Guide to the Human Genome
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Search of human proteins with 78486540

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|78486540 DDB1 and CUL4 associated factor 15 [Homo sapiens]
         (600 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|78486540 DDB1 and CUL4 associated factor 15 [Homo sapiens]        1234   0.0  
gi|155030232 proline, glutamic acid and leucine rich protein 1 [...    44   6e-04
gi|156071470 hyperpolarization activated cyclic nucleotide-gated...    42   0.002
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     42   0.002
gi|62000702 diacylglycerol kinase kappa [Homo sapiens]                 41   0.003
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    41   0.004
gi|14043024 BCL2-associated athanogene 3 [Homo sapiens]                40   0.005
gi|41281821 SH2 domain containing 3C isoform a [Homo sapiens]          40   0.005
gi|42821110 hypothetical protein LOC340602 [Homo sapiens]              40   0.006
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap...    40   0.008
gi|215820635 protein phosphatase 1, regulatory subunit 13 like [...    39   0.010
gi|63003907 protein phosphatase 1, regulatory subunit 13 like [H...    39   0.010
gi|147902746 MEX3A protein [Homo sapiens]                              39   0.014
gi|224177469 SET domain, bifurcated 1 isoform 2 [Homo sapiens]         39   0.018
gi|224177467 SET domain, bifurcated 1 isoform 1 [Homo sapiens]         39   0.018
gi|145309324 FH2 domain containing 1 [Homo sapiens]                    39   0.018
gi|112734870 hypothetical protein LOC57648 [Homo sapiens]              39   0.018
gi|27502386 nuclear factor of activated T-cells, cytosolic compo...    38   0.023
gi|157785645 SPEG complex locus [Homo sapiens]                         38   0.023
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo...    38   0.030
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo...    38   0.030
gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo sap...    38   0.030
gi|189491742 ataxin 7 isoform b [Homo sapiens]                         37   0.040
gi|4506797 ataxin 7 isoform a [Homo sapiens]                           37   0.040
gi|79750944 ubiquitin specific peptidase 42 [Homo sapiens]             37   0.040
gi|28875786 FCH and double SH3 domains 1 [Homo sapiens]                37   0.040
gi|90903231 huntingtin [Homo sapiens]                                  37   0.052
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]        37   0.052
gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]            37   0.052
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap...    37   0.068

>gi|78486540 DDB1 and CUL4 associated factor 15 [Homo sapiens]
          Length = 600

 Score = 1234 bits (3194), Expect = 0.0
 Identities = 600/600 (100%), Positives = 600/600 (100%)

Query: 1   MAPSSKSERNSGAGSGGGGPGGAGGKRAAGRRREHVLKQLERVKISGQLSPRLFRKLPPR 60
           MAPSSKSERNSGAGSGGGGPGGAGGKRAAGRRREHVLKQLERVKISGQLSPRLFRKLPPR
Sbjct: 1   MAPSSKSERNSGAGSGGGGPGGAGGKRAAGRRREHVLKQLERVKISGQLSPRLFRKLPPR 60

Query: 61  VCVSLKNIVDEDFLYAGHIFLGFSKCGRYVLSYTSSSGDDDFSFYIYHLYWWEFNVHSKL 120
           VCVSLKNIVDEDFLYAGHIFLGFSKCGRYVLSYTSSSGDDDFSFYIYHLYWWEFNVHSKL
Sbjct: 61  VCVSLKNIVDEDFLYAGHIFLGFSKCGRYVLSYTSSSGDDDFSFYIYHLYWWEFNVHSKL 120

Query: 121 KLVRQVRLFQDEEIYSDLYLTVCEWPSDASKVIVFGFNTRSANGMLMNMMMMSDENHRDI 180
           KLVRQVRLFQDEEIYSDLYLTVCEWPSDASKVIVFGFNTRSANGMLMNMMMMSDENHRDI
Sbjct: 121 KLVRQVRLFQDEEIYSDLYLTVCEWPSDASKVIVFGFNTRSANGMLMNMMMMSDENHRDI 180

Query: 181 YVSTVAVPPPGRCAACQDASRAHPGDPNAQCLRHGFMLHTKYQVVYPFPTFQPAFQLKKD 240
           YVSTVAVPPPGRCAACQDASRAHPGDPNAQCLRHGFMLHTKYQVVYPFPTFQPAFQLKKD
Sbjct: 181 YVSTVAVPPPGRCAACQDASRAHPGDPNAQCLRHGFMLHTKYQVVYPFPTFQPAFQLKKD 240

Query: 241 QVVLLNTSYSLVACAVSVHSAGDRSFCQILYDHSTCPLAPASPPEPQSPELPPALPSFCP 300
           QVVLLNTSYSLVACAVSVHSAGDRSFCQILYDHSTCPLAPASPPEPQSPELPPALPSFCP
Sbjct: 241 QVVLLNTSYSLVACAVSVHSAGDRSFCQILYDHSTCPLAPASPPEPQSPELPPALPSFCP 300

Query: 301 EAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPALCPGPSGSRCRAHSE 360
           EAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPALCPGPSGSRCRAHSE
Sbjct: 301 EAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPALCPGPSGSRCRAHSE 360

Query: 361 PLALCGETAPRDSPPASEAPASEPGYVNYTKLYYVLESGEGTEPEDELEDDKISLPFVVT 420
           PLALCGETAPRDSPPASEAPASEPGYVNYTKLYYVLESGEGTEPEDELEDDKISLPFVVT
Sbjct: 361 PLALCGETAPRDSPPASEAPASEPGYVNYTKLYYVLESGEGTEPEDELEDDKISLPFVVT 420

Query: 421 DLRGRNLRPMRERTAVQGQYLTVEQLTLDFEYVINEVIRHDATWGHQFCSFSDYDIVILE 480
           DLRGRNLRPMRERTAVQGQYLTVEQLTLDFEYVINEVIRHDATWGHQFCSFSDYDIVILE
Sbjct: 421 DLRGRNLRPMRERTAVQGQYLTVEQLTLDFEYVINEVIRHDATWGHQFCSFSDYDIVILE 480

Query: 481 VCPETNQVLINIGLLLLAFPSPTEEGQLRPKTYHTSLKVAWDLNTGIFETVSVGDLTEVK 540
           VCPETNQVLINIGLLLLAFPSPTEEGQLRPKTYHTSLKVAWDLNTGIFETVSVGDLTEVK
Sbjct: 481 VCPETNQVLINIGLLLLAFPSPTEEGQLRPKTYHTSLKVAWDLNTGIFETVSVGDLTEVK 540

