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Search of human proteins with 89037235
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|89037235 PREDICTED: hypothetical protein [Homo sapiens]
(130 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|89037235 PREDICTED: hypothetical protein [Homo sapiens] 279 4e-76
gi|239747182 PREDICTED: hypothetical protein XP_002343934 [Homo ... 277 1e-75
gi|89058402 PREDICTED: hypothetical protein [Homo sapiens] 277 1e-75
gi|169215684 PREDICTED: hypothetical protein [Homo sapiens] 260 2e-70
gi|47524184 hypothetical protein LOC29798 [Homo sapiens] 252 5e-68
gi|47551356 hypothetical protein LOC408029 [Homo sapiens] 234 2e-62
gi|23957680 ral guanine nucleotide dissociation stimulator-like ... 60 6e-10
gi|56090618 CMT1A duplicated region transcript 15 [Homo sapiens] 45 2e-05
gi|24307909 ral guanine nucleotide dissociation stimulator isofo... 41 2e-04
gi|108796058 ral guanine nucleotide dissociation stimulator isof... 41 2e-04
gi|134304853 PTPL1-associated RhoGAP 1 [Homo sapiens] 37 0.003
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens] 35 0.013
gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo ... 35 0.017
gi|92091600 ArfGAP with RhoGAP domain, ankyrin repeat and PH dom... 35 0.017
gi|239757690 PREDICTED: hypothetical protein [Homo sapiens] 35 0.022
gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 35 0.022
gi|163965366 nascent polypeptide-associated complex alpha subuni... 34 0.037
gi|110832843 TBP-associated factor 4 [Homo sapiens] 33 0.064
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 33 0.064
gi|31377585 spermatogenesis associated 2-like [Homo sapiens] 33 0.064
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens] 33 0.083
gi|52426748 cholinergic receptor, muscarinic 4 [Homo sapiens] 32 0.11
gi|66932943 variable charge, X chromosome [Homo sapiens] 32 0.11
gi|49619239 variable charge, X-linked 2 [Homo sapiens] 32 0.11
gi|48762947 variable charge, X-linked 3A [Homo sapiens] 32 0.14
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 32 0.14
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 32 0.14
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 32 0.14
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 32 0.14
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 32 0.14
>gi|89037235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 130
Score = 279 bits (714), Expect = 4e-76
Identities = 130/130 (100%), Positives = 130/130 (100%)
Query: 1 MTVKWKQLSAAASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQ 60
MTVKWKQLSAAASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQ
Sbjct: 1 MTVKWKQLSAAASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQ 60
Query: 61 PSEELPDFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRP 120
PSEELPDFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRP
Sbjct: 61 PSEELPDFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRP 120
Query: 121 GCATWAPLPH 130
GCATWAPLPH
Sbjct: 121 GCATWAPLPH 130
>gi|239747182 PREDICTED: hypothetical protein XP_002343934 [Homo
sapiens]
Length = 130
Score = 277 bits (709), Expect = 1e-75
Identities = 129/130 (99%), Positives = 129/130 (99%)
Query: 1 MTVKWKQLSAAASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQ 60
