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Search of human proteins with 13994345
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13994345 killer-specific secretory protein of 37 kDa
precursor [Homo sapiens]
(223 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13994345 killer-specific secretory protein of 37 kDa precurso... 476 e-135
gi|4826754 fibroblast growth factor binding protein 1 [Homo sapi... 64 1e-10
gi|190341093 fibroblast growth factor binding protein 3 [Homo sa... 62 3e-10
gi|10092601 eukaryotic translation initiation factor 4 gamma, 3 ... 35 0.051
gi|27436893 tapasin isoform 1 precursor [Homo sapiens] 35 0.067
gi|27436897 tapasin isoform 3 precursor [Homo sapiens] 35 0.067
gi|27436895 tapasin isoform 2 precursor [Homo sapiens] 35 0.067
gi|122937321 UNC homeobox [Homo sapiens] 35 0.067
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 35 0.067
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ... 35 0.067
gi|38201621 eukaryotic translation initiation factor 4 gamma, 1 ... 34 0.088
gi|38201627 eukaryotic translation initiation factor 4 gamma, 1 ... 34 0.088
gi|38201623 eukaryotic translation initiation factor 4 gamma, 1 ... 34 0.088
gi|50345997 E1A binding protein p300 [Homo sapiens] 34 0.11
gi|169213985 PREDICTED: similar to hCG2036794 [Homo sapiens] 33 0.20
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 33 0.20
gi|239751846 PREDICTED: similar to hCG2036794 [Homo sapiens] 33 0.20
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 33 0.20
gi|239746337 PREDICTED: similar to hCG2036794 [Homo sapiens] 33 0.20
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 33 0.20
gi|130502140 NEZHA isoform 2 [Homo sapiens] 33 0.20
gi|122937255 NEZHA isoform 1 [Homo sapiens] 33 0.20
gi|68348711 tumor necrosis factor receptor superfamily, member 8... 33 0.26
gi|19924099 synapsin I isoform Ia [Homo sapiens] 33 0.26
gi|19924097 synapsin I isoform Ib [Homo sapiens] 33 0.26
gi|150170670 piccolo isoform 2 [Homo sapiens] 33 0.26
gi|150378539 piccolo isoform 1 [Homo sapiens] 33 0.26
gi|46397392 pogo transposable element with ZNF domain isoform 3 ... 32 0.33
gi|46397390 pogo transposable element with ZNF domain isoform 1 ... 32 0.33
gi|46397394 pogo transposable element with ZNF domain isoform 2 ... 32 0.33
>gi|13994345 killer-specific secretory protein of 37 kDa precursor
[Homo sapiens]
Length = 223
Score = 476 bits (1225), Expect = e-135
Identities = 223/223 (100%), Positives = 223/223 (100%)
Query: 1 MKFVPCLLLVTLSCLGTLGQAPRQKQGSTGEEFHFQTGGRDSCTMRPSSLGQGAGEVWLR 60
MKFVPCLLLVTLSCLGTLGQAPRQKQGSTGEEFHFQTGGRDSCTMRPSSLGQGAGEVWLR
Sbjct: 1 MKFVPCLLLVTLSCLGTLGQAPRQKQGSTGEEFHFQTGGRDSCTMRPSSLGQGAGEVWLR 60
