Guide to the Human Genome
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Search of human proteins with 8922277

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|8922277 transmembrane protein 51 [Homo sapiens]
         (253 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|209977056 transmembrane protein 51 [Homo sapiens]                  507   e-144
gi|209977054 transmembrane protein 51 [Homo sapiens]                  507   e-144
gi|209977052 transmembrane protein 51 [Homo sapiens]                  507   e-144
gi|8922277 transmembrane protein 51 [Homo sapiens]                    507   e-144
gi|62241003 cardiomyopathy associated 5 [Homo sapiens]                 45   5e-05
gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens]           42   4e-04
gi|60460889 Myb protein P42POP [Homo sapiens]                          41   9e-04
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho...    39   0.006
gi|34482047 adaptor-related protein complex 3, beta 2 subunit [H...    37   0.016
gi|55741677 SET domain containing 1A [Homo sapiens]                    37   0.016
gi|239050813 lipoxygenase homology domains 1 isoform 1 [Homo sap...    37   0.016
gi|51873049 hypothetical protein LOC8603 [Homo sapiens]                37   0.016
gi|116875765 tight junction protein 1 isoform b [Homo sapiens]         37   0.022
gi|116875767 tight junction protein 1 isoform a [Homo sapiens]         37   0.022
gi|4557543 extracellular matrix protein 2 precursor [Homo sapiens]     35   0.048
gi|7657465 podocalyxin-like 2 [Homo sapiens]                           35   0.063
gi|78042577 MAP7 domain containing 1 [Homo sapiens]                    35   0.063
gi|110349719 titin isoform N2-A [Homo sapiens]                         35   0.082
gi|110349786 Alstrom syndrome 1 [Homo sapiens]                         35   0.082
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]       35   0.082
gi|32698902 transmembrane protein 61 [Homo sapiens]                    35   0.082
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]         34   0.11 
gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [H...    34   0.11 
gi|66472382 nischarin [Homo sapiens]                                   34   0.14 
gi|31377846 WD repeat domain 52 [Homo sapiens]                         34   0.14 
gi|169636420 carbonic anhydrase IX precursor [Homo sapiens]            33   0.18 
gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homo...    33   0.18 
gi|167234422 hematopoietic cell-specific Lyn substrate 1 [Homo s...    33   0.18 
gi|56118221 amyloid beta (A4) precursor protein-binding, family ...    33   0.24 
gi|51873055 fibulin 2 isoform b precursor [Homo sapiens]               33   0.24 

>gi|209977056 transmembrane protein 51 [Homo sapiens]
          Length = 253

 Score =  507 bits (1305), Expect = e-144
 Identities = 253/253 (100%), Positives = 253/253 (100%)

Query: 1   MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS 60
           MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS
Sbjct: 1   MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS 60

Query: 61  KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE 120
           KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE
Sbjct: 61  KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE 120

Query: 121 EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE 180
           EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE
Sbjct: 121 EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE 180

Query: 181 ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD 240
           ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD
Sbjct: 181 ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD 240

Query: 241 EVQEKAPDTRPPD 253
           EVQEKAPDTRPPD
Sbjct: 241 EVQEKAPDTRPPD 253


>gi|209977054 transmembrane protein 51 [Homo sapiens]
          Length = 253

 Score =  507 bits (1305), Expect = e-144
 Identities = 253/253 (100%), Positives = 253/253 (100%)

Query: 1   MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS 60
           MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS
Sbjct: 1   MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS 60

Query: 61  KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE 120
           KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE
Sbjct: 61  KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE 120

Query: 121 EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE 180
           EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE
Sbjct: 121 EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE 180

Query: 181 ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD 240
           ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD
Sbjct: 181 ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD 240

Query: 241 EVQEKAPDTRPPD 253
           EVQEKAPDTRPPD
Sbjct: 241 EVQEKAPDTRPPD 253


>gi|209977052 transmembrane protein 51 [Homo sapiens]
          Length = 253

 Score =  507 bits (1305), Expect = e-144
 Identities = 253/253 (100%), Positives = 253/253 (100%)

Query: 1   MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS 60
           MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS
Sbjct: 1   MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS 60

Query: 61  KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE 120
           KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE
Sbjct: 61  KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE 120

Query: 121 EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE 180
           EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE
Sbjct: 121 EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE 180

Query: 181 ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD 240
           ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD
Sbjct: 181 ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD 240

Query: 241 EVQEKAPDTRPPD 253
           EVQEKAPDTRPPD
Sbjct: 241 EVQEKAPDTRPPD 253


>gi|8922277 transmembrane protein 51 [Homo sapiens]
          Length = 253

 Score =  507 bits (1305), Expect = e-144
 Identities = 253/253 (100%), Positives = 253/253 (100%)

