Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 82546879
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|82546879 GTP binding protein 1 [Homo sapiens]
(669 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|82546879 GTP binding protein 1 [Homo sapiens] 1330 0.0
gi|45593140 GTP binding protein 2 [Homo sapiens] 505 e-143
gi|34147630 Tu translation elongation factor, mitochondrial prec... 92 2e-18
gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform... 82 1e-15
gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1... 82 1e-15
gi|4503475 eukaryotic translation elongation factor 1 alpha 2 [H... 81 4e-15
gi|4503471 eukaryotic translation elongation factor 1 alpha 1 [H... 79 1e-14
gi|194018522 G1 to S phase transition 1 isoform 3 [Homo sapiens] 75 3e-13
gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens] 75 3e-13
gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens] 75 3e-13
gi|46094014 peptide chain release factor 3 [Homo sapiens] 68 3e-11
gi|239757543 PREDICTED: similar to eukaryotic translation elonga... 65 2e-10
gi|54607086 eukaryotic elongation factor, selenocysteine-tRNA-sp... 59 2e-08
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 50 9e-06
gi|115334682 SNAP25-interacting protein [Homo sapiens] 39 0.016
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 37 0.045
gi|239745342 PREDICTED: hypothetical protein XP_002343430 [Homo ... 36 0.13
gi|169204521 PREDICTED: hypothetical protein [Homo sapiens] 35 0.17
gi|169205149 PREDICTED: hypothetical protein [Homo sapiens] 35 0.17
gi|169204400 PREDICTED: hypothetical protein [Homo sapiens] 35 0.17
gi|197276602 microtubule-associated protein 4 isoform 5 [Homo sa... 35 0.22
gi|47519675 microtubule-associated protein 4 isoform 2 [Homo sap... 35 0.22
gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sap... 35 0.22
gi|88196790 coiled-coil domain containing 88 [Homo sapiens] 35 0.29
gi|32479527 potassium voltage-gated channel, KQT-like subfamily,... 34 0.38
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 34 0.38
gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens] 34 0.50
gi|20070376 solute carrier family 38, member 10 isoform b [Homo ... 34 0.50
gi|239757444 PREDICTED: similar to hCG2019076 [Homo sapiens] 33 1.1
gi|239757043 PREDICTED: functional smad suppressing element 18 [... 33 1.1
>gi|82546879 GTP binding protein 1 [Homo sapiens]
Length = 669
Score = 1330 bits (3442), Expect = 0.0
Identities = 669/669 (100%), Positives = 669/669 (100%)
Query: 1 MATERSRSAMDSPVPASMFAPEPSSPGAARAAAAAARLHGGFDSDCSEDGEALNGEPELD 60
MATERSRSAMDSPVPASMFAPEPSSPGAARAAAAAARLHGGFDSDCSEDGEALNGEPELD
Sbjct: 1 MATERSRSAMDSPVPASMFAPEPSSPGAARAAAAAARLHGGFDSDCSEDGEALNGEPELD 60
Query: 61 LTSKLVLVSPTSEQYDSLLRQMWERMDEGCGETIYVIGQGSDGTEYGLSEADMEASYATV 120
LTSKLVLVSPTSEQYDSLLRQMWERMDEGCGETIYVIGQGSDGTEYGLSEADMEASYATV
Sbjct: 61 LTSKLVLVSPTSEQYDSLLRQMWERMDEGCGETIYVIGQGSDGTEYGLSEADMEASYATV 120
Query: 121 KSMAEQIEADVILLRERQEAGGRVRDYLVRKRVGDNDFLEVRVAVVGNVDAGKSTLLGVL 180
KSMAEQIEADVILLRERQEAGGRVRDYLVRKRVGDNDFLEVRVAVVGNVDAGKSTLLGVL
Sbjct: 121 KSMAEQIEADVILLRERQEAGGRVRDYLVRKRVGDNDFLEVRVAVVGNVDAGKSTLLGVL 180
Query: 181 THGELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKI 240
THGELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKI
Sbjct: 181 THGELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKI 240
Query: 241 CEKSTKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALN 300
CEKSTKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALN
Sbjct: 241 CEKSTKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALN 300
Query: 301 VPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQSKDDVIVTASNFSSERMC 360
VPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQSKDDVIVTASNFSSERMC
Sbjct: 301 VPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQSKDDVIVTASNFSSERMC 360
Query: 361 PIFQISNVTGENLDLLKMFLNLLSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGL 420
PIFQISNVTGENLDLLKMFLNLLSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGL
Sbjct: 361 PIFQISNVTGENLDLLKMFLNLLSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGL 420
Query: 421 IKLNDTLLLGPDPLGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMV 480
IKLNDTLLLGPDPLGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMV
Sbjct: 421 IKLNDTLLLGPDPLGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMV 480