MTVKWKQLSA ASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQ
Sbjct: 1 MTVKWKQLSAPASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQ 60
Query: 61 PSEELPDFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRP 120
PSEELPDFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRP
Sbjct: 61 PSEELPDFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRP 120
Query: 121 GCATWAPLPH 130
GCATWAPLPH
Sbjct: 121 GCATWAPLPH 130
>gi|89058402 PREDICTED: hypothetical protein [Homo sapiens]
Length = 130
Score = 277 bits (709), Expect = 1e-75
Identities = 129/130 (99%), Positives = 129/130 (99%)
Query: 1 MTVKWKQLSAAASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQ 60
MTVKWKQLSA ASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQ
Sbjct: 1 MTVKWKQLSAPASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQ 60
Query: 61 PSEELPDFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRP 120
PSEELPDFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRP
Sbjct: 61 PSEELPDFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRP 120
Query: 121 GCATWAPLPH 130
GCATWAPLPH
Sbjct: 121 GCATWAPLPH 130
>gi|169215684 PREDICTED: hypothetical protein [Homo sapiens]
Length = 283
Score = 260 bits (664), Expect = 2e-70
Identities = 121/124 (97%), Positives = 121/124 (97%)
Query: 7 QLSAAASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELP 66
Q A ASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELP
Sbjct: 74 QAHAPASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELP 133
Query: 67 DFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRPGCATWA 126
DFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRPGCATWA
Sbjct: 134 DFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRPGCATWA 193
Query: 127 PLPH 130
PLPH
Sbjct: 194 PLPH 197
>gi|47524184 hypothetical protein LOC29798 [Homo sapiens]
Length = 203
Score = 252 bits (644), Expect = 5e-68
Identities = 120/130 (92%), Positives = 121/130 (93%)
Query: 1 MTVKWKQLSAAASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQ 60
MTVKWKQLSA ASGAEIQ FPVPAVEPVPAPGADSPPGTALELEEAPEPS CPGTAQDQ
Sbjct: 1 MTVKWKQLSAPASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQDQ 60
Query: 61 PSEELPDFMAPPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRP 120
PSEELPDFMAPPVEP ASALELKVWLELEV ERG QHSSSQ+LPHCSQSWAQWKLWRQRP
Sbjct: 61 PSEELPDFMAPPVEPPASALELKVWLELEVAERGGQHSSSQQLPHCSQSWAQWKLWRQRP 120
Query: 121 GCATWAPLPH 130
G A WAPLPH
Sbjct: 121 GFAIWAPLPH 130
>gi|47551356 hypothetical protein LOC408029 [Homo sapiens]
Length = 209
Score = 234 bits (596), Expect = 2e-62
Identities = 111/121 (91%), Positives = 112/121 (92%)
Query: 10 AAASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFM 69
A ASGAEIQ FPVPAVEPVPAPGADSPPGTALELEEAPEPS CPGTAQDQPSEELPDFM
Sbjct: 16 APASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQDQPSEELPDFM 75
Query: 70 APPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRPGCATWAPLP 129
APPVEP ASALELKVWLELEV ERG QHSSSQ+LPHCSQSWAQWKLWRQRPG A WAPLP
Sbjct: 76 APPVEPPASALELKVWLELEVAERGGQHSSSQQLPHCSQSWAQWKLWRQRPGFAIWAPLP 135
Query: 130 H 130
H
Sbjct: 136 H 136
>gi|23957680 ral guanine nucleotide dissociation stimulator-like 4
[Homo sapiens]
Length = 473
Score = 59.7 bits (143), Expect = 6e-10
