Guide to the Human Genome
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Name: FGFBP1 Sequence: fasta or formatted (234aa) NCBI GI: 4826754
Description:

fibroblast growth factor binding protein 1

Referenced in:

Fibroblast Growth Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         13           2
 C cysteine            4.7         11           1
 D aspartate           3.8          9           1
 E glutamate           7.3         17           2
 F phenylalanine       3.8          9           2
 G glycine             4.3         10           1
 H histidine           1.3          3           1
 I isoleucine          2.6          6           1
 K lysine             12.0         28           3
 L leucine             9.4         22           3
 M methionine          1.7          4           1
 N asparagine          3.4          8           1
 P proline             3.4          8           1
 Q glutamine           5.1         12           1
 R arginine            4.7         11           1
 S serine              9.0         21           2
 T threonine           9.0         21           2
 V valine              6.8         16           2
 W tryptophan          1.3          3           1
 Y tyrosine            0.9          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fibroblast growth factor binding protein 1 
FGFBP2                0.087   killer-specific secretory protein of 37 kDa precurso...
FGFBP3                0.060   fibroblast growth factor binding protein 3 
LOC728498             0.020   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728498             0.020   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653125             0.018   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653125             0.018   PREDICTED: similar to Golgin subfamily A member 8-l...
TLE4                  0.018   transducin-like enhancer protein 4 
BTLA                  0.016   B and T lymphocyte associated isoform 2 
LOC653073             0.016   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653073             0.016   PREDICTED: Golgin subfamily A member 8-like protein...
APOB48R               0.016   apolipoprotein B48 receptor 
NSUN2                 0.011   NOL1/NOP2/Sun domain family, member 2 
LOC653720             0.011   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653720             0.011   PREDICTED: similar to Golgin subfamily A member 8-l...
CALD1                 0.011   caldesmon 1 isoform 1 
CDC37L1               0.011   cell division cycle 37 homolog (S. cerevisiae)-like ...
CCDC149               0.011   coiled-coil domain containing 149 isoform 2 
CCDC149               0.011   coiled-coil domain containing 149 isoform 1 
LOC390561             0.011   PREDICTED: similar to hect domain and RLD 2 
PRKCD                 0.009   protein kinase C, delta 
PRKCD                 0.009   protein kinase C, delta 
DNAH1                 0.009   dynein, axonemal, heavy chain 1 
SPOCK2                0.009   sparc/osteonectin, cwcv and kazal-like domains proteo...
PRDM15                0.009   PR domain containing 15 isoform 1 
HUWE1                 0.007   HECT, UBA and WWE domain containing 1 
KDM3B                 0.007   jumonji domain containing 1B 
CIR1                  0.007   CBF1 interacting corepressor 
LOC653061             0.007   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.007   PREDICTED: similar to Golgin subfamily A member 8-l...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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