BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|78486540 DDB1 and CUL4 associated factor 15 [Homo sapiens] (600 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|78486540 DDB1 and CUL4 associated factor 15 [Homo sapiens] 1234 0.0 gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 44 6e-04 gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 42 0.002 gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 42 0.002 gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 41 0.003 gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 41 0.004 gi|14043024 BCL2-associated athanogene 3 [Homo sapiens] 40 0.005 gi|41281821 SH2 domain containing 3C isoform a [Homo sapiens] 40 0.005 gi|42821110 hypothetical protein LOC340602 [Homo sapiens] 40 0.006 gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 40 0.008 gi|215820635 protein phosphatase 1, regulatory subunit 13 like [... 39 0.010 gi|63003907 protein phosphatase 1, regulatory subunit 13 like [H... 39 0.010 gi|147902746 MEX3A protein [Homo sapiens] 39 0.014 gi|224177469 SET domain, bifurcated 1 isoform 2 [Homo sapiens] 39 0.018 gi|224177467 SET domain, bifurcated 1 isoform 1 [Homo sapiens] 39 0.018 gi|145309324 FH2 domain containing 1 [Homo sapiens] 39 0.018 gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 39 0.018 gi|27502386 nuclear factor of activated T-cells, cytosolic compo... 38 0.023 gi|157785645 SPEG complex locus [Homo sapiens] 38 0.023 gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 38 0.030 gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo... 38 0.030 gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo sap... 38 0.030 gi|189491742 ataxin 7 isoform b [Homo sapiens] 37 0.040 gi|4506797 ataxin 7 isoform a [Homo sapiens] 37 0.040 gi|79750944 ubiquitin specific peptidase 42 [Homo sapiens] 37 0.040 gi|28875786 FCH and double SH3 domains 1 [Homo sapiens] 37 0.040 gi|90903231 huntingtin [Homo sapiens] 37 0.052 gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 37 0.052 gi|239753975 PREDICTED: hypothetical protein [Homo sapiens] 37 0.052 gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 37 0.068 >gi|78486540 DDB1 and CUL4 associated factor 15 [Homo sapiens] Length = 600 Score = 1234 bits (3194), Expect = 0.0 Identities = 600/600 (100%), Positives = 600/600 (100%) Query: 1 MAPSSKSERNSGAGSGGGGPGGAGGKRAAGRRREHVLKQLERVKISGQLSPRLFRKLPPR 60 MAPSSKSERNSGAGSGGGGPGGAGGKRAAGRRREHVLKQLERVKISGQLSPRLFRKLPPR Sbjct: 1 MAPSSKSERNSGAGSGGGGPGGAGGKRAAGRRREHVLKQLERVKISGQLSPRLFRKLPPR 60 Query: 61 VCVSLKNIVDEDFLYAGHIFLGFSKCGRYVLSYTSSSGDDDFSFYIYHLYWWEFNVHSKL 120 VCVSLKNIVDEDFLYAGHIFLGFSKCGRYVLSYTSSSGDDDFSFYIYHLYWWEFNVHSKL Sbjct: 61 VCVSLKNIVDEDFLYAGHIFLGFSKCGRYVLSYTSSSGDDDFSFYIYHLYWWEFNVHSKL 120 Query: 121 KLVRQVRLFQDEEIYSDLYLTVCEWPSDASKVIVFGFNTRSANGMLMNMMMMSDENHRDI 180 KLVRQVRLFQDEEIYSDLYLTVCEWPSDASKVIVFGFNTRSANGMLMNMMMMSDENHRDI Sbjct: 121 KLVRQVRLFQDEEIYSDLYLTVCEWPSDASKVIVFGFNTRSANGMLMNMMMMSDENHRDI 180 Query: 181 YVSTVAVPPPGRCAACQDASRAHPGDPNAQCLRHGFMLHTKYQVVYPFPTFQPAFQLKKD 240 YVSTVAVPPPGRCAACQDASRAHPGDPNAQCLRHGFMLHTKYQVVYPFPTFQPAFQLKKD Sbjct: 181 YVSTVAVPPPGRCAACQDASRAHPGDPNAQCLRHGFMLHTKYQVVYPFPTFQPAFQLKKD 240 Query: 241 QVVLLNTSYSLVACAVSVHSAGDRSFCQILYDHSTCPLAPASPPEPQSPELPPALPSFCP 300 QVVLLNTSYSLVACAVSVHSAGDRSFCQILYDHSTCPLAPASPPEPQSPELPPALPSFCP Sbjct: 241 QVVLLNTSYSLVACAVSVHSAGDRSFCQILYDHSTCPLAPASPPEPQSPELPPALPSFCP 300 Query: 301 EAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPALCPGPSGSRCRAHSE 360 EAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPALCPGPSGSRCRAHSE Sbjct: 301 EAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPALCPGPSGSRCRAHSE 360 Query: 361 PLALCGETAPRDSPPASEAPASEPGYVNYTKLYYVLESGEGTEPEDELEDDKISLPFVVT 420 PLALCGETAPRDSPPASEAPASEPGYVNYTKLYYVLESGEGTEPEDELEDDKISLPFVVT Sbjct: 361 PLALCGETAPRDSPPASEAPASEPGYVNYTKLYYVLESGEGTEPEDELEDDKISLPFVVT 420 Query: 421 DLRGRNLRPMRERTAVQGQYLTVEQLTLDFEYVINEVIRHDATWGHQFCSFSDYDIVILE 480 DLRGRNLRPMRERTAVQGQYLTVEQLTLDFEYVINEVIRHDATWGHQFCSFSDYDIVILE Sbjct: 421 DLRGRNLRPMRERTAVQGQYLTVEQLTLDFEYVINEVIRHDATWGHQFCSFSDYDIVILE 480 Query: 481 VCPETNQVLINIGLLLLAFPSPTEEGQLRPKTYHTSLKVAWDLNTGIFETVSVGDLTEVK 540 VCPETNQVLINIGLLLLAFPSPTEEGQLRPKTYHTSLKVAWDLNTGIFETVSVGDLTEVK Sbjct: 481 VCPETNQVLINIGLLLLAFPSPTEEGQLRPKTYHTSLKVAWDLNTGIFETVSVGDLTEVK 540 Query: 541 