KGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAW 308
L P + + PA P+P P+PAS+Q A
Sbjct: 1653 PVLAPSSTQTMLPAPV--PSPLPSPASTQT---------------------------LAL 1683
Query: 309 VPPLTPALRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASP 368
P L P TL S ++ L G+ P+ L P L P T A
Sbjct: 1684 APALAP---TLGGSSPSQTLSLGTGN---PQGPFPTQTLSLTPASSLVPTPAQTLSLAPG 1737
Query: 369 PAFQVGSPEALAPPPPAADHAP 390
P +LAP PP A +P
Sbjct: 1738 PPLGPTQTLSLAPAPPLAPASP 1759
Score = 38.1 bits (87), Expect = 0.015
Identities = 89/436 (20%), Positives = 150/436 (34%), Gaps = 50/436 (11%)
Query: 5 LPVFSIQDSPFGDAPLGRSHYWPSQSQTWCPKTLSPSRSQRSRLPQ--APKALATGPNSP 62
LP + D P + PL ++ P T SP + Q + AP ++ +SP
Sbjct: 2654 LPPSAASDEPLQE-PLEADRTSEELTEAKTP-TSSPEKPQELVTAEVAAPSTSSSATSSP 2711
Query: 63 ELFEESWPSSSGTPSLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFR---QAQPTSREE 119
E + P T S GQ P G V+ K R + + R
Sbjct: 2712 EGPSPARPPRRRT-SADVEIRGQGTGRPGQP---PGPKVLRKLPGRLVTVVEEKELVRRR 2767
Query: 120 RQPAGPTPADFWWLQSDSPDPSSQSAAA----GANKPEGRPHTAVPTAVNVTSASHAVAP 175
RQ G + S P S S + ++ P G P A P++ T
Sbjct: 2768 RQQRGAASTLVPGVSETSASPGSPSVRSMSGPESSPPIGGPCEAAPSSSLPTPPQQPFIA 2827
Query: 176 LQEIKQNL------HTWNSSLLDLETLSLQSRAARLLKRSKASISSSSSLSPSDASTSSF 229
+ I+ + + +LL + +++ R R K++++ + + + +ST
Sbjct: 2828 RRHIELGVTGGGSPENGDGALLAITPPAVKRRRGRPPKKNRSPADAGRGVDEAPSSTLKG 2887
Query: 230 PTSSDGLSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQ 289
T+ P ET I P P P P Q RP + +L
Sbjct: 2888 KTNGADPVPGPETLIVAD-------------PVLEPQLIPGPQPLGPQPVHRP-NPLLSP 2933
Query: 290 WRQRRKLEQAQGSKGDRAWVPPLTPALRTLAE-SLKAKALPPAAGSVIRKSEATPSPGAC 348
+RR+ + +A P+ + + + + +++ PP S TP P
Sbjct: 2934 VEKRRR------GRPPKARDLPIPGTISSAGDGNSESRTQPPP-----HPSPLTPLPPLL 2982
Query: 349 LQPEVPLSPAEQATTVKASPPAFQVGSPEALAPPPPAADHAPSEALLAQGRPAAAGCRRL 408
+ P ++ T+ SPP + G P PP P P L C
Sbjct: 2983 VCPTATVANTVTTVTISTSPPKRKRGRPPK-NPPSPRPSQLP--VLDRDSTSVLESCGLG 3039
Query: 409 RRQRVPGRSRAAGAKS 424
RR++ G+ + G+ S
Sbjct: 3040 RRRQPQGQGESEGSSS 3055
Score = 34.7 bits (78), Expect = 0.17
Identities = 57/209 (27%), Positives = 67/209 (32%), Gaps = 32/209 (15%)
Query: 217 SSLSPSDASTSSFPTSSDGLSPFSETFIPDSSKGLGPRAPAS-PAPAQAQTPTPAPAP-- 273
SSL +S P SS SP S T S L P + PAPA A P AP
Sbjct: 1405 SSLPGPASSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTTLPAPASAPLTIPISAPLT 1464
Query: 274 --ASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKALP-- 329
AS A L L + G LT L T A SL + P
Sbjct: 1465 VSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLAT-APSLSSSQTPGH 1523
