POGZ 30253

Name: POGZ	Sequence: fasta or formatted (363aa)		NCBI GI: 46397392
Description: pogo transposable element with ZNF domain isoform 3		Referenced in: DNA Transposon and Retrovirus-related Sequences
Other entries for this name: alt prot [1410aa] pogo transposable element with ZNF domain isoform 1 alt prot [1357aa] pogo transposable element with ZNF domain isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 22 2 C cysteine 0.3 1 1 D aspartate 1.9 7 1 E glutamate 3.0 11 4 F phenylalanine 2.2 8 1 G glycine 6.1 22 2 H histidine 1.1 4 1 I isoleucine 3.9 14 1 K lysine 2.8 10 2 L leucine 5.2 19 1 M methionine 2.2 8 1 N asparagine 6.1 22 3 P proline 10.7 39 2 Q glutamine 8.8 32 2 R arginine 2.5 9 1 S serine 11.6 42 3 T threonine 12.9 47 3 V valine 12.1 44 3 W tryptophan 0.3 1 1 Y tyrosine 0.3 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 pogo transposable element with ZNF domain isoform 3 ... POGZ 0.990 pogo transposable element with ZNF domain isoform 1 ... POGZ 0.781 pogo transposable element with ZNF domain isoform 2 ... LOC100294420 0.052 PREDICTED: similar to mucin 2 ADNP2 0.051 ADNP homeobox 2 MUC5AC 0.044 mucin 5AC PRG4 0.044 proteoglycan 4 isoform D PRG4 0.044 proteoglycan 4 isoform C PRG4 0.044 proteoglycan 4 isoform B PRG4 0.044 proteoglycan 4 isoform A MUC5B 0.044 mucin 5, subtype B, tracheobronchial MUC2 0.041 mucin 2 precursor LOC100131514 0.039 PREDICTED: similar to hCG1747327, partial MUC6 0.038 mucin 6, gastric MUC17 0.036 mucin 17 SAP130 0.035 Sin3A-associated protein, 130kDa isoform b SAP130 0.035 Sin3A-associated protein, 130kDa isoform a LOC284297 0.034 hypothetical protein LOC284297 NCOA6 0.032 nuclear receptor coactivator 6 MUC16 0.031 mucin 16 ANKRD17 0.031 ankyrin repeat domain protein 17 isoform a ANKRD17 0.031 ankyrin repeat domain protein 17 isoform b MUC4 0.028 mucin 4 isoform a MUC12 0.028 PREDICTED: mucin 12 LOC100294236 0.028 PREDICTED: similar to diffuse panbronchiolitis crit... MUC12 0.028 PREDICTED: mucin 12, cell surface associated LOC100131514 0.028 PREDICTED: similar to intestinal mucin MUC3B LOC732156 0.028 PREDICTED: similar to Mucin-3A HCFC1 0.028 host cell factor 1 MED15 0.026 mediator complex subunit 15 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.