GQTSGSVWSSYRKSCVDMVMKWLVPESSGRYVNRMTNEALHKGCSLKVLADSERYTWIVL 600 GQTSGSVWSSYRKSCVDMVMKWLVPESSGRYVNRMTNEALHKGCSLKVLADSERYTWIVL Sbjct: 541 GQTSGSVWSSYRKSCVDMVMKWLVPESSGRYVNRMTNEALHKGCSLKVLADSERYTWIVL 600 >gi|155030232 proline, glutamic acid and leucine rich protein 1 [Homo sapiens] Length = 1130 Score = 43.5 bits (101), Expect = 6e-04 Identities = 44/151 (29%), Positives = 57/151 (37%), Gaps = 25/151 (16%) Query: 275 TCPL-APASPPEPQSP------ELPPALPSF--CPEAAPARSSG---SPEPSPAIAKAKE 322 TCP AP PPE SP P +PS P A P S+G S P P+ Sbjct: 644 TCPTPAPVPPPEAPSPFRAPPFHPPGPMPSVGSMPSAGPMPSAGPMPSAGPVPSARPGPP 703 Query: 323 FVADIFRRAKEAKGGVPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASE--AP 380 A+ + VP P L PGP R ++ +P+ T P PP Sbjct: 704 TTANHLGLSVPGLVSVP----PRLLPGPENHRAGSNEDPILAPSGTPPPTIPPDETFGGR 759 Query: 381 ASEPGYVNYTKLYYVLESGEGTEPEDELEDD 411 P +V+Y K E ++ E LE D Sbjct: 760 VPRPAFVHYDK-------EEASDVEISLESD 783 Score = 35.8 bits (81), Expect = 0.12 Identities = 38/133 (28%), Positives = 50/133 (37%), Gaps = 32/133 (24%) Query: 286 PQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPA 345 P P LPPALP P +P + PEP P + + ++ E + G + P Sbjct: 977 PPPPTLPPALP---PPESPPKVQPEPEPEPGL------LLEVEEPGTEEERGA--DTAPT 1025 Query: 346 LCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEPGYVNYTKLYYVLESGEGTEPE 405 L P S+ E GE +P PP E EP S T E Sbjct: 1026 LAPEALPSQGEVERE-----GE-SPAAGPPPQELVEEEP-------------SAPPTLLE 1066 Query: 406 DELED--DKISLP 416 +E ED DK+ P Sbjct: 1067 EETEDGSDKVQPP 1079 >gi|156071470 hyperpolarization activated cyclic nucleotide-gated potassium channel 2 [Homo sapiens] Length = 889 Score = 42.0 bits (97), Expect = 0.002 Identities = 34/113 (30%), Positives = 41/113 (36%), Gaps = 20/113 (17%) Query: 277 PLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKG 336 P P +PP+ Q P PP P P AP + E P A A Sbjct: 24 PPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEA---------------ADE 68 Query: 337 GVPE---EARPALC--PGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEP 384 G P +R + C PG G+ A P CG P+ SP E PA P Sbjct: 69 GGPRGRLRSRDSSCGRPGTPGAASTAKGSPNGECGRGEPQCSPAGPEGPARGP 121 Score = 32.3 bits (72), Expect = 1.3 Identities = 34/134 (25%), Positives = 47/134 (35%), Gaps = 16/134 (11%) Query: 251 LVACAVSVHSAGDRSFCQILYDHSTCPLAPASPPEPQSPELPPALPSFCPEAAPARSSGS 310 + + ++ A SFC + PLA SP + P PA + P P S Sbjct: 723 VTSAIATLQQAAAMSFCPQVARPLVGPLALGSPRLVRRPPPGPAPAAASPGPPPPASPPG 782 Query: 311 PEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPALCPGPSGSRCRAHSEPLALCGETAP 370 SP + + GG+P A P P R S PL+ + P Sbjct: 783 APASPRAPRTSPY------------GGLP--AAPLAGPALPARRLSRASRPLSASQPSLP 828 Query: 371 RDS--PPASEAPAS 382 + P AS PAS Sbjct: 829 HGAPGPAASTRPAS 842 >gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] Length = 538 Score = 42.0 bits (97), Expect = 0.002 Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 14/110 (12%) Query: 279 APASPPEPQSPELPPA-----LPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKE 333 A A+PP +P PPA P+ P AA A ++ P P PA + +RA Sbjct: 123 AAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRA------QRAAP 176 Query: 334 AKGGVPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASE 383 P A P P+G R + P A+ P PP AP + Sbjct: 177 LAAPPPAPAAPPAVAPPAGPR---RAPPPAVAAREPPLPPPPQPPAPPQQ 223 Score = 34.7 bits (78), Expect = 0.26 Identities = 34/113 (30%), Positives = 41/113 (36%), Gaps = 15/113 (13%) Query: 283 PPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADI----FRRAKEAKGGV 338 P +P PP P P AA A +P P+PA VA RA A Sbjct: 102 PRRGATPPAPPRAPRGAPAAAAA---AAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATA 158 Query: 339 PEEARPALCPGPSGSRCR-------AHSEPLALCGETAPRDSPPASEAPASEP 384 P PA PGP R A + P A+ PR +PP + A P Sbjct: 159 PPSPGPAQ-PGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPP 210 Score = 33.1 bits (74), Expect = 0.75 Identities = 35/137 (25%), Positives = 48/137 (35%), Gaps = 8/137 (5%) Query: 277 PLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKG 336 P P P PQ + PP P PE R+ G+ P + + +G Sbjct: 212 PPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARPVSLREVVRYLGGSGGAGGRLTRG 271 Query: 337 ---GVPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEPGYVNYTKLY 393 G+ EE A G R LAL P +PPA+ A S ++ Sbjct: 272 RVQGLLEEEAAA-----RGRLERTRLGALALPRGDRPGRAPPAASARPSRSKRGGEERVL 