Query: 481 SPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGDKATV 540
SPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGDKATV
Sbjct: 481 SPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGDKATV 540
Query: 541 HFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLLQTTNNSPMNSKPQQIKMQSTKKGPLT 600
HFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLLQTTNNSPMNSKPQQIKMQSTKKGPLT
Sbjct: 541 HFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLLQTTNNSPMNSKPQQIKMQSTKKGPLT 600
Query: 601 KRDEGGPSGGPAVGAPPPGDEASSVGAGQPAASSNLQPQPKPSSGGRRRGGQRHKVKSQG 660
KRDEGGPSGGPAVGAPPPGDEASSVGAGQPAASSNLQPQPKPSSGGRRRGGQRHKVKSQG
Sbjct: 601 KRDEGGPSGGPAVGAPPPGDEASSVGAGQPAASSNLQPQPKPSSGGRRRGGQRHKVKSQG 660
Query: 661 ACVTPASGC 669
ACVTPASGC
Sbjct: 661 ACVTPASGC 669
>gi|45593140 GTP binding protein 2 [Homo sapiens]
Length = 602
Score = 505 bits (1300), Expect = e-143
Identities = 279/582 (47%), Positives = 377/582 (64%), Gaps = 34/582 (5%)
Query: 26 PGAARAAAAAARLHG-GFDSDCS-EDGEALNGE-------------PELD---LTSKLVL 67
PG A + G G S C G+ NG PE + + KL L
Sbjct: 15 PGGGPAVGGTLKARGAGSSSGCGGPKGKKKNGRNRGGKANNPPYLPPEAEDGNIEYKLKL 74
Query: 68 VSPTSEQYDSLLRQMWERMDEGCGETIYVIGQGSDGTEYGLSEADMEASYATVKSMAEQI 127
V+P+ +++ L+ QM R+ EG GE +Y IG +G GL+E +M AS T+ MAE++
Sbjct: 75 VNPSQYRFEHLVTQMKWRLQEGRGEAVYQIGVEDNGLLVGLAEEEMRASLKTLHRMAEKV 134
Query: 128 EADVILLRERQ-----EAGGRVRDYLVRKRVGDNDFLEVRVAVVGNVDAGKSTLLGVLTH 182
AD+ +LRER+ + ++ + LVRK + FL++RVAV+GNVD+GKSTLLGVLT
Sbjct: 135 GADITVLREREVDYDSDMPRKITEVLVRKVPDNQQFLDLRVAVLGNVDSGKSTLLGVLTQ 194
Query: 183 GELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKICE 242
GELDNGRG AR LFRH HEI+SGRTSS+ +ILGF+S+G VVN DS +ICE
Sbjct: 195 GELDNGRGRARLNLFRHLHEIQSGRTSSISFEILGFNSKGEVVNYSDSRTAE----EICE 250
Query: 243 KSTKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVP 302
S+K+ITFIDLAGH KYL TT+FG+T + PD +L+V +N GI G T+EHLGLALAL VP
Sbjct: 251 SSSKMITFIDLAGHHKYLHTTIFGLTSYCPDCALLLVSANTGIAGTTREHLGLALALKVP 310
Query: 303 VFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQSKDDVIVTASNFS-SERMCP 361
F+VV+KID+C ++ T++ L+R+LK PGC K+P+LV S+DD + A F+ S + P
Sbjct: 311 FFIVVSKIDLCAKTTVERTVRQLERVLKQPGCHKVPMLVTSEDDAVTAAQQFAQSPNVTP 370
Query: 362 IFQISNVTGENLDLLKMFLNLLSPRTSYREEEP-----AEFQIDDTYSVPGVGTVVSGTT 416
IF +S+V+GE+LDLLK+FLN+L P T+ +E+E EFQ+D+ Y+VP VGTVV GT
Sbjct: 371 IFTLSSVSGESLDLLKVFLNILPPLTNSKEQEELMQQLTEFQVDEIYTVPEVGTVVGGTL 430
Query: 417 LRGLIKLNDTLLLGPDPLGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKG 476
G+ + D L++GP G FL + V SI R R + +R GQ A+ AL R+ +RKG
Sbjct: 431 SSGICREGDQLVVGPTDDGCFLELRVCSIQRNRSACRVLRAGQAATLALGDFDRALLRKG 490
Query: 477 MVMVSPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMD-KDCLRTG 535
MVMVSP +NP FEAEI++L H TT +Q VH G++RQTA + + KD LRTG
Sbjct: 491 MVMVSPEMNPTICSVFEAEIVLLFHATTFRRGFQVTVHVGNVRQTAVVEKIHAKDKLRTG 550
Query: 536 DKATVHFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLLQTT 577
+KA V FRF+K PEYL + +L+FREG TK +G +T + T
Sbjct: 551 EKAVVRFRFLKHPEYLKVGAKLLFREGVTKGIGHVTDVQAIT 592
>gi|34147630 Tu translation elongation factor, mitochondrial
precursor [Homo sapiens]
Length = 455
Score = 91.7 bits (226), Expect = 2e-18
Identities = 112/439 (25%), Positives = 186/439 (42%), Gaps = 55/439 (12%)
Query: 151 KRVGDNDFLEVRVAVVGNVDAGKSTLLGVLTHGELDNGRGFARQKLFRHKHEIESGRTSS 210
K+ D V V +G+VD GK+TL +T + G F+ EI++
Sbjct: 51 KKTYVRDKPHVNVGTIGHVDHGKTTLTAAITKILAEGGGA-----KFKKYEEIDNAPEER 105
Query: 211 VGNDILGFDSEGNVVNKPDSHGGSLEWTKICEKSTKVITFIDLAGHEKYLKTTVFGMTGH 270
+ G +N +E++ + + D GH Y+K + TG
Sbjct: 106 ---------ARGITIN-----AAHVEYST----AARHYAHTDCPGHADYVKNMI---TGT 144
Query: 271 LP-DFCMLMVGSNAGIVGMTKEHLGLALALNVP-VFVVVTKIDMCPANILQETLKL-LQR 327
P D C+L+V +N G + T+EHL LA + V V V V K D + + E ++L ++
Sbjct: 145 APLDGCILVVAANDGPMPQTREHLLLARQIGVEHVVVYVNKADAVQDSEMVELVELEIRE 204
Query: 328 LLKSPGCRKIPVLVQSKDDVIVTASNFSSERMCPIFQISNVTGENLDLLKMFLNLLSPRT 387
LL G + + VIV ++ + E P + +V + LD + ++ P
Sbjct: 205 LLTEFGYKG------EETPVIVGSALCALEGRDPELGLKSVQ-KLLDAVDTYI----PVP 253
Query: 388 SYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTL-LLGPDPLGNFLSIAVKSIH 446
+ E+P ++ YSVPG GTVV+GT RG++K D LLG + ++ H
Sbjct: 254 ARDLEKPFLLPVEAVYSVPGRGTVVTGTLERGILKKGDECELLGHSKNIRTVVTGIEMFH 313
Query: 447 RKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSP-RLNPQASWEFEAEILVL------ 499
+ ++ G ++ +KR +R+G+VMV P + P + EA++ +L