Query: 541 GQTSGSVWSSYRKSCVDMVMKWLVPESSGRYVNRMTNEALHKGCSLKVLADSERYTWIVL 600
           GQTSGSVWSSYRKSCVDMVMKWLVPESSGRYVNRMTNEALHKGCSLKVLADSERYTWIVL
Sbjct: 541 GQTSGSVWSSYRKSCVDMVMKWLVPESSGRYVNRMTNEALHKGCSLKVLADSERYTWIVL 600


>gi|155030232 proline, glutamic acid and leucine rich protein 1
           [Homo sapiens]
          Length = 1130

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 44/151 (29%), Positives = 57/151 (37%), Gaps = 25/151 (16%)

Query: 275 TCPL-APASPPEPQSP------ELPPALPSF--CPEAAPARSSG---SPEPSPAIAKAKE 322
           TCP  AP  PPE  SP        P  +PS    P A P  S+G   S  P P+      
Sbjct: 644 TCPTPAPVPPPEAPSPFRAPPFHPPGPMPSVGSMPSAGPMPSAGPMPSAGPVPSARPGPP 703

Query: 323 FVADIFRRAKEAKGGVPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASE--AP 380
             A+    +      VP    P L PGP   R  ++ +P+     T P   PP       
Sbjct: 704 TTANHLGLSVPGLVSVP----PRLLPGPENHRAGSNEDPILAPSGTPPPTIPPDETFGGR 759

Query: 381 ASEPGYVNYTKLYYVLESGEGTEPEDELEDD 411
              P +V+Y K        E ++ E  LE D
Sbjct: 760 VPRPAFVHYDK-------EEASDVEISLESD 783



 Score = 35.8 bits (81), Expect = 0.12
 Identities = 38/133 (28%), Positives = 50/133 (37%), Gaps = 32/133 (24%)

Query: 286  PQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPA 345
            P  P LPPALP   P  +P +    PEP P +      + ++     E + G   +  P 
Sbjct: 977  PPPPTLPPALP---PPESPPKVQPEPEPEPGL------LLEVEEPGTEEERGA--DTAPT 1025

Query: 346  LCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEPGYVNYTKLYYVLESGEGTEPE 405
            L P    S+     E     GE +P   PP  E    EP             S   T  E
Sbjct: 1026 LAPEALPSQGEVERE-----GE-SPAAGPPPQELVEEEP-------------SAPPTLLE 1066

Query: 406  DELED--DKISLP 416
            +E ED  DK+  P
Sbjct: 1067 EETEDGSDKVQPP 1079


>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 2 [Homo sapiens]
          Length = 889

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 34/113 (30%), Positives = 41/113 (36%), Gaps = 20/113 (17%)

Query: 277 PLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKG 336
           P  P +PP+ Q P  PP  P   P  AP +     E  P  A               A  
Sbjct: 24  PPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEA---------------ADE 68

Query: 337 GVPE---EARPALC--PGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEP 384
           G P     +R + C  PG  G+   A   P   CG   P+ SP   E PA  P
Sbjct: 69  GGPRGRLRSRDSSCGRPGTPGAASTAKGSPNGECGRGEPQCSPAGPEGPARGP 121



 Score = 32.3 bits (72), Expect = 1.3
 Identities = 34/134 (25%), Positives = 47/134 (35%), Gaps = 16/134 (11%)

Query: 251 LVACAVSVHSAGDRSFCQILYDHSTCPLAPASPPEPQSPELPPALPSFCPEAAPARSSGS 310
           + +   ++  A   SFC  +      PLA  SP   + P   PA  +  P   P  S   
Sbjct: 723 VTSAIATLQQAAAMSFCPQVARPLVGPLALGSPRLVRRPPPGPAPAAASPGPPPPASPPG 782

Query: 311 PEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPALCPGPSGSRCRAHSEPLALCGETAP 370
              SP   +   +            GG+P  A P   P     R    S PL+    + P
Sbjct: 783 APASPRAPRTSPY------------GGLP--AAPLAGPALPARRLSRASRPLSASQPSLP 828

Query: 371 RDS--PPASEAPAS 382
             +  P AS  PAS
Sbjct: 829 HGAPGPAASTRPAS 842


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 14/110 (12%)

Query: 279 APASPPEPQSPELPPA-----LPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKE 333
           A A+PP   +P  PPA      P+  P AA A ++  P P PA    +       +RA  
Sbjct: 123 AAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRA------QRAAP 176

Query: 334 AKGGVPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASE 383
                P  A P     P+G R    + P A+     P   PP   AP  +
Sbjct: 177 LAAPPPAPAAPPAVAPPAGPR---RAPPPAVAAREPPLPPPPQPPAPPQQ 223



 Score = 34.7 bits (78), Expect = 0.26
 Identities = 34/113 (30%), Positives = 41/113 (36%), Gaps = 15/113 (13%)

Query: 283 PPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADI----FRRAKEAKGGV 338
           P    +P  PP  P   P AA A    +P P+PA       VA        RA  A    
Sbjct: 102 PRRGATPPAPPRAPRGAPAAAAA---AAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATA 158

Query: 339 PEEARPALCPGPSGSRCR-------AHSEPLALCGETAPRDSPPASEAPASEP 384
           P    PA  PGP   R         A + P A+     PR +PP + A    P
Sbjct: 159 PPSPGPAQ-PGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPP 210



 Score = 33.1 bits (74), Expect = 0.75
 Identities = 35/137 (25%), Positives = 48/137 (35%), Gaps = 8/137 (5%)

Query: 277 PLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKG 336
           P  P  P  PQ  + PP  P   PE    R+ G+  P       +          +  +G
Sbjct: 212 PPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARPVSLREVVRYLGGSGGAGGRLTRG 271

Query: 337 ---GVPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEPGYVNYTKLY 393
              G+ EE   A      G   R     LAL     P  +PPA+ A  S        ++ 
Sbjct: 272 RVQGLLEEEAAA-----RGRLERTRLGALALPRGDRPGRAPPAASARPSRSKRGGEERVL 326

Query: 394 YVLESGEGTEPEDELED 410
              E  +  E EDE +D
Sbjct: 327 EKEEEEDDDEDEDEEDD 343


>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
          Length = 1271

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 35/111 (31%), Positives = 39/111 (35%), Gaps = 31/111 (27%)

Query: 280 PASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVP 339
           PA  PEP  P  PP  P   P A P  S  SPEP P                        
Sbjct: 20  PAESPEPPPPWPPPPPPPAPPPAPPLLSEASPEPIP------------------------ 55

