Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 14149999
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14149999 zinc finger, MYND-type containing 15 isoform 2
[Homo sapiens]
(703 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14149999 zinc finger, MYND-type containing 15 isoform 2 [Homo... 1461 0.0
gi|209862893 zinc finger, MYND-type containing 15 isoform 1 [Hom... 1440 0.0
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 48 4e-05
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 48 4e-05
gi|21735415 centromere protein B [Homo sapiens] 47 6e-05
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 46 1e-04
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 46 1e-04
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 46 1e-04
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 46 1e-04
gi|10864057 protamine 3 [Homo sapiens] 46 1e-04
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 45 2e-04
gi|42476169 Paf1, RNA polymerase II associated factor, homolog [... 45 2e-04
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 45 2e-04
gi|215422388 death-domain associated protein isoform a [Homo sap... 45 2e-04
gi|215422366 death-domain associated protein isoform b [Homo sap... 45 2e-04
gi|218505694 potassium channel tetramerisation domain containing... 45 3e-04
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 44 4e-04
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 44 4e-04
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 44 4e-04
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 44 4e-04
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof... 44 4e-04
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof... 44 4e-04
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof... 44 4e-04
gi|13540523 nucleosomal binding protein 1 [Homo sapiens] 44 5e-04
gi|21735569 claspin [Homo sapiens] 44 5e-04
gi|148727368 bromodomain and PHD finger containing, 3 [Homo sapi... 44 5e-04
gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 44 7e-04
gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens] 43 9e-04
gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isof... 43 9e-04
gi|4758392 forkhead box D1 [Homo sapiens] 43 9e-04
>gi|14149999 zinc finger, MYND-type containing 15 isoform 2 [Homo
sapiens]
Length = 703
Score = 1461 bits (3783), Expect = 0.0
Identities = 703/703 (100%), Positives = 703/703 (100%)
Query: 1 MEFVSGYRDEFLDFTALLFGWFRKFVAERGAVGTSLEGRCRQLEAQIRRLPQDPALWVLH 60
MEFVSGYRDEFLDFTALLFGWFRKFVAERGAVGTSLEGRCRQLEAQIRRLPQDPALWVLH
Sbjct: 1 MEFVSGYRDEFLDFTALLFGWFRKFVAERGAVGTSLEGRCRQLEAQIRRLPQDPALWVLH 60
Query: 61 VLPNHSVGISLGQGAEPGPGPGLGTAWLLGDNPPLHLRDLSPYISFVSLEDGEEGEEEEE 120
VLPNHSVGISLGQGAEPGPGPGLGTAWLLGDNPPLHLRDLSPYISFVSLEDGEEGEEEEE
Sbjct: 61 VLPNHSVGISLGQGAEPGPGPGLGTAWLLGDNPPLHLRDLSPYISFVSLEDGEEGEEEEE 120
Query: 121 EDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAREAGGGKDGCRE 180
EDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAREAGGGKDGCRE
Sbjct: 121 EDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAREAGGGKDGCRE 180
Query: 181 DRVENETRPQKRKGQRSEAAPLHVSCLLLVTDEHGTILGIDLLVDGAQGTASWGSGTKDL 240
DRVENETRPQKRKGQRSEAAPLHVSCLLLVTDEHGTILGIDLLVDGAQGTASWGSGTKDL
Sbjct: 181 DRVENETRPQKRKGQRSEAAPLHVSCLLLVTDEHGTILGIDLLVDGAQGTASWGSGTKDL 240
Query: 241 APWAYALLCHSMACPMGSGDPRKPRQLTVGDARLHRELESLVPRLGVKLAKTPMRTWGPR 300
APWAYALLCHSMACPMGSGDPRKPRQLTVGDARLHRELESLVPRLGVKLAKTPMRTWGPR
Sbjct: 241 APWAYALLCHSMACPMGSGDPRKPRQLTVGDARLHRELESLVPRLGVKLAKTPMRTWGPR 300
Query: 301 PGFTFASLRARTCHVCHRHSFEAKLTPCPQCSAVLYCGEACLRADWQRCPDDVSHRFWCP 360
PGFTFASLRARTCHVCHRHSFEAKLTPCPQCSAVLYCGEACLRADWQRCPDDVSHRFWCP
Sbjct: 301 PGFTFASLRARTCHVCHRHSFEAKLTPCPQCSAVLYCGEACLRADWQRCPDDVSHRFWCP 360
Query: 361 RLAAFMERAGELATLPFTYTAEVTSETFNKEAFLASRGLTRGYWTQLSMLIPGPGFSRHP 420
RLAAFMERAGELATLPFTYTAEVTSETFNKEAFLASRGLTRGYWTQLSMLIPGPGFSRHP
Sbjct: 361 RLAAFMERAGELATLPFTYTAEVTSETFNKEAFLASRGLTRGYWTQLSMLIPGPGFSRHP 420
Query: 421 RGNTPSLSLLRGGDPYQLLQGDGTALMPPVPPHPPRGVFVPELNIQNKQSLKIHVVEAGK 480
RGNTPSLSLLRGGDPYQLLQGDGTALMPPVPPHPPRGVFVPELNIQNKQSLKIHVVEAGK
Sbjct: 421 RGNTPSLSLLRGGDPYQLLQGDGTALMPPVPPHPPRGVFVPELNIQNKQSLKIHVVEAGK 480
Query: 481 EFDLVMVFWELLVLLPHVALELQFVGDGLPPESDEQHFTLQRDSLEVSVRPGSGISARPS 540
EFDLVMVFWELLVLLPHVALELQFVGDGLPPESDEQHFTLQRDSLEVSVRPGSGISARPS
Sbjct: 481 EFDLVMVFWELLVLLPHVALELQFVGDGLPPESDEQHFTLQRDSLEVSVRPGSGISARPS 540
Query: 541 SGTKEKGGRRDLQIKVSARPYHLFQGPKPDLVIGFNSGFALKDTWLRSLPRLQSLRVPAF 600
SGTKEKGGRRDLQIKVSARPYHLFQGPKPDLVIGFNSGFALKDTWLRSLPRLQSLRVPAF
Sbjct: 541 SGTKEKGGRRDLQIKVSARPYHLFQGPKPDLVIGFNSGFALKDTWLRSLPRLQSLRVPAF 600
Query: 601 FTESSEYSCVMDGQTMAVATGGGTSPPQPNPFRSPFRLRAADNCMSWYCNAFIFHLVYKP 660
FTESSEYSCVMDGQTMAVATGGGTSPPQPNPFRSPFRLRAADNCMSWYCNAFIFHLVYKP
Sbjct: 601 FTESSEYSCVMDGQTMAVATGGGTSPPQPNPFRSPFRLRAADNCMSWYCNAFIFHLVYKP 660
Query: 661 AQGSGARPAPGPPPPSPTPSAPPAPTRRRRGEKKPGRGARRRK 703
AQGSGARPAPGPPPPSPTPSAPPAPTRRRRGEKKPGRGARRRK
Sbjct: 661 AQGSGARPAPGPPPPSPTPSAPPAPTRRRRGEKKPGRGARRRK 703
>gi|209862893 zinc finger, MYND-type containing 15 isoform 1 [Homo
sapiens]
Length = 742
Score = 1440 bits (3728), Expect = 0.0
Identities = 702/742 (94%), Positives = 702/742 (94%), Gaps = 39/742 (5%)
Query: 1 MEFVSGYRDEFLDFTALLFGWFRKFVAERGAVGTSLEGRCRQLEAQIRRLPQDPALWVLH 60
MEFVSGYRDEFLDFTALLFGWFRKFVAERGAVGTSLEGRCRQLEAQIRRLPQDPALWVLH
Sbjct: 1 MEFVSGYRDEFLDFTALLFGWFRKFVAERGAVGTSLEGRCRQLEAQIRRLPQDPALWVLH 60
Query: 61 VLPNHSVGISLGQGAEPGPGPGLGTAWLLGDNPPLHLRDLSPYISFVSLEDGEEGEEEEE 120
VLPNHSVGISLGQGAEPGPGPGLGTAWLLGDNPPLHLRDLSPYISFVSLEDGEEGEEEEE
Sbjct: 61 VLPNHSVGISLGQGAEPGPGPGLGTAWLLGDNPPLHLRDLSPYISFVSLEDGEEGEEEEE 120
Query: 121 EDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAREAGGGKDGCRE 180
EDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAREAGGGKDGCRE
Sbjct: 121 EDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAREAGGGKDGCRE 180
Query: 181 DRVENETRPQKRKGQRSEAAPLHVSCLLLVTDEHGTILGIDLLVDGAQGTASWGSGTKDL 240
DRVENETRPQKRKGQRSEAAPLHVSCLLLVTDEHGTILGIDLLVDGAQGTASWGSGTKDL
Sbjct: 181 DRVENETRPQKRKGQRSEAAPLHVSCLLLVTDEHGTILGIDLLVDGAQGTASWGSGTKDL 240
Query: 241 APWAYALLCHSMACPMGSGDPRKPRQLTVGDARLHRELESLVPRLGVKLAKTPMRTWGPR 300
APWAYALLCHSMACPMGSGDPRKPRQLTVGDARLHRELESLVPRLGVKLAKTPMRTWGPR
Sbjct: 241 APWAYALLCHSMACPMGSGDPRKPRQLTVGDARLHRELESLVPRLGVKLAKTPMRTWGPR 300
Query: 301 PGFTFASLRARTCHVCHRHSFEAKLTPCPQCSAVLYCGEACLRADWQRCPDDVSHRFWCP 360
PGFTFASLRARTCHVCHRHSFEAKLTPCPQCSAVLYCGEACLRADWQRCPDDVSHRFWCP
