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Search of human proteins with 140560994
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|140560994 growth inhibition and differentiation related
protein 86 [Homo sapiens]
(778 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|140560994 growth inhibition and differentiation related prote... 1546 0.0
gi|209870067 R3H domain and coiled-coil containing 1 [Homo sapiens] 130 6e-30
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 49 2e-05
gi|197333695 poly(A)-specific ribonuclease (deadenylation nuclea... 39 0.024
gi|4505611 poly(A)-specific ribonuclease (deadenylation nuclease... 39 0.024
gi|239758038 PREDICTED: mucin 3A, cell surface associated, parti... 38 0.041
gi|7661936 scaffold attachment factor B2 [Homo sapiens] 35 0.27
gi|52694752 glycoprotein (transmembrane) nmb isoform a precursor... 34 0.59
gi|4505405 glycoprotein (transmembrane) nmb isoform b precursor ... 34 0.59
gi|91176325 bromodomain adjacent to zinc finger domain, 2A [Homo... 34 0.59
gi|22749539 hypothetical protein LOC257169 [Homo sapiens] 34 0.59
gi|4503509 eukaryotic translation initiation factor 3, subunit 1... 33 0.78
gi|34878777 ring finger protein 20 [Homo sapiens] 33 0.78
gi|45238858 WD repeat domain 44 protein [Homo sapiens] 33 0.78
gi|117553580 adaptor-related protein complex 3, delta 1 subunit ... 33 1.0
gi|48255881 troponin T type 2, cardiac isoform 3 [Homo sapiens] 33 1.0
gi|48255877 troponin T type 2, cardiac isoform 1 [Homo sapiens] 33 1.0
gi|239752529 PREDICTED: similar to mucin [Homo sapiens] 33 1.0
gi|167736355 mucin 4 isoform a [Homo sapiens] 33 1.0
gi|56676397 ankyrin repeat domain 11 [Homo sapiens] 33 1.0
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 33 1.0
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 33 1.0
gi|104526627 triadin [Homo sapiens] 33 1.0
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 33 1.3
gi|34878904 synaptonemal complex protein 1 [Homo sapiens] 32 1.7
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 32 1.7
gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1 precu... 32 2.3
gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2 pre... 32 2.3
gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo sa... 32 2.3
gi|239735588 TRAF2 and NCK interacting kinase isoform 6 [Homo sa... 32 2.3
>gi|140560994 growth inhibition and differentiation related protein
86 [Homo sapiens]
Length = 778
Score = 1546 bits (4002), Expect = 0.0
Identities = 778/778 (100%), Positives = 778/778 (100%)
Query: 1 MQQESERCRVRARRPDMALYVPKARRGAVLLKTGDEEESCGSPNSVVKEKQKESSLSQKE 60
MQQESERCRVRARRPDMALYVPKARRGAVLLKTGDEEESCGSPNSVVKEKQKESSLSQKE
Sbjct: 1 MQQESERCRVRARRPDMALYVPKARRGAVLLKTGDEEESCGSPNSVVKEKQKESSLSQKE 60
Query: 61 VFKDKPEARRLNINPDRKEHNCREEKKSSTKLRMDTCLQKTNRVCSKRGTTESKEVLSQG 120
VFKDKPEARRLNINPDRKEHNCREEKKSSTKLRMDTCLQKTNRVCSKRGTTESKEVLSQG
Sbjct: 61 VFKDKPEARRLNINPDRKEHNCREEKKSSTKLRMDTCLQKTNRVCSKRGTTESKEVLSQG 120
Query: 121 QQQGAPNAGVITNAPLQRHFKPKKVECLEVETTDVTGHERILLSQACLEISEAQVPSKPF 180
QQQGAPNAGVITNAPLQRHFKPKKVECLEVETTDVTGHERILLSQACLEISEAQVPSKPF
Sbjct: 121 QQQGAPNAGVITNAPLQRHFKPKKVECLEVETTDVTGHERILLSQACLEISEAQVPSKPF 180
Query: 181 QNVEFCDFSRHEPDGEAFEDKDLEGRIETDTKVLEILYEFPRVFSSVMKPENMIVPIKLS 240
QNVEFCDFSRHEPDGEAFEDKDLEGRIETDTKVLEILYEFPRVFSSVMKPENMIVPIKLS
Sbjct: 181 QNVEFCDFSRHEPDGEAFEDKDLEGRIETDTKVLEILYEFPRVFSSVMKPENMIVPIKLS 240
Query: 241 SDSEIVQQSMQTSDGILNPSSGGITTTSVPGSPDGVFDQTCVDFEVESVGGIANSTGFIL 300
SDSEIVQQSMQTSDGILNPSSGGITTTSVPGSPDGVFDQTCVDFEVESVGGIANSTGFIL
Sbjct: 241 SDSEIVQQSMQTSDGILNPSSGGITTTSVPGSPDGVFDQTCVDFEVESVGGIANSTGFIL 300
Query: 301 DQKDTDSIPATMGHISLSESTNDTVSPVMIRECEKNDSTADELHVKHEPPDTAVLAHETH 360