Query: 61 VDCRNTDQTYWCEYRGQPSMCQAFAADPKPYWNQALQELRRLHHACQGAPVLRPSVCREA 120
VDCRNTDQTYWCEYRGQPSMCQAFAADPKPYWNQALQELRRLHHACQGAPVLRPSVCREA
Sbjct: 61 VDCRNTDQTYWCEYRGQPSMCQAFAADPKPYWNQALQELRRLHHACQGAPVLRPSVCREA 120
Query: 121 GPQAHMQQVTSSLKGSPEPNQQPEAGTPSLRPKATVKLTEATQLGKDSMEELGKAKPTTR 180
GPQAHMQQVTSSLKGSPEPNQQPEAGTPSLRPKATVKLTEATQLGKDSMEELGKAKPTTR
Sbjct: 121 GPQAHMQQVTSSLKGSPEPNQQPEAGTPSLRPKATVKLTEATQLGKDSMEELGKAKPTTR 180
Query: 181 PTAKPTQPGPRPGGNEEAKKKAWEHCWKPFQALCAFLISFFRG 223
PTAKPTQPGPRPGGNEEAKKKAWEHCWKPFQALCAFLISFFRG
Sbjct: 181 PTAKPTQPGPRPGGNEEAKKKAWEHCWKPFQALCAFLISFFRG 223
>gi|4826754 fibroblast growth factor binding protein 1 [Homo
sapiens]
Length = 234
Score = 63.9 bits (154), Expect = 1e-10
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 19/204 (9%)
Query: 17 TLGQAPRQKQGSTGEEFHFQTGGRDSCTMRPSSLGQGAGEVWLRVDCRNTDQTYWCEYRG 76
TLG +++ G + F T + +C + +G + L+V+C D + C + G
Sbjct: 42 TLGNTQIKQKSRPGNKGKFVTKDQANCRWAATEQEEG---ISLKVECTQLDHEFSCVFAG 98
Query: 77 QPSMCQAFAADPKPYWNQALQELRRLHHACQ-GAPVLRPSVCREAGPQAHMQQVTSSLKG 135
P+ C D + YW Q + LR C+ ++ VCR+ P++ ++ V+S+L G
Sbjct: 99 NPTSCLKL-KDERVYWKQVARNLRSQKDICRYSKTAVKTRVCRKDFPESSLKLVSSTLFG 157
Query: 136 SPEPNQQPEAGTPSLRPKATVKLTEATQLGKDSMEELGKAKPTTRPTAKPTQPGPRPGGN 195
+ +P ++ + P+ +K E T A T T P N
Sbjct: 158 NTKPRKE----KTEMSPREHIKGKETT--------PSSLAVTQTMATKAPECVEDPDMAN 205
Query: 196 EEAKKKAWEHCWKPFQALCAFLIS 219
+ +K A E C + + +LC F +S
Sbjct: 206 Q--RKTALEFCGETWSSLCTFFLS 227
>gi|190341093 fibroblast growth factor binding protein 3 [Homo
sapiens]
Length = 258
Score = 62.4 bits (150), Expect = 3e-10
Identities = 61/258 (23%), Positives = 92/258 (35%), Gaps = 50/258 (19%)
Query: 5 PCLLLVTLSCLGTLGQAPRQKQGSTGEEFHFQTGGRDSCTMRPSSLG----------QGA 54
P LLL+ CL + + + E TGG + P + A
Sbjct: 12 PSLLLLLSGCLLAAARREKGAASNVAEPVPGPTGGSSGRFLSPEQHACSWQLLLPAPEAA 71
Query: 55 GEVWLRVDCRNTDQT-YWCEYRGQPSMCQAFAADPKPYWNQALQELRRLHHACQGAPVLR 113
L + C++ D + C YRG P C A+AA +W Q L LR+ C L+
Sbjct: 72 AGSELALRCQSPDGARHQCAYRGHPERCAAYAARRAHFWKQVLGGLRKKRRPCHDPAPLQ 131
Query: 114 PSVCREAGPQAHMQQVTSSLKGSP------------------------EPNQQPEAGTP- 148
+C AG + H ++ + SP E P AGTP
Sbjct: 132 ARLC--AGKKGHGAELRLVPRASPPARPTVAGFAGESKPRARNRGRTRERASGPAAGTPP 189
Query: 149 --SLRPKATVKLTEATQLGKDSMEELGKAKPTTRPT-AKPTQPGPRPGGNEEAKKKAWEH 205
S PK + + GK K P +P GP P G + + +
Sbjct: 190 PQSAPPKENPSERKTNE---------GKRKAALVPNEERPMGTGPDPDGLDGNAELTETY 240
Query: 206 CWKPFQALCAFLISFFRG 223
C + + +LC F ++F+ G
Sbjct: 241 CAEKWHSLCNFFVNFWNG 258
>gi|10092601 eukaryotic translation initiation factor 4 gamma, 3
[Homo sapiens]
Length = 1585
Score = 35.0 bits (79), Expect = 0.051
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 10/59 (16%)
Query: 141 QQPEAGTPSLRPKATVKLTEATQLGKDSMEEL----GKAKPTT---RPTAKPTQPGPRP 192