Sbjct: 314 KS---LERAEAGDNLGALVRGLKREDLRRGLVMVKPGSIKPHQ--KVEAQVYILSKEEGG 368
Query: 500 HHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGDKATVHFRFIKTPEYLHIDQRLVF 559
H +S M IL +K+ G+ + ++ P L QR
Sbjct: 369 RHKPFVSHFMPVMFSLTWDMACRIILPPEKELAMPGEDLKFNL-ILRQPMILEKGQRFTL 427
Query: 560 REG-RTKAVGTITKLLQTT 577
R+G RT G +T L T
Sbjct: 428 RDGNRTIGTGLVTNTLAMT 446
>gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform 2
[Homo sapiens]
Length = 642
Score = 82.4 bits (202), Expect = 1e-15
Identities = 102/396 (25%), Positives = 160/396 (40%), Gaps = 53/396 (13%)
Query: 149 VRKRVGDNDFLEVRVAVVGNVDAGKSTLLGVLTH--GELDNGRGFARQKLFRHKHEIESG 206
+ KR G L + V+G+VDAGKSTL+G + + G ++ K HK+E ES
Sbjct: 209 LEKRQGGKQLLNL--VVIGHVDAGKSTLMGHMLYLLGNIN--------KRTMHKYEQESK 258
Query: 207 RTSSVGN------DILGFDSEGNVVNKPDSHGGSLEWTKICEKSTKVITFIDLAGHEKYL 260
+ D G + E V + TK E +TKVIT +D GH+ ++
Sbjct: 259 KAGKASFAYAWVLDETGEERERGVTM-------DVGMTKF-ETTTKVITLMDAPGHKDFI 310
Query: 261 KTTVFGMTGHLPDFCMLMVGSNAGIV-------GMTKEHLGLALALNVP-VFVVVTKIDM 312
+ G D +L+V ++ G G T+EH L +L V + V V K+D
Sbjct: 311 PNMITGAAQ--ADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQ 368
Query: 313 C--PANILQETLKLLQRLLKSPGCRKIPVLVQSKDDVIVTASNFSSERMCPIFQISNVTG 370
QE L LK G ++ D + S S E + Q S +T
Sbjct: 369 VNWQQERFQEITGKLGHFLKQAGFKE-------SDVGFIPTSGLSGENLITRSQSSELTK 421
Query: 371 --ENLDLLKMFLNLLSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLL 428
+ L LL+ + P+ S ++P + D + G G ++G G I+ D LL
Sbjct: 422 WYKGLCLLEQIDSFKPPQRSI--DKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLL 479
Query: 429 LGPDPLGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLNPQA 488
P + VK I PV G S L + I G + P++ +A
Sbjct: 480 AMPPNE----TCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKA 535
Query: 489 SWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATI 524
F A IL+ + I+ + ++H ++ + A I
Sbjct: 536 CTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVI 571
>gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1
[Homo sapiens]
Length = 684
Score = 82.4 bits (202), Expect = 1e-15
Identities = 102/396 (25%), Positives = 160/396 (40%), Gaps = 53/396 (13%)
Query: 149 VRKRVGDNDFLEVRVAVVGNVDAGKSTLLGVLTH--GELDNGRGFARQKLFRHKHEIESG 206
+ KR G L + V+G+VDAGKSTL+G + + G ++ K HK+E ES
Sbjct: 251 LEKRQGGKQLLNL--VVIGHVDAGKSTLMGHMLYLLGNIN--------KRTMHKYEQESK 300
Query: 207 RTSSVGN------DILGFDSEGNVVNKPDSHGGSLEWTKICEKSTKVITFIDLAGHEKYL 260
+ D G + E V + TK E +TKVIT +D GH+ ++
Sbjct: 301 KAGKASFAYAWVLDETGEERERGVTM-------DVGMTKF-ETTTKVITLMDAPGHKDFI 352
Query: 261 KTTVFGMTGHLPDFCMLMVGSNAGIV-------GMTKEHLGLALALNVP-VFVVVTKIDM 312
+ G D +L+V ++ G G T+EH L +L V + V V K+D
Sbjct: 353 PNMITGAAQ--ADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQ 410
Query: 313 C--PANILQETLKLLQRLLKSPGCRKIPVLVQSKDDVIVTASNFSSERMCPIFQISNVTG 370
QE L LK G ++ D + S S E + Q S +T
Sbjct: 411 VNWQQERFQEITGKLGHFLKQAGFKE-------SDVGFIPTSGLSGENLITRSQSSELTK 463
Query: 371 --ENLDLLKMFLNLLSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLL 428
+ L LL+ + P+ S ++P + D + G G ++G G I+ D LL
Sbjct: 464 WYKGLCLLEQIDSFKPPQRSI--DKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLL 521
Query: 429 LGPDPLGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLNPQA 488
P + VK I PV G S L + I G + P++ +A
Sbjct: 522 AMPPNE----TCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKA 577
Query: 489 SWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATI 524
F A IL+ + I+ + ++H ++ + A I
Sbjct: 578 CTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVI 613
>gi|4503475 eukaryotic translation elongation factor 1 alpha 2 [Homo
sapiens]
Length = 463
Score = 80.9 bits (198), Expect = 4e-15
Identities = 87/376 (23%), Positives = 163/376 (43%), Gaps = 41/376 (10%)
Query: 161 VRVAVVGNVDAGKSTLLGVLTH--GELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGF 218
+ + V+G+VD+GKST G L + G +D K K E E+ + +G +
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKCGGID--------KRTIEKFEKEA---AEMGKGSFKY 56
Query: 219 DSEGNVVNKPDSHGGSLEWTKICEKSTKV-ITFIDLAGHEKYLKTTVFGMTGHLPDFCML 277
+ + G +++ + ++TK IT ID GH ++K + G + D +L
Sbjct: 57 AWVLDKLKAERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQ--ADCAVL 114
Query: 278 MVGSNAGIV-------GMTKEHLGLALALNVPVFVV-VTKIDMC-PA-------NILQET 321
+V + G G T+EH LA L V +V V K+D PA I++E
Sbjct: 115 IVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEV 174
