HNRNPU 3695

Name: HNRNPU	Sequence: fasta or formatted (806aa)		NCBI GI: 14141161
Description: heterogeneous nuclear ribonucleoprotein U isoform b		Referenced in: hnRNP
Other entries for this name: alt prot [825aa] heterogeneous nuclear ribonucleoprotein U isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 57 3 C cysteine 1.6 13 1 D aspartate 5.0 40 2 E glutamate 10.8 87 11 F phenylalanine 3.8 31 1 G glycine 12.9 104 6 H histidine 1.6 13 1 I isoleucine 2.5 20 1 K lysine 8.3 67 2 L leucine 5.7 46 2 M methionine 2.4 19 2 N asparagine 5.2 42 2 P proline 5.0 40 2 Q glutamine 6.0 48 4 R arginine 5.5 44 2 S serine 5.0 40 3 T threonine 3.3 27 2 V valine 4.3 35 3 W tryptophan 0.7 6 1 Y tyrosine 3.3 27 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 heterogeneous nuclear ribonucleoprotein U isoform b ... HNRNPU 0.993 heterogeneous nuclear ribonucleoprotein U isoform a ... HNRNPUL1 0.365 heterogeneous nuclear ribonucleoprotein U-like 1 iso... HNRNPUL2 0.345 heterogeneous nuclear ribonucleoprotein U-like 2 [H... HNRNPUL1 0.341 heterogeneous nuclear ribonucleoprotein U-like 1 iso... DDX1 0.038 DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 RPGR 0.035 retinitis pigmentosa GTPase regulator isoform C [Hom... HNRNPA3 0.030 heterogeneous nuclear ribonucleoprotein A3 HNRNPA1 0.027 heterogeneous nuclear ribonucleoprotein A1 isoform b... FUS 0.025 fusion (involved in t(12;16) in malignant liposarcoma... HNRNPA2B1 0.024 heterogeneous nuclear ribonucleoprotein A2/B1 isofor... HNRNPA2B1 0.024 heterogeneous nuclear ribonucleoprotein A2/B1 isoform... FAM98B 0.024 family with sequence similarity 98, member B isofor... MDN1 0.021 MDN1, midasin homolog FBL 0.021 fibrillarin HNRNPA1 0.020 heterogeneous nuclear ribonucleoprotein A1 isoform a ... FAM98A 0.019 hypothetical protein LOC25940 CENPB 0.019 centromere protein B YTHDC1 0.018 splicing factor YT521-B isoform 2 YTHDC1 0.018 splicing factor YT521-B isoform 1 PELP1 0.018 proline, glutamic acid and leucine rich protein 1 [... HNRNPR 0.018 heterogeneous nuclear ribonucleoprotein R isoform 3... HNRNPR 0.018 heterogeneous nuclear ribonucleoprotein R isoform 1... HNRNPR 0.018 heterogeneous nuclear ribonucleoprotein R isoform 4... HNRNPR 0.018 heterogeneous nuclear ribonucleoprotein R isoform 2 [... NEFM 0.018 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.018 neurofilament, medium polypeptide 150kDa isoform 2 ... SYNCRIP 0.018 synaptotagmin binding, cytoplasmic RNA interacting ... SYNCRIP 0.018 synaptotagmin binding, cytoplasmic RNA interacting ... HRC 0.018 histidine rich calcium binding protein precursor [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.