DQKDTDSIPATMGHISLSESTNDTVSPVMIRECEKNDSTADELHVKHEPPDTAVLAHETH
Sbjct: 301 DQKDTDSIPATMGHISLSESTNDTVSPVMIRECEKNDSTADELHVKHEPPDTAVLAHETH 360
Query: 361 RDSGFKNVGDITNKACMMDTTGMSCSDHVTVDSPYVVAVRIADETSINTRSFSKFVGMSA 420
RDSGFKNVGDITNKACMMDTTGMSCSDHVTVDSPYVVAVRIADETSINTRSFSKFVGMSA
Sbjct: 361 RDSGFKNVGDITNKACMMDTTGMSCSDHVTVDSPYVVAVRIADETSINTRSFSKFVGMSA 420
Query: 421 DATPLHVARSGNDTEDFSNPSACSDIYGESISSHFTESTGKLIESLSDCASSLPIKKIAG 480
DATPLHVARSGNDTEDFSNPSACSDIYGESISSHFTESTGKLIESLSDCASSLPIKKIAG
Sbjct: 421 DATPLHVARSGNDTEDFSNPSACSDIYGESISSHFTESTGKLIESLSDCASSLPIKKIAG 480
Query: 481 SNYNTFLDSELSMLNGTKVLSDSAVGIDLGSTGDTTEALHELRTAEEFKTEEQDDSGSIE 540
SNYNTFLDSELSMLNGTKVLSDSAVGIDLGSTGDTTEALHELRTAEEFKTEEQDDSGSIE
Sbjct: 481 SNYNTFLDSELSMLNGTKVLSDSAVGIDLGSTGDTTEALHELRTAEEFKTEEQDDSGSIE 540
Query: 541 FGVSFPDRESSSMETSIEPKATETSHTEGITAIEESWESMFNDDGDCLDPRLLQELSGNT 600
FGVSFPDRESSSMETSIEPKATETSHTEGITAIEESWESMFNDDGDCLDPRLLQELSGNT
Sbjct: 541 FGVSFPDRESSSMETSIEPKATETSHTEGITAIEESWESMFNDDGDCLDPRLLQELSGNT 600
Query: 601 KSRESIQEPRSDYYNHEVPDIDLSDCEFPHVIEIYDFPQEFRTEDLLRVFCSYQKKGFDI 660
KSRESIQEPRSDYYNHEVPDIDLSDCEFPHVIEIYDFPQEFRTEDLLRVFCSYQKKGFDI
Sbjct: 601 KSRESIQEPRSDYYNHEVPDIDLSDCEFPHVIEIYDFPQEFRTEDLLRVFCSYQKKGFDI 660
Query: 661 KWVDDTHALGVFSSPITARDALGIKHTMVKIRPLSQATRAAKAKARAYAEFLQPAKERPE 720
KWVDDTHALGVFSSPITARDALGIKHTMVKIRPLSQATRAAKAKARAYAEFLQPAKERPE
Sbjct: 661 KWVDDTHALGVFSSPITARDALGIKHTMVKIRPLSQATRAAKAKARAYAEFLQPAKERPE 720
Query: 721 TSAALARRLVISALGVRSKQSKTEREAELKKLQEARERKRLEAKQREDIWEGRDQSTV 778
TSAALARRLVISALGVRSKQSKTEREAELKKLQEARERKRLEAKQREDIWEGRDQSTV
Sbjct: 721 TSAALARRLVISALGVRSKQSKTEREAELKKLQEARERKRLEAKQREDIWEGRDQSTV 778
>gi|209870067 R3H domain and coiled-coil containing 1 [Homo sapiens]
Length = 253
Score = 130 bits (326), Expect = 6e-30
Identities = 89/230 (38%), Positives = 129/230 (56%), Gaps = 18/230 (7%)
Query: 526 EEFKTEEQDDSGSIEFGVSFPDRESSSMETSIEPKATETSHTEGITAIEESWESMFNDDG 585
E E Q G + V R S+++ +E K E+ + + A EE E +DG
Sbjct: 27 EPLGPESQSGKGDM---VEMATRFGSTLQLDLE-KGKESLLEKRLVAEEEEDEEEVEEDG 82
Query: 586 --DCLDP---RLLQELSGN-TKSRESIQEPRSDY--YNHEVPDIDLSDCEFPHVIEIYDF 637
C + LLQE++ N TK I++ D + E+P + + HV+EIYDF
Sbjct: 83 PSSCSEDDYSELLQEITDNLTKKEIQIEKIHLDTSSFVEELP----GEKDLAHVVEIYDF 138
Query: 638 PQEFRTEDLLRVFCSYQKKGFDIKWVDDTHALGVFSSPITARDALGIKHTMVKIRPLSQA 697
+TEDLL F +Q+KGF I+WVDDTHALG+F +A +AL + +++KIRPL+Q
Sbjct: 139 EPALKTEDLLATFSEFQEKGFRIQWVDDTHALGIFPCLASAAEALTREFSVLKIRPLTQG 198
Query: 698 TRAAKAKARAYAEFLQPAKERPETSAALARRLVISALGVRSKQSKTEREA 747
T+ +K KA + L+ KERP+T+A +ARRLV ALG++ K K ER A
Sbjct: 199 TKQSKLKALQRPKLLRLVKERPQTNATVARRLVARALGLQHK--KKERPA 246
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 48.5 bits (114), Expect = 2e-05
Identities = 76/383 (19%), Positives = 150/383 (39%), Gaps = 15/383 (3%)
Query: 240 SSDSEIVQQSMQTSDGILNPSSGGITTTSVPGSPDGVFDQTCVDFEVESVGGIANSTGFI 299
SSDS S +SD + SS + +S S D D S ++++
Sbjct: 607 SSDSSDSSDSSDSSDS-KSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNS 665
Query: 300 LDQKDTDSIPATMGHISLSESTNDTVSPVMIRECEKNDSTADELHVKHEPPDTAVLAHET 359
D D+ + S S++ + S E +DS+ + D++ ++
Sbjct: 666 SDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSS---DSDSSDSSDSSNSN 722
Query: 360 HRDSGFKNVGDITNKACMMDTTGMSCSDHVTVDSPYVVAVRIADETSINTRSFSKFVGMS 419
DS N D ++ + D++ S S + + S + +D + + S S S
Sbjct: 723 SSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNS 782
Query: 420 ADATPLHVARSGNDTEDFSNPSACSDIYGESISSHFTESTGKLIESLSDCASSLPIKKIA 479
+D+ + +D+ + S+ S SD S SS S + SD + S +
Sbjct: 783 SDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSS 842
Query: 480 -------GSNYNTFLDSELSMLNGTKVLSDSAVGIDLGSTGDTTEALHELRTAEEFKTEE 532
