Guide to the Human Genome
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Name: TMEM61 Sequence: fasta or formatted (210aa) NCBI GI: 32698902
Description:

transmembrane protein 61

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         20           1
 C cysteine            3.3          7           2
 D aspartate           3.3          7           1
 E glutamate           6.7         14           2
 F phenylalanine       1.4          3           1
 G glycine             7.6         16           2
 H histidine           1.0          2           1
 I isoleucine          1.9          4           1
 K lysine              1.4          3           1
 L leucine            11.0         23           4
 M methionine          1.4          3           1
 N asparagine          0.0          0           0
 P proline            12.4         26           3
 Q glutamine           2.4          5           1
 R arginine            3.8          8           1
 S serine             11.9         25           2
 T threonine           7.6         16           2
 V valine              7.1         15           2
 W tryptophan          2.4          5           2
 Y tyrosine            3.8          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 61 
STARD9                0.032   PREDICTED: StAR-related lipid transfer (START) doma...
STARD9                0.032   PREDICTED: StAR-related lipid transfer (START) doma...
STARD9                0.032   PREDICTED: StAR-related lipid transfer (START) doma...
WNK2                  0.029   WNK lysine deficient protein kinase 2 
LOC100133305          0.027   PREDICTED: hypothetical protein 
LOC100133305          0.027   PREDICTED: hypothetical protein 
ARHGAP17              0.027   nadrin isoform 1 
ARHGAP17              0.027   nadrin isoform 2 
MAP6                  0.024   microtubule-associated protein 6 isoform 2 
MAP6                  0.024   microtubule-associated protein 6 isoform 1 
TMEM51                0.024   transmembrane protein 51 
TMEM51                0.024   transmembrane protein 51 
TMEM51                0.024   transmembrane protein 51 
TMEM51                0.024   transmembrane protein 51 
FLJ22184              0.022   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.022   PREDICTED: hypothetical protein LOC80164 
DIDO1                 0.022   death inducer-obliterator 1 isoform c 
FMN2                  0.019   formin 2 
LOC284889             0.019   PREDICTED: hypothetical protein 
LOC284889             0.019   PREDICTED: hypothetical protein 
LOC284889             0.019   PREDICTED: hypothetical protein 
PRRG2                 0.019   proline rich Gla (G-carboxyglutamic acid) 2 
LAPTM5                0.019   lysosomal multispanning membrane protein 5 
LOC389333             0.019   hypothetical protein LOC389333 
WASF1                 0.019   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.019   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.019   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.019   Wiskott-Aldrich syndrome protein family member 1 [Hom...
NACA                  0.019   nascent polypeptide-associated complex alpha subuni...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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