Identities = 36/74 (48%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 9 SAAASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDF 68
S AA G L P P PAPG PPGT LE + APE S C G+ ++QPSEELPD
Sbjct: 158 SPAALGPPGYLHSAPG--PAPAPGEGPPPGTVLEPQSAPESSCPCRGSVKNQPSEELPDM 215
Query: 69 MAPPVEPRASALEL 82
P PR A +L
Sbjct: 216 TTFP--PRLLAEQL 227
>gi|56090618 CMT1A duplicated region transcript 15 [Homo sapiens]
Length = 188
Score = 44.7 bits (104), Expect = 2e-05
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 10/66 (15%)
Query: 7 QLSAAASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELP 66
Q A AE++ P PA EP PA ++PP ALELE AP A+DQ +EELP
Sbjct: 85 QTLAPGPCAEVRALPAPAAEPEPA-WEEAPPERALELEGAP---------AKDQTNEELP 134
Query: 67 DFMAPP 72
+ P
Sbjct: 135 EITEVP 140
>gi|24307909 ral guanine nucleotide dissociation stimulator isoform
1 [Homo sapiens]
Length = 914
Score = 41.2 bits (95), Expect = 2e-04
Identities = 30/87 (34%), Positives = 39/87 (44%), Gaps = 26/87 (29%)
Query: 12 ASGAEIQLFPVPAVE----PVPAPGADSPPGTALELEEAPE------------------- 48
A G+E+++ P PA E P PA G +S P ALELE APE
Sbjct: 300 APGSELEVAPAPAPELQQAPEPAVGLESAPAPALELEPAPEQDPAPSQTLELEPAPAPVP 359
Query: 49 ---PSFCCPGTAQDQPSEELPDFMAPP 72
PS+ P A++ SEE P + P
Sbjct: 360 SLQPSWPSPVVAENGLSEEKPHLLVFP 386
Score = 32.7 bits (73), Expect = 0.083
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 21 PVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFMAPPVE 74
PVPA P P P PG+ LE+ AP P +P+ L AP +E
Sbjct: 285 PVPAPAPEPEPAPTPAPGSELEVAPAPAPEL----QQAPEPAVGLESAPAPALE 334
Score = 27.3 bits (59), Expect = 3.5
Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 17/79 (21%)
Query: 19 LFPVPAVEPVP-------APGADSP-PGTALELEEAPEPSFCCPGTAQD---QPSEELPD 67
L PVPA++P P A SP P A E E AP P+ PG+ + P+ EL
Sbjct: 261 LSPVPALKPTPELELALTPARAPSPVPAPAPEPEPAPTPA---PGSELEVAPAPAPELQQ 317
Query: 68 FMAPPV---EPRASALELK 83
P V A ALEL+
Sbjct: 318 APEPAVGLESAPAPALELE 336
>gi|108796058 ral guanine nucleotide dissociation stimulator isoform
2 [Homo sapiens]
Length = 859
Score = 41.2 bits (95), Expect = 2e-04
Identities = 30/87 (34%), Positives = 39/87 (44%), Gaps = 26/87 (29%)
Query: 12 ASGAEIQLFPVPAVE----PVPAPGADSPPGTALELEEAPE------------------- 48
A G+E+++ P PA E P PA G +S P ALELE APE
Sbjct: 245 APGSELEVAPAPAPELQQAPEPAVGLESAPAPALELEPAPEQDPAPSQTLELEPAPAPVP 304
Query: 49 ---PSFCCPGTAQDQPSEELPDFMAPP 72
PS+ P A++ SEE P + P
Sbjct: 305 SLQPSWPSPVVAENGLSEEKPHLLVFP 331
Score = 32.7 bits (73), Expect = 0.083
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 21 PVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFMAPPVE 74
PVPA P P P PG+ LE+ AP P +P+ L AP +E
Sbjct: 230 PVPAPAPEPEPAPTPAPGSELEVAPAPAPEL----QQAPEPAVGLESAPAPALE 279
Score = 27.3 bits (59), Expect = 3.5
Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 17/79 (21%)
Query: 19 LFPVPAVEPVP-------APGADSP-PGTALELEEAPEPSFCCPGTAQD---QPSEELPD 67
L PVPA++P P A SP P A E E AP P+ PG+ + P+ EL
Sbjct: 206 LSPVPALKPTPELELALTPARAPSPVPAPAPEPEPAPTPA---PGSELEVAPAPAPELQQ 262
Query: 68 FMAPPV---EPRASALELK 83
P V A ALEL+
Sbjct: 263 APEPAVGLESAPAPALELE 281
>gi|134304853 PTPL1-associated RhoGAP 1 [Homo sapiens]
Length = 1261
Score = 37.4 bits (85), Expect = 0.003