Query: 1   MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS 60
           MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS
Sbjct: 1   MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS 60

Query: 61  KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE 120
           KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE
Sbjct: 61  KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE 120

Query: 121 EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE 180
           EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE
Sbjct: 121 EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE 180

Query: 181 ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD 240
           ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD
Sbjct: 181 ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD 240

Query: 241 EVQEKAPDTRPPD 253
           EVQEKAPDTRPPD
Sbjct: 241 EVQEKAPDTRPPD 253


>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
          Length = 4069

 Score = 45.4 bits (106), Expect = 5e-05
 Identities = 42/179 (23%), Positives = 72/179 (40%), Gaps = 15/179 (8%)

Query: 80  SICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMN 139
           S+   +  + ++++GE +     P+     A+     EEE E+ EA S    P+ E  ++
Sbjct: 599 SVPQDLNHELQEQEGEPVP----PSNVEAIAEHAVLSEEENEEFEAYSPAAAPTSESSLS 654

Query: 140 TNYSEARGEEQNPRLSISLPSYESLTGLDET------TPTSTRADVEASPGNPPDRQNSK 193
            + +E   E Q+P  S   P Y  L+G DE       TP ST A   + P         K
Sbjct: 655 PSTTEKTSENQSPLFSTVTPEYMVLSG-DEASESGCYTPDSTSASEYSVPSLATKESLKK 713

Query: 194 LAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYDEVQEKAPDTRPP 252
              R  PL ++ +    +  ++      D     P++ P + P       EK  + + P
Sbjct: 714 TIDRKSPLILKGVSEYMIPSEE----KEDTGSFTPAVAPASEPSLSPSTTEKTSECQSP 768


>gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens]
          Length = 1219

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 8/145 (5%)

Query: 111  QEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNP--RLSISLPSYESLTGLD 168
            QE++    EEE+E+A  R   PS E+    + S + G+ Q P  R     P   S   ++
Sbjct: 934  QEKEESSSEEEEEKAEERPRRPSQEQ----SASASSGQPQAPLNRERPESPMVPSEQVVE 989

Query: 169  ETTPTSTRADVEASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPP 228
            E  P   +A   +  G+   R+    A+ L  +K   +  E   +   R+  P  ++PP 
Sbjct: 990  EAVPLPPQALTTSQDGH--RRKGDSEAEALSEIKDGSLPPELSCIPSHRVLGPPTSIPPE 1047

Query: 229  SIEPLTPPPQYDEVQEKAPDTRPPD 253
             + P++   + +E    +P    PD
Sbjct: 1048 PLGPVSMDSECEESLAASPMAAKPD 1072


>gi|60460889 Myb protein P42POP [Homo sapiens]
          Length = 399

 Score = 41.2 bits (95), Expect = 9e-04
 Identities = 49/184 (26%), Positives = 63/184 (34%), Gaps = 42/184 (22%)

Query: 90  KQRQGEDLAHVQHPT-GAGPHAQEEDSQEEE-------------------EEDEEAASRY 129
           K+R  E LA V H T GAGP A++  S EEE                   EE   A S  
Sbjct: 84  KRRTKEKLARVPHSTQGAGPAAEDAFSAEEETIFAILGPGVAAPGAGAGAEEPPAAPSSQ 143

Query: 130 YVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVEASPGNP-PD 188
             P          SE R E++    S       S  G     P +  +      G P P 
Sbjct: 144 PPPPSACPQRYVLSEDRREDRRADTSA-----HSKAGSSSPEPWARPSCTPQEGGCPRPK 198

Query: 189 RQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYDEVQEKAPD 248
            + S     L+P+++ R+                   PPP   PL PPP   +V    P 
Sbjct: 199 ERESPPPSALQPVQLPRLALS----------------PPPPAPPLPPPPPLAQVAPSPPS 242

Query: 249 TRPP 252
             PP
Sbjct: 243 PPPP 246


>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
            sapiens]
          Length = 3549

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 6/92 (6%)

Query: 165  TGLDETTPTSTRADVEASPGNPPDRQNSKLAKRLK---PLKVRRIKSEKLHLKDFR-INL 220
            T LDET+  S  ++V  S     +++ +K+AK       +      + + H+K  + I L
Sbjct: 3047 TSLDETS--SKVSNVHVSNNKNSEQKENKIAKEKTVQHQVAAHHEATVRSHVKTHQEIKL 3104

