Guide to the Human Genome
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Name: MAP2 Sequence: fasta or formatted (559aa) NCBI GI: 87578394
Description:

microtubule-associated protein 2 isoform 5

Referenced in:

Tubulins and Microtubules

Other entries for this name:
alt prot [502aa] microtubule-associated protein 2 isoform 4
alt prot [471aa] microtubule-associated protein 2 isoform 2
alt prot [1827aa] microtubule-associated protein 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         50           2
 C cysteine            0.5          3           1
 D aspartate           3.9         22           1
 E glutamate           6.1         34           2
 F phenylalanine       1.4          8           1
 G glycine             8.2         46           3
 H histidine           2.3         13           2
 I isoleucine          4.7         26           2
 K lysine              8.2         46           2
 L leucine             6.1         34           2
 M methionine          0.2          1           1
 N asparagine          3.8         21           1
 P proline             8.8         49           3
 Q glutamine           3.8         21           1
 R arginine            5.7         32           2
 S serine             13.1         73           3
 T threonine           7.5         42           2
 V valine              5.4         30           2
 W tryptophan          0.2          1           1
 Y tyrosine            1.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   microtubule-associated protein 2 isoform 5 
MAP2                  0.858   microtubule-associated protein 2 isoform 4 
MAP2                  0.717   microtubule-associated protein 2 isoform 2 
MAP2                  0.501   microtubule-associated protein 2 isoform 1 
MAPT                  0.283   microtubule-associated protein tau isoform 6 
MAPT                  0.282   microtubule-associated protein tau isoform 1 
MAPT                  0.281   microtubule-associated protein tau isoform 2 
MAPT                  0.276   microtubule-associated protein tau isoform 5 
MAPT                  0.276   microtubule-associated protein tau isoform 3 
MAPT                  0.215   microtubule-associated protein tau isoform 4 
MAP4                  0.181   microtubule-associated protein 4 isoform 4 
MAP4                  0.155   microtubule-associated protein 4 isoform 2 
MAP4                  0.153   microtubule-associated protein 4 isoform 1 
MAP4                  0.120   microtubule-associated protein 4 isoform 5 
MUC2                  0.029   mucin 2 precursor 
PRG4                  0.027   proteoglycan 4 isoform D 
PRG4                  0.027   proteoglycan 4 isoform C 
PRG4                  0.027   proteoglycan 4 isoform B 
PRG4                  0.027   proteoglycan 4 isoform A 
MUC5AC                0.026   mucin 5AC 
MUC12                 0.026   PREDICTED: mucin 12 
MUC5B                 0.026   mucin 5, subtype B, tracheobronchial 
TLE4                  0.026   transducin-like enhancer protein 4 
NACA                  0.026   nascent polypeptide-associated complex alpha subuni...
LOC100133756          0.026   PREDICTED: hypothetical protein, partial 
PHACTR4               0.026   phosphatase and actin regulator 4 isoform 2 
PHACTR4               0.026   phosphatase and actin regulator 4 isoform 1 
MUC7                  0.025   mucin 7, secreted precursor 
MUC7                  0.025   mucin 7, secreted precursor 
MUC7                  0.025   mucin 7, secreted precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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