Query: 340 EEARPALCPGP-----SGSRCRAHSEPL-ALCGETAPRDSPPASEAPASEP 384
            E  P L PGP     S S    ++EP      E A   +P  +  PA EP
Sbjct: 56  -EPCPELAPGPCPEATSESATELYTEPTPEPATEPASEPAPEPATEPAPEP 105



 Score = 36.2 bits (82), Expect = 0.089
 Identities = 31/105 (29%), Positives = 40/105 (38%), Gaps = 17/105 (16%)

Query: 279 APASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGV 338
           AP   PEP    +P   P   PE AP   +  P P P    A EF  +            
Sbjct: 122 APEPTPEPALESVPEPAPELTPEVAP-ELAPEPTPEPVTELAPEFCPE-----------A 169

Query: 339 PEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSP-PASEAPAS 382
             E RP+  P P   +C   +    L  +T+P  SP P+   P S
Sbjct: 170 APEFRPS--PAPCLLQCPVDTRERGL--KTSPSPSPSPSPRTPMS 210



 Score = 35.0 bits (79), Expect = 0.20
 Identities = 31/111 (27%), Positives = 38/111 (34%), Gaps = 12/111 (10%)

Query: 277 PLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPE--PSPAIAKAKEFVADIFRRAKEA 334
           P  P  PP P  P  PP L    PE  P      PE  P P      E   +++      
Sbjct: 28  PPWPPPPPPPAPPPAPPLLSEASPEPIP---EPCPELAPGPCPEATSESATELYTEP--- 81

Query: 335 KGGVPEEA-RPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEP 384
               PE A  PA  P P  +   A         E AP  +  ++  P  EP
Sbjct: 82  ---TPEPATEPASEPAPEPATEPAPEPATEPAPEPAPEPATESAPEPTPEP 129



 Score = 33.9 bits (76), Expect = 0.44
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 3/43 (6%)

Query: 275 TCPLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAI 317
           T  +AP   PEP    +    P FCPEAAP      P P+P +
Sbjct: 142 TPEVAPELAPEPTPEPVTELAPEFCPEAAP---EFRPSPAPCL 181



 Score = 30.0 bits (66), Expect = 6.3
 Identities = 29/106 (27%), Positives = 39/106 (36%), Gaps = 20/106 (18%)

Query: 280 PASPPEPQSPELPPALPSFCPEAAPA---RSSGSPEPSPAIAKAKEFVADIFRRAKEAKG 336
           PAS P P+    P   P+  P   PA    +  +PEP+P  A              E   
Sbjct: 89  PASEPAPEPATEPAPEPATEPAPEPAPEPATESAPEPTPEPA---------LESVPEPAP 139

Query: 337 GVPEEARPALCPGPSGSRCRAHSEPLA-LCGETAPRDSPPASEAPA 381
            +  E  P L P P+        EP+  L  E  P  +P    +PA
Sbjct: 140 ELTPEVAPELAPEPT-------PEPVTELAPEFCPEAAPEFRPSPA 178


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 53/192 (27%), Positives = 74/192 (38%), Gaps = 32/192 (16%)

Query: 277  PLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKG 336
            PL P   P P +    P L S  PE  P    G   PSP      +F        K    
Sbjct: 3093 PLGPEERPPPAADASEPRLASVLPEVKPKVEEGGRHPSPC-----QFT---IATPKVEPA 3144

Query: 337  GVPEEARPALCPGPS--GSR-CRAHSEPLALCGETAPRDS------PPA---SEAPASEP 384
                     L PG S  GSR  R  + P +  G TA + S      PPA   + +P S P
Sbjct: 3145 PAANSLGLGLKPGQSMMGSRDTRMGTGPFSSSGHTAEKASFGATGGPPAHLLTPSPLSGP 3204

Query: 385  GYVNYTKLYYVLESGEGTEP------EDELEDDKIS-----LPFVVTDLRGRNLRPMRER 433
            G  +  +  + LESG  T P       DEL+  + S     LP ++ DL     + ++++
Sbjct: 3205 GGSSLLE-KFELESGALTLPGGPAASGDELDKMESSLVASELPLLIEDLLEHEKKELQKK 3263

Query: 434  TAVQGQYLTVEQ 445
              +  Q    +Q
Sbjct: 3264 QQLSAQLQPAQQ 3275



 Score = 38.5 bits (88), Expect = 0.018
 Identities = 36/118 (30%), Positives = 47/118 (39%), Gaps = 17/118 (14%)

Query: 279 APASPPEPQSPELPP--ALPSFCPEAA------PARSSGSPEPSPAIAKAKEFVADIFRR 330
           +P SPP  +SP  PP   LP+  P  A      P  S  SP P  +        + +F  
Sbjct: 543 SPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPP 602

Query: 331 AKEAKGGVPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEPGYVN 388
            +E+    P E  P L P P  SR     E   +        SPP  E+P S P  V+
Sbjct: 603 FEESPLSPPPEESP-LSPPPEASRLSPPPEDSPM--------SPPPEESPMSPPPEVS 651



 Score = 36.2 bits (82), Expect = 0.089
 Identities = 37/108 (34%), Positives = 46/108 (42%), Gaps = 17/108 (15%)

Query: 279 APASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGV 338
           +P SPP  +SP  PP      PEA  +R S  PE  PA    +     + R  +E+    
Sbjct: 447 SPLSPPPEESPTSPP------PEA--SRLSPPPEELPASPLPE--ALHLSRPLEESPLSP 496

Query: 339 PEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSP--PASEAPASEP 384
           P E  P L P P  S       PL     + P +SP  PA E P S P
Sbjct: 497 PPEESP-LSPPPESS----PFSPLEESPLSPPEESPPSPALETPLSPP 539



 Score = 35.8 bits (81), Expect = 0.12
 Identities = 30/108 (27%), Positives = 39/108 (36%), Gaps = 9/108 (8%)

Query: 277 PLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKG 336
           PL+P  PPE      PP      P    + +S  PE SPA    ++ +  +     E   
Sbjct: 670 PLSP--PPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSL---PLEESP 724

Query: 337 GVPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEP 384
            +P    P LCP   G     H  P       +PR   P     A EP
Sbjct: 725 LLPLPEEPQLCPRSEG----PHLSPRPEEPHLSPRPEEPHLSPQAEEP 768



 Score = 33.1 bits (74), Expect = 0.75
 Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 26/124 (20%)

