Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 8659574
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8659574 transcription factor E3 [Homo sapiens]
(575 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8659574 transcription factor E3 [Homo sapiens] 1115 0.0
gi|38156699 microphthalmia-associated transcription factor isofo... 448 e-126
gi|38156703 microphthalmia-associated transcription factor isofo... 434 e-121
gi|38156701 microphthalmia-associated transcription factor isofo... 433 e-121
gi|38156705 microphthalmia-associated transcription factor isofo... 432 e-121
gi|38156697 microphthalmia-associated transcription factor isofo... 371 e-103
gi|4557755 microphthalmia-associated transcription factor isofor... 365 e-101
gi|24307933 transcription factor EB [Homo sapiens] 345 8e-95
gi|6912702 transcription factor EC isoform a [Homo sapiens] 257 2e-68
gi|64762402 transcription factor EC isoform b [Homo sapiens] 234 2e-61
gi|52630419 sterol regulatory element binding transcription fact... 61 3e-09
gi|22547195 sterol regulatory element binding transcription fact... 61 3e-09
gi|4507847 upstream stimulatory factor 2 isoform 1 [Homo sapiens] 57 5e-08
gi|27477113 sterol regulatory element-binding transcription fact... 56 1e-07
gi|46877105 upstream stimulatory factor 2 isoform 2 [Homo sapiens] 56 1e-07
gi|19923312 v-myc myelocytomatosis viral related oncogene, neuro... 53 9e-07
gi|6005934 upstream stimulatory factor 1 isoform 1 [Homo sapiens] 53 9e-07
gi|46877102 upstream stimulatory factor 1 isoform 2 [Homo sapiens] 53 9e-07
gi|14602433 Williams Beuren syndrome chromosome region 14 isofor... 50 4e-06
gi|91208420 bassoon protein [Homo sapiens] 50 7e-06
gi|114431248 hypothetical protein LOC205717 [Homo sapiens] 49 2e-05
gi|47717116 MAX interactor 1 isoform b [Homo sapiens] 48 3e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 47 5e-05
gi|9945318 MAX binding protein [Homo sapiens] 47 5e-05
gi|4758010 clock [Homo sapiens] 46 1e-04
gi|30795240 aryl hydrocarbon receptor nuclear translocator isofo... 45 1e-04
gi|4502231 aryl hydrocarbon receptor nuclear translocator isofor... 45 1e-04
gi|5453734 MAD4 [Homo sapiens] 44 3e-04
gi|146134388 YLP motif containing 1 [Homo sapiens] 44 5e-04
gi|56549694 enabled homolog isoform a [Homo sapiens] 43 7e-04
>gi|8659574 transcription factor E3 [Homo sapiens]
Length = 575
Score = 1115 bits (2885), Expect = 0.0
Identities = 575/575 (100%), Positives = 575/575 (100%)
Query: 1 MSHAAEPARDGVEASAEGPRAVFVLLEERRPADSAQLLSLNSLLPESGIVADIELENVLD 60
MSHAAEPARDGVEASAEGPRAVFVLLEERRPADSAQLLSLNSLLPESGIVADIELENVLD
Sbjct: 1 MSHAAEPARDGVEASAEGPRAVFVLLEERRPADSAQLLSLNSLLPESGIVADIELENVLD 60
Query: 61 PDSFYELKSQPLPLRSSLPISLQATPATPATLSASSSAGGSRTPAMSSSSSSRVLLRQQL 120
PDSFYELKSQPLPLRSSLPISLQATPATPATLSASSSAGGSRTPAMSSSSSSRVLLRQQL
Sbjct: 61 PDSFYELKSQPLPLRSSLPISLQATPATPATLSASSSAGGSRTPAMSSSSSSRVLLRQQL 120
Query: 121 MRAQAQEQERRERREQAAAAPFPSPAPASPAISVVGVSAGGHTLSRPPPAQVPREVLKVQ 180
MRAQAQEQERRERREQAAAAPFPSPAPASPAISVVGVSAGGHTLSRPPPAQVPREVLKVQ
Sbjct: 121 MRAQAQEQERRERREQAAAAPFPSPAPASPAISVVGVSAGGHTLSRPPPAQVPREVLKVQ 180
Query: 181 THLENPTRYHLQQARRQQVKQYLSTTLGPKLASQALTPPPGPASAQPLPAPEAAHTTGPT 240
THLENPTRYHLQQARRQQVKQYLSTTLGPKLASQALTPPPGPASAQPLPAPEAAHTTGPT
Sbjct: 181 THLENPTRYHLQQARRQQVKQYLSTTLGPKLASQALTPPPGPASAQPLPAPEAAHTTGPT 240
Query: 241 GSAPNSPMALLTIGSSSEKEIDDVIDEIISLESSYNDEMLSYLPGGTTGLQLPSTLPVSG 300
GSAPNSPMALLTIGSSSEKEIDDVIDEIISLESSYNDEMLSYLPGGTTGLQLPSTLPVSG
Sbjct: 241 GSAPNSPMALLTIGSSSEKEIDDVIDEIISLESSYNDEMLSYLPGGTTGLQLPSTLPVSG 300
Query: 301 NLLDVYSSQGVATPAITVSNSCPAELPNIKREISETEAKALLKERQKKDNHNLIERRRRF 360
NLLDVYSSQGVATPAITVSNSCPAELPNIKREISETEAKALLKERQKKDNHNLIERRRRF
Sbjct: 301 NLLDVYSSQGVATPAITVSNSCPAELPNIKREISETEAKALLKERQKKDNHNLIERRRRF 360
Query: 361 NINDRIKELGTLIPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRSKDLESRQRSLEQAN 420
NINDRIKELGTLIPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRSKDLESRQRSLEQAN
Sbjct: 361 NINDRIKELGTLIPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRSKDLESRQRSLEQAN 420
Query: 421 RSLQLRIQELELQAQIHGLPVPPTPGLLSLATTSASDSLKPEQLDIEEEGRPGAATFHVG 480
RSLQLRIQELELQAQIHGLPVPPTPGLLSLATTSASDSLKPEQLDIEEEGRPGAATFHVG
Sbjct: 421 RSLQLRIQELELQAQIHGLPVPPTPGLLSLATTSASDSLKPEQLDIEEEGRPGAATFHVG 480
Query: 481 GGPAQNAPHQQPPAPPSDALLDLHFPSDHLGDLGDPFHLGLEDILMEEEEGVVGGLSGGA 540
GGPAQNAPHQQPPAPPSDALLDLHFPSDHLGDLGDPFHLGLEDILMEEEEGVVGGLSGGA
Sbjct: 481 GGPAQNAPHQQPPAPPSDALLDLHFPSDHLGDLGDPFHLGLEDILMEEEEGVVGGLSGGA 540
Query: 541 LSPLRAASDPLLSSVSPAVSKASSRRSSFSMEEES 575
LSPLRAASDPLLSSVSPAVSKASSRRSSFSMEEES
Sbjct: 541 LSPLRAASDPLLSSVSPAVSKASSRRSSFSMEEES 575
>gi|38156699 microphthalmia-associated transcription factor isoform
1 [Homo sapiens]
Length = 520
Score = 448 bits (1153), Expect = e-126
Identities = 285/582 (48%), Positives = 347/582 (59%), Gaps = 124/582 (21%)
Query: 46 ESGIVADIELENVL--DPDSFYELKSQPLPLRSSLPISLQATPATPATLSASSSAGGSRT 103
ESGIV D E+ +P ++YELKSQPL SS + G S+
Sbjct: 4 ESGIVPDFEVGEEFHEEPKTYYELKSQPLKSSSS-----------------AEHPGASKP 46
Query: 104 PAMSSSSSSRVLLRQQLMRAQAQEQERRERREQAAAAPFPS---PAPASPAISVVGVSAG 160
P SSS +SR+LLRQQLMR Q QEQERRE++++ AA F P +PAI+V
Sbjct: 47 PISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQTPAINV------ 100
Query: 161 GHTLSRPPPAQVPREVLKVQTHLENPTRYHLQQARRQQVKQYLSTTLGPKLASQALTPP- 219
+ P QVP EVLKVQTHLENPT+YH+QQA+RQQVKQYLSTTL K A+Q L+ P
Sbjct: 101 SVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPC 160
Query: 220 ---PGPASAQPLPAPEAAHTTGPTGSAPNSPMALLTIGSSSEKE---------------- 260
PG P+P SAPNSPMA+LT+ S+ EKE