Query: 221  PDKNVPPPSIEPLTPPPQYDEVQEKAPDTRPP 252
             D N+PPPS++   P P +  ++  A  T  P
Sbjct: 3105 DDSNIPPPSLKTRPPSPTFITIESTARRTENP 3136


>gi|34482047 adaptor-related protein complex 3, beta 2 subunit [Homo
           sapiens]
          Length = 1082

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 31/155 (20%), Positives = 65/155 (41%), Gaps = 26/155 (16%)

Query: 87  DKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEAR 146
           D   + + E  +     +G+G  + E D+++++E++E+        S E+      ++ +
Sbjct: 692 DSDPESESESDSKSSSESGSGESSSESDNEDQDEDEEKGRGSESEQSEED--GKRKTKKK 749

Query: 147 GEEQNPRLSISLPSYESLTGLDETTPTSTRADVEASPGN-----PPDRQNSKLAKRLKPL 201
             E+    S S    +S +   E+  TS   + +  P +     PP  +++   K +   
Sbjct: 750 VPERKGEASSSDEGSDSSSSSSESEMTSESEEEQLEPASWSRKTPPSSKSAPATKEI--- 806

Query: 202 KVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPP 236
                    L L+DF          PPS++P++PP
Sbjct: 807 -------SLLDLEDF---------TPPSVQPVSPP 825


>gi|55741677 SET domain containing 1A [Homo sapiens]
          Length = 1707

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 37/163 (22%), Positives = 61/163 (37%), Gaps = 14/163 (8%)

Query: 86   RDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEA 145
            R K + +  +  A       A   +  E  +E++EEDEE   R      EE ++T   E 
Sbjct: 948  RGKTQGKHRKSFALDSEGEEASQESSSEKDEEDDEEDEEDEDR------EEAVDTTKKET 1001

Query: 146  R---GEEQNPRLSISLPSYESLTGLDETTPTSTRADVEASPGNPPDRQNSKLAKRLKPLK 202
                GE++    S     Y    G +++T     +D E+S  +     +S  +       
Sbjct: 1002 EVSDGEDEESDSSSKCSLYADSDGENDST-----SDSESSSSSSSSSSSSSSSSSSSSSS 1056

Query: 203  VRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYDEVQEK 245
                 SE    ++    LP  + PP  +   TP P    V E+
Sbjct: 1057 SSESSSEDEEEEERPAALPSASPPPREVPVPTPAPVEVPVPER 1099


>gi|239050813 lipoxygenase homology domains 1 isoform 1 [Homo sapiens]
          Length = 2211

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 20/111 (18%)

Query: 85   IRDKRKQRQG---EDLAHVQHPTGAGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTN 141
            ++ K+K+R+G   ED    +  + +   + EE+  EEEEE+EE     + P  +EV+  +
Sbjct: 936  LQRKKKKRKGSDEEDEGEEEESSSSEESSSEEEEMEEEEEEEE-----FGPGMQEVIEQH 990

Query: 142  YSE-----ARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVEASPGNPP 187
              E     ARG+E N  +   +P+        +  P     +V+   GN P
Sbjct: 991  KFEAHRWLARGKEDNELVVELVPA-------GKPGPERNTYEVQVVTGNVP 1034


>gi|51873049 hypothetical protein LOC8603 [Homo sapiens]
          Length = 1224

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%)

Query: 86  RDKRKQRQGEDLAHVQHPTGAGPHA--QEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYS 143
           R + KQR+ E+ A ++    A  H   QEE  + EEEEDEE     +   ++ +      
Sbjct: 871 RARHKQRKLEEKARLEAEARAREHLHLQEEQRRREEEEDEEEEEDRFKEEFQRLQELQKL 930

Query: 144 EARGEEQNPRLSISLPSYESLT 165
            A  +++  R S   P  + LT
Sbjct: 931 RAVKKKKKERPSKDCPKLDMLT 952


>gi|116875765 tight junction protein 1 isoform b [Homo sapiens]
          Length = 1668

 Score = 36.6 bits (83), Expect = 0.022
 Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 21/158 (13%)

Query: 109  HAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLD 168
            H+Q+ DS++  EE  E   R Y P +EE    +Y      EQ PR S      +   G D
Sbjct: 1030 HSQDLDSRQHPEESSE---RGYFPRFEEPAPLSYDSRPRYEQAPRASALRHEEQPAPGYD 1086

Query: 169  ETTPTSTRADVEASPGNPPD------RQNSKLAKRLKP--LKVRRIKSEKLH-------L 213
                    A    S G  P        Q S+  +++ P     R    E LH       L
Sbjct: 1087 THGRLRPEAQPHPSAGPKPAESKQYFEQYSRSYEQVPPQGFTSRAGHFEPLHGAAAVPPL 1146