Query: 278  LAPASPPEPQSPELPPALPSF-CPEAAPAR--------SSGSPEPS------PAIAKAKE 322
            LAPA P EP+ P  PP  P +  P  APA+          G+ +P       P   + + 
Sbjct: 2179 LAPAYPLEPRFPTAPPTYPPYPSPTGAPAQPPMLGASSRPGAGQPGEFHTTPPGTPRHQP 2238

Query: 323  FVADIFRRAK----------EAKG-GVPEEARPALCPGPSGSRCRAHSEPLALCGETAPR 371
               D F + +          E+ G G  + + P L P P G   +A        G ++P 
Sbjct: 2239 STPDPFLKPRCPSLDNLAVPESPGVGGGKASEPLLSPPPFGESRKALEVKKEELGASSPS 2298

Query: 372  DSPP 375
              PP
Sbjct: 2299 YGPP 2302



 Score = 32.3 bits (72), Expect = 1.3
 Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 13/112 (11%)

Query: 279 APASPPEPQSPELPPALPS-FCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGG 337
           +P SPP  +SP  PP   S   P    +  S  PE SP     +   + +    +++   
Sbjct: 579 SPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPE--ASRLSPPPEDSPMS 636

Query: 338 VPEEARPALCPGPSGSRCRAHSEPLALCGETAPRD-----SPPASEAPASEP 384
            P E  P + P P  SR      PL +    +P       SPP  E+P S P
Sbjct: 637 PPPEESP-MSPPPEVSRL----SPLPVVSRLSPPPEESPLSPPPEESPTSPP 683



 Score = 31.2 bits (69), Expect = 2.8
 Identities = 32/107 (29%), Positives = 40/107 (37%), Gaps = 30/107 (28%)

Query: 279 APASPPEPQSP-ELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGG 337
           +P SPP  +SP   PP +    P    +R S  PE SP                      
Sbjct: 633 SPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPL--------------------S 672

Query: 338 VPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEP 384
            P E  P   P P  SR       L+   E +P  SPP  ++PAS P
Sbjct: 673 PPPEESPT-SPPPEASR-------LSPPPEDSP-TSPPPEDSPASPP 710



 Score = 30.4 bits (67), Expect = 4.9
 Identities = 34/119 (28%), Positives = 44/119 (36%), Gaps = 12/119 (10%)

Query: 277 PLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPE-PSPAIAKAKEFVADIFRRAKEAK 335
           P  P   P+ + P L P     C  A P     SP+   P ++   E +    +  +   
Sbjct: 756 PEEPHLSPQAEEPHLSPQPEEPCLCAVPEEPHLSPQAEGPHLSPQPEELHLSPQTEEPHL 815

Query: 336 GGVPEEARPALCPGPSGSRCRAHSEPLALC-----GETAPR-DSPPAS---EAPASEPG 385
             VPEE  P L P P  S     SE   L         +P  + PP S   E P  EPG
Sbjct: 816 SPVPEE--PCLSPQPEESHLSPQSEEPCLSPRPEESHLSPELEKPPLSPRPEKPPEEPG 872


>gi|14043024 BCL2-associated athanogene 3 [Homo sapiens]
          Length = 575

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 54/211 (25%), Positives = 76/211 (36%), Gaps = 54/211 (25%)

Query: 256 VSVHSAGDRSFCQILYDHSTCPLA-----PASPPEPQSPELPPA-LPSFCPEAAPARSSG 309
           + VH+  DR   Q +    T P++     P S P P  PELPP  +P             
Sbjct: 293 IRVHTVVDRPQ-QPMTHRETAPVSQPENKPESKPGPVGPELPPGHIPIQVIRKEVDSKPV 351

Query: 310 SPEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPALCPGPSGSRCRAHSEPLALCGE-- 367
           S +P P   K +                V     P  CP PS       S P ++  E  
Sbjct: 352 SQKPPPPSEKVE----------------VKVPPAPVPCPPPSPGPSAVPSSPKSVATEER 395

Query: 368 ----TAPRDSPP----ASEAPASEPGYVNYTKLYYVLESGEGTEPE-DELEDDKISLPFV 418
               TAP ++ P     +EAP   PG +   K+  +LE  +G E   D  E  K    ++
Sbjct: 396 AAPSTAPAEATPPKPGEAEAPPKHPGVL---KVEAILEKVQGLEQAVDNFEGKKTDKKYL 452

Query: 419 VTDLRGRNLRPMRERTAVQGQYLTVEQLTLD 449
           + +                 +YLT E L LD
Sbjct: 453 MIE-----------------EYLTKELLALD 466


>gi|41281821 SH2 domain containing 3C isoform a [Homo sapiens]
          Length = 860

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 54/184 (29%), Positives = 76/184 (41%), Gaps = 35/184 (19%)

Query: 309 GSPEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPALCPGPSGSRCRAHSEPLALCG-- 366
           G P+P P +  AKE +          K   P E  PA+ P PS        +P    G  
Sbjct: 110 GVPDP-PGLEAAKEVMV---------KATGPLEDTPAMEPNPSAVEVDPIRKPEVPTGDV 159

Query: 367 --ETAPRD--SPPASEAPASEPGYVNYTKLYYVLESGEGTEPEDELEDDKISLPFVVTDL 422
             E  PRD  S  A+  P +   YV ++K  Y+L+S     PE   ++ +  L    TDL
Sbjct: 160 EEERPPRDVHSERAAGEPEAGSDYVKFSKEKYILDS----SPEKLHKELEEELKLSSTDL 215

Query: 423 R------GRNLRPMRERTAVQ--GQYLTVEQLTLDFEYVINEVIRHDATWGHQFCSFSDY 474
           R      GR  R + E T VQ  G +L  + LT   +YV+         W +Q   F   
Sbjct: 216 RSHAWYHGRIPREVSE-TLVQRNGDFLIRDSLTSLGDYVLT------CRWRNQALHFKIN 268

Query: 475 DIVI 478
            +V+
Sbjct: 269 KVVV 272


>gi|42821110 hypothetical protein LOC340602 [Homo sapiens]
          Length = 503

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 37/113 (32%), Positives = 46/113 (40%), Gaps = 16/113 (14%)

Query: 284 PEPQSPELPPALPSFCPEAAPARSSGSPEPSPA-IAKAKE----------FVADIFRRAK 332
           PEP  P  P   PS  P +  + SS + +P PA ++ A E           VA   RR  
Sbjct: 169 PEPLPPSSPGFRPSSYPCSGASTSSQATQPGPALLSHASEARPATRSRITLVASALRR-- 226

