Guide to the Human Genome
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Name: ZMYND15 Sequence: fasta or formatted (703aa) NCBI GI: 14149999
Description:

zinc finger, MYND-type containing 15 isoform 2

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt prot [742aa] zinc finger, MYND-type containing 15 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         53           2
 C cysteine            2.3         16           1
 D aspartate           4.4         31           2
 E glutamate           8.1         57           6
 F phenylalanine       4.3         30           2
 G glycine             9.8         69           3
 H histidine           2.6         18           1
 I isoleucine          1.7         12           1
 K lysine              3.4         24           2
 L leucine            10.4         73           3
 M methionine          1.6         11           1
 N asparagine          1.7         12           1
 P proline             9.8         69           4
 Q glutamine           3.6         25           1
 R arginine            8.4         59           4
 S serine              7.0         49           2
 T threonine           5.0         35           1
 V valine              5.3         37           2
 W tryptophan          1.7         12           1
 Y tyrosine            1.6         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, MYND-type containing 15 isoform 2 [Homo... 
ZMYND15               0.985   zinc finger, MYND-type containing 15 isoform 1 [Hom...
YTHDC1                0.016   splicing factor YT521-B isoform 2 
YTHDC1                0.016   splicing factor YT521-B isoform 1 
CENPB                 0.015   centromere protein B 
ACIN1                 0.015   apoptotic chromatin condensation inducer 1 
NEFM                  0.015   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.015   neurofilament, medium polypeptide 150kDa isoform 2 ...
MYST4                 0.015   MYST histone acetyltransferase (monocytic leukemia)...
PRM3                  0.015   protamine 3 
RPGR                  0.014   retinitis pigmentosa GTPase regulator isoform C [Hom...
PAF1                  0.014   Paf1, RNA polymerase II associated factor, homolog [...
DAXX                  0.014   death-domain associated protein isoform a 
DAXX                  0.014   death-domain associated protein isoform a 
DAXX                  0.014   death-domain associated protein isoform b 
KCTD1                 0.014   potassium channel tetramerisation domain containing...
CDC2L2                0.013   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.013   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.013   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.013   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.013   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.013   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.013   cell division cycle 2-like 1 (PITSLRE proteins) isof...
NSBP1                 0.013   nucleosomal binding protein 1 
CLSPN                 0.013   claspin 
BRPF3                 0.013   bromodomain and PHD finger containing, 3 
ANP32A                0.013   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
NEFL                  0.013   neurofilament, light polypeptide 68kDa 
CDC2L1                0.013   cell division cycle 2-like 1 (PITSLRE proteins) isof...
FOXD1                 0.013   forkhead box D1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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