Query: 330 -------------------PAAGSVIRKSEATPSPGACLQPEVP-----LSPAEQATTVK 365
PA V+ + A SP P L+PA A+
Sbjct: 1524 PLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSAPNPAPAQASLLAPASSASQAL 1583
Query: 366 ASPPAFQVGSPEALAPPPPAADHAPSEAL 394
A+P A A+ P PA AP L
Sbjct: 1584 ATPLAPMAAPQTAILAPSPAPPLAPLPVL 1612
Score = 31.6 bits (70), Expect = 1.4
Identities = 60/227 (26%), Positives = 76/227 (33%), Gaps = 50/227 (22%)
Query: 212 SISSSSSLSPSDASTS-SFPTSSDGLSP--FSETFIPDSSKGLGPRAPASPAPAQAQTPT 268
S+ SS+ S + A T S P +++ + P + T + PR +P P A
Sbjct: 1273 SVLPSSTPSTTPAPTGLSLPLAANQVPPTMVNNTGVVKIVVRQAPRDGLTPVPPLA---- 1328
Query: 269 PAPAPASSQAP--LRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAK 326
PAP P SS P L P + L A+ V PL + + + + A
Sbjct: 1329 PAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARAPMPTPTLVRPLLKLVHSPSPEVSAS 1388
Query: 327 ALPPAAGSVIRKSEATPS--PGACLQP-----------------EVPLS----------- 356
A P AA I PS PG P VPLS
Sbjct: 1389 A-PGAAPLTISSPLHVPSSLPGPASSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTTL 1447
Query: 357 ----------PAEQATTVKASPPAFQVGSPEALAPPPPAADHAPSEA 393
P TV AS PA LAP PAA PS A
Sbjct: 1448 PAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLA 1494
Score = 31.2 bits (69), Expect = 1.9
Identities = 38/139 (27%), Positives = 46/139 (33%), Gaps = 39/139 (28%)
Query: 253 PRAPASPAPAQ-------AQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGD 305
PRAP P P + + PTP P P A L S
Sbjct: 1015 PRAPLGPVPVRPPPGPELSAQPTPGPVPQVLPASL-----------------MVSASPAG 1057
Query: 306 RAWVPPLTPALRTLAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVK 365
PPL PA R L LPP + + PSP L P ++K
Sbjct: 1058 ----PPLIPASRPPGPVL----LPPLQPNSGSLPQVLPSPLGVLSG--TSRPPTPTLSLK 1107
Query: 366 ASPPAFQVGSPEALAPPPP 384
+PPA P L+P PP
Sbjct: 1108 PTPPA-----PVRLSPAPP 1121
>gi|215820635 protein phosphatase 1, regulatory subunit 13 like
[Homo sapiens]
Length = 828
Score = 47.8 bits (112), Expect = 2e-05
Identities = 98/412 (23%), Positives = 141/412 (34%), Gaps = 81/412 (19%)
Query: 17 DAPLGRSHYWPSQSQTWCPKTLSPSRSQRSRLPQAPKALATGPNSPELFEESWPSSSGTP 76
D P GRS P TL P P +PK + P +P + P + G
Sbjct: 94 DTPFGRSESAP---------TLHPYS------PLSPKGRPSSPRTPLYLQ---PDAYG-- 133
Query: 77 SLPSTTEGQMWASPAPTLIDSGDSVVAKYINRFRQAQPTSREERQPAGPTPADFWWLQSD 136
SL T SP P D S + R +P RQ PTP DF ++
Sbjct: 134 SLDRAT------SPRPRAFDGAGSS----LGRAPSPRPGPGPLRQQGPPTPFDFLG-RAG 182
Query: 137 SPDPSSQSAAAGANKPEGRPHTAVPTAVNVTSAS-----------HAVAPLQEIKQNL-- 183
SP S + A PE P P AS A AP + +L
Sbjct: 183 SPRGSPLAEGPQAFFPERGPSPRPPATAYDAPASAFGSSLLGSGGSAFAPPLRAQDDLTL 242