Query: 322 LKLLQRLLKSPGCRK-IPVLVQSKDDVIVTASNFSSERMCPIFQISNVTGENLDLLKMFL 380
++++ +P +P+ D+++ + N + + + + LL+
Sbjct: 175 SAYIKKIGYNPATVPFVPISGWHGDNMLEPSPNMPWFKGWKV-ERKEGNASGVSLLEALD 233
Query: 381 NLLSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDPLGNFLSI 440
+L P ++P + D Y + G+GTV G G+++ + P + +
Sbjct: 234 TILPPTRP--TDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNI----TT 287
Query: 441 AVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLNP-QASWEFEAEILVL 499
VKS+ + E G F +K + IR+G V + +P Q + +F +++++L
Sbjct: 288 EVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIIL 347
Query: 500 HHPTTISPRYQAMVHC 515
+HP IS Y ++ C
Sbjct: 348 NHPGQISAGYSPVIDC 363
>gi|4503471 eukaryotic translation elongation factor 1 alpha 1 [Homo
sapiens]
Length = 462
Score = 79.3 bits (194), Expect = 1e-14
Identities = 98/423 (23%), Positives = 176/423 (41%), Gaps = 56/423 (13%)
Query: 161 VRVAVVGNVDAGKSTLLGVLTH--GELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGF 218
+ + V+G+VD+GKST G L + G +D K K E E+ + +G +
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKCGGID--------KRTIEKFEKEA---AEMGKGSFKY 56
Query: 219 DSEGNVVNKPDSHGGSLE---WTKICEKSTKVITFIDLAGHEKYLKTTVFGMTGHLPDFC 275
+ + G +++ W E S +T ID GH ++K + G + D
Sbjct: 57 AWVLDKLKAERERGITIDISLWK--FETSKYYVTIIDAPGHRDFIKNMITGTSQ--ADCA 112
Query: 276 MLMVGSNAGIV-------GMTKEHLGLALALNVPVFVV-VTKIDMCPANILQ----ETLK 323
+L+V + G G T+EH LA L V +V V K+D Q E +K
Sbjct: 113 VLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVK 172
Query: 324 LLQRLLKSPGCRK-----IPVLVQSKDDVIVTASNFSSERMCPIFQISNVTGEN-----L 373
+ +K G +P+ + D+++ ++N P F+ VT ++
Sbjct: 173 EVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSANM------PWFKGWKVTRKDGNASGT 226
Query: 374 DLLKMFLNLLSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDP 433
LL+ +L P ++P + D Y + G+GTV G G++K + P
Sbjct: 227 TLLEALDCILPPTRP--TDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVN 284
Query: 434 LGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLN-PQASWEF 492
++ VKS+ + E G F +K + +R+G V + + P + F
Sbjct: 285 ----VTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGF 340
Query: 493 EAEILVLHHPTTISPRYQAMVHCGSIRQTATILSM-DKDCLRTGDKATVHFRFIKTPEYL 551
A++++L+HP IS Y ++ C + + +K R+G K +F+K+ +
Sbjct: 341 TAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAA 400
Query: 552 HID 554
+D
Sbjct: 401 IVD 403
>gi|194018522 G1 to S phase transition 1 isoform 3 [Homo sapiens]
Length = 499
Score = 74.7 bits (182), Expect = 3e-13
Identities = 113/471 (23%), Positives = 187/471 (39%), Gaps = 88/471 (18%)
Query: 161 VRVAVVGNVDAGKSTLLGVLTH--GELDNGRGFARQKLFRHKHEI-ESGRTSSVGNDILG 217
V V +G+VDAGKST+ G + + G +D ++ L +++ E E R + + L
Sbjct: 75 VNVVFIGHVDAGKSTIGGQIMYLTGMVD------KRTLEKYEREAKEKNRETWYLSWALD 128
Query: 218 FDSEGNVVNKPDSHGGSLEWTKICEKSTKVITFIDLAGHEKYLKTTVFGMTGHLPDFCML 277
+ E K G + E K T +D GH+ ++ + G + D +L
Sbjct: 129 TNQEERDKGKTVEVGRA-----YFETEKKHFTILDAPGHKSFVPNMIGGAS--QADLAVL 181
Query: 278 MVGSNAGIV-------GMTKEHLGLALALNVP-VFVVVTKIDMCPANILQETLKLLQRLL 329
++ + G G T+EH LA V + V++ K+D N E + + L
Sbjct: 182 VISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKL 241
Query: 330 KSPGCRKIPVLVQSKDDVIVTASNFSSERMCPIFQISNVTGENL----DLLKMFLNL--- 382
P +K+ F+ ++ S +TG NL D ++ L
Sbjct: 242 -VPFLKKV---------------GFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFI 285
Query: 383 ----LSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDPLGNFL 438
P + + P I D Y +GTVV G G I L++ P N
Sbjct: 286 PYLDNLPNFNRSVDGPIRLPIVDKYK--DMGTVVLGKLESGSICKGQQLVMMP----NKH 339
Query: 439 SIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLNPQASWEFEAEILV 498
++ V I + V G+ LK I+ I G ++ P + F+A+I++
Sbjct: 340 NVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVI 399
Query: 499 LHHPTTISPRYQAMVHCGS----IRQTATILSMDKDCLRTGDKATVHFRFIKTPEYLHID 554
+ H + I P Y A++H + + TA I +DK ++G+K+ RF+K D
Sbjct: 400 IEHKSIICPGYNAVLHIHTCIEEVEITALICLVDK---KSGEKSKTRPRFVKQ------D 450
Query: 555 QRLVFREGRTKAVGTITKLLQTTNNSPMNSKPQQIKMQSTKKGPLTKRDEG 605
Q + R + GTI L+T + P + G T RDEG
Sbjct: 451 QVCI---ARLRTAGTI--CLETFKDFP-------------QMGRFTLRDEG 483
>gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens]
Length = 636
Score = 74.7 bits (182), Expect = 3e-13
Identities = 113/471 (23%), Positives = 187/471 (39%), Gaps = 88/471 (18%)
Query: 161 VRVAVVGNVDAGKSTLLGVLTH--GELDNGRGFARQKLFRHKHEI-ESGRTSSVGNDILG 217