QQP P+ R K T+++ + Q GKD EE+ G PT RPT+ PT P P
Sbjct: 130 QQPP---PAKREKKTIRIRDPNQGGKDITEEIMSGGGSRNPTPPIGRPTSTPTPPQQLP 185
>gi|27436893 tapasin isoform 1 precursor [Homo sapiens]
Length = 448
Score = 34.7 bits (78), Expect = 0.067
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 13/76 (17%)
Query: 129 VTSSLKGSPEPNQQPEAGTPSLRPKATVKLTEAT-------QLGKDSMEELGKA-KPTTR 180
++S L+ PEP Q+ P L ATV LT T +LG+D++ +L A P T
Sbjct: 135 LSSLLRPQPEPQQE-----PVLITMATVVLTVLTHTPAPRVRLGQDALLDLSFAYMPPTS 189
Query: 181 PTAKPTQPGPRPGGNE 196
A PGP P G E
Sbjct: 190 EAASSLAPGPPPFGLE 205
>gi|27436897 tapasin isoform 3 precursor [Homo sapiens]
Length = 412
Score = 34.7 bits (78), Expect = 0.067
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 13/76 (17%)
Query: 129 VTSSLKGSPEPNQQPEAGTPSLRPKATVKLTEAT-------QLGKDSMEELGKA-KPTTR 180
++S L+ PEP Q+ P L ATV LT T +LG+D++ +L A P T
Sbjct: 135 LSSLLRPQPEPQQE-----PVLITMATVVLTVLTHTPAPRVRLGQDALLDLSFAYMPPTS 189
Query: 181 PTAKPTQPGPRPGGNE 196
A PGP P G E
Sbjct: 190 EAASSLAPGPPPFGLE 205
>gi|27436895 tapasin isoform 2 precursor [Homo sapiens]
Length = 299
Score = 34.7 bits (78), Expect = 0.067
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 13/76 (17%)
Query: 129 VTSSLKGSPEPNQQPEAGTPSLRPKATVKLTEAT-------QLGKDSMEELGKA-KPTTR 180
++S L+ PEP Q+ P L ATV LT T +LG+D++ +L A P T
Sbjct: 135 LSSLLRPQPEPQQE-----PVLITMATVVLTVLTHTPAPRVRLGQDALLDLSFAYMPPTS 189
Query: 181 PTAKPTQPGPRPGGNE 196
A PGP P G E
Sbjct: 190 EAASSLAPGPPPFGLE 205
>gi|122937321 UNC homeobox [Homo sapiens]
Length = 531
Score = 34.7 bits (78), Expect = 0.067
Identities = 19/57 (33%), Positives = 25/57 (43%)
Query: 136 SPEPNQQPEAGTPSLRPKATVKLTEATQLGKDSMEELGKAKPTTRPTAKPTQPGPRP 192
SP+ P A P+ P + AT+ G + G A P P A +PGPRP
Sbjct: 443 SPDAVASPGAPAPAPAPFRDLASAAATEGGGGDCADAGTAGPAPPPPAPSPRPGPRP 499
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 34.7 bits (78), Expect = 0.067
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 109 APVLRPSVCREAGPQAHMQQVTSSLKG-SPEPNQQPEAGTPSLRPKATVKLTEATQLGKD 167
+P R S R ++H + K SP P + + TP L P+ +VK+ E +
Sbjct: 181 SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPEL-PEPSVKVKEPSVQEAT 239
Query: 168 SMEELGKAKPTTRPTAKPTQPGPRPGGNEEAKKK 201
S ++ K P P +P +P P +E +K+
Sbjct: 240 STSDILKV-PKPEPIPEPKEPSPEKNSKKEKEKE 272
>gi|112821681 G protein-regulated inducer of neurite outgrowth 1
[Homo sapiens]
Length = 1008
Score = 34.7 bits (78), Expect = 0.067
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 114 PSVCREAGPQAHMQQVTSSLKGSPEPNQQPEAGTPSLRPKAT-VKLTEATQLGKDSMEEL 172
P + P + +Q+ GS + + PKA V TEA+ LG+ +E
Sbjct: 712 PLSLEKTKPSSSSRQLDRKALGSARSPEGARGSEGRVEPKAEPVSSTEASSLGQKDLEAA 771
Query: 173 GKAKPTTRPTAKPTQPGPRPGGNEEAKKKAWE 204