Query: 214  KDFRINLPDKNVPPPSIEPLTPPPQYDEVQEKAPDTRP 251
                 + P+    P + +PL PPP   E +E+ P  +P
Sbjct: 1147 IPSSQHKPE--ALPSNTKPLPPPPTQTE-EEEDPAMKP 1181


>gi|116875767 tight junction protein 1 isoform a [Homo sapiens]
          Length = 1748

 Score = 36.6 bits (83), Expect = 0.022
 Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 21/158 (13%)

Query: 109  HAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLD 168
            H+Q+ DS++  EE  E   R Y P +EE    +Y      EQ PR S      +   G D
Sbjct: 1110 HSQDLDSRQHPEESSE---RGYFPRFEEPAPLSYDSRPRYEQAPRASALRHEEQPAPGYD 1166

Query: 169  ETTPTSTRADVEASPGNPPD------RQNSKLAKRLKP--LKVRRIKSEKLH-------L 213
                    A    S G  P        Q S+  +++ P     R    E LH       L
Sbjct: 1167 THGRLRPEAQPHPSAGPKPAESKQYFEQYSRSYEQVPPQGFTSRAGHFEPLHGAAAVPPL 1226

Query: 214  KDFRINLPDKNVPPPSIEPLTPPPQYDEVQEKAPDTRP 251
                 + P+    P + +PL PPP   E +E+ P  +P
Sbjct: 1227 IPSSQHKPE--ALPSNTKPLPPPPTQTE-EEEDPAMKP 1261


>gi|4557543 extracellular matrix protein 2 precursor [Homo sapiens]
          Length = 699

 Score = 35.4 bits (80), Expect = 0.048
 Identities = 20/38 (52%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 89  RKQRQGED--LAHVQHPTGAGPHAQEEDSQEEEEEDEE 124
           RKQR GE+  LAH Q   G      EE+  EE EEDEE
Sbjct: 250 RKQRPGEERRLAHQQQRQGREEEEDEEEEGEEGEEDEE 287


>gi|7657465 podocalyxin-like 2 [Homo sapiens]
          Length = 605

 Score = 35.0 bits (79), Expect = 0.063
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 10/92 (10%)

Query: 100 VQHPTGAGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRL-SISL 158
           V+ P    P  +EE+ +EEEE ++E   +      EE++  N S+   EE  P++   SL
Sbjct: 152 VEPPWHMPPREEEEEEEEEEEREKEEVEKQEEEEEEELLPVNGSQ---EEAKPQVRDFSL 208

Query: 159 PSYESLTGL------DETTPTSTRADVEASPG 184
            S     G       D     S+  +VE+S G
Sbjct: 209 TSSSQTPGATKSRHEDSGDQASSGVEVESSMG 240


>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
          Length = 841

 Score = 35.0 bits (79), Expect = 0.063
 Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 1/156 (0%)

Query: 87  DKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEAR 146
           + R +R+ E     +        A++E+ +  +++ EEA +R    +  + +       +
Sbjct: 641 EARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQQ 700

Query: 147 GEEQNPRLSISLPSYESLTGLDETTPTSTRADVEASPGNPPDRQNSKLAKRLKP-LKVRR 205
            E++       L      T   E + T  + D + +  N    +  K  +   P L+   
Sbjct: 701 QEQERQERRKRLEEIMKRTRKSEVSETKQKQDSKEANANGSSPEPVKAVEARSPGLQKEA 760

Query: 206 IKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYDE 241
           ++ E+   ++ + +LP K +P   +  L P P + E
Sbjct: 761 VQKEEPIPQEPQWSLPSKELPASLVNGLQPLPAHQE 796



 Score = 28.5 bits (62), Expect = 5.9
 Identities = 36/190 (18%), Positives = 69/190 (36%), Gaps = 25/190 (13%)

Query: 87  DKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMN------T 140
           ++RK   G   A V+    A P  ++E   +E E ++E ++     S ++  +       
Sbjct: 390 ERRKPNAGGSPAPVRRRPEASPVQKKEKKDKERENEKEKSALARERSLKKRQSLPASPRA 449

Query: 141 NYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVEASPGNPPDRQNSKLAKRLKP 200
             S +   E +P+ S + PS  S +     +P  +       P  PP  + +  + + + 
Sbjct: 450 RLSASTASELSPK-SKARPSSPSTSWHRPASPCPSPGPGHTLPPKPPSPRGTTASPKGRV 508