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 26 EPVPAPGADSPPGT-----ALELEEAPEP--SFCCPGTAQDQPSEELPDFMAPPVEPRAS 78
E +P A PPGT L ++ P+P + CPG A QP E+ + P V P
Sbjct: 1181 EKPASPSAAVPPGTDHDPHGLVVKSMPDPDKASACPGQATGQPKEDSEELGLPDVNPMCQ 1240
Query: 79 ALELKVWLELEVVE 92
LK + E +E
Sbjct: 1241 RPRLKRMQQFEDLE 1254
>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
Length = 825
Score = 35.4 bits (80), Expect = 0.013
Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 12/83 (14%)
Query: 7 QLSAAASGAEIQLFPVPA------VEPVPAPGADS----PPGTALELEEAPEPSFCCPGT 56
+ SA + AE+Q P PA V+P PA A + PP E P P+ P
Sbjct: 600 EASAEEAPAEVQ--PPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAE 657
Query: 57 AQDQPSEELPDFMAPPVEPRASA 79
Q P+EE P + PP A A
Sbjct: 658 VQPPPAEEAPAEVQPPPAEEAPA 680
Score = 33.9 bits (76), Expect = 0.037
Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Query: 6 KQLSAAASGAEIQLFPVPAVEPVPAPG-ADSPPGTALELEEAPEPSFCCPGTAQDQPSEE 64
++ +A + A IQL AP PP E P P+ P Q P+EE
Sbjct: 582 EETTAEEASAAIQLLAATEASAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEE 641
Query: 65 LPDFMAPPVEPRASA 79
P + PP A A
Sbjct: 642 APAEVQPPPAEEAPA 656
Score = 32.0 bits (71), Expect = 0.14
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 7 QLSAAASGAEIQLFPVPAVEP--VPAPGADSPPGTALELEEAPEPSFCC---PGTAQDQP 61
+ + A + +++ P PA E V P PP EE+P P +A++ P
Sbjct: 304 EAATAVAENSVKVQPPPAEEAPLVEFPAEIQPPSA----EESPSVELLAEILPPSAEESP 359
Query: 62 SEELPDFMAPPVEPRASALEL 82
SEE P + PP ++ ++EL
Sbjct: 360 SEEPPAEILPPPAEKSPSVEL 380
Score = 28.9 bits (63), Expect = 1.2
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 12/67 (17%)
Query: 10 AAASGAEIQLFPVPA------VEPVPAPGADS----PPGTALELEEAPEPSFCCPGTAQD 59
A + AE+Q P PA V+P PA A + PP E P P+ P Q
Sbjct: 627 AEEAPAEVQ--PPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQS 684
Query: 60 QPSEELP 66
P+EE P
Sbjct: 685 LPAEETP 691
Score = 27.7 bits (60), Expect = 2.7
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 11/91 (12%)
Query: 9 SAAASGAEIQLFPVPAVEPVPAPGADSPPGTALEL---------EEAP--EPSFCCPGTA 57
S +A A I++ P+PA + A P T E EEAP E TA
Sbjct: 386 SPSAQKAPIEVQPLPAEGALEEAPAKVEPPTVEETLADVQPLLPEEAPREEARELQLSTA 445
Query: 58 QDQPSEELPDFMAPPVEPRASALELKVWLEL 88
+ P+EE P P+ +A E ++L
Sbjct: 446 METPAEEAPTEFQSPLPKETTAEEASAEIQL 476
>gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo
sapiens]
Length = 398
Score = 35.0 bits (79), Expect = 0.017
Identities = 33/106 (31%), Positives = 44/106 (41%), Gaps = 16/106 (15%)
Query: 12 ASGAEIQLFPVPAVEPVPAPGA---DSPPGTALELEEAPEPSFCCPGTAQ--DQPSEELP 66
A+ AE QL +V P P A +PPG L P P F P T + PS +LP
Sbjct: 160 AAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLP 219
Query: 67 DFMA-----------PPVEPRASALELKVWLELEVVERGDQHSSSQ 101
+ PPV PR L + L + ERG + S++
Sbjct: 220 PPLPLCRSRWVLAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTR 265
>gi|92091600 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain
1 isoform c [Homo sapiens]
Length = 1450
Score = 35.0 bits (79), Expect = 0.017
Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Query: 21 PVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFMAPPVEPRASAL 80
PVPA P P P G P S C P T PS PD + PP+ +
Sbjct: 93 PVPATPPEPLPTTTEDEGLPAAPPIPPRRS-CLPPTCFTTPSTAAPDPVLPPLPAKRHLA 151
Query: 81 ELKV 84
EL V
Sbjct: 152 ELSV 155