Sbjct: 301 PGFTFASLRARTCHVCHRHSFEAKLTPCPQCSAVLYCGEACLRADWQRCPDDVSHRFWCP 360
Query: 361 RLAAFMERAGELATLPFTYTAEVTSETFNKEAFLASRGLTRGYWTQLSMLIPGPGFSRHP 420
RLAAFMERAGELATLPFTYTAEVTSETFNKEAFLASRGLTRGYWTQLSMLIPGPGFSRHP
Sbjct: 361 RLAAFMERAGELATLPFTYTAEVTSETFNKEAFLASRGLTRGYWTQLSMLIPGPGFSRHP 420
Query: 421 RGNTPSLSLLRGGDPYQLLQGDGTALMPPVPPHPPRGVF--------------------- 459
RGNTPSLSLLRGGDPYQLLQGDGTALMPPVPPHPPRGVF
Sbjct: 421 RGNTPSLSLLRGGDPYQLLQGDGTALMPPVPPHPPRGVFGSWQDYYTWRGLSLDSPIAVL 480
Query: 460 ------------------VPELNIQNKQSLKIHVVEAGKEFDLVMVFWELLVLLPHVALE 501
PELNIQNKQSLKIHVVEAGKEFDLVMVFWELLVLLPHVALE
Sbjct: 481 LTYPLTVYYVITHLVPQSFPELNIQNKQSLKIHVVEAGKEFDLVMVFWELLVLLPHVALE 540
Query: 502 LQFVGDGLPPESDEQHFTLQRDSLEVSVRPGSGISARPSSGTKEKGGRRDLQIKVSARPY 561
LQFVGDGLPPESDEQHFTLQRDSLEVSVRPGSGISARPSSGTKEKGGRRDLQIKVSARPY
Sbjct: 541 LQFVGDGLPPESDEQHFTLQRDSLEVSVRPGSGISARPSSGTKEKGGRRDLQIKVSARPY 600
Query: 562 HLFQGPKPDLVIGFNSGFALKDTWLRSLPRLQSLRVPAFFTESSEYSCVMDGQTMAVATG 621
HLFQGPKPDLVIGFNSGFALKDTWLRSLPRLQSLRVPAFFTESSEYSCVMDGQTMAVATG
Sbjct: 601 HLFQGPKPDLVIGFNSGFALKDTWLRSLPRLQSLRVPAFFTESSEYSCVMDGQTMAVATG 660
Query: 622 GGTSPPQPNPFRSPFRLRAADNCMSWYCNAFIFHLVYKPAQGSGARPAPGPPPPSPTPSA 681
GGTSPPQPNPFRSPFRLRAADNCMSWYCNAFIFHLVYKPAQGSGARPAPGPPPPSPTPSA
Sbjct: 661 GGTSPPQPNPFRSPFRLRAADNCMSWYCNAFIFHLVYKPAQGSGARPAPGPPPPSPTPSA 720
Query: 682 PPAPTRRRRGEKKPGRGARRRK 703
PPAPTRRRRGEKKPGRGARRRK
Sbjct: 721 PPAPTRRRRGEKKPGRGARRRK 742
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 47.8 bits (112), Expect = 4e-05
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAR 169
EDGEE EEEEEE+EEEE+ E+ E+ + EE + S S + ++ + R
Sbjct: 227 EDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSESVSFTDGSVR 286
Query: 170 EAGGGKDGCREDRVENE 186
+G G DG E + E +
Sbjct: 287 -SGSGTDGSDEKKKERK 302
Score = 36.2 bits (82), Expect = 0.11
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 18/105 (17%)
Query: 113 EEGEEEEEEDEEEEKREDGGAGSTE-------------KVEPEEDRELAPTSRESPQETN 159
+ +EE +E E G +GS++ + + EED E+ + E +E +
Sbjct: 168 QSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEED-EEVD 226
Query: 160 PPGESEEAAREAGGGKDGCREDRVENETRPQKRKGQ----RSEAA 200
GE EE E ++ E+ E + R QK +G RSEA+
Sbjct: 227 EDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEAS 271
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 47.8 bits (112), Expect = 4e-05
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAR 169
EDGEE EEEEEE+EEEE+ E+ E+ + EE + S S + ++ + R
Sbjct: 227 EDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSESVSFTDGSVR 286
Query: 170 EAGGGKDGCREDRVENE 186
+G G DG E + E +
Sbjct: 287 -SGSGTDGSDEKKKERK 302
Score = 36.2 bits (82), Expect = 0.11
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 18/105 (17%)
Query: 113 EEGEEEEEEDEEEEKREDGGAGSTE-------------KVEPEEDRELAPTSRESPQETN 159
+ +EE +E E G +GS++ + + EED E+ + E +E +
Sbjct: 168 QSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEED-EEVD 226
Query: 160 PPGESEEAAREAGGGKDGCREDRVENETRPQKRKGQ----RSEAA 200
GE EE E ++ E+ E + R QK +G RSEA+
Sbjct: 227 EDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEAS 271
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 47.0 bits (110), Expect = 6e-05
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGG----AGSTEKVEPEEDRELAPTSRESPQETNPPGESE 165
E+ EEGE EEEE+E EE+ E+GG G E+VE E D + E + ++ E+E
Sbjct: 415 EEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEEEEDEESSSEGLEAE 474
Query: 166 EAAR---EAGG--GKDGCRED 181
+ A+ EAGG G G +E+
Sbjct: 475 DWAQGVVEAGGSFGAYGAQEE 495
Score = 43.1 bits (100), Expect = 9e-04
Identities = 30/74 (40%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 114 EGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAREAGG 173
EGEEEEEE+EEEE+ E G G E+ E EE+ E E GE EE E G
Sbjct: 404 EGEEEEEEEEEEEEEE--GEGEEEEEEGEEEEEEGGEGEEL-------GEEEEVEEE--G 452
Query: 174 GKDGCREDRVENET 187
D E+ + E+
Sbjct: 453 DVDSDEEEEEDEES 466
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
sapiens]
Length = 1341
Score = 46.2 bits (108), Expect = 1e-04
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGAGSTE----KVEPEEDRELAPTSRESPQETNPPGES- 164
E+ EE EEEEEED+EEE+ +D G S E K EE E+ E + P S
Sbjct: 270 EEEEEEEEEEEEDDEEEEGDDEGQKSREAPILKEFKEEGEEIPRVKPEEMMDERPKTRSQ 329
Query: 165 EEAAREAGGGKDGCREDRVENETRPQKRKGQRSEAAPL 202
E+ E GG +E+ ++ Q+++ + +PL
Sbjct: 330 EQEVLERGGRFTRSQEEARKSHLARQQQEKEMKTTSPL 367
Score = 34.3 bits (77), Expect = 0.41
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAR 169
E +E E+ +E EEEE++E E+ E + SRE +E E + R
Sbjct: 1243 ERAKEREKRRKEQEEEEQKEREKEAERERNRQLEREKRREHSRERDRERERERERDRGDR 1302
Query: 170 EAGGGKDGCREDRVENETRPQKRKGQ-RSEAAPL 202
+ +D RE E + R KR + RS + P+
Sbjct: 1303 DRDRERD--RERGRERDRRDTKRHSRSRSRSTPV 1334
Score = 30.4 bits (67), Expect = 5.9
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Query: 109 LEDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGE-SEEA 167
L +G + EEEE+ E + A K E EE+ E + +E + G+ S EA
Sbjct: 239 LSEGSQPAEEEEDQETPSRNLRVRADRNLKTEEEEEEEEEEEEDDEEEEGDDEGQKSREA 298
Query: 168 AREAGGGKDGCREDRVENETRPQKRKGQRSE 198
++G RV+ E +R RS+
Sbjct: 299 PILKEFKEEGEEIPRVKPEEMMDERPKTRSQ 329
Score = 30.0 bits (66), Expect = 7.6
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 17/118 (14%)
Query: 91 DNPPLHLRD-------LSPYISFVSLEDGE----EGEEEEEEDEEEEKREDGGAGSTEKV 139
+ PP L D +P I ++ L D + E E E E E++R++ ++
Sbjct: 1204 EEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKER 1263
Query: 140 EPEEDREL-APTSRESPQETNPPGESEEAAREAGGGKDGCREDRVENETRPQKRKGQR 196
E E +RE RE +E S E RE ++ R DR + R ++R +R
Sbjct: 1264 EKEAERERNRQLEREKRRE-----HSRERDRERERERERDRGDRDRDRERDRERGRER 1316
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 46.2 bits (108), Expect = 1e-04
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 113 EEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAREAG 172
EEGE+EEEE +EEE+ ED GA S + E ++E + E QE E E A G
Sbjct: 523 EEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQE-----EGETEAEAEG 577
Query: 173 GGKDGCREDRVENET 187
+ E +VE ++
Sbjct: 578 EEAEAKEEKKVEEKS 592
Score = 40.4 bits (93), Expect = 0.006
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAR 169
E EE EEE E +EEE + +T EE+ E + +E G + A
Sbjct: 490 EAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAE 549
Query: 170 EAGGGKDGCRE----DRVENETRPQKRKGQRSEA 199
E G K+G E ++ E ET + +G+ +EA
Sbjct: 550 EGGSEKEGSSEKEEGEQEEGETEAE-AEGEEAEA 582
Score = 40.0 bits (92), Expect = 0.007