Sbjct: 161 PNQPGDHVMPPVPG----------SSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECP 210
Query: 261 ------------IDDVIDEIISLESSYNDEMLSYLPGGTTGLQLPSTLPVSGNLLDVYSS 308
+DDVID+IISLESSYN+E+L + LQ+ +TLPVSGNL+D+Y +
Sbjct: 211 GMNTHSRASCMQMDDVIDDIISLESSYNEEILGLMD---PALQMANTLPVSGNLIDLYGN 267
Query: 309 QGVATPAITVSNSCPAELPNIKREISETEAKALLKERQKKDNHNLIERRRRFNINDRIKE 368
QG+ P +T+SNSCPA LPNIKRE++E+EA+AL KERQKKDNHNLIERRRRFNINDRIKE
Sbjct: 268 QGLPPPGLTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKE 327
Query: 369 LGTLIPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQ 428
LGTLIPKS+DP+MRWNKGTILKASVDYIRKLQ+EQQR+K+LE+RQ+ LE ANR L LRIQ
Sbjct: 328 LGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQ 387
Query: 429 ELELQAQIHGLPVPPTPGLLS-----------LATTSASDSLKPEQLDI----EEEGRPG 473
ELE+QA+ HGL + P+ GL S + S L D+ + G
Sbjct: 388 ELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDG 447
Query: 474 AATF--HVGGGPAQNAPHQQPPAPPSDALLDLHFPSDHLGDLGDPFHLGLEDILMEEEEG 531
TF ++G G N + P S LEDILM++
Sbjct: 448 TITFNNNLGTGTEANQAYSVPTKMGSK----------------------LEDILMDD--- 482
Query: 532 VVGGLSGGALSPLRAASDPLLSSVSPAVSKASSRRSSFSMEE 573
LSP+ +DPLLSSVSP SK SSRRSS SMEE
Sbjct: 483 --------TLSPV-GVTDPLLSSVSPGASKTSSRRSSMSMEE 515
>gi|38156703 microphthalmia-associated transcription factor isoform
2 [Homo sapiens]
Length = 504
Score = 434 bits (1116), Expect = e-121
Identities = 269/534 (50%), Positives = 328/534 (61%), Gaps = 105/534 (19%)
Query: 92 LSASSSAGGSRTPAMSSSSSSRVLLRQQLMRAQAQEQERRERREQAAAAPFPS---PAPA 148
LS++ G S+ P SSS +SR+LLRQQLMR Q QEQERRE++++ AA F P
Sbjct: 19 LSSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQ 78
Query: 149 SPAISVVGVSAGGHTLSRPPPAQVPREVLKVQTHLENPTRYHLQQARRQQVKQYLSTTLG 208
+PAI+V + P QVP EVLKVQTHLENPT+YH+QQA+RQQVKQYLSTTL
Sbjct: 79 TPAINV------SVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLA 132
Query: 209 PKLASQALTPP----PGPASAQPLPAPEAAHTTGPTGSAPNSPMALLTIGSSSEKE---- 260
K A+Q L+ P PG P+P SAPNSPMA+LT+ S+ EKE
Sbjct: 133 NKHANQVLSLPCPNQPGDHVMPPVPG----------SSAPNSPMAMLTLNSNCEKEGFYK 182
Query: 261 ------------------------IDDVIDEIISLESSYNDEMLSYLPGGTTGLQLPSTL 296
+DDVID+IISLESSYN+E+L + LQ+ +TL
Sbjct: 183 FEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEEILGLMD---PALQMANTL 239
Query: 297 PVSGNLLDVYSSQGVATPAITVSNSCPAELPNIKREISETEAKALLKERQKKDNHNLIER 356
PVSGNL+D+Y +QG+ P +T+SNSCPA LPNIKRE++E+EA+AL KERQKKDNHNLIER
Sbjct: 240 PVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIER 299
Query: 357 RRRFNINDRIKELGTLIPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRSKDLESRQRSL 416
RRRFNINDRIKELGTLIPKS+DP+MRWNKGTILKASVDYIRKLQ+EQQR+K+LE+RQ+ L
Sbjct: 300 RRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKL 359
Query: 417 EQANRSLQLRIQELELQAQIHGLPVPPTPGLLS-----------LATTSASDSLKPEQLD 465
E ANR L LRIQELE+QA+ HGL + P+ GL S + S L D
Sbjct: 360 EHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHAD 419
Query: 466 I----EEEGRPGAATF--HVGGGPAQNAPHQQPPAPPSDALLDLHFPSDHLGDLGDPFHL 519
+ + G TF ++G G N + P S
Sbjct: 420 LTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSK--------------------- 458
Query: 520 GLEDILMEEEEGVVGGLSGGALSPLRAASDPLLSSVSPAVSKASSRRSSFSMEE 573
LEDILM++ LSP+ +DPLLSSVSP SK SSRRSS SMEE
Sbjct: 459 -LEDILMDD-----------TLSPV-GVTDPLLSSVSPGASKTSSRRSSMSMEE 499
>gi|38156701 microphthalmia-associated transcription factor isoform
3 [Homo sapiens]
Length = 519
Score = 433 bits (1114), Expect = e-121
Identities = 273/541 (50%), Positives = 330/541 (60%), Gaps = 108/541 (19%)
Query: 88 TPATLSASSSA---GGSRTPAMSSSSSSRVLLRQQLMRAQAQEQERRERREQAAAAPFPS 144
T S SSSA G S+ P SSS +SR+LLRQQLMR Q QEQERRE++++ AA F
Sbjct: 27 TLCLFSRSSSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQ 86
Query: 145 ---PAPASPAISVVGVSAGGHTLSRPPPAQVPREVLKVQTHLENPTRYHLQQARRQQVKQ 201
P +PAI+V + P QVP EVLKVQTHLENPT+YH+QQA+RQQVKQ
Sbjct: 87 QRVPVSQTPAINV------SVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQ 140
Query: 202 YLSTTLGPKLASQALTPP----PGPASAQPLPAPEAAHTTGPTGSAPNSPMALLTIGSSS 257
YLSTTL K A+Q L+ P PG P+P SAPNSPMA+LT+ S+
Sbjct: 141 YLSTTLANKHANQVLSLPCPNQPGDHVMPPVPG----------SSAPNSPMAMLTLNSNC 190
Query: 258 EKE----------------------------IDDVIDEIISLESSYNDEMLSYLPGGTTG 289
EKE +DDVID+IISLESSYN+E+L +
Sbjct: 191 EKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEEILGLMD---PA 247
Query: 290 LQLPSTLPVSGNLLDVYSSQGVATPAITVSNSCPAELPNIKREISETEAKALLKERQKKD 349
LQ+ +TLPVSGNL+D+Y +QG+ P +T+SNSCPA LPNIKRE++E+EA+AL KERQKKD
Sbjct: 248 LQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEARALAKERQKKD 307
Query: 350 NHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRSKDL 409
NHNLIERRRRFNINDRIKELGTLIPKS+DP+MRWNKGTILKASVDYIRKLQ+EQQR+K+L
Sbjct: 308 NHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKEL 367
Query: 410 ESRQRSLEQANRSLQLRIQELELQAQIHGLPVPPTPGLLS-----------LATTSASDS 458
E+RQ+ LE ANR L LRIQELE+QA+ HGL + P+ GL S + S
Sbjct: 368 ENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQD 427
Query: 459 LKPEQLDI----EEEGRPGAATF--HVGGGPAQNAPHQQPPAPPSDALLDLHFPSDHLGD 512
L D+ + G TF ++G G N + P S
Sbjct: 428 LLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSK-------------- 473
Query: 513 LGDPFHLGLEDILMEEEEGVVGGLSGGALSPLRAASDPLLSSVSPAVSKASSRRSSFSME 572
LEDILM++ LSP+ +DPLLSSVSP SK SSRRSS SME
Sbjct: 474 --------LEDILMDD-----------TLSPV-GVTDPLLSSVSPGASKTSSRRSSMSME 513
Query: 573 E 573
E
Sbjct: 514 E 514
>gi|38156705 microphthalmia-associated transcription factor isoform
6 [Homo sapiens]
Length = 495
Score = 432 bits (1112), Expect = e-121