GS+ ++ S+ S + + SDS+ D + D+ E+ + +++ + +
Sbjct: 843 DSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSD 902
Query: 533 QDDSGSIEFGVSFPDRESSSMETSIEPKATETSHTEGITAIEESWESMFNDDGDCLDPRL 592
D S S S S+S ++S +++ S++ + +S +S +D + D
Sbjct: 903 SDSSDSSNSSDS--SDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDS--SDSSNSSDSSN 958
Query: 593 LQELSGNTKSRESIQEPRSDYYN 615
+ S ++ S +S SD N
Sbjct: 959 SSDSSNSSDSSDSNSSDSSDSSN 981
Score = 41.2 bits (95), Expect = 0.004
Identities = 71/385 (18%), Positives = 139/385 (36%), Gaps = 29/385 (7%)
Query: 240 SSDSEIVQQSMQTSDGILNPSSGGITTTSVPGSPDGVFDQTCVDFEVESVGGIANSTGFI 299
SSDS S +SD + S + +S S D D S ++ +
Sbjct: 941 SSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDS 1000
Query: 300 LDQKDTDSIPATMGHISLSESTNDTVSPVMIRECEKNDSTADELHVKHEPPDTAVLAHET 359
+ D+ + + S+S+N + S + +DS+ ++
Sbjct: 1001 SNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSS------------------DS 1042
Query: 360 HRDSGFKNVGDITNKACMMDTTGMSCSDHVTVDSPYVVAVRIADETSINTRSFSKFVGMS 419
S + D +N + D++ S S + S + +D + + S S S
Sbjct: 1043 SDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDS 1102
Query: 420 ADATPLHVARSGNDTEDFSNPSACSDIYGESISSHFTESTGKLIESLSDCASSLPIKKIA 479
+D++ + +D+ D S+ S SD S SS ++S+ S S +S +
Sbjct: 1103 SDSSD---SSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDS 1159
Query: 480 GSNYNTFLDSELSMLNGTKVLSDSAVGIDLGSTGDTTEALHELRTAEEF----KTEEQDD 535
+ ++ S+ S + + SDS+ D + D++++ +++ ++ D
Sbjct: 1160 SDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDS 1219
Query: 536 SGSIEFGVSFPDRESSSMETSIEPKATETSHTEGITAIEESWESMFNDDGDCLDPRLLQE 595
S S + S ESS S + + S ++ S ND+ D +
Sbjct: 1220 SDSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDSTSDSNDESDSQS----KS 1275
Query: 596 LSGNTKSRESIQEPRSDYYNHEVPD 620
+GN +S + NH D
Sbjct: 1276 GNGNNNGSDSDSDSEGSDSNHSTSD 1300
Score = 40.4 bits (93), Expect = 0.006
Identities = 66/315 (20%), Positives = 130/315 (41%), Gaps = 40/315 (12%)
Query: 301 DQKDTDSIPATMGHISLSESTNDTVSPVMIRECEKNDSTADELHVKHEPPDTAVLAHETH 360
D D+DS ++ + S+S++ + S + +DS +D + + D+ ++
Sbjct: 589 DSSDSDSSDSS----NSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDS-----DSK 639
Query: 361 RDSGFKNVGDITNKACMMDTTGMSCSDHVTVDSPYVVAVRIADETSINTRSFSKFVGMSA 420
DS N D ++ + D++ S S DS +D + + S S S+
Sbjct: 640 SDSSDSNSSDSSDNSDSSDSSNSSNSS----DS--------SDSSDSSDSSSSSDSSNSS 687
Query: 421 DATPLHVARSGNDTEDFSNPSACSDIYGESISSHFTESTGKLIESLSDCASSLPIKKIAG 480
D++ D+ D SN S SD +S S ++S+ + SD SS
Sbjct: 688 DSS---------DSSDSSNSSESSDS-SDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDS 737
Query: 481 SNYNTFLDSELSMLNGTKVLSDSAVGIDLGSTGDTTEALHELRTAEEFKTEEQDDSGSIE 540
SN + DS S + SDS+ D ++ D++++ +++ + + +DS +
Sbjct: 738 SNSSDSSDSSDSSNS-----SDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSN-- 790
Query: 541 FGVSFPDRESSSMETSIEPKATETSHTEGITAIEESWESMFNDDGDCLDPRLLQELSGNT 600
S S+S ++S ++++S + + S S +D D + + S ++
Sbjct: 791 --SSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSS 848
Query: 601 KSRESIQEPRSDYYN 615
+S RSD N
Sbjct: 849 DGSDSDSSNRSDSSN 863
Score = 30.8 bits (68), Expect = 5.0
Identities = 38/222 (17%), Positives = 85/222 (38%), Gaps = 2/222 (0%)
Query: 404 ETSINTRSFSKFVGMSADATPLHVARSGNDTEDFSNPSACSDIYGESISSHFTESTGKLI 463
++S ++ S +D++ + + + ++ S+ S+ SD S SS ++S+
Sbjct: 553 DSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDS-- 610
Query: 464 ESLSDCASSLPIKKIAGSNYNTFLDSELSMLNGTKVLSDSAVGIDLGSTGDTTEALHELR 523
SD + S K + + + DS+ + SDS+ D + +++ +
Sbjct: 611 SDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSD 670
Query: 524 TAEEFKTEEQDDSGSIEFGVSFPDRESSSMETSIEPKATETSHTEGITAIEESWESMFND 583
+++ + DS + D +SS + + S ++ S +S ++
Sbjct: 671 SSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSN 730