G A+ + P A PGPR N K +WE
Sbjct: 772 G-AERSPCPEAAAPPPGPRTRDN-FTKAPSWE 801
>gi|38201621 eukaryotic translation initiation factor 4 gamma, 1
isoform 1 [Homo sapiens]
Length = 1599
Score = 34.3 bits (77), Expect = 0.088
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 122 PQAHMQQVTSSLKGSPEPNQQPEAGTPSLRPKATVKLTEATQLGKDSMEE-LGKAKPTTR 180
P +QQ + + +P QP P R + T+++ + Q GKD EE + A+ +
Sbjct: 147 PAQGVQQFPTGVAPAPVLMNQPPQIAPK-RERKTIRIRDPNQGGKDITEEIMSGARTAST 205
Query: 181 PTAKPTQPGPRPGGNEEAKKKA 202
PT T G P N E + A
Sbjct: 206 PTPPQTGGGLEPQANGETPQVA 227
>gi|38201627 eukaryotic translation initiation factor 4 gamma, 1
isoform 2 [Homo sapiens]
Length = 1512
Score = 34.3 bits (77), Expect = 0.088
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 122 PQAHMQQVTSSLKGSPEPNQQPEAGTPSLRPKATVKLTEATQLGKDSMEE-LGKAKPTTR 180
P +QQ + + +P QP P R + T+++ + Q GKD EE + A+ +
Sbjct: 60 PAQGVQQFPTGVAPAPVLMNQPPQIAPK-RERKTIRIRDPNQGGKDITEEIMSGARTAST 118
Query: 181 PTAKPTQPGPRPGGNEEAKKKA 202
PT T G P N E + A
Sbjct: 119 PTPPQTGGGLEPQANGETPQVA 140
>gi|38201623 eukaryotic translation initiation factor 4 gamma, 1
isoform 1 [Homo sapiens]
Length = 1599
Score = 34.3 bits (77), Expect = 0.088
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 122 PQAHMQQVTSSLKGSPEPNQQPEAGTPSLRPKATVKLTEATQLGKDSMEE-LGKAKPTTR 180
P +QQ + + +P QP P R + T+++ + Q GKD EE + A+ +
Sbjct: 147 PAQGVQQFPTGVAPAPVLMNQPPQIAPK-RERKTIRIRDPNQGGKDITEEIMSGARTAST 205
Query: 181 PTAKPTQPGPRPGGNEEAKKKA 202
PT T G P N E + A
Sbjct: 206 PTPPQTGGGLEPQANGETPQVA 227
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 33.9 bits (76), Expect = 0.11
Identities = 34/130 (26%), Positives = 51/130 (39%), Gaps = 21/130 (16%)
Query: 88 PKPYWNQALQELRR--LHHACQGAPVLRPSVC--REAGPQAHMQQVTSSLKGSP------ 137
P P+ Q+LR+ L H Q A +LR + + G Q + S +P
Sbjct: 1802 PVPFCLNIKQKLRQQQLQHRLQQAQMLRRRMASMQRTGVVGQQQGLPSPTPATPTTPTGQ 1861
Query: 138 --------EPNQQPEAGTPSLRPKATVKLTEATQLGKDSMEELGKAKPTTRP-TAKPTQP 188
+P QP+ P+ P + A + + + G+ P T P TA+P P
Sbjct: 1862 QPTTPQTPQPTSQPQPTPPNSMPPYLPRTQAAGPVSQG--KAAGQVTPPTPPQTAQPPLP 1919
Query: 189 GPRPGGNEEA 198
GP P E A
Sbjct: 1920 GPPPAAVEMA 1929
>gi|169213985 PREDICTED: similar to hCG2036794 [Homo sapiens]
Length = 518
Score = 33.1 bits (74), Expect = 0.20
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 16/107 (14%)
Query: 101 RLHHACQGAPVLRPS-----VCREAGPQAHMQQVTSSLKGSPEPNQQPEAGTPSLRPKA- 154
RL+ G P PS V E P + + L+ +P P + PE PKA
Sbjct: 56 RLNPEFPGTPYPEPSKLPHTVSLETFPLDFTEPLNPDLRETPHP-ESPET------PKAD 108
Query: 155 --TVKLTEATQLGKDSMEELGKAKPTTRPTAKPTQPGPRPGGNEEAK 199
T ++E+ + K ++ ++ + + PT PT+ P PG E K
Sbjct: 109 SLTTSISESLDMPKTNLSKMAHPESSETPTPGPTEM-PHPGSPETPK 154
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 33.1 bits (74), Expect = 0.20