V V +G+VDAGKST+ G + + G +D ++ L +++ E E R + + L
Sbjct: 212 VNVVFIGHVDAGKSTIGGQIMYLTGMVD------KRTLEKYEREAKEKNRETWYLSWALD 265
Query: 218 FDSEGNVVNKPDSHGGSLEWTKICEKSTKVITFIDLAGHEKYLKTTVFGMTGHLPDFCML 277
+ E K G + E K T +D GH+ ++ + G + D +L
Sbjct: 266 TNQEERDKGKTVEVGRA-----YFETEKKHFTILDAPGHKSFVPNMIGGAS--QADLAVL 318
Query: 278 MVGSNAGIV-------GMTKEHLGLALALNVP-VFVVVTKIDMCPANILQETLKLLQRLL 329
++ + G G T+EH LA V + V++ K+D N E + + L
Sbjct: 319 VISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKL 378
Query: 330 KSPGCRKIPVLVQSKDDVIVTASNFSSERMCPIFQISNVTGENL----DLLKMFLNL--- 382
P +K+ F+ ++ S +TG NL D ++ L
Sbjct: 379 -VPFLKKV---------------GFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFI 422
Query: 383 ----LSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDPLGNFL 438
P + + P I D Y +GTVV G G I L++ P N
Sbjct: 423 PYLDNLPNFNRSVDGPIRLPIVDKYK--DMGTVVLGKLESGSICKGQQLVMMP----NKH 476
Query: 439 SIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLNPQASWEFEAEILV 498
++ V I + V G+ LK I+ I G ++ P + F+A+I++
Sbjct: 477 NVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVI 536
Query: 499 LHHPTTISPRYQAMVHCGS----IRQTATILSMDKDCLRTGDKATVHFRFIKTPEYLHID 554
+ H + I P Y A++H + + TA I +DK ++G+K+ RF+K D
Sbjct: 537 IEHKSIICPGYNAVLHIHTCIEEVEITALICLVDK---KSGEKSKTRPRFVKQ------D 587
Query: 555 QRLVFREGRTKAVGTITKLLQTTNNSPMNSKPQQIKMQSTKKGPLTKRDEG 605
Q + R + GTI L+T + P + G T RDEG
Sbjct: 588 QVCI---ARLRTAGTI--CLETFKDFP-------------QMGRFTLRDEG 620
>gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens]
Length = 637
Score = 74.7 bits (182), Expect = 3e-13
Identities = 113/471 (23%), Positives = 187/471 (39%), Gaps = 88/471 (18%)
Query: 161 VRVAVVGNVDAGKSTLLGVLTH--GELDNGRGFARQKLFRHKHEI-ESGRTSSVGNDILG 217
V V +G+VDAGKST+ G + + G +D ++ L +++ E E R + + L
Sbjct: 213 VNVVFIGHVDAGKSTIGGQIMYLTGMVD------KRTLEKYEREAKEKNRETWYLSWALD 266
Query: 218 FDSEGNVVNKPDSHGGSLEWTKICEKSTKVITFIDLAGHEKYLKTTVFGMTGHLPDFCML 277
+ E K G + E K T +D GH+ ++ + G + D +L
Sbjct: 267 TNQEERDKGKTVEVGRA-----YFETEKKHFTILDAPGHKSFVPNMIGGAS--QADLAVL 319
Query: 278 MVGSNAGIV-------GMTKEHLGLALALNVP-VFVVVTKIDMCPANILQETLKLLQRLL 329
++ + G G T+EH LA V + V++ K+D N E + + L
Sbjct: 320 VISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKL 379
Query: 330 KSPGCRKIPVLVQSKDDVIVTASNFSSERMCPIFQISNVTGENL----DLLKMFLNL--- 382
P +K+ F+ ++ S +TG NL D ++ L
Sbjct: 380 -VPFLKKV---------------GFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFI 423
Query: 383 ----LSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDPLGNFL 438
P + + P I D Y +GTVV G G I L++ P N
Sbjct: 424 PYLDNLPNFNRSVDGPIRLPIVDKYK--DMGTVVLGKLESGSICKGQQLVMMP----NKH 477
Query: 439 SIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLNPQASWEFEAEILV 498
++ V I + V G+ LK I+ I G ++ P + F+A+I++
Sbjct: 478 NVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVI 537
Query: 499 LHHPTTISPRYQAMVHCGS----IRQTATILSMDKDCLRTGDKATVHFRFIKTPEYLHID 554
+ H + I P Y A++H + + TA I +DK ++G+K+ RF+K D
Sbjct: 538 IEHKSIICPGYNAVLHIHTCIEEVEITALICLVDK---KSGEKSKTRPRFVKQ------D 588
Query: 555 QRLVFREGRTKAVGTITKLLQTTNNSPMNSKPQQIKMQSTKKGPLTKRDEG 605
Q + R + GTI L+T + P + G T RDEG
Sbjct: 589 QVCI---ARLRTAGTI--CLETFKDFP-------------QMGRFTLRDEG 621
>gi|46094014 peptide chain release factor 3 [Homo sapiens]
Length = 628
Score = 67.8 bits (164), Expect = 3e-11
Identities = 112/485 (23%), Positives = 180/485 (37%), Gaps = 116/485 (23%)
Query: 161 VRVAVVGNVDAGKST-------LLGVLTHGELDNGRGFARQK----------LFRHKHEI 203
V V +G+VDAGKST L G++ L+ A++K L ++ E
Sbjct: 204 VNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEER 263
Query: 204 ESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKICEKSTKVITFIDLAGHEKYLKTT 263
+ G+T VG E K T +D GH+ ++
Sbjct: 264 DKGKTVEVGRAYF-------------------------ETERKHFTILDAPGHKSFVPNM 298
Query: 264 VFGMTGHLPDFCMLMVGSNAGIV-------GMTKEHLGLALALNVP-VFVVVTKIDMCPA 315
+ G + D +L++ + G G T+EH LA V + V++ K+D
Sbjct: 299 IGGAS--QADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTV 356
Query: 316 NILQETLKLLQRLLKSPGCRKIPVLVQSKDDVIVTASNFSSERMCPIFQISNVTGENL-- 373
N E + + L P +K+ FS ++ S +TG N+
Sbjct: 357 NWSIERYEECKEKL-VPFLKKV---------------GFSPKKDIHFMPCSGLTGANIKE 400
Query: 374 --DLLKMFLNL-------LSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLN 424
D + L P + + P I D Y +GTVV G G I
Sbjct: 401 QSDFCPWYTGLPFIPYLDNLPNFNRSIDGPIRLPIVDKYK--DMGTVVLGKLESGSIFKG 458