326 Query: 394 YVLESGEGTEPEDELED 410 E + E EDE +D Sbjct: 327 EKEEEEDDDEDEDEEDD 343 >gi|62000702 diacylglycerol kinase kappa [Homo sapiens] Length = 1271 Score = 41.2 bits (95), Expect = 0.003 Identities = 35/111 (31%), Positives = 39/111 (35%), Gaps = 31/111 (27%) Query: 280 PASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVP 339 PA PEP P PP P P A P S SPEP P Sbjct: 20 PAESPEPPPPWPPPPPPPAPPPAPPLLSEASPEPIP------------------------ 55 Query: 340 EEARPALCPGP-----SGSRCRAHSEPL-ALCGETAPRDSPPASEAPASEP 384 E P L PGP S S ++EP E A +P + PA EP Sbjct: 56 -EPCPELAPGPCPEATSESATELYTEPTPEPATEPASEPAPEPATEPAPEP 105 Score = 36.2 bits (82), Expect = 0.089 Identities = 31/105 (29%), Positives = 40/105 (38%), Gaps = 17/105 (16%) Query: 279 APASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGV 338 AP PEP +P P PE AP + P P P A EF + Sbjct: 122 APEPTPEPALESVPEPAPELTPEVAP-ELAPEPTPEPVTELAPEFCPE-----------A 169 Query: 339 PEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSP-PASEAPAS 382 E RP+ P P +C + L +T+P SP P+ P S Sbjct: 170 APEFRPS--PAPCLLQCPVDTRERGL--KTSPSPSPSPSPRTPMS 210 Score = 35.0 bits (79), Expect = 0.20 Identities = 31/111 (27%), Positives = 38/111 (34%), Gaps = 12/111 (10%) Query: 277 PLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPE--PSPAIAKAKEFVADIFRRAKEA 334 P P PP P P PP L PE P PE P P E +++ Sbjct: 28 PPWPPPPPPPAPPPAPPLLSEASPEPIP---EPCPELAPGPCPEATSESATELYTEP--- 81 Query: 335 KGGVPEEA-RPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEP 384 PE A PA P P + A E AP + ++ P EP Sbjct: 82 ---TPEPATEPASEPAPEPATEPAPEPATEPAPEPAPEPATESAPEPTPEP 129 Score = 33.9 bits (76), Expect = 0.44 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 3/43 (6%) Query: 275 TCPLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAI 317 T +AP PEP + P FCPEAAP P P+P + Sbjct: 142 TPEVAPELAPEPTPEPVTELAPEFCPEAAP---EFRPSPAPCL 181 Score = 30.0 bits (66), Expect = 6.3 Identities = 29/106 (27%), Positives = 39/106 (36%), Gaps = 20/106 (18%) Query: 280 PASPPEPQSPELPPALPSFCPEAAPA---RSSGSPEPSPAIAKAKEFVADIFRRAKEAKG 336 PAS P P+ P P+ P PA + +PEP+P A E Sbjct: 89 PASEPAPEPATEPAPEPATEPAPEPAPEPATESAPEPTPEPA---------LESVPEPAP 139 Query: 337 GVPEEARPALCPGPSGSRCRAHSEPLA-LCGETAPRDSPPASEAPA 381 + E P L P P+ EP+ L E P +P +PA Sbjct: 140 ELTPEVAPELAPEPT-------PEPVTELAPEFCPEAAPEFRPSPA 178 >gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo sapiens] Length = 5537 Score = 40.8 bits (94), Expect = 0.004 Identities = 53/192 (27%), Positives = 74/192 (38%), Gaps = 32/192 (16%) Query: 277 PLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKG 336 PL P P P + P L S PE P G PSP +F K Sbjct: 3093 PLGPEERPPPAADASEPRLASVLPEVKPKVEEGGRHPSPC-----QFT---IATPKVEPA 3144 Query: 337 GVPEEARPALCPGPS--GSR-CRAHSEPLALCGETAPRDS------PPA---SEAPASEP 384 L PG S GSR R + P + G TA + S PPA + +P S P Sbjct: 3145 PAANSLGLGLKPGQSMMGSRDTRMGTGPFSSSGHTAEKASFGATGGPPAHLLTPSPLSGP 3204 Query: 385 GYVNYTKLYYVLESGEGTEP------EDELEDDKIS-----LPFVVTDLRGRNLRPMRER 433 G + + + LESG T P DEL+ + S LP ++ DL + ++++ Sbjct: 3205 GGSSLLE-KFELESGALTLPGGPAASGDELDKMESSLVASELPLLIEDLLEHEKKELQKK 3263 Query: 434 TAVQGQYLTVEQ 445 + Q +Q Sbjct: 3264 QQLSAQLQPAQQ 3275 Score = 38.5 bits (88), Expect = 0.018 Identities = 36/118 (30%), Positives = 47/118 (39%), Gaps = 17/118 (14%) Query: 279 APASPPEPQSPELPP--ALPSFCPEAA------PARSSGSPEPSPAIAKAKEFVADIFRR 330 +P SPP +SP PP LP+ P A P S SP P + + +F Sbjct: 543 SPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPP 602 Query: 331 AKEAKGGVPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEPGYVN 388 +E+ P E P L P P SR E + SPP E+P S P V+ Sbjct: 603 FEESPLSPPPEESP-LSPPPEASRLSPPPEDSPM--------SPPPEESPMSPPPEVS 651 Score = 36.2 bits (82), Expect = 0.089 Identities = 37/108 (34%), Positives = 46/108 (42%), Gaps = 17/108 (15%) Query: 279 APASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGV 338 +P SPP +SP PP PEA +R S PE PA + + R +E+ Sbjct: 447 SPLSPPPEESPTSPP------PEA--SRLSPPPEELPASPLPE--ALHLSRPLEESPLSP 496 Query: 339 PEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSP--PASEAPASEP 384 P E P L P P S PL + P +SP PA E P S P Sbjct: 497 PPEESP-LSPPPESS----PFSPLEESPLSPPEESPPSPALETPLSPP 539 Score = 35.8 bits (81), Expect = 0.12 Identities = 30/108 (27%), Positives = 39/108 (36%), Gaps = 9/108 (8%) Query: 277 PLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKG 336 PL+P PPE PP P + +S PE SPA ++ + + E Sbjct: 670 PLSP--PPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSL---PLEESP 724 Query: 337 GVPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEP 384 +P P LCP G H P +PR P A EP Sbjct: 725 LLPLPEEPQLCPRSEG----PHLSPRPEEPHLSPRPEEPHLSPQAEEP 768 Score = 33.1 bits (74), Expect = 0.75 Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 26/124 (20%) Query: 278 LAPASPPEPQSPELPPALPSF-CPEAAPAR--------SSGSPEPS------PAIAKAKE 322 LAPA P EP+ P PP P + P APA+ G+ +P P + + Sbjct: 2179 LAPAYPLEPRFPTAPPTYPPYPSPTGAPAQPPMLGASSRPGAGQPGEFHTTPPGTPRHQP 2238 Query: 323 FVADIFRRAK----------EAKG-GVPEEARPALCPGPSGSRCRAHSEPLALCGETAPR 371 D F + + E+ G G + + P L P P G +A G ++P Sbjct: 2239 STPDPFLKPRCPSLDNLAVPESPGVGGGKASEPLLSPPPFGESRKALEVKKEELGASSPS 2298 Query: 372 DSPP 375 PP Sbjct: 2299 YGPP 2302 Score = 32.3 bits (72), Expect = 1.3 Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 13/112 (11%) Query: 279 APASPPEPQSPELPPALPS-FCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGG 337 +P SPP +SP PP S P + S PE SP + + + +++ Sbjct: 579 SPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPE--ASRLSPPPEDSPMS 636 Query: 338 VPEEARPALCPGPSGSRCRAHSEPLALCGETAPRD-----SPPASEAPASEP 384 P E P + P P SR PL + +P SPP E+P S P Sbjct: 637 PPPEESP-MSPPPEVSRL----SPLPVVSRLSPPPEESPLSPPPEESPTSPP 683 Score = 31.2 bits (69), Expect = 2.8 Identities = 32/107 (29%), Positives = 40/107 (37%), Gaps = 30/107 (28%) Query: 279 APASPPEPQSP-ELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGG 337 +P SPP +SP PP + P +R S PE SP Sbjct: 633 SPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPL--------------------S 672 Query: 338 VPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEP 384 P E P P P SR L+ E +P SPP ++PAS P Sbjct: 673 PPPEESPT-SPPPEASR-------LSPPPEDSP-TSPPPEDSPASPP 710 Score = 30.4 bits (67), Expect = 4.9 Identities = 34/119 (28%), Positives = 44/119 (36%), Gaps = 12/119 (10%) Query: 277 PLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPE-PSPAIAKAKEFVADIFRRAKEAK 335 P P P+ + P L P C A P SP+ P ++ E + + + Sbjct: 756 PEEPHLSPQAEEPHLSPQPEEPCLCAVPEEPHLSPQAEGPHLSPQPEELHLSPQTEEPHL 815 Query: 336 GGVPEEARPALCPGPSGSRCRAHSEPLALC-----GETAPR-DSPPAS---EAPASEPG 385 VPEE P L P P S SE L +P + PP S E P EPG Sbjct: 816 SPVPEE--PCLSPQPEESHLSPQSEEPCLSPRPEESHLSPELEKPPLSPRPEKPPEEPG 872 >gi|14043024 BCL2-associated athanogene 3 [Homo sapiens] Length = 575 Score = 40.4 bits (93), Expect = 0.005 Identities = 54/211 (25%), Positives = 76/211 (36%), Gaps = 54/211 (25%) Query: 256 VSVHSAGDRSFCQILYDHSTCPLA-----PASPPEPQSPELPPA-LPSFCPEAAPARSSG 309 + VH+ DR Q + T P++ P S P P PELPP +P Sbjct: 293 IRVHTVVDRPQ-QPMTHRETAPVSQPENKPESKPGPVGPELPPGHIPIQVIRKEVDSKPV 351 Query: 310 SPEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPALCPGPSGSRCRAHSEPLALCGE-- 367 S +P P K + V P CP PS S P ++ E Sbjct: 352 SQKPPPPSEKVE----------------VKVPPAPVPCPPPSPGPSAVPSSPKSVATEER 395 Query: 368 ----TAPRDSPP----ASEAPASEPGYVNYTKLYYVLESGEGTEPE-DELEDDKISLPFV 418 TAP ++ P +EAP PG + K+ +LE +G E D E K ++ Sbjct: 396 AAPSTAPAEATPPKPGEAEAPPKHPGVL---KVEAILEKVQGLEQAVDNFEGKKTDKKYL 452 Query: 419 VTDLRGRNLRPMRERTAVQGQYLTVEQLTLD 449 + + +YLT E L LD Sbjct: 453 MIE-----------------EYLTKELLALD 466 >gi|41281821 SH2 domain containing 3C isoform a [Homo sapiens] Length = 860 Score = 40.4 bits (93), Expect = 0.005 Identities = 54/184 (29%), Positives = 76/184 (41%), Gaps = 35/184 (19%) Query: 309 GSPEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPALCPGPSGSRCRAHSEPLALCG-- 366 G P+P P + AKE + K P E PA+ P PS +P G Sbjct: 110 GVPDP-PGLEAAKEVMV---------KATGPLEDTPAMEPNPSAVEVDPIRKPEVPTGDV 159 Query: 367 --ETAPRD--SPPASEAPASEPGYVNYTKLYYVLESGEGTEPEDELEDDKISLPFVVTDL 422 E PRD S A+ P + YV ++K Y+L+S PE ++ + L TDL Sbjct: 160 EEERPPRDVHSERAAGEPEAGSDYVKFSKEKYILDS----SPEKLHKELEEELKLSSTDL 215 Query: 423 R------GRNLRPMRERTAVQ--GQYLTVEQLTLDFEYVINEVIRHDATWGHQFCSFSDY 474 R GR R + E T VQ G +L + LT +YV+ W +Q F Sbjct: 216 RSHAWYHGRIPREVSE-TLVQRNGDFLIRDSLTSLGDYVLT------CRWRNQALHFKIN 268 Query: 475 DIVI 478 +V+ Sbjct: 269 KVVV 272 >gi|42821110 hypothetical protein LOC340602 [Homo sapiens] Length = 503 Score = 40.0 bits (92), Expect = 0.006 Identities = 37/113 (32%), Positives = 46/113 (40%), Gaps = 16/113 (14%) Query: 284 