SETDB1 14816

Name: SETDB1	Sequence: fasta or formatted (1290aa)		NCBI GI: 224177469
Description: SET domain, bifurcated 1 isoform 2		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Other entries for this name: alt prot [1291aa] SET domain, bifurcated 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 74 2 C cysteine 2.8 36 3 D aspartate 6.9 89 3 E glutamate 7.2 93 2 F phenylalanine 3.3 43 2 G glycine 7.4 96 2 H histidine 1.6 20 1 I isoleucine 3.9 50 2 K lysine 7.1 92 2 L leucine 7.3 94 2 M methionine 2.1 27 1 N asparagine 3.4 44 1 P proline 6.6 85 3 Q glutamine 4.0 51 2 R arginine 5.4 70 3 S serine 9.7 125 3 T threonine 5.6 72 2 V valine 5.7 73 2 W tryptophan 1.0 13 2 Y tyrosine 3.3 43 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SET domain, bifurcated 1 isoform 2 SETDB1 0.998 SET domain, bifurcated 1 isoform 1 SETDB2 0.083 SET domain, bifurcated 2 isoform b SETDB2 0.083 SET domain, bifurcated 2 isoform a EHMT2 0.033 euchromatic histone-lysine N-methyltransferase 2 is... EHMT2 0.033 euchromatic histone-lysine N-methyltransferase 2 is... EHMT1 0.032 euchromatic histone-lysine N-methyltransferase 1 is... SUV39H1 0.028 suppressor of variegation 3-9 homolog 1 SETMAR 0.023 SET domain and mariner transposase fusion SUV39H2 0.021 suppressor of variegation 3-9 homolog 2 DSPP 0.015 dentin sialophosphoprotein preproprotein MLL4 0.014 myeloid/lymphoid or mixed-lineage leukemia 4 SETD2 0.014 SET domain containing 2 MLL 0.013 myeloid/lymphoid or mixed-lineage leukemia protein [... ASH1L 0.013 absent, small, or homeotic 1-like MLL2 0.012 myeloid/lymphoid or mixed-lineage leukemia 2 NSD1 0.012 nuclear receptor binding SET domain protein 1 isofor... NSD1 0.012 nuclear receptor binding SET domain protein 1 isofor... SETD1B 0.011 SET domain containing 1B MLL3 0.011 myeloid/lymphoid or mixed-lineage leukemia 3 SETD1A 0.011 SET domain containing 1A WHSC1 0.010 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 0.010 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 0.010 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 0.010 Wolf-Hirschhorn syndrome candidate 1 protein isofor... EZH1 0.010 enhancer of zeste homolog 1 NFRKB 0.010 nuclear factor related to kappaB binding protein is... NFRKB 0.010 nuclear factor related to kappaB binding protein iso... WHSC1L1 0.010 WHSC1L1 protein isoform long EZH2 0.009 enhancer of zeste 2 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.