Query: 333 EAKGGVPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEPG 385
            A G  P        PGP+      H +P  L  E+AP    PA    AS PG
Sbjct: 227 RASGPGPVIRGCTAQPGPAFPHRATHLDPARLSPESAP---GPARRGRASVPG 276


>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
           sapiens]
          Length = 288

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 37/128 (28%), Positives = 52/128 (40%), Gaps = 8/128 (6%)

Query: 260 SAGDRSFCQILYDHSTCPLAPASPPEPQSPELPPALPSFCPEAA--PARSSGSPEPSPAI 317
           +A   + C    D S   L  ASPP      +P A+    P AA  PA +  +  P+ A 
Sbjct: 114 AAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVR---PPAAGPPAAALAAVYPAAAD 170

Query: 318 AKAKEFVADIFRRAKEAKGGVPEEARPALCPG---PSGSRCRAHSEPLALCGETAPRDSP 374
             A    A     A  A       A  A+CPG   PS +   A S+P A+    +P  + 
Sbjct: 171 PSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAA 230

Query: 375 PASEAPAS 382
           P +  PA+
Sbjct: 231 PLAVNPAA 238


>gi|215820635 protein phosphatase 1, regulatory subunit 13 like
           [Homo sapiens]
          Length = 828

 Score = 39.3 bits (90), Expect = 0.010
 Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 26/133 (19%)

Query: 258 VHSAGDRSFCQILYDHSTCPLAPASPPEPQS-PELPPALPSFCPEAAPARSSGSPEPSPA 316
           V  AGD     +    S   L PA PPE QS PEL            P +  GS E +PA
Sbjct: 473 VLEAGDVDEGPVARPLSPTRLQPALPPEAQSVPELEEVARVLAEIPRPLKRRGSMEQAPA 532

Query: 317 IA-------KAKEFVADIFRR------------------AKEAKGGVPEEARPALCPGPS 351
           +A       + ++ ++ +F R                    EA+ G P  A PA  P P+
Sbjct: 533 VALPPTHKKQYQQIISRLFHRHGGPGPGGPEPELSPITEGSEARAGPPAPAPPAPIPPPA 592

Query: 352 GSRCRAHSEPLAL 364
            S+     +P ++
Sbjct: 593 PSQSSPPEQPQSM 605


>gi|63003907 protein phosphatase 1, regulatory subunit 13 like [Homo
           sapiens]
          Length = 828

 Score = 39.3 bits (90), Expect = 0.010
 Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 26/133 (19%)

Query: 258 VHSAGDRSFCQILYDHSTCPLAPASPPEPQS-PELPPALPSFCPEAAPARSSGSPEPSPA 316
           V  AGD     +    S   L PA PPE QS PEL            P +  GS E +PA
Sbjct: 473 VLEAGDVDEGPVARPLSPTRLQPALPPEAQSVPELEEVARVLAEIPRPLKRRGSMEQAPA 532

Query: 317 IA-------KAKEFVADIFRR------------------AKEAKGGVPEEARPALCPGPS 351
           +A       + ++ ++ +F R                    EA+ G P  A PA  P P+
Sbjct: 533 VALPPTHKKQYQQIISRLFHRHGGPGPGGPEPELSPITEGSEARAGPPAPAPPAPIPPPA 592

Query: 352 GSRCRAHSEPLAL 364
            S+     +P ++
Sbjct: 593 PSQSSPPEQPQSM 605


>gi|147902746 MEX3A protein [Homo sapiens]
          Length = 520

 Score = 38.9 bits (89), Expect = 0.014
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 277 PLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSP 315
           P  PA+PP+P  P  PPA P   P AAPA  +  P  +P
Sbjct: 70  PAQPAAPPQPAPPP-PPAAPPAAPTAAPAAQTPQPPTAP 107


>gi|224177469 SET domain, bifurcated 1 isoform 2 [Homo sapiens]
          Length = 1290

 Score = 38.5 bits (88), Expect = 0.018
 Identities = 37/153 (24%), Positives = 57/153 (37%), Gaps = 10/153 (6%)

Query: 280 PASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVP 339
           P  PP+P +P  PP  P+  P  +P       E   A ++ +        R      G  
Sbjct: 447 PVEPPQPTAPPAPPFPPA--PPLSPQAGDSDLESQLAQSRKQVAKKSTSFRPGSVGSGHS 504

Query: 340 EEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEPGYVNYTKLYYVLESG 399
               PAL    SG +   +    +  G TA   +P A  AP + P       +++ +   
Sbjct: 505 SPTSPALSENVSGGKPGINQTYRSPLGSTASAPAPSALPAPPAPP-------VFHGMLER 557

Query: 400 EGTEPEDELEDDKI-SLPFVVTDLRGRNLRPMR 431
              EP      +K+  LP V +      +RPMR
Sbjct: 558 APAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMR 590


>gi|224177467 SET domain, bifurcated 1 isoform 1 [Homo sapiens]
          Length = 1291

 Score = 38.5 bits (88), Expect = 0.018
 Identities = 37/153 (24%), Positives = 57/153 (37%), Gaps = 10/153 (6%)

Query: 280 PASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVP 339
           P  PP+P +P  PP  P+  P  +P       E   A ++ +        R      G  
Sbjct: 447 PVEPPQPTAPPAPPFPPA--PPLSPQAGDSDLESQLAQSRKQVAKKSTSFRPGSVGSGHS 504

Query: 340 EEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEPGYVNYTKLYYVLESG 399
               PAL    SG +   +    +  G TA   +P A  AP + P       +++ +   
Sbjct: 505 SPTSPALSENVSGGKPGINQTYRSPLGSTASAPAPSALPAPPAPP-------VFHGMLER 557

Query: 400 EGTEPEDELEDDKI-SLPFVVTDLRGRNLRPMR 431
              EP      +K+  LP V +      +RPMR
Sbjct: 558 APAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMR 590


>gi|145309324 FH2 domain containing 1 [Homo sapiens]
          Length = 1143

 Score = 38.5 bits (88), Expect = 0.018
 Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 16/114 (14%)

Query: 273  HSTCPLAPASPPE-PQSPELP---PALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIF 328
            HS  P +P   P+ P  P +P   P +PSF      + S       P +AKA      + 
Sbjct: 1006 HSEGPESPKEEPKTPSVPSVPHELPRVPSFARNTVASSSRSMRTDLPPVAKAPGITRTVS 1065

Query: 329  RRAKEAKGGVPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPAS 382
            +R    KG  PE+A     P  S +  RA S         AP+  P ++E P++
Sbjct: 1066 QRQLRVKGD-PEDA----APKDSSTLRRASS-------ARAPKKRPESAEGPSA 1107


