LOC100133408 21258

Name: LOC100133408	Sequence: fasta or formatted (594aa)		NCBI GI: 239752529
Description: PREDICTED: similar to mucin		Referenced in: Mucins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.0 24 1 C cysteine 0.0 0 0 D aspartate 0.3 2 1 E glutamate 3.7 22 1 F phenylalanine 4.7 28 1 G glycine 0.7 4 1 H histidine 6.4 38 3 I isoleucine 7.2 43 2 K lysine 1.0 6 1 L leucine 5.6 33 2 M methionine 0.7 4 1 N asparagine 0.7 4 1 P proline 8.8 52 2 Q glutamine 0.2 1 1 R arginine 0.8 5 1 S serine 24.6 146 3 T threonine 29.3 174 3 V valine 0.8 5 1 W tryptophan 0.2 1 1 Y tyrosine 0.3 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to mucin LOC100134138 0.722 PREDICTED: similar to mucin, partial MUC3A 0.444 PREDICTED: mucin 3A, cell surface associated, parti... MUC3A 0.312 PREDICTED: mucin 3A, intestinal MUC3B 0.263 PREDICTED: mucin 3B, cell surface associated, parti... MUC2 0.161 mucin 2 precursor MUC6 0.142 mucin 6, gastric LOC100131514 0.138 PREDICTED: similar to hCG1747327, partial MUC5B 0.135 mucin 5, subtype B, tracheobronchial LOC100294420 0.130 PREDICTED: similar to mucin 2 MUC12 0.130 PREDICTED: mucin 12 MUC17 0.127 mucin 17 LOC100133790 0.125 PREDICTED: intestinal mucin-like, partial MUC5AC 0.121 mucin 5AC MUC12 0.118 PREDICTED: mucin 12 LOC100294249 0.118 PREDICTED: hypothetical protein XP_002344067 MUC12 0.117 PREDICTED: mucin 12 LOC729792 0.117 PREDICTED: hypothetical protein LOC729792 0.117 PREDICTED: hypothetical protein LOC729792 0.117 PREDICTED: hypothetical protein LOC100294501 0.117 PREDICTED: hypothetical protein LOC100294238 0.117 PREDICTED: hypothetical protein LOC100294204 0.117 PREDICTED: hypothetical protein LOC100294136 0.117 PREDICTED: hypothetical protein LOC100294091 0.117 PREDICTED: hypothetical protein LOC730401 0.117 PREDICTED: hypothetical protein MUC4 0.112 mucin 4 isoform a LOC100133714 0.111 PREDICTED: similar to Mucin-12, partial MUC12 0.111 PREDICTED: mucin 12, cell surface associated LOC732156 0.110 PREDICTED: similar to Mucin-3A Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.