PODXL2 35745

Name: PODXL2	Sequence: fasta or formatted (605aa)		NCBI GI: 7657465
Description: podocalyxin-like 2		Referenced in: Additional Host Defense Functions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 42 2 C cysteine 1.2 7 1 D aspartate 5.0 30 1 E glutamate 12.9 78 11 F phenylalanine 1.8 11 1 G glycine 8.9 54 3 H histidine 2.5 15 2 I isoleucine 2.8 17 4 K lysine 2.3 14 1 L leucine 12.1 73 5 M methionine 1.8 11 1 N asparagine 2.6 16 1 P proline 8.3 50 2 Q glutamine 5.1 31 2 R arginine 3.5 21 2 S serine 9.9 60 3 T threonine 5.1 31 2 V valine 5.1 31 2 W tryptophan 1.2 7 1 Y tyrosine 1.0 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 podocalyxin-like 2 PODXL 0.038 podocalyxin-like isoform 2 precursor PODXL 0.037 podocalyxin-like isoform 1 precursor MYT1 0.034 myelin transcription factor 1 PELP1 0.032 proline, glutamic acid and leucine rich protein 1 [... EIF5B 0.027 eukaryotic translation initiation factor 5B TTBK1 0.027 tau tubulin kinase 1 SRCAP 0.025 Snf2-related CBP activator protein PLEKHG5 0.025 pleckstrin homology domain containing family G membe... PLEKHG5 0.025 pleckstrin homology domain containing family G memb... PLEKHG5 0.025 pleckstrin homology domain containing family G memb... PLEKHG5 0.025 pleckstrin homology domain containing family G memb... PLEKHG5 0.025 pleckstrin homology domain containing family G memb... RP1L1 0.025 retinitis pigmentosa 1-like 1 SHROOM4 0.025 shroom family member 4 BCAN 0.024 brevican isoform 2 BCAN 0.024 brevican isoform 1 PRKCSH 0.023 protein kinase C substrate 80K-H isoform 1 NES 0.023 nestin PRKCSH 0.023 protein kinase C substrate 80K-H isoform 2 ZFHX3 0.020 AT-binding transcription factor 1 BAZ1A 0.020 bromodomain adjacent to zinc finger domain, 1A isofo... BAZ1A 0.020 bromodomain adjacent to zinc finger domain, 1A isofo... MAP7D1 0.020 MAP7 domain containing 1 EHMT2 0.020 euchromatic histone-lysine N-methyltransferase 2 is... NEFH 0.020 neurofilament, heavy polypeptide 200kDa C3orf44 0.020 hypothetical protein LOC131831 SLC24A1 0.020 solute carrier family 24 (sodium/potassium/calcium ex... CCDC9 0.020 coiled-coil domain containing 9 SETD1B 0.019 SET domain containing 1B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.