Identities = 268/533 (50%), Positives = 327/533 (61%), Gaps = 105/533 (19%)
Query: 93 SASSSAGGSRTPAMSSSSSSRVLLRQQLMRAQAQEQERRERREQAAAAPFPS---PAPAS 149
S++ G S+ P SSS +SR+LLRQQLMR Q QEQERRE++++ AA F P +
Sbjct: 11 SSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQT 70
Query: 150 PAISVVGVSAGGHTLSRPPPAQVPREVLKVQTHLENPTRYHLQQARRQQVKQYLSTTLGP 209
PAI+V + P QVP EVLKVQTHLENPT+YH+QQA+RQQVKQYLSTTL
Sbjct: 71 PAINV------SVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLAN 124
Query: 210 KLASQALTPP----PGPASAQPLPAPEAAHTTGPTGSAPNSPMALLTIGSSSEKE----- 260
K A+Q L+ P PG P+P SAPNSPMA+LT+ S+ EKE
Sbjct: 125 KHANQVLSLPCPNQPGDHVMPPVPG----------SSAPNSPMAMLTLNSNCEKEGFYKF 174
Query: 261 -----------------------IDDVIDEIISLESSYNDEMLSYLPGGTTGLQLPSTLP 297
+DDVID+IISLESSYN+E+L + LQ+ +TLP
Sbjct: 175 EEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEEILGLMD---PALQMANTLP 231
Query: 298 VSGNLLDVYSSQGVATPAITVSNSCPAELPNIKREISETEAKALLKERQKKDNHNLIERR 357
VSGNL+D+Y +QG+ P +T+SNSCPA LPNIKRE++E+EA+AL KERQKKDNHNLIERR
Sbjct: 232 VSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERR 291
Query: 358 RRFNINDRIKELGTLIPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRSKDLESRQRSLE 417
RRFNINDRIKELGTLIPKS+DP+MRWNKGTILKASVDYIRKLQ+EQQR+K+LE+RQ+ LE
Sbjct: 292 RRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLE 351
Query: 418 QANRSLQLRIQELELQAQIHGLPVPPTPGLLS-----------LATTSASDSLKPEQLDI 466
ANR L LRIQELE+QA+ HGL + P+ GL S + S L D+
Sbjct: 352 HANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADL 411
Query: 467 ----EEEGRPGAATF--HVGGGPAQNAPHQQPPAPPSDALLDLHFPSDHLGDLGDPFHLG 520
+ G TF ++G G N + P S
Sbjct: 412 TCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSK---------------------- 449
Query: 521 LEDILMEEEEGVVGGLSGGALSPLRAASDPLLSSVSPAVSKASSRRSSFSMEE 573
LEDILM++ LSP+ +DPLLSSVSP SK SSRRSS SMEE
Sbjct: 450 LEDILMDD-----------TLSPV-GVTDPLLSSVSPGASKTSSRRSSMSMEE 490
>gi|38156697 microphthalmia-associated transcription factor isoform
5 [Homo sapiens]
Length = 413
Score = 371 bits (953), Expect = e-103
Identities = 227/445 (51%), Positives = 275/445 (61%), Gaps = 96/445 (21%)
Query: 178 KVQTHLENPTRYHLQQARRQQVKQYLSTTLGPKLASQALTPP----PGPASAQPLPAPEA 233
+VQTHLENPT+YH+QQA+RQQVKQYLSTTL K A+Q L+ P PG P+P
Sbjct: 11 QVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPG--- 67
Query: 234 AHTTGPTGSAPNSPMALLTIGSSSEKE----------------------------IDDVI 265
SAPNSPMA+LT+ S+ EKE +DDVI
Sbjct: 68 -------SSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVI 120
Query: 266 DEIISLESSYNDEMLSYLPGGTTGLQLPSTLPVSGNLLDVYSSQGVATPAITVSNSCPAE 325
D+IISLESSYN+E+L + LQ+ +TLPVSGNL+D+Y +QG+ P +T+SNSCPA
Sbjct: 121 DDIISLESSYNEEILGLMD---PALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPAN 177
Query: 326 LPNIKREISETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNK 385
LPNIKRE++E+EA+AL KERQKKDNHNLIERRRRFNINDRIKELGTLIPKS+DP+MRWNK
Sbjct: 178 LPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 237
Query: 386 GTILKASVDYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQELELQAQIHGLPVPPTP 445
GTILKASVDYIRKLQ+EQQR+K+LE+RQ+ LE ANR L LRIQELE+QA+ HGL + P+
Sbjct: 238 GTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPST 297
Query: 446 GLLS-----------LATTSASDSLKPEQLDI----EEEGRPGAATF--HVGGGPAQNAP 488
GL S + S L D+ + G TF ++G G N
Sbjct: 298 GLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQA 357
Query: 489 HQQPPAPPSDALLDLHFPSDHLGDLGDPFHLGLEDILMEEEEGVVGGLSGGALSPLRAAS 548
+ P S LEDILM++ LSP+ +
Sbjct: 358 YSVPTKMGSK----------------------LEDILMDD-----------TLSPV-GVT 383
Query: 549 DPLLSSVSPAVSKASSRRSSFSMEE 573
DPLLSSVSP SK SSRRSS SMEE
Sbjct: 384 DPLLSSVSPGASKTSSRRSSMSMEE 408
>gi|4557755 microphthalmia-associated transcription factor isoform 4
[Homo sapiens]
Length = 419
Score = 365 bits (936), Expect = e-101
Identities = 227/451 (50%), Positives = 275/451 (60%), Gaps = 102/451 (22%)
Query: 178 KVQTHLENPTRYHLQQARRQQVKQYLSTTLGPKLASQALTPP----PGPASAQPLPAPEA 233
+VQTHLENPT+YH+QQA+RQQVKQYLSTTL K A+Q L+ P PG P+P
Sbjct: 11 QVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPG--- 67
Query: 234 AHTTGPTGSAPNSPMALLTIGSSSEKE----------------------------IDDVI 265
SAPNSPMA+LT+ S+ EKE +DDVI
Sbjct: 68 -------SSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVI 120
Query: 266 DEIISLESSYNDEMLSYLPGGTTGLQLPSTLPVSGNLLDVYSSQGVATPAITVSNSCPAE 325
D+IISLESSYN+E+L + LQ+ +TLPVSGNL+D+Y +QG+ P +T+SNSCPA
Sbjct: 121 DDIISLESSYNEEILGLMD---PALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPAN 177
Query: 326 LPNIKREIS------ETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDP 379
LPNIKRE++ E+EA+AL KERQKKDNHNLIERRRRFNINDRIKELGTLIPKS+DP
Sbjct: 178 LPNIKRELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDP 237
Query: 380 EMRWNKGTILKASVDYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQELELQAQIHGL 439
+MRWNKGTILKASVDYIRKLQ+EQQR+K+LE+RQ+ LE ANR L LRIQELE+QA+ HGL
Sbjct: 238 DMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGL 297
Query: 440 PVPPTPGLLS-----------LATTSASDSLKPEQLDI----EEEGRPGAATF--HVGGG 482
+ P+ GL S + S L D+ + G TF ++G G
Sbjct: 298 SLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTG 357
Query: 483 PAQNAPHQQPPAPPSDALLDLHFPSDHLGDLGDPFHLGLEDILMEEEEGVVGGLSGGALS 542
N + P S LEDILM++ LS
Sbjct: 358 TEANQAYSVPTKMGSK----------------------LEDILMDD-----------TLS 384
Query: 543 PLRAASDPLLSSVSPAVSKASSRRSSFSMEE 573
P+ +DPLLSSVSP SK SSRRSS SMEE
Sbjct: 385 PV-GVTDPLLSSVSPGASKTSSRRSSMSMEE 414
>gi|24307933 transcription factor EB [Homo sapiens]
Length = 476
Score = 345 bits (884), Expect = 8e-95
Identities = 226/499 (45%), Positives = 294/499 (58%), Gaps = 64/499 (12%)