PEPQSPELPPALPSFCPEAAPARSSGSPEPSPA-IAKAKE----------FVADIFRRAK 332 PEP P P PS P + + SS + +P PA ++ A E VA RR Sbjct: 169 PEPLPPSSPGFRPSSYPCSGASTSSQATQPGPALLSHASEARPATRSRITLVASALRR-- 226 Query: 333 EAKGGVPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEPG 385 A G P PGP+ H +P L E+AP PA AS PG Sbjct: 227 RASGPGPVIRGCTAQPGPAFPHRATHLDPARLSPESAP---GPARRGRASVPG 276 >gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sapiens] Length = 288 Score = 39.7 bits (91), Expect = 0.008 Identities = 37/128 (28%), Positives = 52/128 (40%), Gaps = 8/128 (6%) Query: 260 SAGDRSFCQILYDHSTCPLAPASPPEPQSPELPPALPSFCPEAA--PARSSGSPEPSPAI 317 +A + C D S L ASPP +P A+ P AA PA + + P+ A Sbjct: 114 AAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVR---PPAAGPPAAALAAVYPAAAD 170 Query: 318 AKAKEFVADIFRRAKEAKGGVPEEARPALCPG---PSGSRCRAHSEPLALCGETAPRDSP 374 A A A A A A+CPG PS + A S+P A+ +P + Sbjct: 171 PSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAA 230 Query: 375 PASEAPAS 382 P + PA+ Sbjct: 231 PLAVNPAA 238 >gi|215820635 protein phosphatase 1, regulatory subunit 13 like [Homo sapiens] Length = 828 Score = 39.3 bits (90), Expect = 0.010 Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 26/133 (19%) Query: 258 VHSAGDRSFCQILYDHSTCPLAPASPPEPQS-PELPPALPSFCPEAAPARSSGSPEPSPA 316 V AGD + S L PA PPE QS PEL P + GS E +PA Sbjct: 473 VLEAGDVDEGPVARPLSPTRLQPALPPEAQSVPELEEVARVLAEIPRPLKRRGSMEQAPA 532 Query: 317 IA-------KAKEFVADIFRR------------------AKEAKGGVPEEARPALCPGPS 351 +A + ++ ++ +F R EA+ G P A PA P P+ Sbjct: 533 VALPPTHKKQYQQIISRLFHRHGGPGPGGPEPELSPITEGSEARAGPPAPAPPAPIPPPA 592 Query: 352 GSRCRAHSEPLAL 364 S+ +P ++ Sbjct: 593 PSQSSPPEQPQSM 605 >gi|63003907 protein phosphatase 1, regulatory subunit 13 like [Homo sapiens] Length = 828 Score = 39.3 bits (90), Expect = 0.010 Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 26/133 (19%) Query: 258 VHSAGDRSFCQILYDHSTCPLAPASPPEPQS-PELPPALPSFCPEAAPARSSGSPEPSPA 316 V AGD + S L PA PPE QS PEL P + GS E +PA Sbjct: 473 VLEAGDVDEGPVARPLSPTRLQPALPPEAQSVPELEEVARVLAEIPRPLKRRGSMEQAPA 532 Query: 317 IA-------KAKEFVADIFRR------------------AKEAKGGVPEEARPALCPGPS 351 +A + ++ ++ +F R EA+ G P A PA P P+ Sbjct: 533 VALPPTHKKQYQQIISRLFHRHGGPGPGGPEPELSPITEGSEARAGPPAPAPPAPIPPPA 592 Query: 352 GSRCRAHSEPLAL 364 S+ +P ++ Sbjct: 593 PSQSSPPEQPQSM 605 >gi|147902746 MEX3A protein [Homo sapiens] Length = 520 Score = 38.9 bits (89), Expect = 0.014 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Query: 277 PLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSP 315 P PA+PP+P P PPA P P AAPA + P +P Sbjct: 70 PAQPAAPPQPAPPP-PPAAPPAAPTAAPAAQTPQPPTAP 107 >gi|224177469 SET domain, bifurcated 1 isoform 2 [Homo sapiens] Length = 1290 Score = 38.5 bits (88), Expect = 0.018 Identities = 37/153 (24%), Positives = 57/153 (37%), Gaps = 10/153 (6%) Query: 280 PASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVP 339 P PP+P +P PP P+ P +P E A ++ + R G Sbjct: 447 PVEPPQPTAPPAPPFPPA--PPLSPQAGDSDLESQLAQSRKQVAKKSTSFRPGSVGSGHS 504 Query: 340 EEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEPGYVNYTKLYYVLESG 399 PAL SG + + + G TA +P A AP + P +++ + Sbjct: 505 SPTSPALSENVSGGKPGINQTYRSPLGSTASAPAPSALPAPPAPP-------VFHGMLER 557 Query: 400 EGTEPEDELEDDKI-SLPFVVTDLRGRNLRPMR 431 EP +K+ LP V + +RPMR Sbjct: 558 APAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMR 590 >gi|224177467 SET domain, bifurcated 1 isoform 1 [Homo sapiens] Length = 1291 Score = 38.5 bits (88), Expect = 0.018 Identities = 37/153 (24%), Positives = 57/153 (37%), Gaps = 10/153 (6%) Query: 280 PASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVP 339 P PP+P +P PP P+ P +P E A ++ + R G Sbjct: 447 PVEPPQPTAPPAPPFPPA--PPLSPQAGDSDLESQLAQSRKQVAKKSTSFRPGSVGSGHS 504 Query: 340 EEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEPGYVNYTKLYYVLESG 399 PAL SG + + + G TA +P A AP + P +++ + Sbjct: 505 SPTSPALSENVSGGKPGINQTYRSPLGSTASAPAPSALPAPPAPP-------VFHGMLER 557 Query: 400 EGTEPEDELEDDKI-SLPFVVTDLRGRNLRPMR 431 EP +K+ LP V + +RPMR Sbjct: 558 APAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMR 590 >gi|145309324 FH2 domain containing 1 [Homo sapiens] Length = 1143 Score = 38.5 bits (88), Expect = 0.018 Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 16/114 (14%) Query: 273 HSTCPLAPASPPE-PQSPELP---PALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIF 328 HS P +P P+ P P +P P +PSF + S P +AKA + Sbjct: 1006 HSEGPESPKEEPKTPSVPSVPHELPRVPSFARNTVASSSRSMRTDLPPVAKAPGITRTVS 1065 Query: 329 RRAKEAKGGVPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPAS 382 +R KG PE+A P S + RA S AP+ P ++E P++ Sbjct: 1066 QRQLRVKGD-PEDA----APKDSSTLRRASS-------ARAPKKRPESAEGPSA 1107 >gi|112734870 hypothetical protein LOC57648 [Homo sapiens] Length = 1094 Score = 38.5 bits (88), Expect = 0.018 Identities = 37/127 (29%), Positives = 51/127 (40%), Gaps = 11/127 (8%) Query: 272 DHSTCPLAPAS----PPEPQSPELPPALPSFCPEAA-PARSSGSPEPSPAIAKAKEFVAD 326 D S P P S PP + PE+ PS A P + P P P + ++ Sbjct: 726 DQSPPPSPPPSYHPPPPPTKKPEVVVEAPSASETAEEPLQDPNWPPPPPPAPEEQDLSMA 785 Query: 327 IFRRAKEAKGGV--PEEARPALCP----GPSGSRCRAHSEPLALCGETAPRDSPPASEAP 380 F +EA V PE A P+ P P+ S A + + G P +PPA Sbjct: 786 DFPPPEEAFFSVASPEPAGPSGSPELVSSPAASSSSATALQIQPPGSPDPPPAPPAPAPA 845 Query: 381 ASEPGYV 387 +S PG+V Sbjct: 846 SSAPGHV 852 >gi|27502386 nuclear factor of activated T-cells, cytosolic component 1 isoform C [Homo sapiens] Length = 930 Score = 38.1 bits (87), Expect = 0.023 Identities = 58/221 (26%), Positives = 69/221 (31%), Gaps = 63/221 (28%) Query: 146 PSDASKVIVFGFNTRSANGMLMNMMMMSDENHRDI----YVSTVAVP---------PPGR 192 P D S +V GF LM D+ Y VA P P G Sbjct: 724 PPDPSSCLVAGFPPCPQRSTLMPAAPGVSPKLHDLSPAAYTKGVASPGHCHLGLPQPAGE 783 Query: 193 CAACQDASR---AHPGDPNAQCLRHGFMLHTKYQVVYPFPTFQPAFQLKKDQVVLLNTSY 249 A QD R HPG P QP L QV Sbjct: 784 APAVQDVPRPVATHPGSPG-----------------------QPPPALLPQQV------- 813 Query: 250 SLVACAVSVHSAGDRSFCQILYDHSTCPLAPASPPEPQSPELPPALPSFCPEAAPARSSG 309 SA S C +HS CP +P SPP P + + P L P PA +G Sbjct: 814 ----------SAPPSSSCPPGLEHSLCPSSP-SPPLPPATQEPTCLQPCSPACPPA--TG 860 Query: 310 SPEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPALCPGP 350 P+ P+ + E R E V E+ P L P P Sbjct: 861 RPQHLPSTVRRDESPTAGPRLLPE----VHEDGSPNLAPIP 897 Score = 33.9 bits (76), Expect = 0.44 Identities = 37/123 (30%), Positives = 47/123 (38%), Gaps = 17/123 (13%) Query: 272 DHSTCPLAPASPPEPQSPELPPALPSFCPE----AAPARSSGSPEPS------PAIAKAK 321 D S+C L PP PQ L PA P P+ + A + G P P A Sbjct: 726 DPSSC-LVAGFPPCPQRSTLMPAAPGVSPKLHDLSPAAYTKGVASPGHCHLGLPQPAGEA 784 Query: 322 EFVADIFRRAKEAKGGVPEEARPALCP----GPSGSRCRAHSEPLALCGETAPRDSPPAS 377 V D+ R G P + PAL P P S C E +LC + PPA+ Sbjct: 785 PAVQDV-PRPVATHPGSPGQPPPALLPQQVSAPPSSSCPPGLEH-SLCPSSPSPPLPPAT 842 Query: 378 EAP 380 + P Sbjct: 843 QEP 845 >gi|157785645 SPEG complex locus [Homo sapiens] Length = 3267 Score = 38.1 bits (87), Expect = 0.023 Identities = 36/121 (29%), Positives = 47/121 (38%), Gaps = 19/121 (15%) Query: 277 PLAPASPPEPQ---SPELPPALPSFC----------PEAAPARSSGSPEPSPAIAKAKEF 323 PLAPA+P P SP PP PS P+ P R G P A+ Sbjct: 2806 PLAPAAPTPPSVTVSPSSPPTPPSQALSSLKAVGPPPQTPPRRHRGLQAARP----AEPT 2861 Query: 324 VADIFRRAKEAKGGVPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASE 383 + E K V + P P G + + S P+ + T+ +PPA E PA E Sbjct: 2862 LPSTHVTPSEPKPFVLDTGTPIPASTPQGVKPVSSSTPVYVV--TSFVSAPPAPEPPAPE 2919 Query: 384 P 384 P Sbjct: 2920 P 2920 Score = 30.0 bits (66), Expect = 6.3 Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 11/82 (13%) Query: 274 STCPLAPASPPEPQSPELPPALPSF------CPEAAPARSSGSPEPSPAIAKAKEFVADI 327 S P PA PP +S LPP P P A PA + SP E Sbjct: 292 SEAPRRPAQPPPSKSALLPPPSPRVGKRSPPGPPAQPAATPTSPHRRTQEPVLPEDTTTE 351 Query: 328 FRRAKEAKGGVPE-----EARP 344 +R K++K P E+RP Sbjct: 352 EKRGKKSKSSGPSLAGTAESRP 373 >gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo sapiens] Length = 870 Score = 37.7 bits (86), Expect = 0.030 Identities = 30/90 (33%), Positives = 36/90 (40%), Gaps = 4/90 (4%) Query: 293 PALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPALCPGPSG 352 P+ P EAAP+ S PS A E + R G+PEEA P P Sbjct: 686 PSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSPPR 745 Query: 353 SRCRAHSEPLALCGETAPRDSPPASEAPAS 382 +R RA PL G R PA A A+ Sbjct: 746 ARARAAPRPLGAHG----RRRSPAKRAEAA 771 Score = 30.8 bits (68), Expect = 3.7 Identities = 36/135 (26%), Positives = 48/135 (35%), Gaps = 38/135 (28%) Query: 279 APASPPEPQSPELPPALPSFCPEAAPARSSGSPE---PSPAIAKAKEFVADIFRRAKEAK 335 APA +P+ P +P P+ P P + S E P PA + ++ + + E Sbjct: 571 APAESRDPEVPTVPAEAPA--PSPVPLTTPASAEEAIPLPASSDSERSASSV-----EGP 623 Query: 336 GG------VPEEARPALCPG--------PSGSRCR--------------AHSEPLALCGE 