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAR 169
E+ +E EE+EE+ E E+ E S K E +E E ++ G+ EE
Sbjct: 486 EEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKE------EEGEKEEEEGQEEEEEE 539
Query: 170 EAGGGKDGCREDRVENETRPQKRKGQRSE 198
+ G D E E E +K +G++ E
Sbjct: 540 DEGAKSDQAEEGGSEKEGSSEKEEGEQEE 568
Score = 39.7 bits (91), Expect = 0.010
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 107 VSLEDGEEGEEEEEEDEEEE-------KREDGGA---GSTEKVEPE-EDRELAPTSRESP 155
V E+GE+ EEE +E+EEEE + E+GG+ GS+EK E E E+ E +
Sbjct: 520 VKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEE 579
Query: 156 QETNPPGESEEAAREAGGGKDGCREDRVENETRPQKRK 193
E + EE + E ++ + +VE +P+K K
Sbjct: 580 AEAKEEKKVEEKSEEVATKEELVADAKVE---KPEKAK 614
Score = 32.7 bits (73), Expect = 1.2
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGA---GSTEKVEPEEDRELAPTSRESPQETNPPGESEE 166
E EEG+ ++E E+E+ +GG+ GS + + ++A +E E E+
Sbjct: 760 ETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKE-----EVEQ 814
Query: 167 AAREAGGGKD---GCREDRVENETRPQKRKGQRSEAAPLHVSCLLLVTDEHG 215
+E G G++ G + ++ +K+ G +SE + + +T E G
Sbjct: 815 ETKEKGSGREEEKGVVTNGLDLSPADEKKGGDKSEEKVVVTKTVEKITSEGG 866
Score = 30.8 bits (68), Expect = 4.5
Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 28/109 (25%)
Query: 113 EEGEEEEEEDEEEEKREDGGAGSTEKVE------PEEDRELAPTSRES------------ 154
E G+ E++E+EE+E +E EK E PE+ + +P E+
Sbjct: 695 EVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVTITKSVK 754
Query: 155 ---PQETNPPGE--SEEAAREAGGGKDGCREDRVENETRPQKRKGQRSE 198
+ET G+ +E +E GG+ G E E + KG R E
Sbjct: 755 VHLEKETKEEGKPLQQEKEKEKAGGEGGS-----EEEGSDKGAKGSRKE 798
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 46.2 bits (108), Expect = 1e-04
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 113 EEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAREAG 172
EEGE+EEEE +EEE+ ED GA S + E ++E + E QE E E A G
Sbjct: 147 EEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQE-----EGETEAEAEG 201
Query: 173 GGKDGCREDRVENET 187
+ E +VE ++
Sbjct: 202 EEAEAKEEKKVEEKS 216
Score = 40.4 bits (93), Expect = 0.006
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAR 169
E EE EEE E +EEE + +T EE+ E + +E G + A
Sbjct: 114 EAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAE 173
Query: 170 EAGGGKDGCRE----DRVENETRPQKRKGQRSEA 199
E G K+G E ++ E ET + +G+ +EA
Sbjct: 174 EGGSEKEGSSEKEEGEQEEGETEAE-AEGEEAEA 206
Score = 40.0 bits (92), Expect = 0.007
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAR 169
E+ +E EE+EE+ E E+ E S K E +E E ++ G+ EE
Sbjct: 110 EEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKE------EEGEKEEEEGQEEEEEE 163
Query: 170 EAGGGKDGCREDRVENETRPQKRKGQRSE 198
+ G D E E E +K +G++ E
Sbjct: 164 DEGAKSDQAEEGGSEKEGSSEKEEGEQEE 192
Score = 39.7 bits (91), Expect = 0.010
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 107 VSLEDGEEGEEEEEEDEEEE-------KREDGGA---GSTEKVEPE-EDRELAPTSRESP 155
V E+GE+ EEE +E+EEEE + E+GG+ GS+EK E E E+ E +
Sbjct: 144 VKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEE 203
Query: 156 QETNPPGESEEAAREAGGGKDGCREDRVENETRPQKRK 193
E + EE + E ++ + +VE +P+K K
Sbjct: 204 AEAKEEKKVEEKSEEVATKEELVADAKVE---KPEKAK 238
Score = 32.7 bits (73), Expect = 1.2
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGA---GSTEKVEPEEDRELAPTSRESPQETNPPGESEE 166
E EEG+ ++E E+E+ +GG+ GS + + ++A +E E E+
Sbjct: 384 ETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKE-----EVEQ 438
Query: 167 AAREAGGGKD---GCREDRVENETRPQKRKGQRSEAAPLHVSCLLLVTDEHG 215
+E G G++ G + ++ +K+ G +SE + + +T E G
Sbjct: 439 ETKEKGSGREEEKGVVTNGLDLSPADEKKGGDKSEEKVVVTKTVEKITSEGG 490
Score = 30.8 bits (68), Expect = 4.5
Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 28/109 (25%)
Query: 113 EEGEEEEEEDEEEEKREDGGAGSTEKVE------PEEDRELAPTSRES------------ 154
E G+ E++E+EE+E +E EK E PE+ + +P E+
Sbjct: 319 EVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVTITKSVK 378
Query: 155 ---PQETNPPGE--SEEAAREAGGGKDGCREDRVENETRPQKRKGQRSE 198
+ET G+ +E +E GG+ G E E + KG R E
Sbjct: 379 VHLEKETKEEGKPLQQEKEKEKAGGEGGS-----EEEGSDKGAKGSRKE 422
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 46.2 bits (108), Expect = 1e-04
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 22/148 (14%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGAGSTE------KVEPEEDRELAPTSRESPQETNPPGE 163
E+ EE EEEEEE+EEEE E+ G G+ E K + +E+ E++ T +E + E
Sbjct: 1352 EEEEEEEEEEEEEEEEEGEEEEGGGNVEKDPDGAKSQEKEEPEIS-TEKEDSARLDDHEE 1410
Query: 164 SEEAAREAGGGKDGCREDRVENETRPQKRKGQRSEAAPLHVSCLLLVTDEHGTILGI--- 220
EE E +D +D E+++ + + ++ E L V + T L +
Sbjct: 1411 EEEEDEEPSHNEDHDADD--EDDSHMESAEVEKEE---LPRESFKEVLENQETFLDLNVQ 1465
Query: 221 ------DLLVD-GAQGTASWGSGTKDLA 241
++L+D G TAS S K+LA
Sbjct: 1466 PGHSNPEVLMDCGVDLTASCNSEPKELA 1493
Score = 40.8 bits (94), Expect = 0.004
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 104 ISFVSLEDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNP 160
+S S E+ EE E+EEEE+EEEE+ ED E+ E EE+ E P+ T P
Sbjct: 1064 LSKESSEEEEEEEDEEEEEEEEEEEED----EEEEEEEEEEEEEENIQSSPPRLTKP 1116
Score = 39.7 bits (91), Expect = 0.010
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 108 SLEDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQ 156
S E+ EE +EEEEE+EEEE+ ++ E+ E EE+ + +P PQ
Sbjct: 1069 SEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSPPRLTKPQ 1117
Score = 39.3 bits (90), Expect = 0.013
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 116 EEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPP 161
EEEEEEDEEEE+ E+ E+ E EE+ E + SP P
Sbjct: 1071 EEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSPPRLTKP 1116
Score = 36.2 bits (82), Expect = 0.11
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Query: 109 LEDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETN 159
LE +E EEEEE+E+EE+ E E+ E EED E E +E N
Sbjct: 1062 LELSKESSEEEEEEEDEEEEE-------EEEEEEEDEEEEEEEEEEEEEEN 1105
Score = 32.3 bits (72), Expect = 1.5
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 113 EEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPP 161
E +E EE+EEEE E+ E+ + EE+ E E +++PP
Sbjct: 1063 ELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSPP 1111
Score = 31.2 bits (69), Expect = 3.4
Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 8/104 (7%)
Query: 101 SPYISFVSLEDGEEGEE--EEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQET 158
SP + E E GE +EE+ EE ++ +PE+D E +E
Sbjct: 1301 SPSPIRIEEEVKETGEALLPQEENRREETCAPVSPNTSPGEKPEDDLIKPEEEEEEEEEE 1360