Query: 111 SSRVLLRQQLMRAQAQEQERRERREQAAAAPFPSP----------APASPAISVVGVSAG 160
+SR+ LR QLMR QAQ++E+RER +Q A + P +PAI+
Sbjct: 2 ASRIGLRMQLMREQAQQEEQRERMQQQAVMHYMQQQQQQQQQQLGGPPTPAINTPV---- 57
Query: 161 GHTLSRPPPAQVPREVLKVQTHLENPTRYHLQQARRQQVKQYLSTTLGPKLASQAL---- 216
H S PP VP EVLKVQ++LENPT YHLQQ++ Q+V++YLS T G K A+
Sbjct: 58 -HFQSPPP---VPGEVLKVQSYLENPTSYHLQQSQHQKVREYLSETYGNKFAAHISPAQG 113
Query: 217 TPPPGPASAQPLPAPEAAHTTGPTG--SAPNSPMALLTIGSSSEKEIDDVIDEIISLESS 274
+P P PA++ P A H + SAPNSPMA+L IGS+ E+E+DDVID I+ L
Sbjct: 114 SPKPPPAAS---PGVRAGHVLSSSAGNSAPNSPMAMLHIGSNPERELDDVIDNIMRL--- 167
Query: 275 YNDEMLSYLPGGTTGLQLPSTLPVSGNLLDVYSSQGVATPAIT--VSNSCPAELPNIKRE 332
D++L Y+ +Q+P+TLP+S + L+VYSS T ++ S+SCPA+L KRE
Sbjct: 168 --DDVLGYI---NPEMQMPNTLPLSSSHLNVYSSDPQVTASLVGVTSSSCPADLTQ-KRE 221
Query: 333 ISETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNKGTILKAS 392
+++ E++AL KERQKKDNHNLIERRRRFNINDRIKELG LIPK++D ++RWNKGTILKAS
Sbjct: 222 LTDAESRALAKERQKKDNHNLIERRRRFNINDRIKELGMLIPKANDLDVRWNKGTILKAS 281
Query: 393 VDYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQELELQAQIHGLPVPPTPGLLSLAT 452
VDYIR++QK+ Q+S++LE+ R LE N+ L LRIQELE+QA++HGLP G+
Sbjct: 282 VDYIRRMQKDLQKSRELENHSRRLEMTNKQLWLRIQELEMQARVHGLPTTSPSGM----- 336
Query: 453 TSASDSLKPEQLDIEEEGRPGAATFHVGGGPAQNAPHQQPPAPPSDALLDLHFPSDHLGD 512
A + + + ++ E PG A P PP P P HL
Sbjct: 337 NMAELAQQVVKQELPSEEGPGEALMLGAEVPDPEPLPALPPQAPLPLPTQPPSPFHHLDF 396
Query: 513 LGDPFHLGLEDILMEEEEGVVGGLSGGALSP------------------LRAASDPLLSS 554
G ED E G L+ G SP L ASDPLLS+
Sbjct: 397 SHSLSFGGRED---EGPPGYPEPLAPGHGSPFPSLSKKDLDLMLLDDSLLPLASDPLLST 453
Query: 555 VSPAVSKASSRRSSFSMEE 573
+SP SKASSRRSSFSMEE
Sbjct: 454 MSPEASKASSRRSSFSMEE 472
>gi|6912702 transcription factor EC isoform a [Homo sapiens]
Length = 347
Score = 257 bits (657), Expect = 2e-68
Identities = 166/360 (46%), Positives = 213/360 (59%), Gaps = 41/360 (11%)
Query: 222 PASAQPLPAPEAAHTT--GPTGSAPNSPMALLTIGSSSEK---EIDDVIDEIISLESSYN 276
PA P + AHTT G N LL IG + ++DVI++II +ESS+
Sbjct: 17 PAVPSGGPLVQHAHTTLDSDAGLTENPLTKLLAIGKEDDNAQWHMEDVIEDIIGMESSFK 76
Query: 277 DEMLSYLPGGTTGLQLPSTLPVSGNLLDVYSSQGVATPAIT--VSNSCPAELPNIKREIS 334
+E G + L + TL SG++LDVYS + +P S SCP+ LP +KREI+
Sbjct: 77 EE------GADSPLLMQRTL--SGSILDVYSGEQGISPINMGLTSASCPSSLP-MKREIT 127
Query: 335 ETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNKGTILKASVD 394
ET+ +AL KERQKKDNHNLIERRRR+NIN RIKELGTLIPKS+DP+MRWNKGTILKASV+
Sbjct: 128 ETDTRALAKERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVE 187
Query: 395 YIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQELELQAQIHGLPVPPTPGLLSLATTS 454
YI+ LQKEQQR+++LE RQ+ LEQANR L LRIQELE+QA+ HGLP + G + L
Sbjct: 188 YIKWLQKEQQRARELEHRQKKLEQANRRLLLRIQELEIQARTHGLPTLASLGTVDLGAHV 247
Query: 455 ASDSLKPEQLDIEEEGRPGAATFHVGGGPAQNAPHQQPPAPP-SDALLDLHFPSDHLGDL 513
PEQ ++ Q Q P+P D + P + DL
Sbjct: 248 TKQQSHPEQNSVDY---------------CQQLTVSQGPSPELCDQAIAFSDPLSYFTDL 292
Query: 514 GDPFHLGLEDILMEEEEGVVGGLSGGALSPLRAASDPLLSSVSPAVSKASSRRSSFSMEE 573
++EE+ + G L +SP +DPLLS+ SPAVSK SSRRSSFS ++
Sbjct: 293 S-------FSAALKEEQRLDGMLLDDTISPF--GTDPLLSATSPAVSKESSRRSSFSSDD 343
>gi|64762402 transcription factor EC isoform b [Homo sapiens]
Length = 318
Score = 234 bits (596), Expect = 2e-61
Identities = 140/279 (50%), Positives = 177/279 (63%), Gaps = 28/279 (10%)
Query: 298 VSGNLLDVYSSQGVATPAIT--VSNSCPAELPNIKREISETEAKALLKERQKKDNHNLIE 355
+SG++LDVYS + +P S SCP+ LP +KREI+ET+ +AL KERQKKDNHNLIE
Sbjct: 61 LSGSILDVYSGEQGISPINMGLTSASCPSSLP-MKREITETDTRALAKERQKKDNHNLIE 119
Query: 356 RRRRFNINDRIKELGTLIPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRSKDLESRQRS 415
RRRR+NIN RIKELGTLIPKS+DP+MRWNKGTILKASV+YI+ LQKEQQR+++LE RQ+
Sbjct: 120 RRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVEYIKWLQKEQQRARELEHRQKK 179
Query: 416 LEQANRSLQLRIQELELQAQIHGLPVPPTPGLLSLATTSASDSLKPEQLDIEEEGRPGAA 475
LEQANR L LRIQELE+QA+ HGLP + G + L PEQ ++
Sbjct: 180 LEQANRRLLLRIQELEIQARTHGLPTLASLGTVDLGAHVTKQQSHPEQNSVDY------- 232
Query: 476 TFHVGGGPAQNAPHQQPPAPP-SDALLDLHFPSDHLGDLGDPFHLGLEDILMEEEEGVVG 534
Q Q P+P D + P + DL ++EE+ + G
Sbjct: 233 --------CQQLTVSQGPSPELCDQAIAFSDPLSYFTDLS-------FSAALKEEQRLDG 277
Query: 535 GLSGGALSPLRAASDPLLSSVSPAVSKASSRRSSFSMEE 573
L +SP +DPLLS+ SPAVSK SSRRSSFS ++
Sbjct: 278 MLLDDTISPF--GTDPLLSATSPAVSKESSRRSSFSSDD 314
>gi|52630419 sterol regulatory element binding transcription factor
1 isoform a [Homo sapiens]
Length = 1177
Score = 60.8 bits (146), Expect = 3e-09
Identities = 94/372 (25%), Positives = 140/372 (37%), Gaps = 45/372 (12%)
Query: 60 DPDSFYELKSQPLPLRSSLPISLQATPATPATLSASSSAGG--SRTPAMSSSSSSRVLLR 117
D S L P L SSL L A P+ LS A P+M + S +
Sbjct: 95 DTSSPGSLSPPPATLSSSLEAFLSGPQAAPSPLSPPQPAPTPLKMYPSMPAFSPGPGIKE 154
Query: 118 QQLMRAQAQEQERRERREQAAAAPFPSPAP----ASPAISVVGVSAGGHTLSRPPPAQVP 173
+ + + Q + FP+PAP ++P + G T S P Q P
Sbjct: 155 ESVPLSILQTPTPQPLPGALLPQSFPAPAPPQFSSTPVLGYPSPPGGFSTGSPPGNTQQP 214
Query: 174 REVLKVQTHLENPTRYHLQQARRQQVKQYLSTTLGPKLASQALTPPPGPASAQPLPAPEA 233
L + + P Q + +Q L+ T P A T + Q +P
Sbjct: 215 LPGLPLASPPGVPPVSLHTQVQSVVPQQLLTVTAAPTAAPVTTTVT---SQIQQVPVLLQ 271
Query: 234 AHTTGPTGSAPNSPMALLTIGSSSEKEIDDVIDEIISLESSYNDEMLSYLPGGTTGLQLP 293
H + LLT + + LS L GTT P
Sbjct: 272 PHFI-------KADSLLLTAMKTDGATVKAA--------------GLSPLVSGTTVQTGP 310
Query: 294 STLPVSGNLLDVYSSQGVATPAITVSNSCPAELPNIKREISETEAKALLKER-QKKDNHN 352
VSG + +AT + V AE I R + ++A A + R +K+ HN
Sbjct: 311 LPTLVSGGTI-------LATVPLVVD----AEKLPINRLAAGSKAPASAQSRGEKRTAHN 359