Query: 425 DTLLLGPDPLGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRL 484
L++ P N ++ V I V G+ LK I+ I G ++ P
Sbjct: 459 QQLVMMP----NKHNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDPSN 514
Query: 485 NPQASWEFEAEILVLHHPTTISPRYQAMVHCGS----IRQTATILSMDKDCLRTGDKATV 540
+ F+ +I+++ H + I P Y A++H + + TA I +DK ++G+K+
Sbjct: 515 LCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDK---KSGEKSKT 571
Query: 541 HFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLLQTTNNSPMNSKPQQIKMQSTKKGPLT 600
RF+K DQ + R + GTI L+T + P + G T
Sbjct: 572 RPRFVKQ------DQVCI---ARLRTAGTI--CLETFKDFP-------------QMGRFT 607
Query: 601 KRDEG 605
RDEG
Sbjct: 608 LRDEG 612
>gi|239757543 PREDICTED: similar to eukaryotic translation
elongation factor 1 alpha 2 [Homo sapiens]
Length = 444
Score = 65.1 bits (157), Expect = 2e-10
Identities = 86/377 (22%), Positives = 156/377 (41%), Gaps = 49/377 (12%)
Query: 161 VRVAVVGNVDAGKSTLLGVLTH--GELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGF 218
+ + V+G+VD+GKST G L + G +D K K E E+ + +G +
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKCGGID--------KRTIEKFEKEA---AEMGKGSFKY 56
Query: 219 DSEGNVVNKPDSHGGSLEWTKICEKSTKV-ITFIDLAGHEKYLKTTVFGMTGHLPDFCML 277
+ + G +++ + ++TK IT ID GH ++K + G + D +L
Sbjct: 57 AWVLDKLKAERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQ--ADCAVL 114
Query: 278 MVGSNAGIV-------GMTKEHLGLALALNVPVFVV-VTKIDMC-PA-------NILQET 321
+V + G G T+EH LA L V +V V K+D PA I++E
Sbjct: 115 IVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEV 174
Query: 322 LKLLQRLLKSPGCRK-IPVLVQSKDDVIVTASNFSSERMCPIFQIS-NVTGENLDLLKMF 379
++++ +P +P+ D+++ + N + + + N +G L
Sbjct: 175 SAYIKKIGYNPATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERKEGNASGXRL------ 228
Query: 380 LNLLSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDPLGNFLS 439
PR S G+GTV G G+++ + P + +
Sbjct: 229 ----CPRISCPSIPSGPTFPSHPLPSAGIGTVPVGRVETGILRPGMVVTFAPVNI----T 280
Query: 440 IAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLNP-QASWEFEAEILV 498
VKS+ + E G F +K + IR+G V + +P Q + +F +++++
Sbjct: 281 TEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVII 340
Query: 499 LHHPTTISPRYQAMVHC 515
L+HP IS Y ++ C
Sbjct: 341 LNHPGQISAGYSPVIDC 357
>gi|54607086 eukaryotic elongation factor,
selenocysteine-tRNA-specific [Homo sapiens]
Length = 596
Score = 58.5 bits (140), Expect = 2e-08
Identities = 73/331 (22%), Positives = 132/331 (39%), Gaps = 30/331 (9%)
Query: 159 LEVRVAVVGNVDAGKSTLLGVLTHGELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGF 218
+ V V V+G++D+GK+ L L+ + F +Q R E G T +G
Sbjct: 6 VNVNVGVLGHIDSGKTALARALS--TTASTAAFDKQPQSR-----ERGITLDLGFSCFSV 58
Query: 219 DSEGNVVNKPDSHGGSLEWTKICEKSTKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLM 278
+ + + E + +T +D GH ++T + G + D ML+
Sbjct: 59 PLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGG--AQIIDLMMLV 116
Query: 279 VGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANILQETL----KLLQRLLKSPGC 334
+ G+ + E L + + VV+ KID+ P Q + K +Q+ L++
Sbjct: 117 IDVTKGMQTQSAECLVIGQIACQKLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKF 176
Query: 335 RKIPVLVQSKDDVIVTASNFSSERMCPIFQISNVTGENLDLLKMFLNLLSPRTSYREEEP 394
R P++ V A E P + E ++LL +++ + S P
Sbjct: 177 RGAPIIP-------VAAKPGGPE--APETEAPQGIPELIELLTSQISIPTRDPS----GP 223
Query: 395 AEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDPLGNFLSIAVKSIHRKRMPVKE 454
+D +S+ G GTV++GT L G I L D++ + P + VKS+ MP+
Sbjct: 224 FLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEI---PALKVVK-KVKSMQMFHMPITS 279
Query: 455 VRGGQTASFALKKIKRSSIRKGMVMVSPRLN 485
G + + + +G+V L+
Sbjct: 280 AMQGDRLGICVTQFDPKLLERGLVCAPESLH 310
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 49.7 bits (117), Expect = 9e-06
Identities = 79/359 (22%), Positives = 145/359 (40%), Gaps = 54/359 (15%)
Query: 99 QGSDGTEYGLSEADMEASYATV-----KSMAEQIEADVILLRERQE-AGGRVRDYLVRKR 152
+GS+G E +D + S T+ K M+ E D R ++E A + + + ++R
Sbjct: 558 EGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYDSDDDRTKEERAYDKAKRRIEKRR 617
Query: 153 VGDNDFLEVR------VAVVGNVDAGKSTLLGVLTHGELDNGR-GFARQKLFRHKHEIES 205
+ + + + V+G+VD GK+ +L L H + +G G Q++ +E+
Sbjct: 618 LEHSKNVNTEKLRAPIICVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPLEA 677
Query: 206 GRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKICEKSTKVITFIDLAGHEKYLKTTVF 265
+ I FD E V P + ID GHE +
Sbjct: 678 INEQT--KMIKNFDREN--VRIPG------------------MLIIDTPGHESFSNLRNR 715
