LOC100290235 19960

Name: LOC100290235	Sequence: fasta or formatted (111aa)		NCBI GI: 239749357
Description: PREDICTED: hypothetical protein XP_002347009		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 1.8 2 1 C cysteine 7.2 8 2 D aspartate 2.7 3 1 E glutamate 8.1 9 1 F phenylalanine 6.3 7 2 G glycine 8.1 9 2 H histidine 3.6 4 1 I isoleucine 6.3 7 1 K lysine 9.9 11 2 L leucine 8.1 9 1 M methionine 0.9 1 1 N asparagine 3.6 4 1 P proline 4.5 5 1 Q glutamine 2.7 3 1 R arginine 7.2 8 1 S serine 9.0 10 1 T threonine 6.3 7 2 V valine 0.9 1 1 W tryptophan 2.7 3 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002347009 LOC100133128 0.417 PREDICTED: hypothetical protein LOC100133128 0.417 PREDICTED: hypothetical protein LOC100133128 0.417 PREDICTED: hypothetical protein DEFB108B 0.413 beta-defensin 108B DEFB125 0.037 defensin, beta 125 preproprotein DEFB116 0.037 beta-defensin 116 DEFB124 0.037 beta-defensin 124 ZNF217 0.032 zinc finger protein 217 SPAG11B 0.028 sperm associated antigen 11B isoform C preproprotein... DEFB104A 0.028 defensin, beta 104A precursor DEFB104B 0.028 defensin, beta 104B precursor DEFB110 0.023 beta-defensin 110 LOC100288255 0.023 PREDICTED: hypothetical protein XP_002343930 FRG2 0.023 FSHD region gene 2 FRG2B 0.023 FSHD region gene 2 family, member B DEFB111 0.018 beta-defensin 111 DEFB118 0.018 beta-defensin 118 BCAP29 0.014 B-cell receptor-associated protein BAP29 isoform a [... BCAP29 0.014 B-cell receptor-associated protein BAP29 isoform b [... DEFB106A 0.014 defensin, beta 106A precursor DEFB119 0.014 defensin, beta 119 isoform c precursor DEFB106B 0.014 defensin, beta 106B precursor HSPG2 0.014 heparan sulfate proteoglycan 2 LOC100131973 0.014 PREDICTED: hypothetical protein DEFB105A 0.009 defensin, beta 105A precursor DEFB123 0.009 defensin, beta 123 precursor DEFB105B 0.009 defensin, beta 105B precursor RNF170 0.009 ring finger protein 170 isoform b LOC651959 0.009 PREDICTED: FSHD region gene 2-like Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.