Query: 353 LIERRRRFNINDRIKELGTLIPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRSKDLESR 412
IE+R R +IND+I EL L+ + E + NK +L+ ++DYIR LQ Q+ K
Sbjct: 360 AIEKRYRSSINDKIIELKDLVVGT---EAKLNKSAVLRKAIDYIRFLQHSNQKLKQENLS 416
Query: 413 QRSLEQANRSLQ 424
R+ ++SL+
Sbjct: 417 LRTAVHKSKSLK 428
>gi|22547195 sterol regulatory element binding transcription factor
1 isoform b [Homo sapiens]
Length = 1147
Score = 60.8 bits (146), Expect = 3e-09
Identities = 94/372 (25%), Positives = 140/372 (37%), Gaps = 45/372 (12%)
Query: 60 DPDSFYELKSQPLPLRSSLPISLQATPATPATLSASSSAGG--SRTPAMSSSSSSRVLLR 117
D S L P L SSL L A P+ LS A P+M + S +
Sbjct: 65 DTSSPGSLSPPPATLSSSLEAFLSGPQAAPSPLSPPQPAPTPLKMYPSMPAFSPGPGIKE 124
Query: 118 QQLMRAQAQEQERRERREQAAAAPFPSPAP----ASPAISVVGVSAGGHTLSRPPPAQVP 173
+ + + Q + FP+PAP ++P + G T S P Q P
Sbjct: 125 ESVPLSILQTPTPQPLPGALLPQSFPAPAPPQFSSTPVLGYPSPPGGFSTGSPPGNTQQP 184
Query: 174 REVLKVQTHLENPTRYHLQQARRQQVKQYLSTTLGPKLASQALTPPPGPASAQPLPAPEA 233
L + + P Q + +Q L+ T P A T + Q +P
Sbjct: 185 LPGLPLASPPGVPPVSLHTQVQSVVPQQLLTVTAAPTAAPVTTTVT---SQIQQVPVLLQ 241
Query: 234 AHTTGPTGSAPNSPMALLTIGSSSEKEIDDVIDEIISLESSYNDEMLSYLPGGTTGLQLP 293
H + LLT + + LS L GTT P
Sbjct: 242 PHFI-------KADSLLLTAMKTDGATVKAA--------------GLSPLVSGTTVQTGP 280
Query: 294 STLPVSGNLLDVYSSQGVATPAITVSNSCPAELPNIKREISETEAKALLKER-QKKDNHN 352
VSG + +AT + V AE I R + ++A A + R +K+ HN
Sbjct: 281 LPTLVSGGTI-------LATVPLVVD----AEKLPINRLAAGSKAPASAQSRGEKRTAHN 329
Query: 353 LIERRRRFNINDRIKELGTLIPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRSKDLESR 412
IE+R R +IND+I EL L+ + E + NK +L+ ++DYIR LQ Q+ K
Sbjct: 330 AIEKRYRSSINDKIIELKDLVVGT---EAKLNKSAVLRKAIDYIRFLQHSNQKLKQENLS 386
Query: 413 QRSLEQANRSLQ 424
R+ ++SL+
Sbjct: 387 LRTAVHKSKSLK 398
>gi|4507847 upstream stimulatory factor 2 isoform 1 [Homo sapiens]
Length = 346
Score = 57.0 bits (136), Expect = 5e-08
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 42/226 (18%)
Query: 215 ALTPPPGPASAQPLPAPEAAHTTGPTGSAPNSPMALLTIGSSSEKEIDDVIDEIISLESS 274
A + PPGPA+ PL + + G SP A E +S E+
Sbjct: 130 AASVPPGPAAPFPLAVIQNPFSNG------GSPAA-----------------EAVSGEAR 166
Query: 275 YNDEMLSYLP----GGTTGLQLPST---LPVSGNLLDVYSSQGVATPAITVSNSCPAELP 327
+ +Y P G TT + + +T L G + + Q V T P P
Sbjct: 167 F-----AYFPASSVGDTTAVSVQTTDQSLQAGGQFYVMMTPQDVLQTG-TQRTIAPRTHP 220
Query: 328 NIKREISETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIP--KSSDPEMRWNK 385
+I T ++ +++ HN +ERRRR IN+ I +L +IP + + + +K
Sbjct: 221 -YSPKIDGTRTP---RDERRRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNSKTGASK 276
Query: 386 GTILKASVDYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQELE 431
G IL + DYIR+L++ QR ++ L+ N L+ +I+EL+
Sbjct: 277 GGILSKACDYIRELRQTNQRMQETFKEAERLQMDNELLRQQIEELK 322
>gi|27477113 sterol regulatory element-binding transcription factor
2 [Homo sapiens]
Length = 1141
Score = 55.8 bits (133), Expect = 1e-07
Identities = 84/378 (22%), Positives = 151/378 (39%), Gaps = 66/378 (17%)
Query: 86 PATPATLSASSSAGGSRTPAMSSSSSSRVLLRQQLMRAQAQEQERRERREQAAAAPFPSP 145
P + + S+S S+G S + + SSS + +R P SP
Sbjct: 55 PGSGGSGSSSGSSGSSSSSSNGRGSSSGAV------------DPSVQRSFTQVTLPSFSP 102
Query: 146 APASPAISVVGVSAGGHTLS-----------RPPPAQVPREVLKVQTHLENPTRYHLQQA 194
+ ASP + V ++ RP P P+ L+ QT + PT Q
Sbjct: 103 SAASPQAPTLQVKVSPTSVPTTPRATPILQPRPQPQPQPQTQLQQQTVMITPTFSTTPQT 162
Query: 195 RRQQ---VKQYLSTT---LGPKLASQALTPPPGPASAQP-LPAPEAAHTTGPTGSAPNSP 247
R Q + Q +T+ L P++ S + P + Q + +A T +
Sbjct: 163 RIIQQPLIYQNAATSFQVLQPQVQSLVTSSQVQPVTIQQQVQTVQAQRVLTQTANGTLQT 222
Query: 248 MALLTIGSSSEKEIDDVI----DEIISLES---------------SYNDEMLSYL--PGG 286
+A T+ + + ++ V +II +S + + L+ L P
Sbjct: 223 LAPATVQTVAAPQVQQVPVLVQPQIIKTDSLVLTTLKTDGSPVMAAVQNPALTALTTPIQ 282
Query: 287 TTGLQLPSTLPVSGNLLDVYSSQGVATPAITVSNSCPAELPNIKREISETEAKALLKERQ 346
T LQ+P+ + SG +L P + P + + + + E KE +
Sbjct: 283 TAALQVPTLVGSSGTIL-------TTMPVMMGQEKVP--IKQVPGGVKQLEPP---KEGE 330
Query: 347 KKDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRS 406
++ HN+IE+R R +IND+I EL L+ +D +M +K +L+ ++DYI+ LQ+ +
Sbjct: 331 RRTTHNIIEKRYRSSINDKIIELKDLV-MGTDAKM--HKSGVLRKAIDYIKYLQQVNHKL 387
Query: 407 KDLESRQRSLEQANRSLQ 424
+ + Q N+ L+
Sbjct: 388 RQENMVLKLANQKNKLLK 405
>gi|46877105 upstream stimulatory factor 2 isoform 2 [Homo sapiens]
Length = 279
Score = 55.8 bits (133), Expect = 1e-07
Identities = 30/91 (32%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 343 KERQKKDNHNLIERRRRFNINDRIKELGTLIP--KSSDPEMRWNKGTILKASVDYIRKLQ 400
++ +++ HN +ERRRR IN+ I +L +IP + + + +KG IL + DYIR+L+
Sbjct: 165 RDERRRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNSKTGASKGGILSKACDYIRELR 224
Query: 401 KEQQRSKDLESRQRSLEQANRSLQLRIQELE 431
+ QR ++ L+ N L+ +I+EL+
Sbjct: 225 QTNQRMQETFKEAERLQMDNELLRQQIEELK 255
>gi|19923312 v-myc myelocytomatosis viral related oncogene,
neuroblastoma derived [Homo sapiens]
Length = 464
Score = 52.8 bits (125), Expect = 9e-07
Identities = 76/344 (22%), Positives = 133/344 (38%), Gaps = 56/344 (16%)
Query: 117 RQQLMRAQAQE-QERRERREQAAAAPFPSPAPASPAISVVGVSAGGHTLSRPPPAQVPRE 175
R++L RA +++ Q R + A P ASPA G +AG PA++
Sbjct: 123 REKLERAVSEKLQHGRGPPTAGSTAQSPGAGAASPAGRGHGGAAGAGRAGAALPAELAHP 182
Query: 176 VLK-VQTHLENPTRYHLQQARRQQVKQYLSTTLGPKLASQALTPPPGPASAQPLPAPEAA 234
+ V + P + ++ + GP +AS A P A P P
Sbjct: 183 AAECVDPAVVFPFPVNKREPAPVPAAPASAPAAGPAVASGAGIAAPAGAPGVAPPRPGGR 242
Query: 235 HTTGPTGSAPNSPMALLTIGSSSEKEIDDVIDE---------IISLE---SSYNDEMLSY 282
T+G AL T G + + DD DE ++++E SS N + ++
Sbjct: 243 QTSG------GDHKALSTSGEDTLSDSDDEDDEEEDEEEEIDVVTVEKRRSSSNTKAVTT 296
Query: 283 L------------PGGTTGLQLPSTLPVSGNLLDVYSSQGVATPAITVSNSCPAELPNIK 330
