Guide to the Human Genome
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Name: RSC1A1 Sequence: fasta or formatted (617aa) NCBI GI: 5730021
Description:

regulatory solute carrier protein, family 1, member 1

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         40           2
 C cysteine            1.9         12           1
 D aspartate           4.9         30           1
 E glutamate           9.4         58           2
 F phenylalanine       1.6         10           1
 G glycine             4.9         30           2
 H histidine           2.9         18           1
 I isoleucine          4.1         25           1
 K lysine              4.7         29           2
 L leucine             9.4         58           2
 M methionine          1.5          9           1
 N asparagine          5.8         36           1
 P proline             6.8         42           2
 Q glutamine           6.3         39           2
 R arginine            3.1         19           1
 S serine             13.1         81           3
 T threonine           6.5         40           1
 V valine              5.5         34           2
 W tryptophan          0.3          2           1
 Y tyrosine            0.8          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   regulatory solute carrier protein, family 1, member 1... 
TPR                   0.011   nuclear pore complex-associated protein TPR 
MYH15                 0.011   myosin, heavy polypeptide 15 
ANKRD26               0.010   ankyrin repeat domain 26 
C12orf35              0.010   hypothetical protein LOC55196 
LOC653125             0.009   PREDICTED: similar to Golgin subfamily A member 8-l...
GPR128                0.008   G protein-coupled receptor 128 
FOXP2                 0.008   forkhead box P2 isoform I 
FOXP2                 0.008   forkhead box P2 isoform III 
FOXP2                 0.008   forkhead box P2 isoform II 
LOC100134147          0.008   PREDICTED: hypothetical protein 
SFRS2IP               0.008   splicing factor, arginine/serine-rich 2, interactin...
LOC728498             0.008   PREDICTED: similar to Golgin subfamily A member 8-l...
DSPP                  0.008   dentin sialophosphoprotein preproprotein 
PDE4DIP               0.008   phosphodiesterase 4D interacting protein isoform 2 [...
PDE4DIP               0.008   phosphodiesterase 4D interacting protein isoform 5 [...
PDE4DIP               0.008   phosphodiesterase 4D interacting protein isoform 1 ...
VCAN                  0.007   versican isoform 1 
GNAS                  0.007   GNAS complex locus NESP55 
LOC100128719          0.007   PREDICTED: hypothetical protein, partial 
LOC100128719          0.007   PREDICTED: hypothetical protein, partial 
NUP155                0.007   nucleoporin 155kDa isoform 2 
NUP155                0.007   nucleoporin 155kDa isoform 1 
ZFYVE9                0.007   zinc finger, FYVE domain containing 9 isoform 1 [Hom...
ZFYVE9                0.007   zinc finger, FYVE domain containing 9 isoform 3 [Hom...
ZFYVE9                0.007   zinc finger, FYVE domain containing 9 isoform 2 [Homo...
ZNF267                0.007   zinc finger protein 267 
KIF13B                0.007   kinesin family member 13B 
MUC16                 0.007   mucin 16 
LOC653720             0.007   PREDICTED: similar to Golgin subfamily A member 8-l...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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