Query: 201 LKVRRIK-------------SEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYDEVQEKAP 247
            +    K             S++    +     P    P P+  P   PPQ ++   + P
Sbjct: 509 RRKEEAKESPSAAGPEDKSQSKRRASNEKESAAPASPAPSPAPSPTPAPPQKEQPPAETP 568

Query: 248 D-----TRPP 252
                 T PP
Sbjct: 569 TDAAVLTSPP 578


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 34.7 bits (78), Expect = 0.082
 Identities = 39/154 (25%), Positives = 60/154 (38%), Gaps = 15/154 (9%)

Query: 106  AGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLT 165
            A P   E    E   E+E + S       EE    + S  R EE+       +  YE + 
Sbjct: 9477 AVPQRVEVTRHEVSAEEEWSYS-------EEEEGVSISVYREEEREEEEEAEVTEYEVME 9529

Query: 166  GLDETTPTST----RADVEASPGNPPDRQNSKLAKRLK-PLKVRRIKSEKLHLKDFRINL 220
              +E             VEA P    +RQ  K+  + K P K+      K+     +I +
Sbjct: 9530 EPEEYVVEEKLHIISKRVEAEPAEVTERQEKKIVLKPKIPAKIEEPPPAKVPEAPKKI-V 9588

Query: 221  PDKNVPPP--SIEPLTPPPQYDEVQEKAPDTRPP 252
            P+K VP P    E + PP   +E ++  P+ + P
Sbjct: 9589 PEKKVPAPVPKKEKVPPPKVPEEPKKPVPEKKVP 9622



 Score = 32.0 bits (71), Expect = 0.53
 Identities = 40/167 (23%), Positives = 63/167 (37%), Gaps = 38/167 (22%)

Query: 111   QEEDSQEEEE---EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGL 167
             +EE   EEEE   E+EE      +P  EEV+         EE+ P     +P  E     
Sbjct: 10116 EEEVLPEEEEVLPEEEEV-----LPEEEEVLPEEEEIPPEEEEVPPEEEYVPEEEEFVPE 10170

Query: 168   DETTPTSTRADVEASPGNPPDRQNSKLAKRLKPLKV-----------------RRIKSEK 210
             +E  P       E  P  P      ++ K++   KV                 ++++ ++
Sbjct: 10171 EEVLP-------EVKPKVPVPAPVPEIKKKVTEKKVVIPKKEEAPPAKVPEVPKKVEEKR 10223

Query: 211   LHLKDFRINLPDKNVPPPSIEPLT------PPPQYDEVQEKAPDTRP 251
             + L      LP +    P  EP++       PP  +EV+E AP   P
Sbjct: 10224 IILPKEEEVLPVEVTEEPEEEPISEEEIPEEPPSIEEVEEVAPPRVP 10270



 Score = 29.6 bits (65), Expect = 2.6
 Identities = 33/140 (23%), Positives = 46/140 (32%), Gaps = 21/140 (15%)

Query: 108   PHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGL 167
             P   E +    EEE       Y V   EE ++        EE  P + + +P        
Sbjct: 9900  PKELEPEEVAFEEEVVTHVEEYLVEEEEEYIHEEEEFITEEEVVPVIPVKVPEVPRKPVP 9959

Query: 168   DETTPTSTRADVEASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPP 227
             +E  P       EA P   P+              V +   EK+      + +P K  PP
Sbjct: 9960  EEKKPVPVPKKKEAPPAKVPE--------------VPKKPEEKVP-----VLIPKKEKPP 10000

Query: 228   PSIEPLTPPPQYDEVQEKAP 247
             P+  P  P     E  EK P
Sbjct: 10001 PAKVPEVPKKPVPE--EKVP 10018



 Score = 28.9 bits (63), Expect = 4.5
 Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 25/134 (18%)

Query: 112   EEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETT 171
             EE+   EEE  EE       PS EEV          E   PR+       E +       
Sbjct: 10242 EEEPISEEEIPEEP------PSIEEVE---------EVAPPRVP------EVIKKAVPEA 10280

Query: 172   PTSTRADVEASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIE 231
             PT     VEA    PP + + K+ +   P+ V++ ++    + +    +P+K V  P  E
Sbjct: 10281 PTPVPKKVEA----PPAKVSKKIPEEKVPVPVQKKEAPPAKVPEVPKKVPEKKVLVPKKE 10336

Query: 232   PLTPPPQYDEVQEK 245
              + P      ++EK
Sbjct: 10337 AVPPAKGRTVLEEK 10350



 Score = 28.9 bits (63), Expect = 4.5
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)