Identities = 48/183 (26%), Positives = 68/183 (37%), Gaps = 20/183 (10%)
Query: 20 QAPRQKQGSTGEEFHFQTGGRDSCTMRPSSLGQGAGEVWLRVDCRNTDQTYWCEYRGQPS 79
+AP K S G + GR S T RP LGQ LR+ T + S
Sbjct: 102 RAPPAKNTSPGP---VSSPGRASGTTRPGPLGQKG----LRISAEETVARGKATEAPKRS 154
Query: 80 MCQAFA---------ADPKPYWNQALQELRRLHHACQGAPVLRPSVCREAGPQAHMQQVT 130
A A P P + + + AP RP E GP+ + +
Sbjct: 155 ALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTE-GPRKSVSSAS 213
Query: 131 --SSLKGSPEPNQQPEAGTPSLRPKATVKLTEATQLGKDSMEELGKAKPTTRPTAKPTQP 188
S+ + SP ++P AG RP + + AT L + A+ T R A P+QP
Sbjct: 214 EHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSG-PSARGTPRAPAHPSQP 272
Query: 189 GPR 191
P+
Sbjct: 273 KPK 275
>gi|239751846 PREDICTED: similar to hCG2036794 [Homo sapiens]
Length = 518
Score = 33.1 bits (74), Expect = 0.20
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 16/107 (14%)
Query: 101 RLHHACQGAPVLRPS-----VCREAGPQAHMQQVTSSLKGSPEPNQQPEAGTPSLRPKA- 154
RL+ G P PS V E P + + L+ +P P + PE PKA
Sbjct: 56 RLNPEFPGTPYPEPSKLPHTVSLETFPLDFTEPLNPDLRETPHP-ESPET------PKAD 108
Query: 155 --TVKLTEATQLGKDSMEELGKAKPTTRPTAKPTQPGPRPGGNEEAK 199
T ++E+ + K ++ ++ + + PT PT+ P PG E K
Sbjct: 109 SLTTSISESLDMPKTNLSKMAHPESSETPTPGPTEM-PHPGSPETPK 154
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 33.1 bits (74), Expect = 0.20
Identities = 48/183 (26%), Positives = 68/183 (37%), Gaps = 20/183 (10%)
Query: 20 QAPRQKQGSTGEEFHFQTGGRDSCTMRPSSLGQGAGEVWLRVDCRNTDQTYWCEYRGQPS 79
+AP K S G + GR S T RP LGQ LR+ T + S
Sbjct: 102 RAPPAKNTSPGP---VSSPGRASGTTRPGPLGQKG----LRISAEETVARGKATEAPKRS 154
Query: 80 MCQAFA---------ADPKPYWNQALQELRRLHHACQGAPVLRPSVCREAGPQAHMQQVT 130
A A P P + + + AP RP E GP+ + +
Sbjct: 155 ALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTE-GPRKSVSSAS 213
Query: 131 --SSLKGSPEPNQQPEAGTPSLRPKATVKLTEATQLGKDSMEELGKAKPTTRPTAKPTQP 188
S+ + SP ++P AG RP + + AT L + A+ T R A P+QP
Sbjct: 214 EHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSG-PSARGTPRAPAHPSQP 272
Query: 189 GPR 191
P+
Sbjct: 273 KPK 275
>gi|239746337 PREDICTED: similar to hCG2036794 [Homo sapiens]
Length = 518
Score = 33.1 bits (74), Expect = 0.20
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 16/107 (14%)
Query: 101 RLHHACQGAPVLRPS-----VCREAGPQAHMQQVTSSLKGSPEPNQQPEAGTPSLRPKA- 154
RL+ G P PS V E P + + L+ +P P + PE PKA
Sbjct: 56 RLNPEFPGTPYPEPSKLPHTVSLETFPLDFTEPLNPDLRETPHP-ESPET------PKAD 108
Query: 155 --TVKLTEATQLGKDSMEELGKAKPTTRPTAKPTQPGPRPGGNEEAK 199
T ++E+ + K ++ ++ + + PT PT+ P PG E K
Sbjct: 109 SLTTSISESLDMPKTNLSKMAHPESSETPTPGPTEM-PHPGSPETPK 154
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 33.1 bits (74), Expect = 0.20
Identities = 48/183 (26%), Positives = 68/183 (37%), Gaps = 20/183 (10%)