Query: 584 DGDCLDPRLLQELSGNTKSRESIQEPRSDYYNHEVPDIDLSD 625
D D + S ++ S S S ++ D SD
Sbjct: 731 SSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSD 772
>gi|197333695 poly(A)-specific ribonuclease (deadenylation nuclease)
isoform 2 [Homo sapiens]
Length = 578
Score = 38.5 bits (88), Expect = 0.024
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 18/108 (16%)
Query: 613 YYNHEVPDIDLSDCEFPHVIEIYDFPQEFRTEDLLRVFCSYQKKGFDIKWVDDTHALGVF 672
Y N E PD+ HV FP+E++T DL ++F ++ I W+DDT A
Sbjct: 371 YLNLEGPDLQPKRDHVLHVT----FPKEWKTSDLYQLFSAF--GNIQISWIDDTSAFVSL 424
Query: 673 SSPITARDALGIKHTMVKIRPLSQATRAAKAKARAYAEFLQPAKERPE 720
S P VKI ++ + A + + YAE++ +E +
Sbjct: 425 SQP-----------EQVKI-AVNTSKYAESYRIQTYAEYMGRKQEEKQ 460
>gi|4505611 poly(A)-specific ribonuclease (deadenylation nuclease)
isoform 1 [Homo sapiens]
Length = 639
Score = 38.5 bits (88), Expect = 0.024
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 18/108 (16%)
Query: 613 YYNHEVPDIDLSDCEFPHVIEIYDFPQEFRTEDLLRVFCSYQKKGFDIKWVDDTHALGVF 672
Y N E PD+ HV FP+E++T DL ++F ++ I W+DDT A
Sbjct: 432 YLNLEGPDLQPKRDHVLHVT----FPKEWKTSDLYQLFSAF--GNIQISWIDDTSAFVSL 485
Query: 673 SSPITARDALGIKHTMVKIRPLSQATRAAKAKARAYAEFLQPAKERPE 720
S P VKI ++ + A + + YAE++ +E +
Sbjct: 486 SQP-----------EQVKI-AVNTSKYAESYRIQTYAEYMGRKQEEKQ 521
>gi|239758038 PREDICTED: mucin 3A, cell surface associated, partial
[Homo sapiens]
Length = 909
Score = 37.7 bits (86), Expect = 0.041
Identities = 67/343 (19%), Positives = 125/343 (36%), Gaps = 48/343 (13%)
Query: 261 SGGITTTSVPGSPDGVFDQTCVDFEVESVGGIANSTGFILDQKDTDSIPATMGHISLSES 320
+ ITTT P S F + E S + ++ + + S P+ I+++E+
Sbjct: 15 TSSITTTETPSSSTPSFTSSITTTETTSHSTPSFTSSISTTETTSHSTPSFTSLITITET 74
Query: 321 TNDT----VSPVMIRECEKNDSTADELHV------KHEPPD-------TAVLAHETHRDS 363
T+ + + + E + + + + H P T +H T +
Sbjct: 75 TSHSTPSYTTSITTTETPSHSTPSYTTSITTTETPSHSTPSFTSSITTTETTSHSTPSFT 134
Query: 364 GFKNVGDITNKACMMDTTGMSCSDHVTVDSP-YVVAVRIADETSINTRSFSKFV---GMS 419
+ T+ + T+ + ++ + +P Y+ ++ + S +T SFS + +
Sbjct: 135 SSIRTTETTSYSTPSFTSSNTITETTSHSTPSYITSITTTETPSSSTPSFSSSITTTETT 194
Query: 420 ADATPLHVAR-SGNDTEDFSNPSACSDIYGESISSHFTESTGKLIESLSDCASSLPIKKI 478
+ +TP + + +T S PS S I +SH T S I + + S P
Sbjct: 195 SHSTPGFTSSITTTETTSHSTPSFTSSITTTETTSHDTPSFTSSITTSETPSHSTP---- 250
Query: 479 AGSNYNTFLDSELSMLNGTKVLSDSAVGI--DLGSTGDTTEALHELRTAEEFKTEEQDDS 536
S S++ TK S S + +T T+ + H ++ T E
Sbjct: 251 ----------SSTSLITTTKTTSHSTPSFTSSITTTETTSHSAHSFTSS--ITTTETTSH 298
Query: 537 GSIEFGVSFPDRESSSMETSIEPKATETSHTEGITAIEESWES 579
+ F S E++S T TS T IT E + S
Sbjct: 299 NTRSFTSSITTTETNSHST--------TSFTSSITTTETTSHS 333
>gi|7661936 scaffold attachment factor B2 [Homo sapiens]
Length = 953
Score = 35.0 bits (79), Expect = 0.27
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 587 CLDPRLLQELSGNTKSRESIQ-EPR----SDYYNHEVPDIDLSDCEFPHVIEIYDFPQEF 641
C+ EL G S E + EP SD EV LS + H +EI
Sbjct: 464 CISHLHRTELHGRMISVEKAKNEPAGKKLSDRKECEVKKEKLSSVDRHHSVEIKIEKTVI 523
Query: 642 RTEDLLRVFCSYQKKGFDIKWV----DDTHALGVFSSPITARDALGIKHTMVKIRPLSQA 697
+ E+ ++ +KK DIK D+ S +T + G++ T+V + +
Sbjct: 524 KKEE--KIEKKEEKKPEDIKKEEKDQDELKPGPTNRSRVTKSGSRGMERTVVMDKSKGEP 581
Query: 698 TRAAKAKARAYAEFLQPAKERPETSAALARRLVISALGV---RSKQSKTEREAELKKLQE 754
+ K +R+ + +K + S + +R ++S + R ++ + +RE E+++ +
Sbjct: 582 VISVKTTSRSKE---RSSKSQDRKSESKEKRDILSFDKIKEQRERERQRQREREIRETER 638
Query: 755 ARERKRLEAKQREDIWEGRDQ 775
RER++ E +QR + + R +
Sbjct: 639 RREREQREREQRLEAFHERKE 659
Score = 30.0 bits (66), Expect = 8.6
Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 12/104 (11%)
Query: 12 ARRPDMALYVPKARRGAVLLKTGDEEESCGSPNSVVKEKQKESSLSQKEVFKDKPEARRL 71
AR P Y G V + T DE C S + + + E K++P ++L