>gi|239757690 PREDICTED: hypothetical protein [Homo sapiens]
Length = 132
Score = 34.7 bits (78), Expect = 0.022
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 63 EELPDFMAPPVEPRASALELKVWLE-LEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRPG 121
E LP P + RA A +L V L LE V+ Q + P CS W +W+ Q PG
Sbjct: 63 ERLPGHSVPLLPVRAQAEDLPVGLSCLEPVQPIPQFTLLVGSPRCSCPWTEWQAILQAPG 122
Query: 122 CAT 124
T
Sbjct: 123 HLT 125
>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
Length = 1271
Score = 34.7 bits (78), Expect = 0.022
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 21 PVPAVEPVPAPGADSPPGTALE--LEEAPEPSFCCPGTAQDQPSEELPDFMAPPVEP 75
P PA EP P P + P A E E APEP+ + +P+ EL +AP + P
Sbjct: 95 PEPATEPAPEPATEPAPEPAPEPATESAPEPTPEPALESVPEPAPELTPEVAPELAP 151
Score = 33.5 bits (75), Expect = 0.049
Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 15/99 (15%)
Query: 21 PVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFMAPPVEP--RAS 78
P PA+E VP P + P A EL APEP+ +P EL P P R S
Sbjct: 127 PEPALESVPEPAPELTPEVAPEL--APEPT--------PEPVTELAPEFCPEAAPEFRPS 176
Query: 79 ALELKVWLELEVVERGDQHS---SSQKLPHCSQSWAQWK 114
+ ++ ERG + S S P SW++ K
Sbjct: 177 PAPCLLQCPVDTRERGLKTSPSPSPSPSPRTPMSWSRIK 215
Score = 30.0 bits (66), Expect = 0.54
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 10/55 (18%)
Query: 21 PVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFMAPPVEP 75
P P + P P P A S T L E PEP A + SE P+ P EP
Sbjct: 57 PCPELAPGPCPEATSESATELYTEPTPEP-------ATEPASEPAPE---PATEP 101
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 33.9 bits (76), Expect = 0.037
Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 17/65 (26%)
Query: 20 FPVP---AVEPVPAPGADSPPGTALELEEAPE-PSFCCPGTAQDQPSEELPDFMAPPVEP 75
FP P A P+ P S GTAL L APE P+F LP+ + PP+ P
Sbjct: 67 FPSPSTIASTPLEVPFPQSSSGTALPLGTAPEAPTF-------------LPNLIGPPISP 113
Query: 76 RASAL 80
A AL
Sbjct: 114 AALAL 118
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 33.1 bits (74), Expect = 0.064
Identities = 26/72 (36%), Positives = 27/72 (37%), Gaps = 3/72 (4%)
Query: 11 AASGAEIQLFPVPAVEPVPAPGADSPPGTALEL--EEAPEPSFCCPGTAQDQPSEEL-PD 67
AA G IQ P PAP A SPP AP P P T P P
Sbjct: 232 AAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPP 291
Query: 68 FMAPPVEPRASA 79
AP V P A+A
Sbjct: 292 TAAPAVPPPAAA 303
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 33.1 bits (74), Expect = 0.064
Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 10 AAASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQP-SEELPDF 68
A A+ A P PA P PAP A + P A A + PG AQ P ++
Sbjct: 118 APAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPL 177
Query: 69 MAPPVEPRA 77
APP P A
Sbjct: 178 AAPPPAPAA 186
>gi|31377585 spermatogenesis associated 2-like [Homo sapiens]
Length = 424
Score = 33.1 bits (74), Expect = 0.064
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 11/77 (14%)
Query: 29 PAPGADSPPGTAL---ELEEAPEPSFCCPGTAQDQPSEELPDFMAPP-------VEPRAS 78
P+PG DSPP L E + G A + P+EELP +PP +EP S
Sbjct: 246 PSPGPDSPPAELAYRPPLWEQSAKLWGTGGRAWEPPAEELPQASSPPYGALEEGLEPEPS 305
Query: 79 ALELKVWLELEVVERGD 95
A + L E+ GD
Sbjct: 306 AFSF-LSLRRELSRPGD 321
>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
Length = 3664
Score = 32.7 bits (73), Expect = 0.083
Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 9/61 (14%)
Query: 23 PAVEPVPAP-----GADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFMAPPVEPRA 77
PA EP PAP D PPG + E A P+ G++ DQP P A P P A
Sbjct: 1685 PASEPAPAPVEQLEQVDLPPGADPDKEAAMMPAGVEEGSSGDQP----PYLDAKPPTPGA 1740
Query: 78 S 78
S
Sbjct: 1741 S 1741
>gi|52426748 cholinergic receptor, muscarinic 4 [Homo sapiens]
Length = 479
Score = 32.3 bits (72), Expect = 0.11
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query: 21 PVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFMAPPVEPRASAL 80
P PA+ P P P AD A + + P T P APP++PRA
Sbjct: 276 PPPALPPPPRPVADKDTSNESSSGSATQNTKERPATELSTTEATTPAMPAPPLQPRALNP 335
Query: 81 ELKVWLELEVVER 93
+ W ++++V +
Sbjct: 336 ASR-WSKIQIVTK 347
>gi|66932943 variable charge, X chromosome [Homo sapiens]
Length = 206
Score = 32.3 bits (72), Expect = 0.11
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Query: 39 TALELEEAPEPSFCCPGTAQDQPSEELPDFMAPPVEP 75
TA E E AP PG + DQPS+ELP PP EP
Sbjct: 63 TAPEAESAP----AAPGPS-DQPSQELPQHELPPEEP 94
>gi|49619239 variable charge, X-linked 2 [Homo sapiens]
Length = 139
Score = 32.3 bits (72), Expect = 0.11
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Query: 39 TALELEEAPEPSFCCPGTAQDQPSEELPDFMAPPVEP 75
TA E E AP PG + DQPS+ELP PP EP
Sbjct: 63 TAPEAESAP----AAPGPS-DQPSQELPQHELPPEEP 94
>gi|48762947 variable charge, X-linked 3A [Homo sapiens]
Length = 186
Score = 32.0 bits (71), Expect = 0.14
Identities = 30/86 (34%), Positives = 36/86 (41%), Gaps = 26/86 (30%)
Query: 28 VPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFMAPPVEP-----------R 76
V AP A+S P AP PS DQPS+ELP PP EP +
Sbjct: 62 VTAPEAESGPA-------APGPS--------DQPSQELPQHELPPEEPVSEGTQHDPLSQ 106
Query: 77 ASALELKVWLELEVVERGDQHSSSQK 102
S LE + E EV E Q S ++
Sbjct: 107 ESELEEPLSQESEVEEPLSQESQVEE 132
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 32.0 bits (71), Expect = 0.14
Identities = 22/76 (28%), Positives = 27/76 (35%), Gaps = 10/76 (13%)
Query: 12 ASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFC----------CPGTAQDQP 61
A G + P P+P+P + +PP L LE P PS P P
Sbjct: 147 APGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSP 206
Query: 62 SEELPDFMAPPVEPRA 77
S P PP P A
Sbjct: 207 SIPTPPDFIPPAPPLA 222
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 32.0 bits (71), Expect = 0.14
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 10/83 (12%)
Query: 7 QLSAAASGAEIQLFPVPAVEPVPAPGADSPPGTAL-ELEEAPEPSFCCPGTAQDQPSEEL 65
Q A + +Q P P + P+ P +PP AL L+ P P P + PS +
Sbjct: 593 QAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQA 652
Query: 66 PDFMA---------PPVEPRASA 79
P+ +A PP P A
Sbjct: 653 PNALAVHLLQAPFSPPPSPPVQA 675
Score = 29.3 bits (64), Expect = 0.92
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 25 VEPVPAPGADSPPGTALE-LEEAPEPSFCCPGTAQDQPSEELPDFMAPPVEPRASA 79
+ P+ P +PP A L+ P P PG A PS LP M+P P A
Sbjct: 778 MSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLP--MSPLATPPPQA 831
Score = 27.7 bits (60), Expect = 2.7
Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 5/71 (7%)
Query: 7 QLSAAASGAEIQLFPVPAVEPVPAPGADSPPG-----TALELEEAPEPSFCCPGTAQDQP 61
Q + + +Q+ P P P +P A PP A L+ P P P + P
Sbjct: 694 QAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATP 753