Query: 20 QAPRQKQGSTGEEFHFQTGGRDSCTMRPSSLGQGAGEVWLRVDCRNTDQTYWCEYRGQPS 79
+AP K S G + GR S T RP LGQ LR+ T + S
Sbjct: 93 RAPPAKNTSPGP---VSSPGRASGTTRPGPLGQKG----LRISAEETVARGKATEAPKRS 145
Query: 80 MCQAFA---------ADPKPYWNQALQELRRLHHACQGAPVLRPSVCREAGPQAHMQQVT 130
A A P P + + + AP RP E GP+ + +
Sbjct: 146 ALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTE-GPRKSVSSAS 204
Query: 131 --SSLKGSPEPNQQPEAGTPSLRPKATVKLTEATQLGKDSMEELGKAKPTTRPTAKPTQP 188
S+ + SP ++P AG RP + + AT L + A+ T R A P+QP
Sbjct: 205 EHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSG-PSARGTPRAPAHPSQP 263
Query: 189 GPR 191
P+
Sbjct: 264 KPK 266
>gi|130502140 NEZHA isoform 2 [Homo sapiens]
Length = 1249
Score = 33.1 bits (74), Expect = 0.20
Identities = 28/100 (28%), Positives = 37/100 (37%), Gaps = 21/100 (21%)
Query: 113 RPSVCREAGPQAHMQQVTSSLKGSPEPNQQPEAG------------------TP-SLRPK 153
R + GPQ+ ++ T SLK SP + G TP L
Sbjct: 357 RHPLLSSGGPQSPLRGSTGSLKSSPSMSHMEALGKAWNRQLSRPLSQAVSFSTPFGLDSD 416
Query: 154 ATVKLTEATQLGKDSMEELGKAKPTTRPTAKPTQPGPRPG 193
V + + L S + LG +P P PTQP P PG
Sbjct: 417 VDVVMGDPVLLRSVSSDSLGPPRPA--PARTPTQPPPEPG 454
>gi|122937255 NEZHA isoform 1 [Homo sapiens]
Length = 1276
Score = 33.1 bits (74), Expect = 0.20
Identities = 28/100 (28%), Positives = 37/100 (37%), Gaps = 21/100 (21%)
Query: 113 RPSVCREAGPQAHMQQVTSSLKGSPEPNQQPEAG------------------TP-SLRPK 153
R + GPQ+ ++ T SLK SP + G TP L
Sbjct: 384 RHPLLSSGGPQSPLRGSTGSLKSSPSMSHMEALGKAWNRQLSRPLSQAVSFSTPFGLDSD 443
Query: 154 ATVKLTEATQLGKDSMEELGKAKPTTRPTAKPTQPGPRPG 193
V + + L S + LG +P P PTQP P PG
Sbjct: 444 VDVVMGDPVLLRSVSSDSLGPPRPA--PARTPTQPPPEPG 481
>gi|68348711 tumor necrosis factor receptor superfamily, member 8
isoform 1 precursor [Homo sapiens]
Length = 595
Score = 32.7 bits (73), Expect = 0.26
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 24/99 (24%)
Query: 115 SVCREAGPQAHMQQVTSSLKGSPEPNQQPEAGT----------PSLRPKATVKLTEATQL 164
+VC A P S SPE ++P +GT P+ +T+ + T+L
Sbjct: 147 TVCEPASPGV------SPACASPENCKEPSSGTIPQAKPTPVSPATSSASTMPVRGGTRL 200
Query: 165 GKDSMEELGKA--------KPTTRPTAKPTQPGPRPGGN 195
+++ +L +A +P++ P PTQP P G+
Sbjct: 201 AQEAASKLTRAPDSPSSVGRPSSDPGLSPTQPCPEGSGD 239
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 32.7 bits (73), Expect = 0.26
Identities = 31/107 (28%), Positives = 39/107 (36%), Gaps = 17/107 (15%)
Query: 110 PVLRPSVCREAGPQAHMQQVTSSLKGSPE-----PNQQPEAGTPSLRPKATVKLTEATQL 164
P PS R+AGP +Q + S P+ P Q G P P +A+Q
Sbjct: 548 PPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQA 607
Query: 165 GKDSMEELGKAKPTTRPTAKPTQPGPRPGGNEEAKKKAWEHCWKPFQ 211
G P R T PT PRP G A + + KP Q
Sbjct: 608 G-----------PVPR-TGPPTTQQPRPSGPGPAGRPKPQLAQKPSQ 642
