Guide to the Human Genome
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Name: CCNI Sequence: fasta or formatted (377aa) NCBI GI: 5802992
Description:

cyclin I

Referenced in:

Cyclins and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         25           2
 C cysteine            2.9         11           1
 D aspartate           4.5         17           2
 E glutamate           5.6         21           2
 F phenylalanine       4.2         16           2
 G glycine             2.9         11           1
 H histidine           3.7         14           2
 I isoleucine          3.7         14           2
 K lysine              6.1         23           1
 L leucine            13.8         52           2
 M methionine          2.9         11           1
 N asparagine          3.2         12           1
 P proline             6.4         24           2
 Q glutamine           4.8         18           1
 R arginine            4.8         18           1
 S serine              9.5         36           3
 T threonine           4.2         16           1
 V valine              6.9         26           1
 W tryptophan          1.1          4           1
 Y tyrosine            2.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin I 
CCNI2                 0.233   cyclin I family, member 2 
CCNG2                 0.133   cyclin G2 
CCNG1                 0.110   cyclin G1 
CCNG1                 0.110   cyclin G1 
CCNE2                 0.067   cyclin E2 
CCNE1                 0.057   cyclin E1 isoform 1 
CCNE1                 0.057   cyclin E1 isoform 2 
CNTD2                 0.050   cyclin N-terminal domain containing 2 isoform 2 [Ho...
CCND2                 0.048   cyclin D2 
CCND1                 0.046   cyclin D1 
CCNJ                  0.039   cyclin J isoform 3 
CCNJ                  0.039   cyclin J isoform 1 
CCNJ                  0.039   cyclin J isoform 2 
CCNB2                 0.034   cyclin B2 
CCNA2                 0.034   cyclin A 
CCNO                  0.034   cyclin domain containing 
CCNB1                 0.033   cyclin B1 
CCNB3                 0.033   cyclin B3 isoform 3 
CCND3                 0.030   cyclin D3 isoform 2 
CCNA1                 0.029   cyclin A1 isoform c 
CCNA1                 0.029   cyclin A1 isoform c 
CCNA1                 0.029   cyclin A1 isoform b 
CCNA1                 0.029   cyclin A1 isoform a 
CCNB3                 0.020   cyclin B3 isoform 1 
TMPO                  0.018   thymopoietin isoform gamma 
TMPO                  0.018   thymopoietin isoform beta 
TMPO                  0.018   thymopoietin isoform alpha 
CCND3                 0.014   cyclin D3 isoform 1 
CCNK                  0.012   cyclin K isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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