Query: 62 SEELPDFMAPP 72
+P +A P
Sbjct: 754 PPRVPPLLAAP 764
Score = 26.9 bits (58), Expect = 4.6
Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 7/69 (10%)
Query: 13 SGAEIQLFPVP--AVEPVPAPGADSPP-GTALELE----EAPEPSFCCPGTAQDQPSEEL 65
SG + + P P A P+PA SPP T L L AP P PS+
Sbjct: 310 SGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAP 369
Query: 66 PDFMAPPVE 74
P PP++
Sbjct: 370 PSMTTPPMQ 378
Score = 26.9 bits (58), Expect = 4.6
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 8/58 (13%)
Query: 21 PVPAVEP------VPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFMAPP 72
P+PA P P P A P L+ P P P +Q PS P APP
Sbjct: 326 PLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPP--SQAPPSMTTPPMQAPP 381
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 32.0 bits (71), Expect = 0.14
Identities = 22/76 (28%), Positives = 27/76 (35%), Gaps = 10/76 (13%)
Query: 12 ASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFC----------CPGTAQDQP 61
A G + P P+P+P + +PP L LE P PS P P
Sbjct: 147 APGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSP 206
Query: 62 SEELPDFMAPPVEPRA 77
S P PP P A
Sbjct: 207 SIPTPPDFIPPAPPLA 222
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 32.0 bits (71), Expect = 0.14
Identities = 22/76 (28%), Positives = 27/76 (35%), Gaps = 10/76 (13%)
Query: 12 ASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFC----------CPGTAQDQP 61
A G + P P+P+P + +PP L LE P PS P P
Sbjct: 147 APGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSP 206
Query: 62 SEELPDFMAPPVEPRA 77
S P PP P A
Sbjct: 207 SIPTPPDFIPPAPPLA 222
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 32.0 bits (71), Expect = 0.14
Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 14/58 (24%)
Query: 23 PAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFMAPPVEPRASAL 80
P V PVP P A S P L EE P P P LP P +P+ASAL
Sbjct: 1820 PEVPPVPLPTASSLPRKLLPWEEGPGP-----------PPPPLP---GPLAQPQASAL 1863
Score = 28.9 bits (63), Expect = 1.2
Identities = 22/66 (33%), Positives = 23/66 (34%), Gaps = 11/66 (16%)
Query: 25 VEPVPAPGADSPPGTALELEEAPEP-----------SFCCPGTAQDQPSEELPDFMAPPV 73
V P PAP D G L +E P P S PG P P PPV
Sbjct: 1546 VLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDTPAPATPLPPV 1605
Query: 74 EPRASA 79
P A A
Sbjct: 1606 PPPAVA 1611
Score = 27.7 bits (60), Expect = 2.7
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 9/45 (20%)
Query: 21 PVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEEL 65
P PA P PG D PPGT +EE S + D P E +
Sbjct: 1656 PAPAA---PQPGPDPPPGTDSGIEEVDSRS------SSDHPLETI 1691
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.130 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,319,604
Number of Sequences: 37866
Number of extensions: 419249
Number of successful extensions: 2569
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 163
Number of HSP's that attempted gapping in prelim test: 2163
Number of HSP's gapped (non-prelim): 520
length of query: 130
length of database: 18,247,518
effective HSP length: 90
effective length of query: 40
effective length of database: 14,839,578
effective search space: 593583120
effective search space used: 593583120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.