Sbjct: 442 ARSPGARCY------GFVTMSTSDEATKCISH---LHRTELHGRMISVEKAKNEPAGKKL 492
Query: 72 NINPDRKEHNCREEKKSSTKLRMDTCLQKTNRVCSKRGTTESKE 115
+ DRKE ++EK SS ++ V K E KE
Sbjct: 493 S---DRKECEVKKEKLSSVDRHHSVEIKIEKTVIKKEEKIEKKE 533
>gi|52694752 glycoprotein (transmembrane) nmb isoform a precursor
[Homo sapiens]
Length = 572
Score = 33.9 bits (76), Expect = 0.59
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 327 PVMIRECEKND-STADELHVKHEPPDTAVLAHETHRDSGFKNVGDITNKACMMDTTGMSC 385
PV + +KND +++DE +K P VL H+ S F N I K D TG+
Sbjct: 237 PVFVTMFQKNDRNSSDETFLKDLPIMFDVLIHDP---SHFLNYSTINYKWSFGDNTGLFV 293
Query: 386 SDHVTVDSPYVV 397
S + TV+ YV+
Sbjct: 294 STNHTVNHTYVL 305
>gi|4505405 glycoprotein (transmembrane) nmb isoform b precursor
[Homo sapiens]
Length = 560
Score = 33.9 bits (76), Expect = 0.59
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 327 PVMIRECEKND-STADELHVKHEPPDTAVLAHETHRDSGFKNVGDITNKACMMDTTGMSC 385
PV + +KND +++DE +K P VL H+ S F N I K D TG+
Sbjct: 237 PVFVTMFQKNDRNSSDETFLKDLPIMFDVLIHDP---SHFLNYSTINYKWSFGDNTGLFV 293
Query: 386 SDHVTVDSPYVV 397
S + TV+ YV+
Sbjct: 294 STNHTVNHTYVL 305
>gi|91176325 bromodomain adjacent to zinc finger domain, 2A [Homo
sapiens]
Length = 1905
Score = 33.9 bits (76), Expect = 0.59
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 48 KEKQKESSLSQKEVFK-DKPEARRLNINPDRKEHNCREEKKSSTKLRMDTCLQKTNRVCS 106
K KQ+ SL QKE K K E + ++ + + EKK K++ + K C
Sbjct: 737 KRKQETKSLKQKEAKKKSKAEKEKGKTKQEKLKEKVKREKKEKVKMKEKEEVTKAKPACK 796
Query: 107 KRGTTESKEVLSQGQQQ 123
T ++ L + Q+Q
Sbjct: 797 ADKTLATQRRLEERQRQ 813
>gi|22749539 hypothetical protein LOC257169 [Homo sapiens]
Length = 461
Score = 33.9 bits (76), Expect = 0.59
Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Query: 519 LHELRTAEEFKTEE-QDDSGSIEFGVSFP-DRESSSMETSIEPKATETSHTEGITAIEES 576
LH L+T K ++ Q + V P ++ + + +P TSH +T + +
Sbjct: 282 LHNLKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPVTTVHDR 341
Query: 577 WESMFNDDGDCLDPRLLQELS-GNTKSRESIQEPRSDYYNH 616
G D + Q++ G T ++S + P+ +YY+H
Sbjct: 342 LYGYRTLPGQNSDMKQQQQMEKGTTSKQDSTERPKMNYYDH 382
>gi|4503509 eukaryotic translation initiation factor 3, subunit 10
theta, 150/170kDa [Homo sapiens]
Length = 1382
Score = 33.5 bits (75), Expect = 0.78
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 9/59 (15%)
Query: 718 RPETSAALARRLVI-------SALGV-RSKQSKTEREAELKKLQEA-RERKRLEAKQRE 767
R E LARR I +L + R K+ +REAEL+K+++A ER R EAK+RE
Sbjct: 562 RKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERLRQEAKERE 620
>gi|34878777 ring finger protein 20 [Homo sapiens]
Length = 975
Score = 33.5 bits (75), Expect = 0.78
Identities = 17/56 (30%), Positives = 33/56 (58%)
Query: 712 LQPAKERPETSAALARRLVISALGVRSKQSKTEREAELKKLQEARERKRLEAKQRE 767
L+P E + ++ ++ A ++SK+ + ERE E ++ + RER+R + K+RE
Sbjct: 536 LKPDSEDLSSQSSASKASQEDANEIKSKRDEEERERERREKEREREREREKEKERE 591
>gi|45238858 WD repeat domain 44 protein [Homo sapiens]
Length = 913
Score = 33.5 bits (75), Expect = 0.78
Identities = 37/159 (23%), Positives = 63/159 (39%), Gaps = 15/159 (9%)
Query: 463 IESLSDCASSLPIKKIAGSNYNTFLDSELSMLNGTKVLSDSAVGIDLGSTGDTTE----- 517
++ L S I+ I + + S+ + K LSD A + + D +
Sbjct: 52 VQELKQDVSKKIIESIIEESQKVLQLEDDSLDSKGKELSDQATASPIVARTDLSNIPGLL 111
Query: 518 ALHELRTAEEFKTEEQD--DSGSIEFGVSFPDRESSSMETSIEPKATETSHTEGITAIEE 575
A+ ++ E K E Q+ + +E FP E+ K T+TS TE + +E
Sbjct: 112 AIDQVLPEESQKAESQNTFEETELELKKCFPSDETCEKPVDETTKLTQTSSTEQLNVLET 171
Query: 576 SWESMFND------DGDCLDPRLLQELSGNTKSRESIQE 608
E + + GD L+P LS TK +++E
Sbjct: 172 ETEVLNKEAVEVKGGGDVLEPVSSDSLS--TKDFAAVEE 208
>gi|117553580 adaptor-related protein complex 3, delta 1 subunit
isoform 2 [Homo sapiens]
