Guide to the Human Genome
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Name: MUC3A Sequence: fasta or formatted (909aa) NCBI GI: 239758038
Description:

PREDICTED: mucin 3A, cell surface associated, partial

Referenced in:

Mucins

Other entries for this name:
alt prot [1486aa] PREDICTED: mucin 3A, intestinal
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.9         17           1
 C cysteine            1.3         12           1
 D aspartate           1.3         12           1
 E glutamate           4.2         38           1
 F phenylalanine       3.5         32           1
 G glycine             2.5         23           2
 H histidine           2.6         24           1
 I isoleucine          6.2         56           2
 K lysine              0.4          4           1
 L leucine             4.0         36           1
 M methionine          1.1         10           2
 N asparagine          1.2         11           1
 P proline             8.9         81           2
 Q glutamine           2.0         18           1
 R arginine            1.8         16           2
 S serine             23.0        209           3
 T threonine          29.3        266           4
 V valine              2.8         25           2
 W tryptophan          0.4          4           1
 X unknown             0.8          7           7
 Y tyrosine            0.9          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: mucin 3A, cell surface associated, parti... 
MUC3A                 0.810   PREDICTED: mucin 3A, intestinal 
MUC3B                 0.700   PREDICTED: mucin 3B, cell surface associated, parti...
LOC100134138          0.310   PREDICTED: similar to mucin, partial 
LOC100133408          0.289   PREDICTED: similar to mucin 
MUC2                  0.175   mucin 2 precursor 
LOC732156             0.173   PREDICTED: similar to Mucin-3A 
LOC100131514          0.153   PREDICTED: similar to hCG1747327, partial 
MUC17                 0.147   mucin 17 
LOC729792             0.128   PREDICTED: hypothetical protein 
LOC100294136          0.128   PREDICTED: hypothetical protein 
LOC100294091          0.128   PREDICTED: hypothetical protein 
LOC100294249          0.127   PREDICTED: hypothetical protein XP_002344067 
LOC729792             0.126   PREDICTED: hypothetical protein 
LOC100294501          0.126   PREDICTED: hypothetical protein 
LOC729792             0.126   PREDICTED: hypothetical protein 
LOC730401             0.126   PREDICTED: hypothetical protein 
LOC100294238          0.124   PREDICTED: hypothetical protein 
LOC100294204          0.124   PREDICTED: hypothetical protein 
MUC6                  0.124   mucin 6, gastric 
MUC12                 0.120   PREDICTED: mucin 12 
MUC5B                 0.120   mucin 5, subtype B, tracheobronchial 
MUC5AC                0.119   mucin 5AC 
MUC12                 0.117   PREDICTED: mucin 12 
LOC100133790          0.115   PREDICTED: intestinal mucin-like, partial 
MUC12                 0.113   PREDICTED: mucin 12, cell surface associated 
MUC4                  0.105   mucin 4 isoform a 
LOC100294420          0.101   PREDICTED: similar to mucin 2 
LOC100133714          0.094   PREDICTED: similar to Mucin-12, partial 
MUC16                 0.085   mucin 16 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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