Guide to the Human Genome
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Name: ANP32A Sequence: fasta or formatted (249aa) NCBI GI: 5453880
Description:

acidic (leucine-rich) nuclear phosphoprotein 32 family, member A

Referenced in:

Cerebellum
HLA and Related Proteins
Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.0          5           1
 C cysteine            0.8          2           1
 D aspartate          12.9         32           3
 E glutamate          22.9         57           4
 F phenylalanine       1.6          4           1
 G glycine             6.8         17           2
 H histidine           0.8          2           1
 I isoleucine          2.0          5           1
 K lysine              6.4         16           2
 L leucine            12.9         32           2
 M methionine          0.8          2           1
 N asparagine          6.4         16           1
 P proline             2.8          7           1
 Q glutamine           1.2          3           1
 R arginine            4.4         11           2
 S serine              4.8         12           1
 T threonine           3.2          8           1
 V valine              4.8         12           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.4          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acidic (leucine-rich) nuclear phosphoprotein 32 famil... 
ANP32C                0.764   acidic nuclear phosphoprotein 32C 
ANP32B                0.678   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
ANP32E                0.575   acidic (leucine-rich) nuclear phosphoprotein 32 fami...
LOC647020             0.516   PREDICTED: similar to acidic (leucine-rich) nuclear...
LOC647020             0.516   PREDICTED: similar to acidic (leucine-rich) nuclear...
ANP32E                0.455   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
ANP32D                0.436   acidic nuclear phosphoprotein 32D 
LOC647020             0.381   PREDICTED: similar to hCG1791241 
ANP32E                0.349   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
RPGR                  0.107   retinitis pigmentosa GTPase regulator isoform C [Hom...
MYT1L                 0.095   myelin transcription factor 1-like 
EIF5B                 0.095   eukaryotic translation initiation factor 5B 
PELP1                 0.095   proline, glutamic acid and leucine rich protein 1 [...
CENPB                 0.086   centromere protein B 
LRRC6                 0.084   leucine rich repeat containing 6 
YTHDC1                0.084   splicing factor YT521-B isoform 2 
CEP110                0.084   centrosomal protein 110kDa 
YTHDC1                0.084   splicing factor YT521-B isoform 1 
NCL                   0.082   nucleolin 
CDC2L2                0.078   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.078   cell division cycle 2-like 2 isoform 1 
MYT1                  0.078   myelin transcription factor 1 
CDC2L1                0.078   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.078   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.078   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.078   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.078   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.078   cell division cycle 2-like 1 (PITSLRE proteins) isof...
TSPYL2                0.078   TSPY-like 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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