Guide to the Human Genome
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Name: CCNG1 Sequence: fasta or formatted (295aa) NCBI GI: 4757934
Description:

cyclin G1

Referenced in:

Cyclins and Related Functions

Other entries for this name:
alt mRNA [295aa] cyclin G1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         15           1
 C cysteine            3.7         11           1
 D aspartate           3.1          9           1
 E glutamate           7.5         22           3
 F phenylalanine       4.4         13           2
 G glycine             2.7          8           1
 H histidine           2.4          7           1
 I isoleucine          5.8         17           2
 K lysine              7.8         23           1
 L leucine            14.6         43           2
 M methionine          2.0          6           1
 N asparagine          3.4         10           1
 P proline             3.1          9           1
 Q glutamine           5.8         17           1
 R arginine            6.1         18           2
 S serine              7.5         22           2
 T threonine           5.8         17           3
 V valine              6.1         18           1
 W tryptophan          1.0          3           1
 Y tyrosine            2.4          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin G1 
CCNG1                 1.000   cyclin G1 
CCNG2                 0.480   cyclin G2 
CCNI                  0.144   cyclin I 
CCNI2                 0.105   cyclin I family, member 2 
CCND1                 0.071   cyclin D1 
CCNA2                 0.067   cyclin A 
CCNA1                 0.053   cyclin A1 isoform c 
CCNA1                 0.053   cyclin A1 isoform c 
CCNA1                 0.053   cyclin A1 isoform b 
CCNA1                 0.053   cyclin A1 isoform a 
CCND2                 0.052   cyclin D2 
CCND3                 0.048   cyclin D3 isoform 2 
CCNB3                 0.048   cyclin B3 isoform 3 
CCNB3                 0.044   cyclin B3 isoform 1 
CNTD2                 0.043   cyclin N-terminal domain containing 2 isoform 2 [Ho...
CCNJ                  0.043   cyclin J isoform 3 
CCNJ                  0.043   cyclin J isoform 1 
CCNJ                  0.043   cyclin J isoform 2 
CCNB2                 0.041   cyclin B2 
CCNO                  0.041   cyclin domain containing 
CCNE2                 0.039   cyclin E2 
CCND3                 0.034   cyclin D3 isoform 1 
CCNB1                 0.027   cyclin B1 
CCNE1                 0.025   cyclin E1 isoform 1 
CCNE1                 0.025   cyclin E1 isoform 2 
CCNF                  0.016   cyclin F 
AKAP9                 0.014   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.014   A-kinase anchor protein 9 isoform 3 
USP48                 0.009   ubiquitin specific protease 48 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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