PG +L + L ++ A P+ V + IK
Sbjct: 297 FTITVRPKNAALGPGRAQSSEL-----ILKRCLPIHQQHNYAAPSPYVESEDAPPQKKIK 351
Query: 331 REISETEAKALL--------------KERQKKDNHNLIERRRRFNINDRIKELGTLIPKS 376
E S K+++ ++ +++ NHN++ER+RR ++ L +P+
Sbjct: 352 SEASPRPLKSVIPPKAKSLSPRNSDSEDSERRRNHNILERQRRNDLRSSFLTLRDHVPEL 411
Query: 377 SDPEMRWNKGTILKASVDYIRKLQKEQQR----SKDLESRQRSL 416
E + K ILK + +Y+ LQ E+ + + L++RQ+ L
Sbjct: 412 VKNE-KAAKVVILKKATEYVHSLQAEEHQLLLEKEKLQARQQQL 454
>gi|6005934 upstream stimulatory factor 1 isoform 1 [Homo sapiens]
Length = 310
Score = 52.8 bits (125), Expect = 9e-07
Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 9/116 (7%)
Query: 335 ETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSS--DPEMRWNKGTILKAS 392
++EA ++ +++ HN +ERRRR IN+ I +L +IP S + +KG IL +
Sbjct: 188 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 247
Query: 393 VDYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQELE-----LQAQI--HGLPV 441
DYI++L++ R + L+ N L+ ++++L+ L+AQ+ HGL V
Sbjct: 248 CDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHHGLEV 303
>gi|46877102 upstream stimulatory factor 1 isoform 2 [Homo sapiens]
Length = 251
Score = 52.8 bits (125), Expect = 9e-07
Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 9/116 (7%)
Query: 335 ETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSS--DPEMRWNKGTILKAS 392
++EA ++ +++ HN +ERRRR IN+ I +L +IP S + +KG IL +
Sbjct: 129 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 188
Query: 393 VDYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQELE-----LQAQI--HGLPV 441
DYI++L++ R + L+ N L+ ++++L+ L+AQ+ HGL V
Sbjct: 189 CDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHHGLEV 244
>gi|14602433 Williams Beuren syndrome chromosome region 14 isoform
alpha [Homo sapiens]
Length = 852
Score = 50.4 bits (119), Expect = 4e-06
Identities = 74/302 (24%), Positives = 120/302 (39%), Gaps = 72/302 (23%)
Query: 134 REQAAAAPFPSPAPASPAISVVGVSAGGHTLSRPPPAQVPREVLKVQTHLENPTRYHLQQ 193
R Q A+ P +PA ASP + + L++ A P + L + L + T
Sbjct: 501 RGQKASPPTLAPATASPPTTA---GSNNPCLTQLLTAAKPEQAL--EPPLVSSTLLRSPG 555
Query: 194 ARRQQVKQYLSTTLGPKLASQALTPPPGPAS---AQPLPAPEAAHTTGPTGSAPNSPMAL 250
+ ++ V ++ T L P A PPPGPA+ ++PL P+A + P AP
Sbjct: 556 SPQETVPEFPCTFLPPTPAPTPPRPPPGPATLAPSRPLLVPKAERLSPP---AP------ 606
Query: 251 LTIGSSSEKEIDDVIDEIISLESSYNDEMLSYLPGGTTGLQLPSTLPVSGNLLDVYSSQG 310
S SE+ + LS +PG P TL V
Sbjct: 607 ----SGSERRLSGD---------------LSSMPG-------PGTLSVR----------- 629
Query: 311 VATPAITVSNSCPAELPNIKREISETEAKALLKERQKKDNHNLIERRRRFNINDRIKELG 370
V+ P +S P R I+ A E++RRFNI L
Sbjct: 630 VSPPQPILSRGRPDSNKTENRRITHISA----------------EQKRRFNIKLGFDTLH 673
Query: 371 TLIPK-SSDPEMRWNKGTILKASVDYIRKLQKEQQ-RSKDLESRQRSLEQANRSLQLRIQ 428
L+ S+ P ++ +K T L+ + +YI LQ+E+ ++ + + +E+ N ++ L Q
Sbjct: 674 GLVSTLSAQPSLKVSKATTLQKTAEYILMLQQERAGLQEEAQQLRDEIEELNAAINLCQQ 733
Query: 429 EL 430
+L
Sbjct: 734 QL 735
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 49.7 bits (117), Expect = 7e-06
Identities = 53/164 (32%), Positives = 69/164 (42%), Gaps = 24/164 (14%)
Query: 83 QATPATPATLSASSSAGGSRTPAMSSSSSSRVLLRQQLMRAQAQEQERRERREQAAAAPF 142
Q + A+ A AS S GSR + S L + +AQ Q Q R QAA P
Sbjct: 3707 QPSRASSAYHHASDSKKGSR----QAHSGPAALQSKAEPQAQPQLQGR-----QAAPGPQ 3757
Query: 143 PSPAPASPAISVVGVSAGGHTLSRPPPAQVPREVLKVQTHLENPTRYHLQQARRQQVKQY 202
S +P+S I SR P Q ++ L +Q P + L QAR QQ Q
Sbjct: 3758 QSQSPSSRQIP-------SGAASRQPQTQQQQQGLGLQ-----PPQQALTQARLQQQSQP 3805
Query: 203 LSTTLGPKLASQALTPPPGPASA---QPLPAPEAAHTTGPTGSA 243
+ P + A P PGP++A QP P A T G G+A
Sbjct: 3806 TTRGSAPAASQPAGKPQPGPSTATGPQPAGPPRAEQTNGSKGTA 3849
Score = 33.1 bits (74), Expect = 0.71
Identities = 49/196 (25%), Positives = 74/196 (37%), Gaps = 27/196 (13%)
Query: 75 RSSLPISLQATPATPATLSASSSAGGSRTPAMSSSSSSRVLLR-----QQLMRAQAQEQE 129
R++ P QA+ TP S + ++ PA + R L+ Q+ R+ + +
Sbjct: 90 RAASPTPKQASATTPGHESPRETR--AQGPAGQEADGPRRTLQVDSRTQRSGRSPSVSPD 147
Query: 130 RRERREQAAAAPFPSPAPASPAISVVGVSAGGHTLSRP---PPAQVPREVLKVQTHLENP 186
R + P +P P+S + S T S+P Q +V NP
Sbjct: 148 RGSTPTSPYSVPQIAPLPSSTLCPICKTSDLTSTPSQPNFNTCTQCHNKVCNQCGFNPNP 207
Query: 187 TRYHLQQAR-------RQQVKQYLSTTLGPKLASQ------ALTPPPGPASAQPLPAPEA 233
HL Q + + Q + T P+ SQ AL+P PA QPL P+
Sbjct: 208 ---HLTQVKEWLCLNCQMQRALGMDMTTAPRSKSQQQLHSPALSPAHSPAK-QPLGKPDQ 263
Query: 234 AHTTGPTGSAPNSPMA 249
+ GP G P S A
Sbjct: 264 ERSRGPGGPQPGSRQA 279
Score = 30.8 bits (68), Expect = 3.5
Identities = 47/233 (20%), Positives = 75/233 (32%), Gaps = 35/233 (15%)
Query: 60 DPDSFYELKSQPLPLRSSLPISLQATPATPAT--------------LSASSSAGGSRTPA 105
DP + + P + + P TPAT ++ +S AG R+P+
Sbjct: 1352 DPLKLHSSPASPSSASKEIGMPFSQGPGTPATTAVAPCPAGLPRGYMTPASPAGSERSPS 1411
Query: 106 MSSSSSSRVLLRQQLMRAQAQEQERRERREQAAAAPFPSPAPASPAISVVGVSAGGHTLS 165
SS++ S E + AAA P S + G S
Sbjct: 1412 PSSTAHSYGHSPTTANYGSQTEDLPQAPSGLAAAGRAAREKPLSASDGEGGTPQPSRAYS 1471
Query: 166 RPPPAQVPREVLKVQTHLENPTRYHLQQARRQQVKQYLSTTLGPKLASQALTPPPGPASA 225
+ P L + E+PT + +GP+ ++ T P PA A
Sbjct: 1472 YFASSSPP---LSPSSPSESPT--------------FSPGKMGPRATAEFSTQTPSPAPA 1514
Query: 226 QPLPAPEAAHTTGPT----GSAPNSPMALLTIGSSSEKEIDDVIDEIISLESS 274
+P A T P P+ P + S +E ++ + S SS
Sbjct: 1515 SDMPRSPGAPTPSPMVAQGTQTPHRPSTPRLVWQESSQEAPFMVITLASDASS 1567
>gi|114431248 hypothetical protein LOC205717 [Homo sapiens]
Length = 2245
Score = 48.5 bits (114), Expect = 2e-05
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 332 EISETEAKALLKERQK-KDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNKGTILK 390
E++E E + R+K ++ HN +ER R+ IN I +G LIP S P ++ +K IL
