Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: TMEM51 Sequence: fasta or formatted (253aa) NCBI GI: 209977056
Description:

transmembrane protein 51

Not currently referenced in the text

Other entries for this name:
alt mRNA {253aa} transmembrane protein 51
alt mRNA {253aa} transmembrane protein 51
alt mRNA {253aa} transmembrane protein 51
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         20           2
 C cysteine            0.4          1           1
 D aspartate           4.7         12           1
 E glutamate           9.5         24           5
 F phenylalanine       1.2          3           1
 G glycine             6.7         17           3
 H histidine           2.0          5           1
 I isoleucine          3.6          9           1
 K lysine              6.3         16           1
 L leucine             9.5         24           4
 M methionine          2.8          7           2
 N asparagine          4.0         10           1
 P proline             9.1         23           3
 Q glutamine           4.3         11           1
 R arginine            5.1         13           2
 S serine              8.3         21           1
 T threonine           5.1         13           2
 V valine              5.9         15           1
 W tryptophan          0.4          1           1
 Y tyrosine            3.2          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 51 
TMEM51                1.000   transmembrane protein 51 
TMEM51                1.000   transmembrane protein 51 
TMEM51                1.000   transmembrane protein 51 
CMYA5                 0.041   cardiomyopathy associated 5 
FKBP15                0.035   FK506 binding protein 15, 133kDa 
MYPOP                 0.033   Myb protein P42POP 
XIRP2                 0.029   xin actin-binding repeat containing 2 isoform 1 [Ho...
AP3B2                 0.025   adaptor-related protein complex 3, beta 2 subunit [H...
SETD1A                0.025   SET domain containing 1A 
LOXHD1                0.025   lipoxygenase homology domains 1 isoform 1 
C4orf8                0.025   hypothetical protein LOC8603 
TJP1                  0.025   tight junction protein 1 isoform b 
TJP1                  0.025   tight junction protein 1 isoform a 
ECM2                  0.021   extracellular matrix protein 2 precursor 
PODXL2                0.021   podocalyxin-like 2 
MAP7D1                0.021   MAP7 domain containing 1 
TTN                   0.021   titin isoform N2-A 
ALMS1                 0.021   Alstrom syndrome 1 
HUWE1                 0.021   HECT, UBA and WWE domain containing 1 
TMEM61                0.021   transmembrane protein 61 
SCAF1                 0.019   SR-related CTD-associated factor 1 
HNRNPUL2              0.019   heterogeneous nuclear ribonucleoprotein U-like 2 [H...
NISCH                 0.019   nischarin 
WDR52                 0.019   WD repeat domain 52 
CA9                   0.017   carbonic anhydrase IX precursor 
LEO1                  0.017   Leo1, Paf1/RNA polymerase II complex component, homo...
HCLS1                 0.017   hematopoietic cell-specific Lyn substrate 1 
APBB1IP               0.017   amyloid beta (A4) precursor protein-binding, family ...
FBLN2                 0.017   fibulin 2 isoform b precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press