367 GG EARPA G PS R + H + A Sbjct: 624 GGALYARVARREARPARARGEIGGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAG 683 Query: 368 TAPRDSPPASEAPAS 382 AP PP SEA S Sbjct: 684 RAPSPPPPGSEAAPS 698 >gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo sapiens] Length = 865 Score = 37.7 bits (86), Expect = 0.030 Identities = 30/90 (33%), Positives = 36/90 (40%), Gaps = 4/90 (4%) Query: 293 PALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPALCPGPSG 352 P+ P EAAP+ S PS A E + R G+PEEA P P Sbjct: 681 PSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSPPR 740 Query: 353 SRCRAHSEPLALCGETAPRDSPPASEAPAS 382 +R RA PL G R PA A A+ Sbjct: 741 ARARAAPRPLGAHG----RRRSPAKRAEAA 766 Score = 30.8 bits (68), Expect = 3.7 Identities = 36/135 (26%), Positives = 48/135 (35%), Gaps = 38/135 (28%) Query: 279 APASPPEPQSPELPPALPSFCPEAAPARSSGSPE---PSPAIAKAKEFVADIFRRAKEAK 335 APA +P+ P +P P+ P P + S E P PA + ++ + + E Sbjct: 566 APAESRDPEVPTVPAEAPA--PSPVPLTTPASAEEAIPLPASSDSERSASSV-----EGP 618 Query: 336 GG------VPEEARPALCPG--------PSGSRCR--------------AHSEPLALCGE 367 GG EARPA G PS R + H + A Sbjct: 619 GGALYARVARREARPARARGEIGGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAG 678 Query: 368 TAPRDSPPASEAPAS 382 AP PP SEA S Sbjct: 679 RAPSPPPPGSEAAPS 693 >gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo sapiens] Length = 735 Score = 37.7 bits (86), Expect = 0.030 Identities = 42/159 (26%), Positives = 56/159 (35%), Gaps = 6/159 (3%) Query: 280 PASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVP 339 PA PEP PE P P A SS SPA + + RR GG Sbjct: 32 PAQRPEPSPPEPEPQAPEGSQAGAEGPSSPEASRSPARGAYLQSLEPSSRR--WVLGGAK 89 Query: 340 EEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEPGYVNYTKLYYVLESG 399 +L PG G+ A E PR PPA E P +PG L + Sbjct: 90 PAEDTSLGPGVPGTGEPAGEIWYNPIPEEDPR--PPAPEPPGPQPGSAESEGL--APQGA 145 Query: 400 EGTEPEDELEDDKISLPFVVTDLRGRNLRPMRERTAVQG 438 P + K P ++ + L +R R +++G Sbjct: 146 APASPPTKASRTKSPGPARRLSIKMKKLPELRRRLSLRG 184 Score = 34.7 bits (78), Expect = 0.26 Identities = 35/131 (26%), Positives = 46/131 (35%), Gaps = 17/131 (12%) Query: 277 PLAPASP-PEPQSPELPPALPS-FCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEA 334 P AP P P+P S E P P + P ++S + P PA RR Sbjct: 122 PPAPEPPGPQPGSAESEGLAPQGAAPASPPTKASRTKSPGPA------------RRLSIK 169 Query: 335 KGGVPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEPGYVNYTKLYY 394 +PE R GP R R + P DS PA+ PG + Y Sbjct: 170 MKKLPELRRRLSLRGPRAGRERERAAPAGSVISRYHLDSSVGGPGPAAGPGGTRSPRAGY 229 Query: 395 VLESGEGTEPE 405 + +G PE Sbjct: 230 L---SDGDSPE 237 >gi|189491742 ataxin 7 isoform b [Homo sapiens] Length = 945 Score = 37.4 bits (85), Expect = 0.040 Identities = 37/125 (29%), Positives = 51/125 (40%), Gaps = 34/125 (27%) Query: 293 PALPSFCPEAAPARSSGSPEPSP---AIAKAKEFVADIFRRAKEAKGGVPEEARPALCPG 349 P P P AP R+S P +P +++K FVA + K P RP CP Sbjct: 407 PPQPLRDPHPAPPRTSQEPHQNPHGVIPSESKPFVAS------KPKPHTPSLPRPPGCPA 460 Query: 350 PSGSRCRAHSEPLALCGETAPRDSPPASEA-----PASEPGYVNYTKLYYVLESGEGTEP 404 G +AP D PP E+ PA+EP ++L E GEG + Sbjct: 461 QQGG--------------SAPIDPPPVHESPHPPLPATEPA----SRL--SSEEGEGDDK 500 Query: 405 EDELE 409 E+ +E Sbjct: 501 EESVE 505 >gi|4506797 ataxin 7 isoform a [Homo sapiens] Length = 892 Score = 37.4 bits (85), Expect = 0.040 Identities = 37/125 (29%), Positives = 51/125 (40%), Gaps = 34/125 (27%) Query: 293 PALPSFCPEAAPARSSGSPEPSP---AIAKAKEFVADIFRRAKEAKGGVPEEARPALCPG 349 P P P AP R+S P +P +++K FVA + K P RP CP Sbjct: 407 PPQPLRDPHPAPPRTSQEPHQNPHGVIPSESKPFVAS------KPKPHTPSLPRPPGCPA 460 Query: 350 PSGSRCRAHSEPLALCGETAPRDSPPASEA-----PASEPGYVNYTKLYYVLESGEGTEP 404 G +AP D PP E+ PA+EP ++L E GEG + Sbjct: 461 QQGG--------------SAPIDPPPVHESPHPPLPATEPA----SRL--SSEEGEGDDK 500 Query: 405 EDELE 409 E+ +E Sbjct: 501 EESVE 505 >gi|79750944 ubiquitin specific peptidase 42 [Homo sapiens] Length = 1316 Score = 37.4 bits (85), Expect = 0.040 Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 12/126 (9%) Query: 272 DHSTCPLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRA 331 D + P P+ S + PAL S P A G P+P ++ ++ + + FR + Sbjct: 664 DSDSDPKENGLAPDGASCQGQPALHSENPFAKANGLPGKLMPAPLLSLPEDKILETFRLS 723 Query: 332 KEAKGGVPEEARPALCPGPSGSR----------CRAHSEPLALCGETAPRDSPPASE--A 379 + KG E + P GP R + EP A G ++ + +PP + Sbjct: 724 