Query: 184 -----HTWNSSLLDL------------ETLSLQSRAA----RLLKRSKASISSSSSLSPS 222
WN S LD+ E L + +R A +LL ++S+
Sbjct: 243 RRRPPKAWNESDLDVAYEKKPSQTASYERLDVFARPASPSLQLLPWRESSLDGLGGTGKD 302
Query: 223 DASTSSFPTSSDGLSPFSETFIPDSS---KGLGPRAPASPAPAQAQTPTPAPAPASSQAP 279
+ ++++ P + +SP + D+ + LG P+ P Q + P P SS P
Sbjct: 303 NLTSATLPRNYK-VSPLASDRRSDAGSYRRSLGSAGPSGTLPRSWQPVSRIPMPPSSPQP 361
Query: 280 LRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRTLAESLKAKALPPAAGSVIRKS 339
KL+ A G + P +P L +A PP + +
Sbjct: 362 RGAPRQRPIPLSMIFKLQNAFWEHGASRAMLPGSP--------LFTRAPPP---KLQPQP 410
Query: 340 EATPSPGACLQPEVPLSPAEQATTVKASPP-AFQVGSPEALAPPPPAADHAP 390
+ P P + QP++P P Q T +P Q P PP P + P
Sbjct: 411 QPQPQPQSQPQPQLPPQPQTQPQTPTPAPQHPQQTWPPVNEGPPKPPTELEP 462
Score = 39.3 bits (90), Expect = 0.007
Identities = 58/217 (26%), Positives = 75/217 (34%), Gaps = 64/217 (29%)
Query: 253 PRAPASPAPAQAQTPTPAP------------APASSQAPLRPEDDILYQWRQRRKLEQAQ 300
P+ P P Q QTPTPAP P L PE +I + LE
Sbjct: 422 PQLPPQPQ-TQPQTPTPAPQHPQQTWPPVNEGPPKPPTELEPEPEI--EGLLTPVLEAGD 478
Query: 301 GSKGDRAW-----------------VPPLTPALRTLAE------------SLKAKALPPA 331
+G A VP L R LAE A ALPP
Sbjct: 479 VDEGPVARPLSPTRLQPALPPEAQSVPELEEVARVLAEIPRPLKRRGSMEQAPAVALPPT 538
Query: 332 AGSVIRK-------SEATPSPGACLQPEVPLSPAEQATTVKASPPAFQVGSPEALAPPPP 384
++ P PG PE LSP + + +A PPA +P A PPP
Sbjct: 539 HKKQYQQIISRLFHRHGGPGPGG---PEPELSPITEGSEARAGPPA---PAPPAPIPPPA 592
Query: 385 AADHAPSEALLAQGRPAAAGCRR-LRRQRVPGRSRAA 420
+ +P E +P + R LR+ P ++R A
Sbjct: 593 PSQSSPPE------QPQSMEMRSVLRKAGSPRKARRA 623
Score = 32.7 bits (73), Expect = 0.64
Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 18/79 (22%)
Query: 236 LSPFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRK 295
LSP +E S GP APA PAP P PAP+ S P +P Q + R
Sbjct: 566 LSPITE----GSEARAGPPAPAPPAPI------PPPAPSQSSPPEQP------QSMEMRS 609
Query: 296 LEQAQGS--KGDRAWVPPL 312
+ + GS K RA + PL
Sbjct: 610 VLRKAGSPRKARRARLNPL 628
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.123 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,958,186
Number of Sequences: 37866
Number of extensions: 1339145
Number of successful extensions: 16821
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 1208
Number of HSP's that attempted gapping in prelim test: 10138
Number of HSP's gapped (non-prelim): 5584
length of query: 425
length of database: 18,247,518
effective HSP length: 105
effective length of query: 320
effective length of database: 14,271,588
effective search space: 4566908160
effective search space used: 4566908160
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.