>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
          Length = 1094

 Score = 38.5 bits (88), Expect = 0.018
 Identities = 37/127 (29%), Positives = 51/127 (40%), Gaps = 11/127 (8%)

Query: 272 DHSTCPLAPAS----PPEPQSPELPPALPSFCPEAA-PARSSGSPEPSPAIAKAKEFVAD 326
           D S  P  P S    PP  + PE+    PS    A  P +    P P P   + ++    
Sbjct: 726 DQSPPPSPPPSYHPPPPPTKKPEVVVEAPSASETAEEPLQDPNWPPPPPPAPEEQDLSMA 785

Query: 327 IFRRAKEAKGGV--PEEARPALCP----GPSGSRCRAHSEPLALCGETAPRDSPPASEAP 380
            F   +EA   V  PE A P+  P     P+ S   A +  +   G   P  +PPA    
Sbjct: 786 DFPPPEEAFFSVASPEPAGPSGSPELVSSPAASSSSATALQIQPPGSPDPPPAPPAPAPA 845

Query: 381 ASEPGYV 387
           +S PG+V
Sbjct: 846 SSAPGHV 852


>gi|27502386 nuclear factor of activated T-cells, cytosolic
           component 1 isoform C [Homo sapiens]
          Length = 930

 Score = 38.1 bits (87), Expect = 0.023
 Identities = 58/221 (26%), Positives = 69/221 (31%), Gaps = 63/221 (28%)

Query: 146 PSDASKVIVFGFNTRSANGMLMNMMMMSDENHRDI----YVSTVAVP---------PPGR 192
           P D S  +V GF        LM           D+    Y   VA P         P G 
Sbjct: 724 PPDPSSCLVAGFPPCPQRSTLMPAAPGVSPKLHDLSPAAYTKGVASPGHCHLGLPQPAGE 783

Query: 193 CAACQDASR---AHPGDPNAQCLRHGFMLHTKYQVVYPFPTFQPAFQLKKDQVVLLNTSY 249
             A QD  R    HPG P                        QP   L   QV       
Sbjct: 784 APAVQDVPRPVATHPGSPG-----------------------QPPPALLPQQV------- 813

Query: 250 SLVACAVSVHSAGDRSFCQILYDHSTCPLAPASPPEPQSPELPPALPSFCPEAAPARSSG 309
                     SA   S C    +HS CP +P SPP P + + P  L    P   PA  +G
Sbjct: 814 ----------SAPPSSSCPPGLEHSLCPSSP-SPPLPPATQEPTCLQPCSPACPPA--TG 860

Query: 310 SPEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPALCPGP 350
            P+  P+  +  E      R   E    V E+  P L P P
Sbjct: 861 RPQHLPSTVRRDESPTAGPRLLPE----VHEDGSPNLAPIP 897



 Score = 33.9 bits (76), Expect = 0.44
 Identities = 37/123 (30%), Positives = 47/123 (38%), Gaps = 17/123 (13%)

Query: 272 DHSTCPLAPASPPEPQSPELPPALPSFCPE----AAPARSSGSPEPS------PAIAKAK 321
           D S+C L    PP PQ   L PA P   P+    +  A + G   P       P  A   
Sbjct: 726 DPSSC-LVAGFPPCPQRSTLMPAAPGVSPKLHDLSPAAYTKGVASPGHCHLGLPQPAGEA 784

Query: 322 EFVADIFRRAKEAKGGVPEEARPALCP----GPSGSRCRAHSEPLALCGETAPRDSPPAS 377
             V D+  R      G P +  PAL P     P  S C    E  +LC  +     PPA+
Sbjct: 785 PAVQDV-PRPVATHPGSPGQPPPALLPQQVSAPPSSSCPPGLEH-SLCPSSPSPPLPPAT 842

Query: 378 EAP 380
           + P
Sbjct: 843 QEP 845


>gi|157785645 SPEG complex locus [Homo sapiens]
          Length = 3267

 Score = 38.1 bits (87), Expect = 0.023
 Identities = 36/121 (29%), Positives = 47/121 (38%), Gaps = 19/121 (15%)

Query: 277  PLAPASPPEPQ---SPELPPALPSFC----------PEAAPARSSGSPEPSPAIAKAKEF 323
            PLAPA+P  P    SP  PP  PS            P+  P R  G     P    A+  
Sbjct: 2806 PLAPAAPTPPSVTVSPSSPPTPPSQALSSLKAVGPPPQTPPRRHRGLQAARP----AEPT 2861

Query: 324  VADIFRRAKEAKGGVPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASE 383
            +        E K  V +   P     P G +  + S P+ +   T+   +PPA E PA E
Sbjct: 2862 LPSTHVTPSEPKPFVLDTGTPIPASTPQGVKPVSSSTPVYVV--TSFVSAPPAPEPPAPE 2919

Query: 384  P 384
            P
Sbjct: 2920 P 2920



 Score = 30.0 bits (66), Expect = 6.3
 Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 11/82 (13%)

Query: 274 STCPLAPASPPEPQSPELPPALPSF------CPEAAPARSSGSPEPSPAIAKAKEFVADI 327
           S  P  PA PP  +S  LPP  P         P A PA +  SP          E     
Sbjct: 292 SEAPRRPAQPPPSKSALLPPPSPRVGKRSPPGPPAQPAATPTSPHRRTQEPVLPEDTTTE 351

Query: 328 FRRAKEAKGGVPE-----EARP 344
            +R K++K   P      E+RP
Sbjct: 352 EKRGKKSKSSGPSLAGTAESRP 373


>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
           sapiens]
          Length = 870

 Score = 37.7 bits (86), Expect = 0.030
 Identities = 30/90 (33%), Positives = 36/90 (40%), Gaps = 4/90 (4%)

Query: 293 PALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPALCPGPSG 352
           P+ P    EAAP+ S     PS   A   E  +   R       G+PEEA     P P  
Sbjct: 686 PSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSPPR 745

Query: 353 SRCRAHSEPLALCGETAPRDSPPASEAPAS 382
           +R RA   PL   G    R   PA  A A+
Sbjct: 746 ARARAAPRPLGAHG----RRRSPAKRAEAA 771



 Score = 30.8 bits (68), Expect = 3.7
 Identities = 36/135 (26%), Positives = 48/135 (35%), Gaps = 38/135 (28%)