NKLKGSTDEMSAPGAERGPPEDRDAEPQPGSPAAESLEEPDAAAGLSSTKKAPPPRDPGT 783 Query: 380 PASEPG 385 PA++ G Sbjct: 784 PATKEG 789 >gi|28875786 FCH and double SH3 domains 1 [Homo sapiens] Length = 690 Score = 37.4 bits (85), Expect = 0.040 Identities = 30/88 (34%), Positives = 36/88 (40%), Gaps = 9/88 (10%) Query: 278 LAPASPPEPQSPE--LP-PALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEA 334 L P PPE PE LP P+ PSF P A + G P P KA +F + A Sbjct: 608 LGPPGPPELSDPEQMLPSPSPPSFSPPAPTSVLDGPPAPVLPGDKALDFPGFLDMMAPRL 667 Query: 335 KGGVPEEARPALCPGPSGSRCRAHSEPL 362 + P PA P P H +PL Sbjct: 668 RPMRPPPPPPAKAPDP------GHPDPL 689 >gi|90903231 huntingtin [Homo sapiens] Length = 3144 Score = 37.0 bits (84), Expect = 0.052 Identities = 16/43 (37%), Positives = 20/43 (46%) Query: 277 PLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAK 319 P P PP PQ P+ PP P+ P P P PA+A+ Sbjct: 42 PPPPPPPPPPQLPQPPPQAQPLLPQPQPPPPPPPPPPGPAVAE 84 Score = 31.6 bits (70), Expect = 2.2 Identities = 14/33 (42%), Positives = 15/33 (45%) Query: 283 PPEPQSPELPPALPSFCPEAAPARSSGSPEPSP 315 PP P P PP LP P+A P P P P Sbjct: 41 PPPPPPPPPPPQLPQPPPQAQPLLPQPQPPPPP 73 >gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] Length = 380 Score = 37.0 bits (84), Expect = 0.052 Identities = 30/96 (31%), Positives = 39/96 (40%), Gaps = 14/96 (14%) Query: 277 PLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKG 336 P P PP P P PP LP AA + G P P+P + A + G Sbjct: 170 PPPPPGPPPPPGPPPPPGLPPSGVPAAAHGAGGGPPPAPPLP------------AAQGPG 217 Query: 337 GVPEEARPALCPGPSGSRCRAHS-EPLALCGETAPR 371 G A P L +G++ R S + A G TAP+ Sbjct: 218 GGGAGA-PGLAAAIAGAKLRKVSKQEEASGGPTAPK 252 >gi|239753975 PREDICTED: hypothetical protein [Homo sapiens] Length = 389 Score = 37.0 bits (84), Expect = 0.052 Identities = 27/73 (36%), Positives = 32/73 (43%), Gaps = 3/73 (4%) Query: 277 PLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKG 336 P +PA PP PQ P P A P P R P P A+ A F RR A+G Sbjct: 171 PFSPA-PPRPQPPSRPAAQPPSRPAFRSPRPVRGPHPRRAVVVAVLFGVQAPRR-DVAEG 228 Query: 337 GVPEEA-RPALCP 348 G+ + RP L P Sbjct: 229 GLRRDGRRPGLAP 241 >gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sapiens] Length = 505 Score = 36.6 bits (83), Expect = 0.068 Identities = 36/146 (24%), Positives = 54/146 (36%), Gaps = 17/146 (11%) Query: 274 STCPLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKE 333 S + P +PP P P PP P P S P A K + D R + Sbjct: 364 SVLGVGPVAPPPPPPPPPPPG-----PPPPPGLPSDGDHQVPTTAGNKAALLDQIREGAQ 418 Query: 334 AKGGVPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEPGYV------ 387 K V + +RP C G + + + L ++S P + AP S G V Sbjct: 419 LK-KVEQNSRPVSCSGRDALLDQIR-QGIQLKSVADGQESTPPTPAPTS--GIVGALMEV 474 Query: 388 --NYTKLYYVLESGEGTEPEDELEDD 411 +K + + E + E++ EDD Sbjct: 475 MQKRSKAIHSSDEDEDEDDEEDFEDD 500 Score = 35.8 bits (81), Expect = 0.12 Identities = 34/136 (25%), Positives = 46/136 (33%), Gaps = 28/136 (20%) Query: 254 CAVSVHSAGDRSFCQILYD-------------HSTCPLAPASPPEPQSPELPPALP-SFC 299 C +S DR +++YD P PP P PP P + Sbjct: 239 CGISEAQLKDRETSKVIYDFIEKTGGVEAVKNELRRQAPPPPPPSRGGPPPPPPPPHNSG 298 Query: 300 PEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPALCPGPSGSRCRAHS 359 P PAR G+P P P+ RA A P +RP++ P R + Sbjct: 299 PPPPPARGRGAPPPPPS-------------RAPTAAPPPPPPSRPSVAVPPPPPN-RMYP 344 Query: 360 EPLALCGETAPRDSPP 375 P +AP PP Sbjct: 345 PPPPALPSSAPSGPPP 360 Score = 31.6 bits (70), Expect = 2.2 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 7/38 (18%) Query: 280 PASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAI 317 P PP P PPALPS P SG P P P++ Sbjct: 335 PPPPPNRMYPPPPPALPSSAP-------SGPPPPPPSV 365 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.135 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,700,355 Number of Sequences: 37866 Number of extensions: 1529974 Number of successful extensions: 16723 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 158 Number of HSP's successfully gapped in prelim test: 436 Number of HSP's that attempted gapping in prelim test: 13425 Number of HSP's gapped (non-prelim): 3191 length of query: 600 length of database: 18,247,518 effective HSP length: 108 effective length of query: 492 effective length of database: 14,157,990 effective search space: 6965731080 effective search space used: 6965731080 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.