ATXN7 10441

Name: ATXN7	Sequence: fasta or formatted (945aa)		NCBI GI: 189491742
Description: ataxin 7 isoform b		Referenced in: Cerebellum
Other entries for this name: alt prot [892aa] ataxin 7 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 59 6 C cysteine 2.3 22 1 D aspartate 3.3 31 2 E glutamate 4.0 38 2 F phenylalanine 2.1 20 2 G glycine 6.3 60 2 H histidine 3.9 37 2 I isoleucine 2.5 24 1 K lysine 6.5 61 2 L leucine 6.9 65 2 M methionine 1.8 17 1 N asparagine 4.2 40 2 P proline 11.6 110 5 Q glutamine 4.8 45 10 R arginine 5.7 54 2 S serine 15.9 150 12 T threonine 5.4 51 2 V valine 5.2 49 2 W tryptophan 0.5 5 1 Y tyrosine 0.7 7 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ataxin 7 isoform b ATXN7 0.938 ataxin 7 isoform a ATXN7L1 0.247 ataxin 7-like 1 isoform 1 ATXN7L1 0.182 ataxin 7-like 1 isoform 3 ATXN7L2 0.125 ataxin 7-like 2 ATXN7L1 0.050 ataxin 7-like 1 isoform 2 PCLO 0.024 piccolo isoform 2 PCLO 0.024 piccolo isoform 1 MUC21 0.019 mucin 21 TNRC18 0.018 trinucleotide repeat containing 18 LOC100133142 0.017 PREDICTED: similar to zinc finger protein 208 [Homo... LOC100133142 0.017 PREDICTED: similar to zinc finger protein 208 [Homo... MUC17 0.016 mucin 17 MUC4 0.016 mucin 4 isoform a C14orf4 0.016 chromosome 14 open reading frame 4 SRRM2 0.016 splicing coactivator subunit SRm300 DSPP 0.015 dentin sialophosphoprotein preproprotein MED1 0.015 mediator complex subunit 1 MEF2D 0.015 myocyte enhancer factor 2D SHANK1 0.014 SH3 and multiple ankyrin repeat domains 1 SRRM1 0.014 serine/arginine repetitive matrix 1 PRG4 0.014 proteoglycan 4 isoform D PRG4 0.014 proteoglycan 4 isoform C PRG4 0.014 proteoglycan 4 isoform B PRG4 0.014 proteoglycan 4 isoform A PRR12 0.014 proline rich 12 MDC1 0.013 mediator of DNA-damage checkpoint 1 MUC12 0.013 PREDICTED: mucin 12 ZFHX4 0.013 zinc finger homeodomain 4 MUC5B 0.013 mucin 5, subtype B, tracheobronchial Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.