Query: 279 APASPPEPQSPELPPALPSFCPEAAPARSSGSPE---PSPAIAKAKEFVADIFRRAKEAK 335
           APA   +P+ P +P   P+  P   P  +  S E   P PA + ++   + +     E  
Sbjct: 571 APAESRDPEVPTVPAEAPA--PSPVPLTTPASAEEAIPLPASSDSERSASSV-----EGP 623

Query: 336 GG------VPEEARPALCPG--------PSGSRCR--------------AHSEPLALCGE 367
           GG         EARPA   G        PS  R +               H +  A    
Sbjct: 624 GGALYARVARREARPARARGEIGGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAG 683

Query: 368 TAPRDSPPASEAPAS 382
            AP   PP SEA  S
Sbjct: 684 RAPSPPPPGSEAAPS 698


>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
           sapiens]
          Length = 865

 Score = 37.7 bits (86), Expect = 0.030
 Identities = 30/90 (33%), Positives = 36/90 (40%), Gaps = 4/90 (4%)

Query: 293 PALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPALCPGPSG 352
           P+ P    EAAP+ S     PS   A   E  +   R       G+PEEA     P P  
Sbjct: 681 PSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSPPR 740

Query: 353 SRCRAHSEPLALCGETAPRDSPPASEAPAS 382
           +R RA   PL   G    R   PA  A A+
Sbjct: 741 ARARAAPRPLGAHG----RRRSPAKRAEAA 766



 Score = 30.8 bits (68), Expect = 3.7
 Identities = 36/135 (26%), Positives = 48/135 (35%), Gaps = 38/135 (28%)

Query: 279 APASPPEPQSPELPPALPSFCPEAAPARSSGSPE---PSPAIAKAKEFVADIFRRAKEAK 335
           APA   +P+ P +P   P+  P   P  +  S E   P PA + ++   + +     E  
Sbjct: 566 APAESRDPEVPTVPAEAPA--PSPVPLTTPASAEEAIPLPASSDSERSASSV-----EGP 618

Query: 336 GG------VPEEARPALCPG--------PSGSRCR--------------AHSEPLALCGE 367
           GG         EARPA   G        PS  R +               H +  A    
Sbjct: 619 GGALYARVARREARPARARGEIGGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAG 678

Query: 368 TAPRDSPPASEAPAS 382
            AP   PP SEA  S
Sbjct: 679 RAPSPPPPGSEAAPS 693


>gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo
           sapiens]
          Length = 735

 Score = 37.7 bits (86), Expect = 0.030
 Identities = 42/159 (26%), Positives = 56/159 (35%), Gaps = 6/159 (3%)

Query: 280 PASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVP 339
           PA  PEP  PE  P  P      A   SS     SPA     + +    RR     GG  
Sbjct: 32  PAQRPEPSPPEPEPQAPEGSQAGAEGPSSPEASRSPARGAYLQSLEPSSRR--WVLGGAK 89

Query: 340 EEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEPGYVNYTKLYYVLESG 399
                +L PG  G+   A         E  PR  PPA E P  +PG      L    +  
Sbjct: 90  PAEDTSLGPGVPGTGEPAGEIWYNPIPEEDPR--PPAPEPPGPQPGSAESEGL--APQGA 145

Query: 400 EGTEPEDELEDDKISLPFVVTDLRGRNLRPMRERTAVQG 438
               P  +    K   P     ++ + L  +R R +++G
Sbjct: 146 APASPPTKASRTKSPGPARRLSIKMKKLPELRRRLSLRG 184



 Score = 34.7 bits (78), Expect = 0.26
 Identities = 35/131 (26%), Positives = 46/131 (35%), Gaps = 17/131 (12%)

Query: 277 PLAPASP-PEPQSPELPPALPS-FCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEA 334
           P AP  P P+P S E     P    P + P ++S +  P PA            RR    
Sbjct: 122 PPAPEPPGPQPGSAESEGLAPQGAAPASPPTKASRTKSPGPA------------RRLSIK 169

Query: 335 KGGVPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEPGYVNYTKLYY 394
              +PE  R     GP   R R  + P          DS      PA+ PG     +  Y
Sbjct: 170 MKKLPELRRRLSLRGPRAGRERERAAPAGSVISRYHLDSSVGGPGPAAGPGGTRSPRAGY 229

Query: 395 VLESGEGTEPE 405
           +    +G  PE
Sbjct: 230 L---SDGDSPE 237


>gi|189491742 ataxin 7 isoform b [Homo sapiens]
          Length = 945

 Score = 37.4 bits (85), Expect = 0.040
 Identities = 37/125 (29%), Positives = 51/125 (40%), Gaps = 34/125 (27%)

Query: 293 PALPSFCPEAAPARSSGSPEPSP---AIAKAKEFVADIFRRAKEAKGGVPEEARPALCPG 349
           P  P   P  AP R+S  P  +P     +++K FVA       + K   P   RP  CP 
Sbjct: 407 PPQPLRDPHPAPPRTSQEPHQNPHGVIPSESKPFVAS------KPKPHTPSLPRPPGCPA 460

Query: 350 PSGSRCRAHSEPLALCGETAPRDSPPASEA-----PASEPGYVNYTKLYYVLESGEGTEP 404
             G               +AP D PP  E+     PA+EP     ++L    E GEG + 
Sbjct: 461 QQGG--------------SAPIDPPPVHESPHPPLPATEPA----SRL--SSEEGEGDDK 500

Query: 405 EDELE 409
           E+ +E
Sbjct: 501 EESVE 505


>gi|4506797 ataxin 7 isoform a [Homo sapiens]
          Length = 892

 Score = 37.4 bits (85), Expect = 0.040
 Identities = 37/125 (29%), Positives = 51/125 (40%), Gaps = 34/125 (27%)

Query: 293 PALPSFCPEAAPARSSGSPEPSP---AIAKAKEFVADIFRRAKEAKGGVPEEARPALCPG 349
           P  P   P  AP R+S  P  +P     +++K FVA       + K   P   RP  CP 
Sbjct: 407 PPQPLRDPHPAPPRTSQEPHQNPHGVIPSESKPFVAS------KPKPHTPSLPRPPGCPA 460

Query: 350 PSGSRCRAHSEPLALCGETAPRDSPPASEA-----PASEPGYVNYTKLYYVLESGEGTEP 404
             G               +AP D PP  E+     PA+EP     ++L    E GEG + 
Sbjct: 461 QQGG--------------SAPIDPPPVHESPHPPLPATEPA----SRL--SSEEGEGDDK 500

Query: 405 EDELE 409
           E+ +E
Sbjct: 501 EESVE 505


>gi|79750944 ubiquitin specific peptidase 42 [Homo sapiens]
          Length = 1316