Query: 159 NPPGESEEAAREAGGGK-----DGCR-EDRVENETRPQKRKGQR 196
E EE E GGG DG + +++ E E +K R
Sbjct: 1361 EEEEEEEEGEEEEGGGNVEKDPDGAKSQEKEEPEISTEKEDSAR 1404
>gi|10864057 protamine 3 [Homo sapiens]
Length = 103
Score = 45.8 bits (107), Expect = 1e-04
Identities = 34/96 (35%), Positives = 42/96 (43%), Gaps = 11/96 (11%)
Query: 71 LGQGAEPGPGPGLGTAWLLGDNPPLHLRDLSPYISFVSLED------GEEGEEEEEEDEE 124
L G PG PG T G H + ++ VS ++ GEE EEEEEE EE
Sbjct: 8 LNTGQSPGHSPGHSTGHGRG-----HESSMKKLMACVSQDNFSLSSAGEEEEEEEEEGEE 62
Query: 125 EEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNP 160
EEK E G +EPE E + E+ Q P
Sbjct: 63 EEKEELPVQGKLLLLEPERQEEGQKDNAEAQQSPEP 98
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 45.4 bits (106), Expect = 2e-04
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPE-----------EDRELAPTSRESPQET 158
E+GEEGE E EE+E E + E+ G G E+ E E E+ E E +E
Sbjct: 869 EEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEG 928
Query: 159 NPPGESEEAAREAGGGKDGCREDRVENETRPQKRKGQRSE 198
GE EE E G+ E+ E E ++ +G+ E
Sbjct: 929 EGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEE 968
Score = 45.1 bits (105), Expect = 2e-04
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 16/105 (15%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGG---------AGSTEKVEPEEDRELAPTSRESPQETNP 160
E+ EGEEEE + EEEE++E G G EK E E +E E +E
Sbjct: 733 EEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGD 792
Query: 161 PGESEE-------AAREAGGGKDGCREDRVENETRPQKRKGQRSE 198
GE EE +E GG +G + + E ++ +G+ E
Sbjct: 793 QGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEE 837
Score = 43.9 bits (102), Expect = 5e-04
Identities = 32/92 (34%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 111 DGEEGEEEEEEDEEEEKRE----DGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEE 166
D EGEEEE E EEK E +GG K E EE+ E E + GE EE
Sbjct: 792 DQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEE 851
Query: 167 AAREAGGGKDGCREDRVENETRPQKRKGQRSE 198
E G ++G E E E + +G+ E
Sbjct: 852 EEGEGKGEEEG-EEGEGEEEGEEGEGEGEEEE 882
Score = 42.7 bits (99), Expect = 0.001
Identities = 26/85 (30%), Positives = 38/85 (44%)
Query: 111 DGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAARE 170
+GEE E E EE+E E + E+G E+ E E E +E GE EE
Sbjct: 834 EGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEG 893
Query: 171 AGGGKDGCREDRVENETRPQKRKGQ 195
G ++G E E E ++ +G+
Sbjct: 894 EGEEEEGEGEGEEEGEGEGEEEEGE 918
Score = 42.4 bits (98), Expect = 0.001
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 113 EEGEEEEEEDEEEEKREDGGAGSTE-KVEPEEDRELAPTSRESPQETNPPGESEEAAREA 171
EEGE E EE+E EE+ E+ G G E + E EE+ E +E GE EE E
Sbjct: 984 EEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEG 1043
Query: 172 -GGGKDGCREDRVENETRPQKRKGQRSE 198
K+G E+ N ++ +G+ E
Sbjct: 1044 EEREKEGEGEENRRNREEEEEEEGKYQE 1071
Score = 42.0 bits (97), Expect = 0.002
Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Query: 110 EDGEEGEEEEEEDEEEE----KREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESE 165
E+ EGEEEE E EEEE E+G G E+ E + E E E GE E
Sbjct: 837 EEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGE 896
Query: 166 EAAREAGGGKDGCREDRVENETRPQKRKGQRSE 198
E E G ++G E E + +G+ E
Sbjct: 897 EEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGE 929
Score = 42.0 bits (97), Expect = 0.002
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 113 EEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAREAG 172
EEGE E EE+E E + E+ G G E+ E E + E E +E GE E E G
Sbjct: 951 EEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEE-EEGEEEGEEEGEGEEEG 1009
Query: 173 GGK-DGCREDRVENETRPQKRKGQRSE 198
G+ + E VE E ++ +G+ E
Sbjct: 1010 EGEGEEEEEGEVEGEVEGEEGEGEGEE 1036
Score = 41.2 bits (95), Expect = 0.003
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 111 DGEEGE---EEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEE 166
+GEEGE EEEE +EE E+RE G G + EE+ E +E+ +E N + EE
Sbjct: 1026 EGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEENERQDGEE 1084
Score = 40.8 bits (94), Expect = 0.004
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 110 EDGE-EGEEEEEEDEEEEKREDG-GAGSTEKVEPEEDRELAPTSRESPQETNPPGESE-E 166
E+GE +GEEE EE E EE+ E+G G G E+ E E + E E E E E E
Sbjct: 852 EEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGE 911
Query: 167 AAREAGGGKDGCREDRVENETRPQKRKGQ 195
E G GK E+ E E ++ +G+
Sbjct: 912 GEEEEGEGKG--EEEGEEGEGEGEEEEGE 938
Score = 40.8 bits (94), Expect = 0.004
Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 110 EDGEEGEEEE--EEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEA 167
E+GEEGE EE EE E E + E+G E+ E E + E E E GE EE
Sbjct: 860 EEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEE----EGEGEGEEEGEGEGEEE 915
Query: 168 AREAGGGKDGCREDRVENETRPQKRKGQRSE 198
E G ++G E E E + +G+ E
Sbjct: 916 EGEGKGEEEG-EEGEGEGEEEEGEGEGEDGE 945
Score = 40.8 bits (94), Expect = 0.004
Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 111 DGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAARE 170
+GEE E EEE +EE E E+G E+ E E + E+ E E GE E RE
Sbjct: 989 EGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGE-EEEGEEEGEERE 1047
Query: 171 AGGGKDGCREDRVENETRPQK 191
G + R +R E E K
Sbjct: 1048 KEGEGEENRRNREEEEEEEGK 1068
Score = 39.7 bits (91), Expect = 0.010
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 111 DGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAR- 169
+GEE E E E+ E E E+ G G E+ E EE+ E E +E GE EE
Sbjct: 965 EGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGE---EEGEGEEEGEGEGEEEEEGEV 1021
Query: 170 ------EAGGGKDGCREDRVENETRPQKRKGQRS 197
E G G+ E E E R ++ +G+ +
Sbjct: 1022 EGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEEN 1055
Score = 38.5 bits (88), Expect = 0.021
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 109 LEDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAA 168
+E EGE+E E +EE K+ DG ++ E +E E +E + GE EE
Sbjct: 686 MERPGEGEKELAE-KEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGD 744
Query: 169 RE-----AGGGKDGCREDRVENETRPQKRKGQRSEAA 200
RE G GK+ + VE E ++ + ++ E A
Sbjct: 745 REEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERA 781
Score = 37.4 bits (85), Expect = 0.048
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 109 LEDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAA 168
+E+G+ EEEEE+ E E+ E G G E+ E EE+ +E GE EE
Sbjct: 819 VEEGKGEREEEEEEGEGEEEE--GEGEEEEGEGEEEE-----GEGKGEEEGEEGEGEEEG 871
