Guide to the Human Genome
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Name: MAP2 Sequence: fasta or formatted (471aa) NCBI GI: 87578392
Description:

microtubule-associated protein 2 isoform 2

Referenced in:

Tubulins and Microtubules

Other entries for this name:
alt prot [502aa] microtubule-associated protein 2 isoform 4
alt prot [559aa] microtubule-associated protein 2 isoform 5
alt prot [1827aa] microtubule-associated protein 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         45           2
 C cysteine            0.2          1           1
 D aspartate           3.8         18           1
 E glutamate           7.2         34           2
 F phenylalanine       1.3          6           1
 G glycine             8.3         39           3
 H histidine           2.5         12           2
 I isoleucine          4.5         21           2
 K lysine              7.6         36           2
 L leucine             5.9         28           2
 M methionine          0.2          1           1
 N asparagine          3.4         16           1
 P proline             9.3         44           3
 Q glutamine           3.8         18           1
 R arginine            5.7         27           2
 S serine             11.9         56           3
 T threonine           7.4         35           2
 V valine              5.9         28           2
 W tryptophan          0.2          1           1
 Y tyrosine            1.1          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   microtubule-associated protein 2 isoform 2 
MAP2                  0.981   microtubule-associated protein 2 isoform 4 
MAP2                  0.944   microtubule-associated protein 2 isoform 5 
MAP2                  0.668   microtubule-associated protein 2 isoform 1 
MAPT                  0.275   microtubule-associated protein tau isoform 4 
MAPT                  0.272   microtubule-associated protein tau isoform 6 
MAPT                  0.272   microtubule-associated protein tau isoform 1 
MAPT                  0.269   microtubule-associated protein tau isoform 2 
MAPT                  0.264   microtubule-associated protein tau isoform 5 
MAPT                  0.261   microtubule-associated protein tau isoform 3 
MAP4                  0.157   microtubule-associated protein 4 isoform 5 
MAP4                  0.154   microtubule-associated protein 4 isoform 4 
MAP4                  0.134   microtubule-associated protein 4 isoform 2 
MAP4                  0.134   microtubule-associated protein 4 isoform 1 
SYNPO2L               0.030   synaptopodin 2-like isoform a 
SYNPO2L               0.030   synaptopodin 2-like isoform b 
SRRM1                 0.029   serine/arginine repetitive matrix 1 
NACA                  0.028   nascent polypeptide-associated complex alpha subuni...
MUC7                  0.027   mucin 7, secreted precursor 
MUC7                  0.027   mucin 7, secreted precursor 
MUC7                  0.027   mucin 7, secreted precursor 
MUC2                  0.025   mucin 2 precursor 
LOC100133756          0.025   PREDICTED: hypothetical protein, partial 
KIAA0754              0.024   hypothetical protein LOC643314 
MUC16                 0.024   mucin 16 
MUC6                  0.024   mucin 6, gastric 
PRG4                  0.023   proteoglycan 4 isoform D 
PRG4                  0.023   proteoglycan 4 isoform C 
PRG4                  0.023   proteoglycan 4 isoform B 
PRG4                  0.023   proteoglycan 4 isoform A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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