 Score = 37.4 bits (85), Expect = 0.040
 Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 12/126 (9%)

Query: 272 DHSTCPLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRA 331
           D  + P      P+  S +  PAL S  P A      G   P+P ++  ++ + + FR +
Sbjct: 664 DSDSDPKENGLAPDGASCQGQPALHSENPFAKANGLPGKLMPAPLLSLPEDKILETFRLS 723

Query: 332 KEAKGGVPEEARPALCPGPSGSR----------CRAHSEPLALCGETAPRDSPPASE--A 379
            + KG   E + P    GP   R            +  EP A  G ++ + +PP  +   
Sbjct: 724 NKLKGSTDEMSAPGAERGPPEDRDAEPQPGSPAAESLEEPDAAAGLSSTKKAPPPRDPGT 783

Query: 380 PASEPG 385
           PA++ G
Sbjct: 784 PATKEG 789


>gi|28875786 FCH and double SH3 domains 1 [Homo sapiens]
          Length = 690

 Score = 37.4 bits (85), Expect = 0.040
 Identities = 30/88 (34%), Positives = 36/88 (40%), Gaps = 9/88 (10%)

Query: 278 LAPASPPEPQSPE--LP-PALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEA 334
           L P  PPE   PE  LP P+ PSF P A  +   G P P     KA +F   +   A   
Sbjct: 608 LGPPGPPELSDPEQMLPSPSPPSFSPPAPTSVLDGPPAPVLPGDKALDFPGFLDMMAPRL 667

Query: 335 KGGVPEEARPALCPGPSGSRCRAHSEPL 362
           +   P    PA  P P       H +PL
Sbjct: 668 RPMRPPPPPPAKAPDP------GHPDPL 689


>gi|90903231 huntingtin [Homo sapiens]
          Length = 3144

 Score = 37.0 bits (84), Expect = 0.052
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 277 PLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAK 319
           P  P  PP PQ P+ PP      P+  P      P P PA+A+
Sbjct: 42  PPPPPPPPPPQLPQPPPQAQPLLPQPQPPPPPPPPPPGPAVAE 84



 Score = 31.6 bits (70), Expect = 2.2
 Identities = 14/33 (42%), Positives = 15/33 (45%)

Query: 283 PPEPQSPELPPALPSFCPEAAPARSSGSPEPSP 315
           PP P  P  PP LP   P+A P      P P P
Sbjct: 41  PPPPPPPPPPPQLPQPPPQAQPLLPQPQPPPPP 73


>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
          Length = 380

 Score = 37.0 bits (84), Expect = 0.052
 Identities = 30/96 (31%), Positives = 39/96 (40%), Gaps = 14/96 (14%)

Query: 277 PLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKG 336
           P  P  PP P  P  PP LP     AA   + G P P+P +             A +  G
Sbjct: 170 PPPPPGPPPPPGPPPPPGLPPSGVPAAAHGAGGGPPPAPPLP------------AAQGPG 217

Query: 337 GVPEEARPALCPGPSGSRCRAHS-EPLALCGETAPR 371
           G    A P L    +G++ R  S +  A  G TAP+
Sbjct: 218 GGGAGA-PGLAAAIAGAKLRKVSKQEEASGGPTAPK 252


>gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 389

 Score = 37.0 bits (84), Expect = 0.052
 Identities = 27/73 (36%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 277 PLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKG 336
           P +PA PP PQ P  P A P   P     R    P P  A+  A  F     RR   A+G
Sbjct: 171 PFSPA-PPRPQPPSRPAAQPPSRPAFRSPRPVRGPHPRRAVVVAVLFGVQAPRR-DVAEG 228

Query: 337 GVPEEA-RPALCP 348
           G+  +  RP L P
Sbjct: 229 GLRRDGRRPGLAP 241


>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
           sapiens]
          Length = 505

 Score = 36.6 bits (83), Expect = 0.068
 Identities = 36/146 (24%), Positives = 54/146 (36%), Gaps = 17/146 (11%)

Query: 274 STCPLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKE 333
           S   + P +PP P  P  PP      P   P   S      P  A  K  + D  R   +
Sbjct: 364 SVLGVGPVAPPPPPPPPPPPG-----PPPPPGLPSDGDHQVPTTAGNKAALLDQIREGAQ 418

Query: 334 AKGGVPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEPGYV------ 387
            K  V + +RP  C G      +   + + L      ++S P + AP S  G V      
Sbjct: 419 LK-KVEQNSRPVSCSGRDALLDQIR-QGIQLKSVADGQESTPPTPAPTS--GIVGALMEV 474

Query: 388 --NYTKLYYVLESGEGTEPEDELEDD 411
               +K  +  +  E  + E++ EDD
Sbjct: 475 MQKRSKAIHSSDEDEDEDDEEDFEDD 500



 Score = 35.8 bits (81), Expect = 0.12
 Identities = 34/136 (25%), Positives = 46/136 (33%), Gaps = 28/136 (20%)

Query: 254 CAVSVHSAGDRSFCQILYD-------------HSTCPLAPASPPEPQSPELPPALP-SFC 299
           C +S     DR   +++YD                    P  PP    P  PP  P +  
Sbjct: 239 CGISEAQLKDRETSKVIYDFIEKTGGVEAVKNELRRQAPPPPPPSRGGPPPPPPPPHNSG 298

Query: 300 PEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPALCPGPSGSRCRAHS 359
           P   PAR  G+P P P+             RA  A    P  +RP++   P     R + 
Sbjct: 299 PPPPPARGRGAPPPPPS-------------RAPTAAPPPPPPSRPSVAVPPPPPN-RMYP 344

Query: 360 EPLALCGETAPRDSPP 375
            P      +AP   PP
Sbjct: 345 PPPPALPSSAPSGPPP 360



 Score = 31.6 bits (70), Expect = 2.2
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 7/38 (18%)

Query: 280 PASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAI 317
           P  PP    P  PPALPS  P       SG P P P++
Sbjct: 335 PPPPPNRMYPPPPPALPSSAP-------SGPPPPPPSV 365


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,700,355
Number of Sequences: 37866
Number of extensions: 1529974
Number of successful extensions: 16723
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 436
Number of HSP's that attempted gapping in prelim test: 13425
Number of HSP's gapped (non-prelim): 3191
length of query: 600
length of database: 18,247,518
effective HSP length: 108
effective length of query: 492
effective length of database: 14,157,990
effective search space: 6965731080
effective search space used: 6965731080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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