Query: 266 GMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMC------PANILQ 319
G + L D +L+V G+ T E + L + P V + KID P + +
Sbjct: 716 GSS--LCDIAILVVDIMHGLEPQTIESINLLKSKKCPFIVALNKIDRLYDWKKSPDSDVA 773
Query: 320 ETLKLLQRLLKSPGCRKIPVLV----QSKDDVIVTASNFSSERMCPIFQISNVTGENLD- 374
TLK ++ K + ++ Q + + N + S TG+ +
Sbjct: 774 ATLKKQKKNTKDEFEERAKAIIVEFAQQGLNAALFYENKDPRTFVSLVPTSAHTGDGMGS 833
Query: 375 ----LLKMFLNLLSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLL 429
L+++ +LS R ++ EE A Q+ + ++PG+GT + + G +K DT+++
Sbjct: 834 LIYLLVELTQTMLSKRLAHCEELRA--QVMEVKALPGMGTTIDVILINGRLKEGDTIIV 890
>gi|115334682 SNAP25-interacting protein [Homo sapiens]
Length = 1183
Score = 38.9 bits (89), Expect = 0.016
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 561 EGRTKAVGTITKLLQTT--NNSPMNSKPQQIKMQSTKKGPLTKRDEGGPSGG--PAVGAP 616
E K + ++T L+Q+ S + ++I+ + P GG S G P G P
Sbjct: 571 EAMEKQIASLTGLVQSALLRGSEPETPSEKIEGSNGAATPSAPCGSGGRSSGATPVSGPP 630
Query: 617 PPGDEASSVGAGQPAASSNLQPQ 639
PP ASS AGQP A S LQ Q
Sbjct: 631 PPS--ASSTPAGQPTAVSRLQMQ 651
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 37.4 bits (85), Expect = 0.045
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 7/58 (12%)
Query: 597 GPLTKRDEGGPSGGPAVGAPPPGDEASSVGAGQPAASSNLQPQPKPSSGGRRRGGQRH 654
GP GGP GG G P P G G ++ P+P GG RGG++H
Sbjct: 197 GPKQGPGPGGPKGGKMPGGPKP-------GGGPGLSTPGGHPKPPHRGGGEPRGGRQH 247
Score = 29.6 bits (65), Expect = 9.4
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 593 STKKGPLTKRDEGGPSG-GPA-VGAPPPGDEASSVGAGQPAASSNLQPQPKPSSGG 646
S+ P T G P G GP PPP ++ GA P S+ P P +GG
Sbjct: 128 SSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGG 183
>gi|239745342 PREDICTED: hypothetical protein XP_002343430 [Homo
sapiens]
Length = 230
Score = 35.8 bits (81), Expect = 0.13
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 597 GPLTKRDEGGPSGGPAVG-APPPGDEASSVGAG----QPAASSNLQPQPKPSSGGRRRGG 651
G LT R G P P+ G APPPG + VG G PA + L P + GRRR
Sbjct: 60 GSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSPAPGAGLTRGPL-APLGRRRHA 118
Query: 652 QRHKVKSQGACVTP 665
R + + GA + P
Sbjct: 119 PRWEPAAAGALLGP 132
>gi|169204521 PREDICTED: hypothetical protein [Homo sapiens]
Length = 430
Score = 35.4 bits (80), Expect = 0.17
Identities = 33/115 (28%), Positives = 47/115 (40%), Gaps = 28/115 (24%)
Query: 574 LQTTNNSPMNSKPQQIKMQSTKKGPLTKRDEGGPSGGPAVGAPPPGDEASSVGA-GQPAA 632
LQ T + + P + + K +R GGP G A GA G EA++ G A
Sbjct: 253 LQGTAAGRVRADPDDASLSTDKP----QRGTGGPLGPAAAGA---GTEAAAAHEEGSKAG 305
Query: 633 SSNLQPQ------PKPSSGGRRRGGQ--------------RHKVKSQGACVTPAS 667
S +P+ P PS G RR GG+ RH+V++ A P +
Sbjct: 306 DSGAEPRGLAPHGPHPSCGERRPGGRWQQRRRSHEGRARGRHRVEADAADAAPTA 360
>gi|169205149 PREDICTED: hypothetical protein [Homo sapiens]
Length = 430
Score = 35.4 bits (80), Expect = 0.17
Identities = 33/115 (28%), Positives = 47/115 (40%), Gaps = 28/115 (24%)
Query: 574 LQTTNNSPMNSKPQQIKMQSTKKGPLTKRDEGGPSGGPAVGAPPPGDEASSVGA-GQPAA 632
LQ T + + P + + K +R GGP G A GA G EA++ G A
Sbjct: 253 LQGTAAGRVRADPDDASLSTDKP----QRGTGGPLGPAAAGA---GTEAAAAHEEGSKAG 305
Query: 633 SSNLQPQ------PKPSSGGRRRGGQ--------------RHKVKSQGACVTPAS 667
S +P+ P PS G RR GG+ RH+V++ A P +
Sbjct: 306 DSGAEPRGLAPHGPHPSCGERRPGGRWQQRRRSHEGRARGRHRVEADAADAAPTA 360
>gi|169204400 PREDICTED: hypothetical protein [Homo sapiens]
Length = 430
Score = 35.4 bits (80), Expect = 0.17
Identities = 33/115 (28%), Positives = 47/115 (40%), Gaps = 28/115 (24%)
Query: 574 LQTTNNSPMNSKPQQIKMQSTKKGPLTKRDEGGPSGGPAVGAPPPGDEASSVGA-GQPAA 632
LQ T + + P + + K +R GGP G A GA G EA++ G A
Sbjct: 253 LQGTAAGRVRADPDDASLSTDKP----QRGTGGPLGPAAAGA---GTEAAAAHEEGSKAG 305
Query: 633 SSNLQPQ------PKPSSGGRRRGGQ--------------RHKVKSQGACVTPAS 667
S +P+ P PS G RR GG+ RH+V++ A P +
Sbjct: 306 DSGAEPRGLAPHGPHPSCGERRPGGRWQQRRRSHEGRARGRHRVEADAADAAPTA 360
>gi|197276602 microtubule-associated protein 4 isoform 5 [Homo
sapiens]
Length = 817
Score = 35.0 bits (79), Expect = 0.22
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 602 RDEGGPSGGPAVGAPPPGDEAS----SVGAGQPAASSNLQPQPKPSSGGRRRGGQ 652
+ EGG S P PP G+E + + AG P ++S L P S GG +R Q
Sbjct: 753 KTEGGGSEAPLCPGPPAGEEPAISEAAPEAGAPTSASGLNGHPTLSGGGDQREAQ 807
>gi|47519675 microtubule-associated protein 4 isoform 2 [Homo
sapiens]
Length = 887
Score = 35.0 bits (79), Expect = 0.22