Query: 169 REA---GGGKDGCREDRVENETRPQKRKGQ 195
E G ++G E E E ++ +G+
Sbjct: 872 EEGEGEGEEEEGEGEGEEEGEGEGEEEEGE 901
Score = 37.0 bits (84), Expect = 0.063
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 16/104 (15%)
Query: 111 DGEEGEEEEEEDEEEEKR---------EDGGAGSTEKVEPEEDRELAPTSRESPQETNPP 161
DGEE E++E E +++R E+ G G E+ + EE+ E +E +
Sbjct: 706 DGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVE 765
Query: 162 GESE----EAAREAGGGKDGCRE---DRVENETRPQKRKGQRSE 198
GE E E +E GK+ E D+ E E + +G+ E
Sbjct: 766 GEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKE 809
Score = 37.0 bits (84), Expect = 0.063
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 16/94 (17%)
Query: 110 EDGE----EGEEEEEE-DEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGES 164
E+GE EGE E+EE + ++E+R AG EK E E D+ +ET GE
Sbjct: 757 EEGEGEEVEGEREKEEGERKKEER----AGKEEKGEEEGDQ-----GEGEEEETEGRGEE 807
Query: 165 EEAAREAGGGKDGCREDRVENETRPQKRKGQRSE 198
+E E GG+ E + E E ++ +G+ E
Sbjct: 808 KEEGGEVEGGE--VEEGKGEREEEEEEGEGEEEE 839
Score = 37.0 bits (84), Expect = 0.063
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAR 169
E EEGE E EE+E E K E+ G + E EE +E E EE
Sbjct: 903 EGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEG 962
Query: 170 EAGGGKDGCRE-DRVENETRPQKRKGQRSE 198
E G ++G E + E E ++ +G+ E
Sbjct: 963 EGEGEEEGEGEGEEGEGEGEEEEGEGEGEE 992
Score = 37.0 bits (84), Expect = 0.063
Identities = 26/86 (30%), Positives = 35/86 (40%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAR 169
E+GE EEE E+ E E E+ G G E E E + E E + E E
Sbjct: 915 EEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEG 974
Query: 170 EAGGGKDGCREDRVENETRPQKRKGQ 195
E G G+ E E E + +G+
Sbjct: 975 EEGEGEGEEEEGEGEGEEEEGEEEGE 1000
Score = 37.0 bits (84), Expect = 0.063
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 110 EDGE-EGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAA 168
E+GE EGE+ E E EEEE +G E EE +E GE EE
Sbjct: 935 EEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEE 994
Query: 169 REAGGGKDGCREDRVENE 186
E G ++G E+ E E
Sbjct: 995 GEEEGEEEGEGEEEGEGE 1012
Score = 36.2 bits (82), Expect = 0.11
Identities = 31/94 (32%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Query: 110 EDGEEGEEE-----EEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGES 164
E+GE EEE EEE EE E E+G G E E E + E +E GE
Sbjct: 845 EEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEG 904
Query: 165 EEAAREAGGGKDGCREDRVENETRPQKRKGQRSE 198
EE G ++G E + E E + +G+ E
Sbjct: 905 EEEGEGEGEEEEG--EGKGEEEGEEGEGEGEEEE 936
Score = 36.2 bits (82), Expect = 0.11
Identities = 26/86 (30%), Positives = 36/86 (41%)
Query: 113 EEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAREAG 172
EEGE E EE+ E E E+ G G E+ E + E E E EE G
Sbjct: 898 EEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEG 957
Query: 173 GGKDGCREDRVENETRPQKRKGQRSE 198
++G E E E ++ +G+ E
Sbjct: 958 EEEEGEGEGEEEGEGEGEEGEGEGEE 983
Score = 36.2 bits (82), Expect = 0.11
Identities = 24/72 (33%), Positives = 31/72 (43%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAR 169
E+ EGE EEEE+ E E +G G E E E + E +E E N EE
Sbjct: 1006 EEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEE 1065
Query: 170 EAGGGKDGCRED 181
E + G E+
Sbjct: 1066 EGKYQETGEEEN 1077
Score = 35.4 bits (80), Expect = 0.18
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 20/89 (22%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAR 169
E+G G E +++E E+ +D G G E+ P E GE E A +
Sbjct: 660 EEGSSGAEHWQDEEREKGEKDKGRGEMER----------------PGE----GEKELAEK 699
Query: 170 EAGGGKDGCREDRVENETRPQKRKGQRSE 198
E +DG +++ E E QK + Q E
Sbjct: 700 EEWKKRDGEEQEQKEREQGHQKERNQEME 728
Score = 33.9 bits (76), Expect = 0.53
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 111 DGEEGEEEEEEDEEEEKREDG-GAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAR 169
+GE EEEE E E E + E+G G G E+ E E + E + E EE
Sbjct: 1010 EGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKY 1069
Query: 170 EAGGGKDGCREDRVE 184
+ G ++ R+D E
Sbjct: 1070 QETGEEENERQDGEE 1084
Score = 32.7 bits (73), Expect = 1.2
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 110 EDGEEGEEE---EEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEE 166
E+GE +EE +EE EEE D G G E+ E + + E + GE EE
Sbjct: 771 EEGERKKEERAGKEEKGEEE--GDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREE 828
Query: 167 AAREAGGGKDGCREDRVENETRPQKRKGQRSE 198
E G ++ + E E ++ +G+ E
Sbjct: 829 EEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEE 860
Score = 32.7 bits (73), Expect = 1.2
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 110 EDGEEG-EEEEEEDEEEEKREDG-GAGSTEKVEPE-EDRELAPTSRESPQE-TNPPGESE 165
E+GE EEEE E + EE+ E+G G G E+ E E ED E E E GE E
Sbjct: 906 EEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGE 965
Query: 166 EAAREAGGGKDGCRE-DRVENETRPQKRKGQ 195
G G++G E + E E ++ +G+
Sbjct: 966 GEEEGEGEGEEGEGEGEEEEGEGEGEEEEGE 996
Score = 32.0 bits (71), Expect = 2.0
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
Query: 110 EDGEEGEEE----------EEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETN 159
E+GEE E+E EEE+EEE K ++ G E+ + EE ++++ +
Sbjct: 1041 EEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEENERQDGEEYKKVSKIKGSVKYGKH 1100
Query: 160 PPGESEEAAREAGGGKD 176
+ + G GK+
Sbjct: 1101 KTYQKKSVTNTQGNGKE 1117
>gi|42476169 Paf1, RNA polymerase II associated factor, homolog
[Homo sapiens]
Length = 531
Score = 45.4 bits (106), Expect = 2e-04
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 111 DGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAARE 170
+ E EEEEEE+ E E++E GG+ ++ ++E + + G+ +EA+ +
Sbjct: 372 ENHEPEEEEEEEMETEEKEAGGSDEEQEKGSSSEKEGSEDEHSGSESEREEGDRDEASDK 431
Query: 171 AGGGKDGCRED 181
+G G+D ED
Sbjct: 432 SGSGEDESSED 442
Score = 32.0 bits (71), Expect = 2.0
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 117 EEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAREAGGGKD 176
+ + +E+E + ++ E EPEE+ E +E G EE + + K+
Sbjct: 352 KHRDMNEKELEAQEARKAQLENHEPEEEEE----EEMETEEKEAGGSDEEQEKGSSSEKE 407
Query: 177 GCREDRVENETRPQKRKGQRSEAA 200
G ++ +E+ ++ +G R EA+
Sbjct: 408 GSEDEHSGSES--EREEGDRDEAS 429
Score = 30.8 bits (68), Expect = 4.5
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 112 GEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAA-RE 170
G + E+E+ E+E ED +GS E E DR+ A S ++ + E+ A +E
Sbjct: 393 GSDEEQEKGSSSEKEGSEDEHSGS-ESEREEGDRDEASDKSGSGEDESSEDEARAARDKE 451
