Guide to the Human Genome
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Name: SIRT7 Sequence: fasta or formatted (400aa) NCBI GI: 7706712
Description:

sirtuin 7

Referenced in:

Histones, Related Proteins, and Modifying Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         35           3
 C cysteine            2.8         11           1
 D aspartate           3.8         15           2
 E glutamate           8.0         32           2
 F phenylalanine       1.0          4           1
 G glycine             7.5         30           2
 H histidine           2.8         11           1
 I isoleucine          3.0         12           1
 K lysine              5.2         21           2
 L leucine            11.0         44           2
 M methionine          1.5          6           1
 N asparagine          1.8          7           1
 P proline             4.8         19           2
 Q glutamine           3.5         14           2
 R arginine           12.0         48           3
 S serine              7.2         29           2
 T threonine           6.0         24           1
 V valine              5.8         23           2
 W tryptophan          1.8          7           1
 Y tyrosine            2.0          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sirtuin 7 
SIRT6                 0.194   sirtuin 6 
SIRT4                 0.078   sirtuin 4 
SIRT3                 0.052   sirtuin 3 isoform a 
SIRT2                 0.047   sirtuin 2 isoform 1 
SIRT2                 0.047   sirtuin 2 isoform 2 
SIRT3                 0.047   sirtuin 3 isoform b 
SIRT5                 0.041   sirtuin 5 isoform 1 
SIRT5                 0.038   sirtuin 5 isoform 2 
SIRT1                 0.027   sirtuin 1 isoform a 
LOC100130174          0.019   PREDICTED: hypothetical protein 
LOC100130174          0.019   PREDICTED: hypothetical protein 
LOC100130174          0.019   PREDICTED: hypothetical protein 
LOC645202             0.018   PREDICTED: hypothetical protein LOC645202 
KIAA1211              0.018   hypothetical protein LOC57482 
CALD1                 0.018   caldesmon 1 isoform 1 
MAP7                  0.017   microtubule-associated protein 7 
TCHH                  0.017   trichohyalin 
SLTM                  0.015   modulator of estrogen induced transcription isoform ...
SLTM                  0.015   modulator of estrogen induced transcription isoform ...
INCENP                0.015   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.015   inner centromere protein antigens 135/155kDa isofor...
ZC3H13                0.015   zinc finger CCCH-type containing 13 
LOC100294088          0.015   PREDICTED: hypothetical protein, partial 
KIF16B                0.015   kinesin-like motor protein C20orf23 
AZI1                  0.015   5-azacytidine induced 1 isoform b 
AZI1                  0.015   5-azacytidine induced 1 isoform a 
RIMBP3B               0.014   RIMS binding protein 3B 
RIMBP3C               0.014   RIMS binding protein 3C 
RIMBP3                0.014   DKFZP434H0735 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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