Query: 220   LPDKNVP-PPSIEPLTPPPQYDEV-QEKAPDTRPP 252
             +P+K VP PP+ +P  PPP+  E  +E  P+ + P
Sbjct: 10505 VPEKKVPVPPAKKPEAPPPKVPEAPKEVVPEKKVP 10539



 Score = 28.1 bits (61), Expect = 7.7
 Identities = 29/131 (22%), Positives = 53/131 (40%), Gaps = 13/131 (9%)

Query: 131   VPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETT-PTSTRADVEASPGNPPDR 189
             +P  EE       E   + +  R  I LP  E +  ++ T  P       E  P  PP  
Sbjct: 10201 IPKKEEAPPAKVPEVPKKVEEKR--IILPKEEEVLPVEVTEEPEEEPISEEEIPEEPPSI 10258

Query: 190   QN-SKLAKRLKPLKVRRIKSE-------KLHLKDFRIN--LPDKNVPPPSIEPLTPPPQY 239
             +   ++A    P  +++   E       K+     +++  +P++ VP P  +   PP + 
Sbjct: 10259 EEVEEVAPPRVPEVIKKAVPEAPTPVPKKVEAPPAKVSKKIPEEKVPVPVQKKEAPPAKV 10318

Query: 240   DEVQEKAPDTR 250
              EV +K P+ +
Sbjct: 10319 PEVPKKVPEKK 10329


>gi|110349786 Alstrom syndrome 1 [Homo sapiens]
          Length = 4169

 Score = 34.7 bits (78), Expect = 0.082
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)

Query: 111 QEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDET 170
           +EE+ +EEEEE+EEAA+       + V+     E  G E +   S S    + L  +D+ 
Sbjct: 16  EEEEEEEEEEEEEEAAAAAAANVDDVVVVEEVEEEAGRELD---SDSHYGPQHLESIDDE 72

Query: 171 TPTSTRADVEASPG------NPPDRQNSK 193
                +A ++A PG      +PP  + S+
Sbjct: 73  EDEEAKAWLQAHPGRILPPLSPPQHRYSE 101


>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
          Length = 4374

 Score = 34.7 bits (78), Expect = 0.082
 Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 10/99 (10%)

Query: 99   HVQHPTGAGPHAQEEDSQEEEEEDEEAASRYYVPSY----EEVMNTNYSEARGEEQNPRL 154
            H Q    +G +  E+DSQ+EEEE+EE              +E  + + SE   +E  P +
Sbjct: 2415 HTQEEDSSGSNEDEDDSQDEEEEEEEDEEDDQEDDEGEEGDEDDDDDGSEMELDEDYPDM 2474

Query: 155  SIS-LPSYESLTGLDE-----TTPTSTRADVEASPGNPP 187
            + S L  +E     D+         S+  D+  SPGN P
Sbjct: 2475 NASPLVRFERFDREDDLIIEFDNMFSSATDIPPSPGNIP 2513



 Score = 30.8 bits (68), Expect = 1.2
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 4/83 (4%)

Query: 74  VMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGP----HAQEEDSQEEEEEDEEAASRY 129
           ++ LL  IC   RD +   Q   +        A P    HA EE S E+EEE+E  A + 
Sbjct: 681 IIKLLEEICNLGRDPKYICQKPSIQKADGTATAPPPRSNHAAEEASSEDEEEEEVQAMQS 740

Query: 130 YVPSYEEVMNTNYSEARGEEQNP 152
           +  + +     N      EE+ P
Sbjct: 741 FNSTQQNETEPNQQVVGTEERIP 763


>gi|32698902 transmembrane protein 61 [Homo sapiens]
          Length = 210

 Score = 34.7 bits (78), Expect = 0.082
 Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 63/219 (28%)

Query: 1   MMAQSKANGSH------YALTAIGLGMLVLGVIMAMW------NLVPGFSA--AEKPTAQ 46
           M      +GSH      Y +T  G  +LV G +   W         PG  A   E P  +
Sbjct: 1   MALPQMCDGSHLASTLRYCMTVSGTVVLVAGTLCFAWWSEGDATAQPGQLAPPTEYPVPE 60

Query: 47  GSNKTEVGGGILKSKTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGA 106
           G +       +L+S    V++V  GAG +LLL+ +  S++           A +  P   
Sbjct: 61  GPSP------LLRS----VSFVCCGAGGLLLLIGLLWSVK-----------ASIPGPPRW 99

Query: 107 GPHAQEED-----SQEEEEEDEEAASRYYVPSYEEVMNTNYSE----------------- 144
            P+    D      +  E+E         +P+YEE ++   +E                 
Sbjct: 100 DPYHLSRDLYYLTVESSEKESCRTPKVVDIPTYEEAVSFPVAEGPPTPPAYPTEEALEPS 159