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 32.7 bits (73), Expect = 0.26
Identities = 31/107 (28%), Positives = 39/107 (36%), Gaps = 17/107 (15%)
Query: 110 PVLRPSVCREAGPQAHMQQVTSSLKGSPE-----PNQQPEAGTPSLRPKATVKLTEATQL 164
P PS R+AGP +Q + S P+ P Q G P P +A+Q
Sbjct: 548 PPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQA 607
Query: 165 GKDSMEELGKAKPTTRPTAKPTQPGPRPGGNEEAKKKAWEHCWKPFQ 211
G P R T PT PRP G A + + KP Q
Sbjct: 608 G-----------PVPR-TGPPTTQQPRPSGPGPAGRPKPQLAQKPSQ 642
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 32.7 bits (73), Expect = 0.26
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 13/107 (12%)
Query: 118 REAGPQAHMQQVTSSLKGSPE-------PNQQP-EAGTPSLRPKATVKLTEATQLGKDSM 169
++ GP Q+ K P+ P QQP A PS +P +T + K S
Sbjct: 462 QQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSP 521
Query: 170 EELGKAKPTTRP--TAKPT--QPGP-RPGGNEEAKKKAWEHCWKPFQ 211
++ G KP ++ +AKP+ QP P +P + K + KP Q
Sbjct: 522 QQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQ 568
Score = 30.8 bits (68), Expect = 0.97
Identities = 18/61 (29%), Positives = 25/61 (40%)
Query: 139 PNQQPEAGTPSLRPKATVKLTEATQLGKDSMEELGKAKPTTRPTAKPTQPGPRPGGNEEA 198
P QQ + PS L + +GK ++ G AKP T+ P +PG A
Sbjct: 372 PAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPA 431
Query: 199 K 199
K
Sbjct: 432 K 432
Score = 30.8 bits (68), Expect = 0.97
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 118 REAGPQAHMQQVTSSLKGSPEPNQQPEAGTPSLRPKATVKLTEATQLGKDSMEELGKAKP 177
++ GP Q S K P+QQP + PS + + K + Q + + G KP
Sbjct: 512 QQPGPAKPSPQQPGSTK---PPSQQPGSAKPSAQQPSPAK--PSAQQSTKPVSQTGSGKP 566
Query: 178 TTRPTAKPTQPGPRPGG 194
PT P+ P G
Sbjct: 567 LQPPTVSPSAKQPPSQG 583
Score = 28.5 bits (62), Expect = 4.8
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 9/102 (8%)
Query: 109 APVLRPSVCREAGPQAHMQQVTSSLKGSPEPNQQPEAGTPSLRPKATVKLTEATQLGKDS 168
A ++R + + P + G P P QQP G +P + + L K
Sbjct: 286 ADIVRGESVKPSLPSPSKPPIQQPTPGKP-PAQQP--GHEKSQPGPAKPPAQPSGLTKPL 342
Query: 169 MEELGKAKP------TTRPTAKPTQPGPRPGGNEEAKKKAWE 204
++ G KP TT+P A+P P P ++K + E
Sbjct: 343 AQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSE 384
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 32.7 bits (73), Expect = 0.26
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 13/107 (12%)
Query: 118 REAGPQAHMQQVTSSLKGSPE-------PNQQP-EAGTPSLRPKATVKLTEATQLGKDSM 169
++ GP Q+ K P+ P QQP A PS +P +T + K S
Sbjct: 462 QQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSP 521
Query: 170 EELGKAKPTTRP--TAKPT--QPGP-RPGGNEEAKKKAWEHCWKPFQ 211
++ G KP ++ +AKP+ QP P +P + K + KP Q
Sbjct: 522 QQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQ 568
Score = 30.8 bits (68), Expect = 0.97
Identities = 18/61 (29%), Positives = 25/61 (40%)