Sbjct: 3 EMTENETPTKKQHRKKNRETHNAVERHRKKKINAGINRIGELIPCS--PALKQSKNMILD 60
Query: 391 ASVDYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQELELQAQ 435
+ YI +L+++ + +L + EQA +LR Q E+Q +
Sbjct: 61 QAFKYITELKRQ---NDELLLNGGNNEQAEEIKKLRKQLEEIQKE 102
>gi|47717116 MAX interactor 1 isoform b [Homo sapiens]
Length = 295
Score = 47.8 bits (112), Expect = 3e-05
Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 36/252 (14%)
Query: 219 PPGPASAQPLPAPEAAHTTGPTGSAPNSPMALL--TIGSSSEKEIDDVIDEI-ISLESSY 275
PP A+ QP PE P G+ P P + + T +S EK I+ + + I LE++
Sbjct: 27 PPAVAAPQPPALPE-----DPAGAKPRCPFSDIFNTSENSMEKHINTFLQNVQILLEAA- 80
Query: 276 NDEMLSYLPGGTTGLQLPSTLPVSGNLLDVYSSQGVATPAITVSNSCPAELPNIKREISE 335
SYL ++ + G Y+S + P+ + +S P + ++ S
Sbjct: 81 -----SYLEQ----IEKENKKCEHG-----YASSFPSMPSPRLQHSKPPRRLSRAQKHSS 126
Query: 336 TEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNKGTILKASVDY 395
+ R HN +E+ RR ++ ++ L LIP D G + KA +
Sbjct: 127 GSSNTSTANRS---THNELEKNRRAHLRLCLERLKVLIPLGPDCTRHTTLGLLNKAKA-H 182
Query: 396 IRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQELELQAQIHGLPVPPTPGLLSLATTSA 455
I+KL++ +++S + + +LE+ R L+ R+++L+ ++ + + S+ +T +
Sbjct: 183 IKKLEEAERKS---QHQLENLEREQRFLKWRLEQLQGPQEMERIRMD------SIGSTIS 233
Query: 456 SDSLKPEQLDIE 467
SD E+ +IE
Sbjct: 234 SDRSDSEREEIE 245
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 47.0 bits (110), Expect = 5e-05
Identities = 51/197 (25%), Positives = 73/197 (37%), Gaps = 19/197 (9%)
Query: 68 KSQPLPLRSSLPISLQA-----TPATPA-TLSASSSAGGSRTPAMSSSSSSRVLLRQQLM 121
K+ P RS+L + TP TP+ ++ S A G+ + S+R +
Sbjct: 146 KATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGP 205
Query: 122 RAQAQEQERRERREQAAAAPFPSPA------PASPAISVVGVSAGGHTLSRPPPAQVPRE 175
R E + AA A PAS ++S S P PR
Sbjct: 206 RKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPR- 264
Query: 176 VLKVQTHLENPTRYHLQQARRQQV---KQYLSTTLGPKLASQALTPPPGPASAQPLPAPE 232
H P LQ R QV ++ + LGP +S TP P A+P+P P+
Sbjct: 265 ---APAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPD 321
Query: 233 AAHTTGPTGSAPNSPMA 249
A T P P+ P+A
Sbjct: 322 NAATPLPATLPPSPPLA 338
Score = 37.0 bits (84), Expect = 0.049
Identities = 34/120 (28%), Positives = 44/120 (36%), Gaps = 6/120 (5%)
Query: 140 APFPSPAPASPAISVVGVSAGGHTLSRPPPAQVPREVLKV-QTHLENPTRYHLQQARRQQ 198
A FP AP SP+ S+ L+ PPP P + Q P LQ RR
Sbjct: 805 ASFPGQAPFSPSASLPM-----SPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPP 859
Query: 199 VKQYLSTTLGPKLASQALTPPPGPASAQPLPAPEAAHTTGPTGSAPNSPMALLTIGSSSE 258
++ GP+L PP P S P G + SA ++P L S E
Sbjct: 860 TPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPE 919
Score = 36.2 bits (82), Expect = 0.084
Identities = 70/282 (24%), Positives = 105/282 (37%), Gaps = 48/282 (17%)
Query: 68 KSQPLPLRSSLPISLQATPATPATLSASSSAGGSRTPAMSSSSSSRVLLRQQLMRAQAQE 127
K++P+P P ATP PATL S A S S+ L Q
Sbjct: 313 KARPVP-----PPDNAATPL-PATLPPSPPLATPLPLAPPSPSAPPSL--------QTLP 358
Query: 128 QERRERREQAAAAPFPSPAPASPAISVVGVSAGGHTLSRP----PPAQVPREVLKVQTHL 183
QA + P A P++ + H+L+ P PP+ + L+ T L
Sbjct: 359 SPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSL 418
Query: 184 ENPTRYHLQQARRQQVKQYLSTTLGPKLASQALTPPPGPASAQP----------LPA-PE 232
+PT Q +L T+ P+ +LT P PAS P LPA P
Sbjct: 419 GSPTL--------QATHSFL--TMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPP 468
Query: 233 AAHTTGPTGSAPNSPM------ALLTIGS-SSEKEIDDVIDEIISLESSYNDEMLSYLPG 285
+ P S +SP+ AL ++ S S + + +I + +SS L P
Sbjct: 469 LQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPA 528
Query: 286 GTTGLQLPSTLPVSGNLLDVYSSQGVATPAITVSNSCPAELP 327
T L + ++ L +S + TP + + CPA P
Sbjct: 529 SLTTPPLENLPSLAPPPLQT-ASAPLTTPHLE-TPPCPAPCP 568
>gi|9945318 MAX binding protein [Homo sapiens]
Length = 582
Score = 47.0 bits (110), Expect = 5e-05
Identities = 73/316 (23%), Positives = 117/316 (37%), Gaps = 49/316 (15%)
Query: 218 PPPGPASAQPLP-APEAAHTTGPTGSAPNSPMALLTIGSSSEKEIDDVIDEIISLESSYN 276
PPP PA+AQPLP AP G G + P L + ++ +
Sbjct: 104 PPPLPAAAQPLPLAPRQPALVGAPGLSIKEPAPLPS------------RPQVPTPAPLLP 151
Query: 277 DEMLSYLPGGTTGLQLPSTLPVSGNLLDVYSSQGVATPAITVSNSCPAELPNIK----RE 332
D + P G+ P PV L + GV P + P L +K E
Sbjct: 152 DSKATIPPNGSPKPLQPLPTPV----LTIAPHPGV-QPQLAPQQPPPPTLGTLKLAPAEE 206
Query: 333 ISETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNKGTILKAS 392
+ +E K ++ HN +E+ RR ++ + + L IP D + + ++L+ +
Sbjct: 207 VKSSEQKKRPGGIGTREVHNKLEKNRRAHLKECFETLKRNIPNVDD--KKTSNLSVLRTA 264
Query: 393 VDYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQEL--ELQAQIHGLPV--------P 442
+ YI+ L++++ K+ E L + + Q R+ EL EL + L +
Sbjct: 265 LRYIQSLKRKE---KEYEHEMERLAREKIATQQRLAELKHELSQWMDVLEIDRVLRQTGQ 321
Query: 443 PTPGLLSLATTSASDSLKPEQLDIEEEG--------RPGAATFHVGGGPAQNAPHQQP-- 492
P S +T S + E ++ + G RP P P P
Sbjct: 322 PEDDQASTSTASEGEDNIDEDMEEDRAGLGPPKLSHRPQPELLKSTLPPPSTTPAPLPPH 381
Query: 493 --PAPPSDALLDLHFP 506
P P S AL H P
Sbjct: 382 PHPHPHSVALPPAHLP 397
Score = 30.8 bits (68), Expect = 3.5
Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 13/112 (11%)
Query: 130 RRERREQAAAAPFPSPAPASPAISVVG------VSAGGHTLSRPPPAQVPREVLKVQTHL 183
++++ +Q P P P PA+PA ++V +AGG + A V++ H+
Sbjct: 399 QQQQPQQKTPLPAPPPPPAAPAQTLVPAPAHLVATAGGGSTVIAHTATTHASVIQTVNHV 458
Query: 184 ENPTRYHLQQARRQQVKQYLSTTLGPKLASQALTPPPGPASAQPLPAPEAAH 235
LQ + + + P + TPP G + P AH
Sbjct: 459 -------LQGPGGKHIAHIAPSAPSPAVQLAPATPPIGHITVHPATLNHVAH 503
>gi|4758010 clock [Homo sapiens]
Length = 846
Score = 45.8 bits (107), Expect = 1e-04
Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 343 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNKGTILKASVDYIRKLQKE 402
K++ K+ + N E++RR N IKELG+++P ++ + +K T+L+ S+D++RK ++
Sbjct: 31 KDKAKRVSRNKSEKKRRDQFNVLIKELGSMLPGNA---RKMDKSTVLQKSIDFLRKHKEI 87
Query: 403 QQRSKDLESRQ 413
+S E RQ
Sbjct: 88 TAQSDASEIRQ 98
>gi|30795240 aryl hydrocarbon receptor nuclear translocator isoform
2 [Homo sapiens]
Length = 328
Score = 45.4 bits (106), Expect = 1e-04
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 334 SETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNKGTILKASV 393
S+ E + KER ++NH+ IERRRR + I EL ++P S + +K TIL+ +V
Sbjct: 77 SDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAV 136
Query: 394 DYIRKLQKEQQRSKD 408
+++ L+ S D
Sbjct: 137 SHMKSLRGTGNTSTD 151
>gi|4502231 aryl hydrocarbon receptor nuclear translocator isoform 1
[Homo sapiens]
Length = 789
Score = 45.4 bits (106), Expect = 1e-04
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 334 SETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNKGTILKASV 393
S+ E + KER ++NH+ IERRRR + I EL ++P S + +K TIL+ +V
Sbjct: 77 SDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAV 136
Query: 394 DYIRKLQKEQQRSKD 408
+++ L+ S D
Sbjct: 137 SHMKSLRGTGNTSTD 151
>gi|5453734 MAD4 [Homo sapiens]
Length = 209
Score = 44.3 bits (103), Expect = 3e-04
Identities = 26/101 (25%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Query: 335 ETEAKALLKER-QKKDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNKGTILKASV 393
+T+A L+++ + +HN +E+ RR + +++L L+P D R ++LK +
Sbjct: 41 KTKAAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPD-STRHTTLSLLKRAK 99
Query: 394 DYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQELELQA 434
+I+KL+++ +R+ ++ + L+Q +R L+ R+++L +Q+
Sbjct: 100 VHIKKLEEQDRRALSIKEQ---LQQEHRFLKRRLEQLSVQS 137
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 43.5 bits (101), Expect = 5e-04
Identities = 70/279 (25%), Positives = 106/279 (37%), Gaps = 38/279 (13%)
Query: 86 PATPATLSASSSAGG---SRTPAMSSSSSSRVLLRQQLMRAQAQEQERRERREQAAAAPF 142
P P L +S G S TPA + SSS + R+Q + Q Q+ +++ Q P
Sbjct: 21 PPPPVALPEASPGPGYSSSTTPA-APSSSGFMSFREQHLAQLQQLQQMHQKQMQCVLQPH 79
Query: 143 PSPAPASPAISVVGVSAGGHTLSRPPPAQVPREVLKVQTHLENPTRYHLQQARRQQVKQY 202
P P P V + GG+ +PPP +P P L ++QQ K
Sbjct: 80 HLPPPPLPPPPV--MPGGGYGDWQPPPPPMP-----------PPPGPALSYQKQQQYKHQ 126
Query: 203 L--STTLGP------KLASQALTPPPGPASAQP-----LPAPEAAHT-TGPTGSAPNSPM 248
+ GP +L S +PP P S P +P P+ + PT S P P
Sbjct: 127 MLHHQRDGPPGLVPMELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPP 186
Query: 249 ALLTIGSSSEKEIDDVIDEIISLESSYNDEMLSYLPGGTTGLQLPSTLPVSGNLLDVYSS 308
A + S + S SS + LS+ Q + P G+ S
Sbjct: 187 AQPSPSQSPPSQSYLAPTPSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGH----SKS 242
Query: 309 QGVATPAITVSNSCPAELPNIKREISETEAKALLKERQK 347
Q +A P ++ P +++E E+ AK E+Q+
Sbjct: 243 QLLAPPP---PSAPPGNKTTVQQEPLESGAKNKSTEQQQ 278
Score = 30.0 bits (66), Expect = 6.0
Identities = 47/195 (24%), Positives = 67/195 (34%), Gaps = 27/195 (13%)
Query: 61 PDSFYELKSQPLPLRSSLPISLQATPATPATLSASSSAGGSRTPAMSSSSSSRVLLRQQL 120
P S+Y P SS P A P+ + + S + + + SSSSS L Q
Sbjct: 171 PPSYY-------PPTSSQPYLPPAQPSPSQSPPSQSYLAPTPSYSSSSSSSQSYLSHSQS 223
Query: 121 MRAQAQEQERR----ERREQAAAAPFPSPAPAS-PAISVVGVSAGGHTLSRPPPAQVPRE 175
+Q R + Q A P PS P + + + +G S P
Sbjct: 224 YLPSSQASPSRPSQGHSKSQLLAPPPPSAPPGNKTTVQQEPLESGAKNKSTEQQQAAPEP 283
Query: 176 VLKVQTHLENPTRYHLQQ--ARRQQVKQYLSTTLGPKLASQALTPPPGPASAQPLPAPEA 233
T E ++ Q + +Q+ K +L G K GP A+ P P
Sbjct: 284 DPSTMTPQEQQQYWYRQHLLSLQQRTKVHLP---GHK---------KGPVVAKDTPEPVK 331
Query: 234 AHTTGP-TGSAPNSP 247
T P T P SP
Sbjct: 332 EEVTVPATSQVPESP 346
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 43.1 bits (100), Expect = 7e-04
Identities = 42/136 (30%), Positives = 54/136 (39%), Gaps = 25/136 (18%)
Query: 117 RQQLMRAQAQEQER----RERREQAAAAPFPSPAPASPAISVVGVSAGGHTLSRPPPAQV 172
RQ+ R + E+E+ RERR +AAAP P + + S G + PA+
Sbjct: 242 RQERERQEQLEREQLEWERERRISSAAAPASVETPLNSVLGDSSASEPG-LQAASQPAET 300
Query: 173 PREVLKVQTHLENPTRYHLQQARRQQVKQYLSTTLGPKLASQALTPPPGPASAQPLPAPE 232
P + V L P L GP AS AL PPPGP PLP
Sbjct: 301 PSQQGIVLGPLAPPPPPPLPP--------------GPAQASVALPPPPGPPPPPPLP--- 343
Query: 233 AAHTTGPTGSAPNSPM 248
+TGP P P+
Sbjct: 344 ---STGPPPPPPPPPL 356
Score = 35.0 bits (79), Expect = 0.19
Identities = 35/175 (20%), Positives = 63/175 (36%), Gaps = 25/175 (14%)
Query: 332 EISETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNKGTILKA 391
E E + L +ERQ+++ +ER+ R +R++ L
Sbjct: 182 ERERLEQEQLERERQERERQERLERQERLERQERLERQERL------------------- 222
Query: 392 SVDYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQELELQAQIHGLPVPPTPGLLSLA 451
R+ Q+ Q+R + LE +R ++ R QL ++LE + + + P +
Sbjct: 223 ----DRERQERQERER-LERLERERQERERQEQLEREQLEWERE-RRISSAAAPASVETP 276
Query: 452 TTSASDSLKPEQLDIEEEGRPGAATFHVGGGPAQNAPHQQPPAPPSDALLDLHFP 506
S + ++ +P G AP PP PP A + P
Sbjct: 277 LNSVLGDSSASEPGLQAASQPAETPSQQGIVLGPLAPPPPPPLPPGPAQASVALP 331
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.127 0.350
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,584,215
Number of Sequences: 37866
Number of extensions: 1426157
Number of successful extensions: 14255
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 741
Number of HSP's that attempted gapping in prelim test: 11330
Number of HSP's gapped (non-prelim): 3366
length of query: 575
length of database: 18,247,518
effective HSP length: 108
effective length of query: 467
effective length of database: 14,157,990
effective search space: 6611781330
effective search space used: 6611781330
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.