Query: 171 AGGGKDGCREDRV--ENETRPQKRKGQRSEA 199
G D ED ++E R Q + G +++
Sbjct: 452 EIFGSDADSEDDADSDDEDRGQAQGGSDNDS 482
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 45.1 bits (105), Expect = 2e-04
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 90 GDNPPLHLRDLSPYISFVSLEDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAP 149
G+ P P S +D ++ E +EEE+EEEE+ E+ E + EE+ +L
Sbjct: 416 GEGPSGMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEE------EATDSEEEEDL-- 467
Query: 150 TSRESPQETNPPGESEEAAREAGGGKDG 177
E QE E E+ EA GKDG
Sbjct: 468 ---EQMQEGQEDDEEEDEEEEAAAGKDG 492
Score = 34.3 bits (77), Expect = 0.41
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 109 LEDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAP---TSRESPQETN 159
+++G+E +EEE+E+EE +DG ++ ++ L P SR S ++ N
Sbjct: 470 MQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSGEQQN 523
Score = 33.1 bits (74), Expect = 0.90
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESP--QETNPPGESEEA 167
ED E+ +E +E+DEEE++ E+ AG P +++ P Q + GE +
Sbjct: 465 EDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSGEQQNK 524
Query: 168 AR 169
R
Sbjct: 525 GR 526
>gi|215422388 death-domain associated protein isoform a [Homo
sapiens]
Length = 740
Score = 45.1 bits (105), Expect = 2e-04
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 90 GDNPPLHLRDLSPYISFVSLEDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAP 149
G+ P P S +D ++ E +EEE+EEEE+ E+ E + EE+ +L
Sbjct: 416 GEGPSGMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEE------EATDSEEEEDL-- 467
Query: 150 TSRESPQETNPPGESEEAAREAGGGKDG 177
E QE E E+ EA GKDG
Sbjct: 468 ---EQMQEGQEDDEEEDEEEEAAAGKDG 492
Score = 34.3 bits (77), Expect = 0.41
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 109 LEDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAP---TSRESPQETN 159
+++G+E +EEE+E+EE +DG ++ ++ L P SR S ++ N
Sbjct: 470 MQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSGEQQN 523
Score = 33.1 bits (74), Expect = 0.90
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESP--QETNPPGESEEA 167
ED E+ +E +E+DEEE++ E+ AG P +++ P Q + GE +
Sbjct: 465 EDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSGEQQNK 524
Query: 168 AR 169
R
Sbjct: 525 GR 526
>gi|215422366 death-domain associated protein isoform b [Homo
sapiens]
Length = 752
Score = 45.1 bits (105), Expect = 2e-04
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 90 GDNPPLHLRDLSPYISFVSLEDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAP 149
G+ P P S +D ++ E +EEE+EEEE+ E+ E + EE+ +L
Sbjct: 428 GEGPSGMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEE------EATDSEEEEDL-- 479
Query: 150 TSRESPQETNPPGESEEAAREAGGGKDG 177
E QE E E+ EA GKDG
Sbjct: 480 ---EQMQEGQEDDEEEDEEEEAAAGKDG 504
Score = 34.3 bits (77), Expect = 0.41
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 109 LEDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAP---TSRESPQETN 159
+++G+E +EEE+E+EE +DG ++ ++ L P SR S ++ N
Sbjct: 482 MQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSGEQQN 535
Score = 33.1 bits (74), Expect = 0.90
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESP--QETNPPGESEEA 167
ED E+ +E +E+DEEE++ E+ AG P +++ P Q + GE +
Sbjct: 477 EDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSGEQQNK 536
Query: 168 AR 169
R
Sbjct: 537 GR 538
>gi|218505694 potassium channel tetramerisation domain containing 1
isoform b [Homo sapiens]
Length = 865
Score = 44.7 bits (104), Expect = 3e-04
Identities = 27/63 (42%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 112 GEEGEEEEEEDE--------EEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGE 163
GEE EEEEEEDE +EE+ EDGG G E E EE+ E+ E + + GE
Sbjct: 54 GEEEEEEEEEDEIQEVQITGDEEEEEDGGGGLEEDEEEEEEEEMGLDWDEPLEPEDSAGE 113
Query: 164 SEE 166
E
Sbjct: 114 ELE 116
Score = 35.4 bits (80), Expect = 0.18
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 12/78 (15%)
Query: 112 GEEGEEEE-----EEDEEEEKREDGGAGSTEKVEPEED--RELAP-----TSRESPQETN 159
G+E EEE+ EEDEEEE+ E+ G E +EPE+ EL P + +
Sbjct: 73 GDEEEEEDGGGGLEEDEEEEEEEEMGLDWDEPLEPEDSAGEELEPEPVHMINMDQSAALE 132
Query: 160 PPGESEEAAREAGGGKDG 177
P A A GG G
Sbjct: 133 PEAPPRLLAPRARGGPPG 150
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 44.3 bits (103), Expect = 4e-04
Identities = 42/139 (30%), Positives = 59/139 (42%), Gaps = 19/139 (13%)
Query: 71 LGQGAEPGPGPGLGTAWLLGDNPPLHLRDLSPY---ISFVSLEDGEEGEEEEEEDEEEEK 127
LG G +P + LL D L+D+S S E G EEE+EEEE+
Sbjct: 233 LGDGRKPVKEEKMEERDLLSD-----LQDISDSERKTSSAESSSAESGSGSEEEEEEEEE 287
Query: 128 REDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAREAGGGKDGCREDR----- 182
E+ G+ S E E EE+ E E +N SE++A E + E+R
Sbjct: 288 EEEEGSTSEESEEEEEEEE----EEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENH 343
Query: 183 --VENETRPQKRKGQRSEA 199
V E+R + G+ EA
Sbjct: 344 LLVVPESRFDRDSGESEEA 362
Score = 37.7 bits (86), Expect = 0.037
Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 18/83 (21%)
Query: 110 EDGEEGE--EEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQE---------- 157
E+ EEG EE EE+EEEE+ E+ GS + E+ E S E
Sbjct: 287 EEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLV 346
Query: 158 ------TNPPGESEEAAREAGGG 174
GESEEA E G G
Sbjct: 347 VPESRFDRDSGESEEAEEEVGEG 369
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 44.3 bits (103), Expect = 4e-04
Identities = 42/139 (30%), Positives = 59/139 (42%), Gaps = 19/139 (13%)
Query: 71 LGQGAEPGPGPGLGTAWLLGDNPPLHLRDLSPY---ISFVSLEDGEEGEEEEEEDEEEEK 127
LG G +P + LL D L+D+S S E G EEE+EEEE+
Sbjct: 243 LGDGRKPVKEEKMEERDLLSD-----LQDISDSERKTSSAESSSAESGSGSEEEEEEEEE 297
Query: 128 REDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAREAGGGKDGCREDR----- 182
E+ G+ S E E EE+ E E +N SE++A E + E+R
Sbjct: 298 EEEEGSTSEESEEEEEEEE----EEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENH 353
Query: 183 --VENETRPQKRKGQRSEA 199
V E+R + G+ EA
Sbjct: 354 LLVVPESRFDRDSGESEEA 372
Score = 37.7 bits (86), Expect = 0.037
Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 18/83 (21%)
Query: 110 EDGEEGE--EEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQE---------- 157
E+ EEG EE EE+EEEE+ E+ GS + E+ E S E
Sbjct: 297 EEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLV 356
Query: 158 ------TNPPGESEEAAREAGGG 174
GESEEA E G G
Sbjct: 357 VPESRFDRDSGESEEAEEEVGEG 379
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 44.3 bits (103), Expect = 4e-04