Query: 139 PNQQPEAGTPSLRPKATVKLTEATQLGKDSMEELGKAKPTTRPTAKPTQPGPRPGGNEEA 198
P QQ + PS L + +GK ++ G AKP T+ P +PG A
Sbjct: 372 PAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPA 431
Query: 199 K 199
K
Sbjct: 432 K 432
Score = 30.8 bits (68), Expect = 0.97
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 118 REAGPQAHMQQVTSSLKGSPEPNQQPEAGTPSLRPKATVKLTEATQLGKDSMEELGKAKP 177
++ GP Q S K P+QQP + PS + + K + Q + + G KP
Sbjct: 512 QQPGPAKPSPQQPGSTK---PPSQQPGSAKPSAQQPSPAK--PSAQQSTKPVSQTGSGKP 566
Query: 178 TTRPTAKPTQPGPRPGG 194
PT P+ P G
Sbjct: 567 LQPPTVSPSAKQPPSQG 583
Score = 28.5 bits (62), Expect = 4.8
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 9/102 (8%)
Query: 109 APVLRPSVCREAGPQAHMQQVTSSLKGSPEPNQQPEAGTPSLRPKATVKLTEATQLGKDS 168
A ++R + + P + G P P QQP G +P + + L K
Sbjct: 286 ADIVRGESVKPSLPSPSKPPIQQPTPGKP-PAQQP--GHEKSQPGPAKPPAQPSGLTKPL 342
Query: 169 MEELGKAKP------TTRPTAKPTQPGPRPGGNEEAKKKAWE 204
++ G KP TT+P A+P P P ++K + E
Sbjct: 343 AQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSE 384
>gi|46397392 pogo transposable element with ZNF domain isoform 3
[Homo sapiens]
Length = 363
Score = 32.3 bits (72), Expect = 0.33
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 137 PEPNQQPEAGTPSLRPKATVKLTEATQLGKDSMEELGKAKPTTRPTAKPTQPGP 190
P+ Q TPS T T+ T LG+ +++ G++ TT P P+ P P
Sbjct: 242 PQSQSQQTKSTPSTSTTPTA--TQPTSLGQLAVQSPGQSNQTTNPKLAPSFPSP 293
>gi|46397390 pogo transposable element with ZNF domain isoform 1
[Homo sapiens]
Length = 1410
Score = 32.3 bits (72), Expect = 0.33
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 137 PEPNQQPEAGTPSLRPKATVKLTEATQLGKDSMEELGKAKPTTRPTAKPTQPGP 190
P+ Q TPS T T+ T LG+ +++ G++ TT P P+ P P
Sbjct: 242 PQSQSQQTKSTPSTSTTPTA--TQPTSLGQLAVQSPGQSNQTTNPKLAPSFPSP 293
>gi|46397394 pogo transposable element with ZNF domain isoform 2
[Homo sapiens]
Length = 1357
Score = 32.3 bits (72), Expect = 0.33
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 137 PEPNQQPEAGTPSLRPKATVKLTEATQLGKDSMEELGKAKPTTRPTAKPTQPGP 190
P+ Q TPS T T+ T LG+ +++ G++ TT P P+ P P
Sbjct: 189 PQSQSQQTKSTPSTSTTPTA--TQPTSLGQLAVQSPGQSNQTTNPKLAPSFPSP 240
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,443,573
Number of Sequences: 37866
Number of extensions: 641363
Number of successful extensions: 3112
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 99
Number of HSP's that attempted gapping in prelim test: 2990
Number of HSP's gapped (non-prelim): 208
length of query: 223
length of database: 18,247,518
effective HSP length: 98
effective length of query: 125
effective length of database: 14,536,650
effective search space: 1817081250
effective search space used: 1817081250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.