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 602 RDEGGPSGGPAVGAPPPGDEAS----SVGAGQPAASSNLQPQPKPSSGGRRRGGQ 652
+ EGG S P PP G+E + + AG P ++S L P S GG +R Q
Sbjct: 822 KTEGGGSEAPLCPGPPAGEEPAISEAAPEAGAPTSASGLNGHPTLSGGGDQREAQ 876
>gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sapiens]
Length = 1152
Score = 35.0 bits (79), Expect = 0.22
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 602 RDEGGPSGGPAVGAPPPGDEAS----SVGAGQPAASSNLQPQPKPSSGGRRRGGQ 652
+ EGG S P PP G+E + + AG P ++S L P S GG +R Q
Sbjct: 1087 KTEGGGSEAPLCPGPPAGEEPAISEAAPEAGAPTSASGLNGHPTLSGGGDQREAQ 1141
>gi|88196790 coiled-coil domain containing 88 [Homo sapiens]
Length = 1476
Score = 34.7 bits (78), Expect = 0.29
Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 26/133 (19%)
Query: 543 RFIKTPEYLH------IDQRLVFREGRTKAVGTITKLLQTTNNSPMNSKPQQIKMQSTKK 596
R +++ ++LH +DQ R + K V I + P+ + + K
Sbjct: 1262 RSLESRDHLHREQREYLDQLNALRREKQKLVEKIMDQYRVLEPVPLPRTKKGSWLADKVK 1321
Query: 597 GPLTKRDEGGPSGGPAVGAP----------------PPGDEASSVGAGQPA----ASSNL 636
+ R EGGP GG +GA P G EA G+ PA A S+L
Sbjct: 1322 RLMRPRREGGPPGGLRLGADGAGSTESLGGPPETELPEGREADGTGSPSPAPMRRAQSSL 1381
Query: 637 QPQPKPSSGGRRR 649
+ + +GG+RR
Sbjct: 1382 CLRDETLAGGQRR 1394
>gi|32479527 potassium voltage-gated channel, KQT-like subfamily,
member 1 isoform 1 [Homo sapiens]
Length = 676
Score = 34.3 bits (77), Expect = 0.38
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 604 EGGPSGGP-----AVGAPPPGDEASSVGAGQPAASSNLQPQPKPS 643
EGGP+GG A GAP P AS P +S+L P+P S
Sbjct: 42 EGGPAGGALYAPIAPGAPGPAPPASPAAPAAPPVASDLGPRPPVS 86
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 34.3 bits (77), Expect = 0.38
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 11/66 (16%)
Query: 593 STKKGPL--TKRDEGGPSGGPAVGAPPPGDEASSVGAGQPAASSNLQPQPKPSSGG---- 646
ST+ GPL T+ G PSG A+ PP S+ G+ QP+ASS+ Q +SGG
Sbjct: 826 STRPGPLPTTQYSPGPPSGATAL--PPTSAAPSAQGSPQPSASSSSQ---FSTSGGPWAR 880
Query: 647 RRRGGQ 652
RR G+
Sbjct: 881 ERRAGE 886
>gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens]
Length = 340
Score = 33.9 bits (76), Expect = 0.50
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Query: 594 TKKGPLTKRDEGGPSGGPAVGAPPPG-DEASSVGAGQPAASSNLQPQPKPSSGGRRRGGQ 652
T+ P +R E P A APPP DE G + SS P + G +
Sbjct: 99 TRAAPGPRRSEDEPPAASASAAPPPQRDEEEPDGVPEKGKSSG--PSARKGKGQIEKRKL 156
Query: 653 RHKVKSQGACVTPASGC 669
R K +S G PA+ C
Sbjct: 157 REKRRSTGVVNIPAAEC 173
>gi|20070376 solute carrier family 38, member 10 isoform b [Homo
sapiens]
Length = 780
Score = 33.9 bits (76), Expect = 0.50
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 20/90 (22%)
Query: 599 LTKRDEGGPSGG--PAVGAPPPGDEASSVG---------------AGQPAASSNLQPQPK 641
L+++ G GG A G PPPG+ A G A +PA L P+P+
Sbjct: 611 LSEQQNGLAVGGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPR 670
Query: 642 PSSGGRRRGGQRHKVKSQG---ACVTPASG 668
R GG + + +G A PASG
Sbjct: 671 EQRDVERAGGNQAASQLEGKASALQPPASG 700
>gi|239757444 PREDICTED: similar to hCG2019076 [Homo sapiens]
Length = 231
Score = 32.7 bits (73), Expect = 1.1
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 5/64 (7%)
Query: 607 PSGGPAVGAPPPGDEASSVGAGQPAASSNLQPQPKP-----SSGGRRRGGQRHKVKSQGA 661
P P V PG + G G AA++ + P SS R GG R QGA
Sbjct: 49 PQRAPPVPGASPGSLGAGTGGGVSAATAPYLSRALPAATFLSSQRRWGGGDRIGGSDQGA 108
Query: 662 CVTP 665
C TP
Sbjct: 109 CATP 112
>gi|239757043 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 996
Score = 32.7 bits (73), Expect = 1.1
Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 18/90 (20%)
Query: 580 SPMNSKPQQIKMQSTKKGP------------LTKRDEGGPSGGPAVGAPPPGDEASSVGA 627
+P +P Q+ GP L + GG G + G+ PP D ++ GA
Sbjct: 526 APPPGQPPQVVANGPGSGPPPPAGGAGSRDALFESPPGGSGGDCSAGSTPPADSVAAAGA 585
Query: 628 GQPAASSNLQPQPKPSS------GGRRRGG 651
G AA S P+ GR+ GG
Sbjct: 586 GAAAAGSGPAGSRVPAPHHPHLLEGRKAGG 615
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,167,118
Number of Sequences: 37866
Number of extensions: 1388676
Number of successful extensions: 8360
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 142
Number of HSP's that attempted gapping in prelim test: 7938
Number of HSP's gapped (non-prelim): 498
length of query: 669
length of database: 18,247,518
effective HSP length: 109
effective length of query: 560
effective length of database: 14,120,124
effective search space: 7907269440
effective search space used: 7907269440
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.