Length = 1153
Score = 33.1 bits (74), Expect = 1.0
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 48 KEKQKESSLSQKEVFKDKPEARRLNINPDRKEHNCREEKKSSTKLRMDTCLQKTNRVCSK 107
K K+KE +KE K+K + + +P K+ R+EK+ TK + SK
Sbjct: 843 KPKKKEKKHKEKERDKEKKKEKEKKKSPKPKKKKHRKEKEERTK----------GKKKSK 892
Query: 108 RGTTESKEVLSQGQQQGAP 126
+ S+E + Q GAP
Sbjct: 893 KQPPGSEEAAGEPVQNGAP 911
>gi|48255881 troponin T type 2, cardiac isoform 3 [Homo sapiens]
Length = 285
Score = 33.1 bits (74), Expect = 1.0
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 48 KEKQKESSLSQKEVFKDKPEARRLNINPDRKEHNCREEKKSSTKLRMDTCLQKTNRVCSK 107
+EK++++ L+++ +++ E RR + E R++K S + +QKT R K
Sbjct: 144 REKERQNRLAEERARREEEENRR------KAEDEARKKKALSNMMHFGGYIQKTERKSGK 197
Query: 108 RGTTESKE 115
R T K+
Sbjct: 198 RQTEREKK 205
>gi|48255877 troponin T type 2, cardiac isoform 1 [Homo sapiens]
Length = 295
Score = 33.1 bits (74), Expect = 1.0
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 48 KEKQKESSLSQKEVFKDKPEARRLNINPDRKEHNCREEKKSSTKLRMDTCLQKTNRVCSK 107
+EK++++ L+++ +++ E RR + E R++K S + +QKT R K
Sbjct: 154 REKERQNRLAEERARREEEENRR------KAEDEARKKKALSNMMHFGGYIQKTERKSGK 207
Query: 108 RGTTESKE 115
R T K+
Sbjct: 208 RQTEREKK 215
>gi|239752529 PREDICTED: similar to mucin [Homo sapiens]
Length = 594
Score = 33.1 bits (74), Expect = 1.0
Identities = 61/278 (21%), Positives = 99/278 (35%), Gaps = 39/278 (14%)
Query: 258 NPS-SGGITTTSVPGSPDGVFDQTCVDFEVESVGGIANSTGFILDQKDTDSIPATMGHIS 316
NPS + ITTT +F + E S S ++ +T S+ S
Sbjct: 34 NPSLTSAITTTETRSHSPPIFTSSITTIETTSHS--TPSFTSLMTTTETTSLSPPAFTFS 91
Query: 317 LSESTNDTVSPVMIRECEKNDSTADELHVKHEPPDTAVLAHET----HRDSGFKNV---- 368
+S + ++ SP S A H PP L T H F +V
Sbjct: 92 ISTTETNSHSPPSF-----TSSIATTETPSHSPPSFTSLITTTESTSHSPLSFTSVITTT 146
Query: 369 -------GDITNKACMMDTTGMS----CSDHVTVDSP------YVVAVRIADETSINTRS 411
T+ +TT + S T ++P + + + TS + S
Sbjct: 147 ESTSHSTPSFTSSIATTETTSHTPPSFTSLITTTETPSHSNPSFTSLITATESTSHSPPS 206
Query: 412 FSKFV---GMSADATPLHVAR-SGNDTEDFSNPSACSDIYGESISSHFTESTGKLIESLS 467
F+ + G+++ +TP+ + + D+ S PS S I SH T S LI +
Sbjct: 207 FTSAIATTGITSHSTPIFTSLIATTDSTSHSTPSFTSSITSTETISHSTPSFSSLITATK 266
Query: 468 DCASSLP--IKKIAGSNYNTFLDSELSMLNGTKVLSDS 503
+ S P I +N + S S++ T+ S S
Sbjct: 267 TTSHSTPSLTSLITTTNTSHSTPSLTSLVTSTETASHS 304
Score = 32.0 bits (71), Expect = 2.3
Identities = 49/229 (21%), Positives = 86/229 (37%), Gaps = 26/229 (11%)
Query: 261 SGGITTTSVPGSPDGVFDQTCVDFEVESVGGIANSTGFILDQKDTDSIPATMGHISLSES 320
+ I TT P F E S ++ ++ + + S P+ I+ +E+
Sbjct: 106 TSSIATTETPSHSPPSFTSLITTTESTSHSPLSFTSVITTTESTSHSTPSFTSSIATTET 165
Query: 321 TNDT----VSPVMIRECEKNDS-------TADELHVKHEPPDTAVLAHETHRDSGFKNVG 369
T+ T S + E + + TA E H PP S G
Sbjct: 166 TSHTPPSFTSLITTTETPSHSNPSFTSLITATE-STSHSPPSFT---------SAIATTG 215
Query: 370 DITNKACMMDTTGMSCSDHVTVDSPYVVAVRIADET-SINTRSFSKFVGMS---ADATPL 425
IT+ + + T+ ++ +D + +P + + ET S +T SFS + + + +TP
Sbjct: 216 -ITSHSTPIFTSLIATTDSTSHSTPSFTSSITSTETISHSTPSFSSLITATKTTSHSTPS 274
Query: 426 HVARSGNDTEDFSNPSACSDIYGESISSHFTESTGKLIESLSDCASSLP 474
+ S PS S + +SH T S LI ++ + S P
Sbjct: 275 LTSLITTTNTSHSTPSLTSLVTSTETASHSTPSFTSLITTIEATSHSTP 323
>gi|167736355 mucin 4 isoform a [Homo sapiens]
Length = 5284
Score = 33.1 bits (74), Expect = 1.0
Identities = 54/232 (23%), Positives = 84/232 (36%), Gaps = 40/232 (17%)
Query: 304 DTDSIPATMGHISLSESTNDTVS-PVMIRECEKNDSTADELHVKHEPPDTAVLAHETHR- 361
DT +P T S ST DT S PV I S+A H P A H
Sbjct: 1821 DTTPLPVTDAS---SASTGDTTSLPVTI------PSSASSGHTTSLPVTDASSVSTGHAT 1871
Query: 362 -----DSGFKNVGDIT-------NKACMMDTTGMSCSDHVTVDSPYVVAVRIADETSINT 409
D+ + GD T N A DTT + +D +V + + ++ + +S +T
Sbjct: 1872 SLLVTDASSVSTGDTTPLPVTDTNSASTGDTTPLHVTDASSVSTGHATSLPVTSLSSAST 1931
