Guide to the Human Genome
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Name: CCNE2 Sequence: fasta or formatted (404aa) NCBI GI: 17318565
Description:

cyclin E2

Referenced in:

Cyclins and Related Functions
Platelets and Megakaryocytes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         18           3
 C cysteine            2.5         10           1
 D aspartate           4.5         18           1
 E glutamate           7.4         30           2
 F phenylalanine       4.5         18           2
 G glycine             3.0         12           2
 H histidine           2.5         10           1
 I isoleucine          7.7         31           3
 K lysine              8.2         33           2
 L leucine            10.9         44           2
 M methionine          2.5         10           1
 N asparagine          3.5         14           1
 P proline             5.7         23           2
 Q glutamine           5.7         23           2
 R arginine            4.2         17           2
 S serine              7.2         29           2
 T threonine           5.7         23           2
 V valine              5.4         22           2
 W tryptophan          2.0          8           1
 Y tyrosine            2.7         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin E2 
CCNE1                 0.425   cyclin E1 isoform 1 
CCNE1                 0.425   cyclin E1 isoform 2 
CCNA1                 0.098   cyclin A1 isoform c 
CCNA1                 0.098   cyclin A1 isoform c 
CCNA1                 0.098   cyclin A1 isoform b 
CCNA1                 0.098   cyclin A1 isoform a 
CCNA2                 0.094   cyclin A 
CCNB2                 0.093   cyclin B2 
CCNB1                 0.090   cyclin B1 
CCND1                 0.085   cyclin D1 
CCND2                 0.080   cyclin D2 
CCND3                 0.077   cyclin D3 isoform 2 
CCNB3                 0.065   cyclin B3 isoform 3 
CCNI                  0.061   cyclin I 
CCNO                  0.046   cyclin domain containing 
CNTD2                 0.045   cyclin N-terminal domain containing 2 isoform 2 [Ho...
CCNI2                 0.043   cyclin I family, member 2 
CCNB3                 0.039   cyclin B3 isoform 1 
CCNG2                 0.036   cyclin G2 
CCNF                  0.034   cyclin F 
CCNJ                  0.030   cyclin J isoform 1 
CCND3                 0.029   cyclin D3 isoform 1 
CCNJ                  0.028   cyclin J isoform 2 
CCNG1                 0.028   cyclin G1 
CCNG1                 0.028   cyclin G1 
CCNJ                  0.028   cyclin J isoform 3 
CCNJL                 0.014   cyclin J-like 
CCND3                 0.013   cyclin D3 isoform 3 
TNNT1                 0.010   troponin T1, skeletal, slow isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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