Guide to the Human Genome
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Name: AZI1 Sequence: fasta or formatted (1044aa) NCBI GI: 111955162
Description:

5-azacytidine induced 1 isoform b

Referenced in:

Centrosome

Other entries for this name:
alt prot [1080aa] 5-azacytidine induced 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2        107           2
 C cysteine            0.8          8           1
 D aspartate           3.0         31           2
 E glutamate          13.0        136           3
 F phenylalanine       1.1         12           1
 G glycine             5.4         56           3
 H histidine           2.0         21           2
 I isoleucine          2.1         22           2
 K lysine              6.3         66           2
 L leucine            10.5        110           3
 M methionine          1.2         13           2
 N asparagine          2.7         28           2
 P proline             5.2         54           3
 Q glutamine           7.8         81           2
 R arginine           10.6        111           2
 S serine              7.6         79           3
 T threonine           5.3         55           2
 V valine              4.0         42           2
 W tryptophan          0.7          7           1
 Y tyrosine            0.5          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   5-azacytidine induced 1 isoform b 
AZI1                  0.991   5-azacytidine induced 1 isoform a 
PLEC1                 0.053   plectin 1 isoform 11 
PLEC1                 0.053   plectin 1 isoform 10 
PLEC1                 0.053   plectin 1 isoform 8 
PLEC1                 0.053   plectin 1 isoform 7 
PLEC1                 0.053   plectin 1 isoform 6 
PLEC1                 0.053   plectin 1 isoform 3 
PLEC1                 0.053   plectin 1 isoform 2 
PLEC1                 0.053   plectin 1 isoform 1 
TCHH                  0.051   trichohyalin 
MYH10                 0.045   myosin, heavy polypeptide 10, non-muscle 
MYH7B                 0.044   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
LOC283767             0.043   golgi autoantigen, golgin subfamily a-like 
MYH14                 0.043   myosin, heavy chain 14 isoform 1 
MYH14                 0.043   myosin, heavy chain 14 isoform 2 
MYH14                 0.043   myosin, heavy chain 14 isoform 3 
MYH11                 0.043   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.043   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.043   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.043   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
CCDC88B               0.042   coiled-coil domain containing 88 
GOLGA4                0.039   golgi autoantigen, golgin subfamily a, 4 
MYH2                  0.039   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.039   myosin, heavy chain 2, skeletal muscle, adult [Homo...
CROCC                 0.039   ciliary rootlet coiled-coil 
MYH4                  0.038   myosin, heavy polypeptide 4, skeletal muscle 
CGN                   0.038   cingulin 
MYH7                  0.038   myosin, heavy chain 7, cardiac muscle, beta 
MYH3                  0.037   myosin, heavy chain 3, skeletal muscle, embryonic [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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