GPNMB 32334

Name: GPNMB	Sequence: fasta or formatted (572aa)		NCBI GI: 52694752
Description: glycoprotein (transmembrane) nmb isoform a precursor		Referenced in: Lysosomes and Related Organelles
Other entries for this name: alt prot [560aa] glycoprotein (transmembrane) nmb isoform b precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.9 28 3 C cysteine 2.3 13 1 D aspartate 5.6 32 2 E glutamate 4.2 24 1 F phenylalanine 4.5 26 2 G glycine 6.1 35 2 H histidine 2.4 14 2 I isoleucine 4.5 26 2 K lysine 4.2 24 2 L leucine 8.6 49 3 M methionine 1.7 10 1 N asparagine 7.3 42 1 P proline 7.7 44 7 Q glutamine 3.0 17 1 R arginine 4.5 26 2 S serine 7.3 42 2 T threonine 6.8 39 2 V valine 8.7 50 2 W tryptophan 1.9 11 1 Y tyrosine 3.5 20 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 glycoprotein (transmembrane) nmb isoform a precursor... GPNMB 0.972 glycoprotein (transmembrane) nmb isoform b precursor ... SILV 0.121 silver homolog TMEM130 0.018 transmembrane protein 130 isoform c TMEM130 0.018 transmembrane protein 130 isoform a TMEM130 0.018 transmembrane protein 130 isoform b PELP1 0.014 proline, glutamic acid and leucine rich protein 1 [... ZNF219 0.013 zinc finger protein 219 ZNF219 0.013 zinc finger protein 219 ZNF219 0.013 zinc finger protein 219 DAAM2 0.012 dishevelled associated activator of morphogenesis 2 ... RAPH1 0.011 Ras association and pleckstrin homology domains 1 is... PCLO 0.011 piccolo isoform 2 PCLO 0.011 piccolo isoform 1 ZFPM1 0.011 zinc finger protein, multitype 1 WASL 0.010 Wiskott-Aldrich syndrome gene-like protein FMNL2 0.010 formin-like 2 C19orf26 0.010 downstream of Stk11 SMARCA5 0.010 SWI/SNF-related matrix-associated actin-dependent re... PKD1 0.010 polycystin 1 isoform 2 precursor PKD1 0.010 polycystin 1 isoform 1 precursor CTNND2 0.010 catenin (cadherin-associated protein), delta 2 (neur... WIPF3 0.010 WAS/WASL interacting protein family, member 3 [Homo... RANBP9 0.009 RAN binding protein 9 LOC100291632 0.009 PREDICTED: hypothetical protein XP_002344527 LOC100288471 0.009 PREDICTED: hypothetical protein LOC100288471 0.009 PREDICTED: hypothetical protein XP_002343034 KIAA1429 0.009 hypothetical protein LOC25962 isoform 1 KIAA1429 0.009 hypothetical protein LOC25962 isoform 2 MEF2A 0.009 myocyte enhancer factor 2A isoform 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.