Identities = 42/139 (30%), Positives = 59/139 (42%), Gaps = 19/139 (13%)
Query: 71 LGQGAEPGPGPGLGTAWLLGDNPPLHLRDLSPY---ISFVSLEDGEEGEEEEEEDEEEEK 127
LG G +P + LL D L+D+S S E G EEE+EEEE+
Sbjct: 234 LGDGRKPVKEEKMEERDLLSD-----LQDISDSERKTSSAESSSAESGSGSEEEEEEEEE 288
Query: 128 REDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAREAGGGKDGCREDR----- 182
E+ G+ S E E EE+ E E +N SE++A E + E+R
Sbjct: 289 EEEEGSTSEESEEEEEEEE----EEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENH 344
Query: 183 --VENETRPQKRKGQRSEA 199
V E+R + G+ EA
Sbjct: 345 LLVVPESRFDRDSGESEEA 363
Score = 37.7 bits (86), Expect = 0.037
Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 18/83 (21%)
Query: 110 EDGEEGE--EEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQE---------- 157
E+ EEG EE EE+EEEE+ E+ GS + E+ E S E
Sbjct: 288 EEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLV 347
Query: 158 ------TNPPGESEEAAREAGGG 174
GESEEA E G G
Sbjct: 348 VPESRFDRDSGESEEAEEEVGEG 370
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 44.3 bits (103), Expect = 4e-04
Identities = 42/139 (30%), Positives = 59/139 (42%), Gaps = 19/139 (13%)
Query: 71 LGQGAEPGPGPGLGTAWLLGDNPPLHLRDLSPY---ISFVSLEDGEEGEEEEEEDEEEEK 127
LG G +P + LL D L+D+S S E G EEE+EEEE+
Sbjct: 243 LGDGRKPVKEEKMEERDLLSD-----LQDISDSERKTSSAESSSAESGSGSEEEEEEEEE 297
Query: 128 REDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAREAGGGKDGCREDR----- 182
E+ G+ S E E EE+ E E +N SE++A E + E+R
Sbjct: 298 EEEEGSTSEESEEEEEEEE----EEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENH 353
Query: 183 --VENETRPQKRKGQRSEA 199
V E+R + G+ EA
Sbjct: 354 LLVVPESRFDRDSGESEEA 372
Score = 37.7 bits (86), Expect = 0.037
Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 18/83 (21%)
Query: 110 EDGEEGE--EEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQE---------- 157
E+ EEG EE EE+EEEE+ E+ GS + E+ E S E
Sbjct: 297 EEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLV 356
Query: 158 ------TNPPGESEEAAREAGGG 174
GESEEA E G G
Sbjct: 357 VPESRFDRDSGESEEAEEEVGEG 379
>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
5 [Homo sapiens]
Length = 748
Score = 44.3 bits (103), Expect = 4e-04
Identities = 42/139 (30%), Positives = 59/139 (42%), Gaps = 19/139 (13%)
Query: 71 LGQGAEPGPGPGLGTAWLLGDNPPLHLRDLSPY---ISFVSLEDGEEGEEEEEEDEEEEK 127
LG G +P + LL D L+D+S S E G EEE+EEEE+
Sbjct: 211 LGDGRKPVKEEKMEERDLLSD-----LQDISDSERKTSSAESSSAESGSGSEEEEEEEEE 265
Query: 128 REDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAREAGGGKDGCREDR----- 182
E+ G+ S E E EE+ E E +N SE++A E + E+R
Sbjct: 266 EEEEGSTSEESEEEEEEEE----EEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENH 321
Query: 183 --VENETRPQKRKGQRSEA 199
V E+R + G+ EA
Sbjct: 322 LLVVPESRFDRDSGESEEA 340
Score = 37.7 bits (86), Expect = 0.037
Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 18/83 (21%)
Query: 110 EDGEEGE--EEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQE---------- 157
E+ EEG EE EE+EEEE+ E+ GS + E+ E S E
Sbjct: 265 EEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLV 324
Query: 158 ------TNPPGESEEAAREAGGG 174
GESEEA E G G
Sbjct: 325 VPESRFDRDSGESEEAEEEVGEG 347
>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
4 [Homo sapiens]
Length = 737
Score = 44.3 bits (103), Expect = 4e-04
Identities = 42/139 (30%), Positives = 59/139 (42%), Gaps = 19/139 (13%)
Query: 71 LGQGAEPGPGPGLGTAWLLGDNPPLHLRDLSPY---ISFVSLEDGEEGEEEEEEDEEEEK 127
LG G +P + LL D L+D+S S E G EEE+EEEE+
Sbjct: 200 LGDGRKPVKEEKMEERDLLSD-----LQDISDSERKTSSAESSSAESGSGSEEEEEEEEE 254
Query: 128 REDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAREAGGGKDGCREDR----- 182
E+ G+ S E E EE+ E E +N SE++A E + E+R
Sbjct: 255 EEEEGSTSEESEEEEEEEE----EEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENH 310
Query: 183 --VENETRPQKRKGQRSEA 199
V E+R + G+ EA
Sbjct: 311 LLVVPESRFDRDSGESEEA 329
Score = 37.7 bits (86), Expect = 0.037
Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 18/83 (21%)
Query: 110 EDGEEGE--EEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQE---------- 157
E+ EEG EE EE+EEEE+ E+ GS + E+ E S E
Sbjct: 254 EEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLV 313
Query: 158 ------TNPPGESEEAAREAGGG 174
GESEEA E G G
Sbjct: 314 VPESRFDRDSGESEEAEEEVGEG 336
>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
2 [Homo sapiens]
Length = 782
Score = 44.3 bits (103), Expect = 4e-04
Identities = 42/139 (30%), Positives = 59/139 (42%), Gaps = 19/139 (13%)
Query: 71 LGQGAEPGPGPGLGTAWLLGDNPPLHLRDLSPY---ISFVSLEDGEEGEEEEEEDEEEEK 127
LG G +P + LL D L+D+S S E G EEE+EEEE+
Sbjct: 245 LGDGRKPVKEEKMEERDLLSD-----LQDISDSERKTSSAESSSAESGSGSEEEEEEEEE 299
Query: 128 REDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAREAGGGKDGCREDR----- 182
E+ G+ S E E EE+ E E +N SE++A E + E+R
Sbjct: 300 EEEEGSTSEESEEEEEEEE----EEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENH 355
Query: 183 --VENETRPQKRKGQRSEA 199
V E+R + G+ EA
Sbjct: 356 LLVVPESRFDRDSGESEEA 374
Score = 37.7 bits (86), Expect = 0.037
Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 18/83 (21%)
Query: 110 EDGEEGE--EEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQE---------- 157
E+ EEG EE EE+EEEE+ E+ GS + E+ E S E
Sbjct: 299 EEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLV 358
Query: 158 ------TNPPGESEEAAREAGGG 174
GESEEA E G G
Sbjct: 359 VPESRFDRDSGESEEAEEEVGEG 381
>gi|13540523 nucleosomal binding protein 1 [Homo sapiens]
Length = 282
Score = 43.9 bits (102), Expect = 5e-04
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 109 LEDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAA 168
+++ EE ++E+EED+ EEK E G EK EED + E ++ + ++
Sbjct: 123 VKNEEEDQKEDEEDQNEEKGEAGKEDKDEK--GEEDGKEDKNGNEKGEDAKEKEDGKKGE 180
Query: 169 REAGGGKDGCR--EDRVENETRPQKRKGQRSE 198
G G+DG ED E E R + G+ +E
Sbjct: 181 DGKGNGEDGKEKGEDEKEEEDRKETGDGKENE 212
Score = 43.5 bits (101), Expect = 7e-04
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSR-ESPQETNPPGESEEAA 168
EDG+E + E+ E+ +++EDG G K E+ +E + E ++ G+ E
Sbjct: 155 EDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENEDG 214
Query: 169 REAGGGKDG----CREDRVENETRPQKRKGQRSEA 199
+E G K+G +ED E E + G EA
Sbjct: 215 KEKGDKKEGKDVKVKEDEKEREDGKEDEGGNEEEA 249
Score = 36.6 bits (83), Expect = 0.082
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 110 EDGEEGEEEEEEDEEEEKREDG--GAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEA 167
EDG+E E+E+E+E+ ++ DG EK + +E +++ E +E G+ +E