Query: 145 -ARGEEQNPRLSISLPSYESLT-GLD----ETTPTSTRA 177
            +R    + + +   PSYES++  LD    ETTP++TR+
Sbjct: 160 GSRDALLSTQPAWPPPSYESISLALDAVSAETTPSATRS 198


>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
          Length = 1312

 Score = 34.3 bits (77), Expect = 0.11
 Identities = 31/148 (20%), Positives = 60/148 (40%), Gaps = 13/148 (8%)

Query: 103 PTGAGPHAQ------EEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSI 156
           PTG+ P +       EE+ +EEEEE+EE           + ++       G   +  LS 
Sbjct: 253 PTGSNPSSSAGTPSPEEEEEEEEEEEEEEEDEEEEEGLSQSISRISETLAGIYDDNSLSQ 312

Query: 157 SLPSYESLTGLDETTPTSTRADVEASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDF 216
             P  ES        P +       +PG PP   +++    ++  +V  + +E    ++ 
Sbjct: 313 DFPGDES------PRPDAQPTQPTPAPGTPPQVDSTRADGAMR-RRVFVVGTEAEACREG 365

Query: 217 RINLPDKNVPPPSIEPLTPPPQYDEVQE 244
           ++++        ++ P   PP   E++E
Sbjct: 366 KVSVEVVTAGGAALPPPLLPPGDSEIEE 393


>gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [Homo
           sapiens]
          Length = 747

 Score = 34.3 bits (77), Expect = 0.11
 Identities = 14/22 (63%), Positives = 17/22 (77%)

Query: 104 TGAGPHAQEEDSQEEEEEDEEA 125
           +G GP   EE+ +EEEEEDEEA
Sbjct: 67  SGGGPGGDEEEDEEEEEEDEEA 88


>gi|66472382 nischarin [Homo sapiens]
          Length = 1504

 Score = 33.9 bits (76), Expect = 0.14
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 4/53 (7%)

Query: 101 QHPTGAGPHAQEEDSQEEEEEDEEAASRYY---VPSYEEVMNTNYSEARGEEQ 150
           Q   G G   +EED +EEEEED  A +RY+    P  EE       E   EE+
Sbjct: 627 QREEGQGEQGEEEDEEEEEEED-VAENRYFEMGPPDVEEEEGGGQGEEEEEEE 678


>gi|31377846 WD repeat domain 52 [Homo sapiens]
          Length = 982

 Score = 33.9 bits (76), Expect = 0.14
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 5/79 (6%)

Query: 85  IRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSE 144
           +++K ++ +   LA      G     +EE+ +EEEEE+EE     ++PS    +   +  
Sbjct: 698 LKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEEPLPEIFIPSTPSPILCGFYS 757

Query: 145 ARGEEQNPRLSISLPSYES 163
             G     +  +SL  Y+S
Sbjct: 758 EPG-----KFWVSLGGYDS 771


>gi|169636420 carbonic anhydrase IX precursor [Homo sapiens]
          Length = 459

 Score = 33.5 bits (75), Expect = 0.18
 Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 16/119 (13%)

Query: 75  MLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEEEDEEAASRYYVPSY 134
           +LL L + + +  +R  R  ED      P G G   +++   EE+   EE + R   P  
Sbjct: 25  LLLSLLLLVPVHPQRLPRMQED-----SPLGGGSSGEDDPLGEEDLPSEEDSPREEDPPG 79

Query: 135 EEVMNTNYSEARGEEQNPRLSISLPSYESLTGLD-ETTPTSTRADVEASPGNPPDRQNS 192
           EE +     +  GEE  P +    P  E    L  E  PT     VEA PG+P + QN+
Sbjct: 80  EEDL-PGEEDLPGEEDLPEVK---PKSEEEGSLKLEDLPT-----VEA-PGDPQEPQNN 128


>gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homolog
           [Homo sapiens]
          Length = 666

 Score = 33.5 bits (75), Expect = 0.18
 Identities = 41/166 (24%), Positives = 66/166 (39%), Gaps = 11/166 (6%)

Query: 87  DKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEE---EEEDEEAASRYYVPSYEEVMNTNYS 143
           D  +Q Q  D   +Q+     P A +E+ +     EE+D ++ S     S +EV+     
Sbjct: 230 DDEEQPQLSDEEKMQNSDDERPQASDEEHRHSDDEEEQDHKSESARGSDSEDEVLRMKRK 289