Query: 410 RSFSKFVGMSADATPLHVARSGNDTEDFSNPSACSDIYGESISSHFTESTGKLIESLSDC 469
D TPL V + + + P +D S+ + S S
Sbjct: 1932 ----------GDTTPLPVTSPSSASSGHTTPLPVTD--ASSVPTGHATSLPVTDASSVST 1979
Query: 470 ASSLPIKKIAGSNYNTFLDSELSMLNGTKVLSDSA-----VGIDLGSTGDTT 516
+ P+ S+ +T + L + + + V + A + STGDTT
Sbjct: 1980 GHATPLPVTDASSVSTGHATPLPVTDTSSVSTGQATPLPVTSLSSASTGDTT 2031
>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
Length = 2663
Score = 33.1 bits (74), Expect = 1.0
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Query: 36 EEESCGSPNSVVKEKQKESSLSQKEVFKDKPEARRL-NINPDRKEHNCREEKKSSTKLRM 94
E+E P+ KEK K +K KDK E L D++ C +EKK + +
Sbjct: 1008 EKEKKDGPDKERKEKTKPERYKEKSSDKDKSEKSILEKCQKDKEFDKCFKEKKDTKEKHK 1067
Query: 95 DTCLQKTNRVCSKRGTTESKE 115
DT + R S E KE
Sbjct: 1068 DTHGKDKERKASLDQGKEKKE 1088
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 33.1 bits (74), Expect = 1.0
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Query: 27 GAVLLKTGDEEESCGSPN-SVVKEKQKESSLSQK---EVF---KDKPEARRLNINPDRKE 79
G +L + S SP S + E+ ESS +K E+F KD E + N N D+ E
Sbjct: 1754 GPLLASDVGRDRSAASPVVSSMPERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGE 1813
Query: 80 HNCREEKKSSTKLRMDTCLQKTNRVCSKRGTTESK 114
+EKK + LR + K++ S++ T+ES+
Sbjct: 1814 ----KEKKRDSSLRSRSKRSKSSEHKSRKRTSESR 1844
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 33.1 bits (74), Expect = 1.0
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Query: 27 GAVLLKTGDEEESCGSPN-SVVKEKQKESSLSQK---EVF---KDKPEARRLNINPDRKE 79
G +L + S SP S + E+ ESS +K E+F KD E + N N D+ E
Sbjct: 1754 GPLLASDVGRDRSAASPVVSSMPERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGE 1813
Query: 80 HNCREEKKSSTKLRMDTCLQKTNRVCSKRGTTESK 114
+EKK + LR + K++ S++ T+ES+
Sbjct: 1814 ----KEKKRDSSLRSRSKRSKSSEHKSRKRTSESR 1844
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 33.1 bits (74), Expect = 1.0
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 27/170 (15%)
Query: 30 LLKTGDEEESCGSPNSVVKEKQKESSLSQKEVFKDKPEARRLNINPDRK---EHNCREEK 86
++ + DEE+ G ++ K + E L +KE+ KDK E + P+RK + +E++
Sbjct: 113 IISSEDEEDDDGDEDTD-KGEIDEPPLRKKEIHKDKTEKQE---KPERKIQTKVTHKEKE 168
Query: 87 KSSTKLRMDTCLQKTNRVCSKRGTTESKEVLSQGQQQGAPNAGVITNAPLQRHFKPKKVE 146
K K+R +K + + + E KE T + K K E
Sbjct: 169 KGKEKVREK---EKPEKKATHKEKIEKKEKPE-------------TKTLAKEQKKAKTAE 212
Query: 147 CLEVET-TDVTGHERILLSQACLEISEAQ-VPSKP--FQNVEFCDFSRHE 192
E +T +V G ++ + Q ++ E Q PSKP ++ E S+HE
Sbjct: 213 KSEEKTKKEVKGGKQEKVKQTAAKVKEVQKTPSKPKEKEDKEKAAVSKHE 262
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 32.7 bits (73), Expect = 1.3
Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 671 VFSSPITARDALGIKHTMVKIRPLSQATRAAKAKARAYAEFLQPAKERPETSAALARRLV 730
V +SP + M +ATR K R E + ++ A +R+
Sbjct: 573 VLTSPPAPAPPVTPSKPMAGTTDREEATRLLAEKRRQAREQREREEQERRLQAERDKRMR 632
Query: 731 ISALGVRSKQSKTEREAELKKL--QEARERKRLEAKQREDIWEGRDQS 776
L R +++ EREAE ++ QEARE+ + E +++E + + ++++
Sbjct: 633 EEQLA-REAEARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEA 679
>gi|34878904 synaptonemal complex protein 1 [Homo sapiens]
Length = 976
Score = 32.3 bits (72), Expect = 1.7
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 22/160 (13%)
Query: 59 KEVFKDKPEARRLNINPDRKEHNCREEKKS-STKLRMDTCLQKTNRVCSKRGTTESKEV- 116
+E K K + + + D+ E NC +K K + LQ+ N+ K+GT ESK++
Sbjct: 580 REELKQKRDEVKCKL--DKSEENCNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLN 637
Query: 117 --------LSQGQQQGAPNAGVITNAPLQRHFKPKKVE----CLEVETTDVTGHERILLS 164
L + G IT+ Q+ + KK+ EVE V E + L
Sbjct: 638 VYEIKVNKLELELESAKQKFGEITDT-YQKEIEDKKISEENLLEEVEKAKVIADEAVKLQ 696
Query: 165 QACLEISEAQVPSKPFQNVEFCDFSRHEPDGEAFEDKDLE 204