Sbjct: 187 EDGKEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVKEDEKERE---DGKEDEG 243
Query: 168 AREAGGGKDGCREDRVENE 186
E GK+ +ED E E
Sbjct: 244 GNEEEAGKE--KEDLKEEE 260
Score = 32.0 bits (71), Expect = 2.0
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEE 166
++G++ + +E+E E E+ +ED G E + +ED + +E + G+ EE
Sbjct: 221 KEGKDVKVKEDEKEREDGKEDEGGNEEEAGKEKEDLKEEEEGKEEDEIKEDDGKKEE 277
>gi|21735569 claspin [Homo sapiens]
Length = 1339
Score = 43.9 bits (102), Expect = 5e-04
Identities = 26/58 (44%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEA 167
EDG E EEEEEE+ +E EDG EKVE EE E E +E G E A
Sbjct: 625 EDGFEEEEEEEEEMTDESEEDG----EEKVEKEEKEEELEEEEEKEEEEEEEGNQETA 678
Score = 34.3 bits (77), Expect = 0.41
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 14/64 (21%)
Query: 108 SLEDGEEGEE--------EEEEDEEEEKREDGGAG------STEKVEPEEDRELAPTSRE 153
S EDGEE E EEEE++EEE+ E+G S+E++E ++++E+ + +
Sbjct: 642 SEEDGEEKVEKEEKEEELEEEEEKEEEEEEEGNQETAEFLLSSEEIETKDEKEMDKENND 701
Query: 154 SPQE 157
E
Sbjct: 702 GSSE 705
>gi|148727368 bromodomain and PHD finger containing, 3 [Homo
sapiens]
Length = 1205
Score = 43.9 bits (102), Expect = 5e-04
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 81 PGLGTAWLLGDNPPLHLRDLSPYISFVSLEDGEEGEEEEEEDEEEEKREDGG-AGSTEKV 139
PG TA GD+P R +S L++G+ EEEEEE EEEE+ GG +GS + V
Sbjct: 389 PGAATARRKGDSP----RSISETGDEEGLKEGDGEEEEEEEVEEEEQEAQGGVSGSLKGV 444
Query: 140 EPEEDRELAPTSRESPQE 157
+ L ++ P+E
Sbjct: 445 PKKSKMSLKQKIKKEPEE 462
>gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member A [Homo sapiens]
Length = 249
Score = 43.5 bits (101), Expect = 7e-04
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 11/88 (12%)
Query: 114 EGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAREAGG 173
EG ++EEEDE+EE+ ++ + VE EED + E +E + GE EE + G
Sbjct: 165 EGLDDEEEDEDEEEYDE----DAQVVEDEEDED----EEEEGEEEDVSGEEEE---DEEG 213
Query: 174 GKDGCREDRVENETRPQKRKGQRSEAAP 201
DG +D + E ++ +GQ+ + P
Sbjct: 214 YNDGEVDDEEDEEELGEEERGQKRKREP 241
Score = 38.1 bits (87), Expect = 0.028
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 10/67 (14%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGAGSTEKVE----------PEEDRELAPTSRESPQETN 159
ED + E+EE+EDEEEE E+ +G E+ E E++ EL R ++
Sbjct: 181 EDAQVVEDEEDEDEEEEGEEEDVSGEEEEDEEGYNDGEVDDEEDEEELGEEERGQKRKRE 240
Query: 160 PPGESEE 166
P E E+
Sbjct: 241 PEDEGED 247
>gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens]
Length = 543
Score = 43.1 bits (100), Expect = 9e-04
Identities = 35/100 (35%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Query: 101 SPYISFVSLEDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNP 160
S Y S V E E E E EE K E G E E E+D+E A + +E
Sbjct: 441 SYYTSHVQEEQIEVEETIEAAKAEEAKDEPPSEGEAE--EEEKDKEEAEEEEAAEEEEAA 498
Query: 161 PGESEEAAREAGGGKDGCREDRVENETRPQKRKGQRSEAA 200
ESEEA E GG+ E+ E E +K +G E A
Sbjct: 499 KEESEEAKEEEEGGEGEEGEETKEAEEEEKKVEGAGEEQA 538
Score = 32.7 bits (73), Expect = 1.2
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 111 DGEEGEEEEEED--EEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAA 168
+GE EEE++++ EEEE E+ A E E +E+ E E +ET E E+
Sbjct: 473 EGEAEEEEKDKEEAEEEEAAEEEEAAKEESEEAKEEEE--GGEGEEGEETKEAEEEEKKV 530
Query: 169 REAGGGKDGCRED 181
AG + ++D
Sbjct: 531 EGAGEEQAAKKKD 543
Score = 30.0 bits (66), Expect = 7.6
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 110 EDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAR 169
E EE +++EE +EEE E+ A K E EE +E E E EE
Sbjct: 475 EAEEEEKDKEEAEEEEAAEEEEAA----KEESEEAKEEEEGGEGEEGEETKEAEEEEKKV 530
Query: 170 EAGGGKDGCRE 180
E G + ++
Sbjct: 531 EGAGEEQAAKK 541
>gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isoform
3 [Homo sapiens]
Length = 526
Score = 43.1 bits (100), Expect = 9e-04
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 108 SLEDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEA 167
S E G G EEEEE+EEEE+ E + +E+ E EE+ E T S + + +S E
Sbjct: 27 SAESGS-GSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASE---QSAEE 82
Query: 168 AREAGGGKDGCREDR----VENETRPQKRKGQRSEA 199
E +D RE+ V E+R + G+ EA
Sbjct: 83 VSEEEMSEDEERENENHLLVVPESRFDRDSGESEEA 118
Score = 37.7 bits (86), Expect = 0.037
Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 18/83 (21%)
Query: 110 EDGEEGE--EEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQE---------- 157
E+ EEG EE EE+EEEE+ E+ GS + E+ E S E
Sbjct: 43 EEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLV 102
Query: 158 ------TNPPGESEEAAREAGGG 174
GESEEA E G G
Sbjct: 103 VPESRFDRDSGESEEAEEEVGEG 125
Score = 37.0 bits (84), Expect = 0.063
Identities = 22/82 (26%), Positives = 31/82 (37%), Gaps = 3/82 (3%)
Query: 117 EEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEAAREAGGGKD 176
E + E E G E+ E EE+ E TS ES +E E EE E G +
Sbjct: 17 ERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEE---EEEEEEEETGSNSE 73
Query: 177 GCREDRVENETRPQKRKGQRSE 198
E E + + + + E
Sbjct: 74 EASEQSAEEVSEEEMSEDEERE 95
Score = 34.7 bits (78), Expect = 0.31
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 108 SLEDGEEGEEEEEEDEEEEKREDGGAGSTEKVEPEEDRELAPTSRESPQETNPPGESEEA 167
S E E+EEEE+ E+ GST + EE+ E E +E SEEA
Sbjct: 22 SAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEE------EEEEEEETGSNSEEA 75
Query: 168 AREAGGGKDGCREDRVENETR 188
+ ++ ++ E+ E+E R
Sbjct: 76 SEQS--AEEVSEEEMSEDEER 94
>gi|4758392 forkhead box D1 [Homo sapiens]
Length = 465
Score = 43.1 bits (100), Expect = 9e-04
Identities = 32/87 (36%), Positives = 39/87 (44%), Gaps = 27/87 (31%)
Query: 115 GEEEEEEDEEEEKREDGGAG---------------------STEKVEPEEDRE---LAPT 150
GE E+EEDEEEE ++GG G E +E EED + LAP
Sbjct: 23 GEGEDEEDEEEEDDDEGGGGGPRLAVPAQRRRRRRSYAGEDELEDLEEEEDDDDILLAPP 82
Query: 151 SRESPQETNPPGESEEAAREAGGGKDG 177
+ SP PPG + A AGGG G
Sbjct: 83 AGGSPA---PPGPAPAAGAGAGGGGGG 106
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,115,604
Number of Sequences: 37866
Number of extensions: 2205556
Number of successful extensions: 44362
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 611
Number of HSP's that attempted gapping in prelim test: 26210
Number of HSP's gapped (non-prelim): 11017
length of query: 703
length of database: 18,247,518
effective HSP length: 109
effective length of query: 594
effective length of database: 14,120,124
effective search space: 8387353656
effective search space used: 8387353656
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.