Query: 144 EARGEEQNPRLSISLPSYESLT-----GLDETTPTSTRADVEASPGNPPDRQN-SKLAKR 197
            A   +        +P   S T     G D+ +  S   D   +PG P D     +  + 
Sbjct: 290 NAIASDSEADSDTEVPKDNSGTMDLFGGADDISSGSDGEDKPPTPGQPVDENGLPQDQQE 349

Query: 198 LKPLKVRRIKSEKLHLK-DFRINLPDKNVPP-PSIEPLTPPPQYDE 241
            +P+   RI+ E   +  D   +L    +P   S+EP    PQY E
Sbjct: 350 EEPIPETRIEVEIPKVNTDLGNDLYFVKLPNFLSVEPRPFDPQYYE 395



 Score = 29.3 bits (64), Expect = 3.4
 Identities = 25/93 (26%), Positives = 34/93 (36%), Gaps = 5/93 (5%)

Query: 89  RKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEEEDEEAAS-----RYYVPSYEEVMNTNYS 143
           R++ Q   +   QH  G      E D  +EEEE EE+ S       Y     E     YS
Sbjct: 548 RRESQQRRMREKQHQRGLSASYLEPDRYDEEEEGEESISLAAIKNRYKGGIREERARIYS 607

Query: 144 EARGEEQNPRLSISLPSYESLTGLDETTPTSTR 176
               E      +  L   + LT  +E  P+  R
Sbjct: 608 SDSDEGSEEDKAQRLLKAKKLTSDEEGEPSGKR 640


>gi|167234422 hematopoietic cell-specific Lyn substrate 1 [Homo
           sapiens]
          Length = 486

 Score = 33.5 bits (75), Expect = 0.18
 Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 33/151 (21%)

Query: 110 AQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDE 169
           A+E+  +EEEE+ ++ A R      E    T  S    E   P +++  P+  +      
Sbjct: 246 AEEKRKREEEEKAQQVARR----QQERKAVTKRSP---EAPQPVIAMEEPAVPA------ 292

Query: 170 TTPTSTRADVEASP--GNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPP 227
             P   +   EA P  G PP  ++           VR  +   + L   R  LP+ N  P
Sbjct: 293 --PLPKKISSEAWPPVGTPPSSESEP---------VRTSREHPVPLLPIRQTLPEDNEEP 341

Query: 228 PSIEPLT-------PPPQYDEVQEKAPDTRP 251
           P++ P T         P Y+   E  P+  P
Sbjct: 342 PALPPRTLEGLQVEEEPVYEAEPEPEPEPEP 372


>gi|56118221 amyloid beta (A4) precursor protein-binding, family B,
           member 1 interacting protein [Homo sapiens]
          Length = 666

 Score = 33.1 bits (74), Expect = 0.24
 Identities = 29/88 (32%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 168 DETTPTSTRADVEASPGNPPDRQNSKLA-KRLKPLKVRRIKSEKLHLK--DFRINLPDKN 224
           D   P +  A   + P  PP R++S  +     PLK +      L     DF   LP   
Sbjct: 502 DPAVPRAPHAPKSSLPPPPPVRRSSDTSGSPATPLKAKGTGGGGLPAPPDDF---LPPPP 558

Query: 225 VPPPSIEPLTPPPQYDEVQEKAPDTRPP 252
            PPP  +P  PPP  D   E  PD  PP
Sbjct: 559 PPPPLDDPELPPPPPD-FMEPPPDFVPP 585


>gi|51873055 fibulin 2 isoform b precursor [Homo sapiens]
          Length = 1184

 Score = 33.1 bits (74), Expect = 0.24
 Identities = 26/81 (32%), Positives = 33/81 (40%), Gaps = 9/81 (11%)

Query: 103 PTGAGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYE 162
           P  A      EDS+EEEEE+EE          EE+  T    A G      L  + P+  
Sbjct: 265 PVQAKARRVTEDSEEEEEEEEER---------EEMAVTEQLAAGGHRGLDGLPTTAPAGP 315

Query: 163 SLTGLDETTPTSTRADVEASP 183
           SL   +E      RA+  A P
Sbjct: 316 SLPIQEERAEAGARAEAGARP 336


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.129    0.365 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,835,755
Number of Sequences: 37866
Number of extensions: 618127
Number of successful extensions: 8226
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 188
Number of HSP's that attempted gapping in prelim test: 6527
Number of HSP's gapped (non-prelim): 1136
length of query: 253
length of database: 18,247,518
effective HSP length: 100
effective length of query: 153
effective length of database: 14,460,918
effective search space: 2212520454
effective search space used: 2212520454
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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