+ + + K + V + +H+ D + E++D E
Sbjct: 697 KEI----DKRCQHKIAEMVALMEKHKHQYD-KIIEERDSE 731
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 32.3 bits (72), Expect = 1.7
Identities = 21/83 (25%), Positives = 35/83 (42%)
Query: 685 KHTMVKIRPLSQATRAAKAKARAYAEFLQPAKERPETSAALARRLVISALGVRSKQSKTE 744
K ++++ + AA AK + + + E R +A + KQ E
Sbjct: 1440 KKLALRLQEAEEGVEAANAKCSSLEKAKLRLQTESEDVTLELERATSAAAALDKKQRHLE 1499
Query: 745 REAELKKLQEARERKRLEAKQRE 767
R E ++ QE ++ LEA QRE
Sbjct: 1500 RALEERRRQEEEMQRELEAAQRE 1522
>gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1
precursor [Homo sapiens]
Length = 513
Score = 32.0 bits (71), Expect = 2.3
Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 19/130 (14%)
Query: 511 STGDTTEALHELRTAEEFKTEEQDDSGSIEFGVSFPDRES--SSMETSIEPKATETSHTE 568
S D L + T EE K++ ++S S + G+S P R+S S E S E + E S
Sbjct: 274 SEEDDRSELDDNNTMEEVKSDSTENSNSRDTGLSQPRRDSKGDSQEDSKENLSQEESQNV 333
Query: 569 GITAIEESWESMFNDDGDCLDPRLLQELSGNTKSRESIQEPRSD------YYNHEVPDID 622
+ E S E+ L + + + E + E R D Y + D D
Sbjct: 334 DGPSSESSQEA-----------NLSSQENSSESQEEVVSESRGDNPDPTTSYVEDQEDSD 382
Query: 623 LSDCEFPHVI 632
S+ + H +
Sbjct: 383 SSEEDSSHTL 392
>gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2
precursor [Homo sapiens]
Length = 497
Score = 32.0 bits (71), Expect = 2.3
Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 19/130 (14%)
Query: 511 STGDTTEALHELRTAEEFKTEEQDDSGSIEFGVSFPDRES--SSMETSIEPKATETSHTE 568
S D L + T EE K++ ++S S + G+S P R+S S E S E + E S
Sbjct: 258 SEEDDRSELDDNNTMEEVKSDSTENSNSRDTGLSQPRRDSKGDSQEDSKENLSQEESQNV 317
Query: 569 GITAIEESWESMFNDDGDCLDPRLLQELSGNTKSRESIQEPRSD------YYNHEVPDID 622
+ E S E+ L + + + E + E R D Y + D D
Sbjct: 318 DGPSSESSQEA-----------NLSSQENSSESQEEVVSESRGDNPDPTTSYVEDQEDSD 366
Query: 623 LSDCEFPHVI 632
S+ + H +
Sbjct: 367 SSEEDSSHTL 376
>gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo
sapiens]
Length = 1268
Score = 32.0 bits (71), Expect = 2.3
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 13/127 (10%)
Query: 94 MDTCLQKTNRVCSKRGTTESKEVLSQGQQQGAPNAGVITNAPLQRHFK----------PK 143
+++ LQ+T+ S +T S + SQG Q AG ++ + K P
Sbjct: 634 LESPLQRTSSGSSSSSSTPSSQPSSQGGSQPGSQAGSSERTRVRANSKSEGSPVLPHEPA 693
Query: 144 KVECLEVETTDVTGHERIL-LSQACLEISEAQVPSKPFQNVEFCDFSRHEPDGEAFEDKD 202
KV+ E+ D+T R L+ E+ E ++ + D+S + E+ E+++
Sbjct: 694 KVK--PEESRDITRPSRPADLTALAKELRELRIEETNRPMKKVTDYSSSSEESESSEEEE 751
Query: 203 LEGRIET 209
+G ET
Sbjct: 752 EDGESET 758
>gi|239735588 TRAF2 and NCK interacting kinase isoform 6 [Homo
sapiens]
Length = 1297
Score = 32.0 bits (71), Expect = 2.3
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 13/127 (10%)
Query: 94 MDTCLQKTNRVCSKRGTTESKEVLSQGQQQGAPNAGVITNAPLQRHFK----------PK 143
+++ LQ+T+ S +T S + SQG Q AG ++ + K P
Sbjct: 663 LESPLQRTSSGSSSSSSTPSSQPSSQGGSQPGSQAGSSERTRVRANSKSEGSPVLPHEPA 722
Query: 144 KVECLEVETTDVTGHERIL-LSQACLEISEAQVPSKPFQNVEFCDFSRHEPDGEAFEDKD 202
KV+ E+ D+T R L+ E+ E ++ + D+S + E+ E+++
Sbjct: 723 KVK--PEESRDITRPSRPADLTALAKELRELRIEETNRPMKKVTDYSSSSEESESSEEEE 780
Query: 203 LEGRIET 209
+G ET
Sbjct: 781 EDGESET 787
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.128 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,465,248
Number of Sequences: 37866
Number of extensions: 1336757
Number of successful extensions: 4734
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 4533
Number of HSP's gapped (non-prelim): 298
length of query: 778
length of database: 18,247,518
effective HSP length: 110
effective length of query: 668
effective length of database: 14,082,258
effective search space: 9406948344
effective search space used: 9406948344
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.