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Search of human proteins with 7662146
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7662146 DnaJ (Hsp40) homolog, subfamily C, member 6 [Homo
sapiens]
(913 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7662146 DnaJ (Hsp40) homolog, subfamily C, member 6 [Homo sap... 1889 0.0
gi|157384971 cyclin G associated kinase [Homo sapiens] 775 0.0
gi|65288071 tensin 3 [Homo sapiens] 121 3e-27
gi|38787970 tensin like C1 domain containing phosphatase isoform... 120 4e-27
gi|38787957 tensin like C1 domain containing phosphatase isoform... 120 4e-27
gi|38787941 tensin like C1 domain containing phosphatase isoform... 120 4e-27
gi|66529407 tensin [Homo sapiens] 120 8e-27
gi|73765544 phosphatase and tensin homolog [Homo sapiens] 109 1e-23
gi|213972593 TPTE and PTEN homologous inositol lipid phosphatase... 103 1e-21
gi|213972591 TPTE and PTEN homologous inositol lipid phosphatase... 103 1e-21
gi|213972589 TPTE and PTEN homologous inositol lipid phosphatase... 103 1e-21
gi|40549435 transmembrane phosphatase with tensin homology isofo... 97 5e-20
gi|40549433 transmembrane phosphatase with tensin homology isofo... 97 5e-20
gi|109689707 transmembrane phosphatase with tensin homology isof... 97 5e-20
gi|163965366 nascent polypeptide-associated complex alpha subuni... 58 5e-08
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 55 2e-07
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 55 3e-07
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 55 3e-07
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 54 7e-07
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 54 9e-07
gi|54860079 nadrin isoform 1 [Homo sapiens] 52 3e-06
gi|54860105 nadrin isoform 2 [Homo sapiens] 52 3e-06
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 51 4e-06
gi|7662228 synaptosomal-associated protein, 91kDa homolog [Homo ... 51 6e-06
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 51 6e-06
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 50 7e-06
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 49 2e-05
gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens] 49 2e-05
gi|39995080 hypothetical protein LOC79567 [Homo sapiens] 49 2e-05
gi|26051278 nuclear pore membrane protein 121 [Homo sapiens] 47 6e-05
>gi|7662146 DnaJ (Hsp40) homolog, subfamily C, member 6 [Homo
sapiens]
Length = 913
Score = 1889 bits (4892), Expect = 0.0
Identities = 913/913 (100%), Positives = 913/913 (100%)
Query: 1 MKDSENKGASSPDMEPSYGGGLFDMVKGGAGRLFSNLKDNLKDTLKDTSSRVIQSVTSYT 60
MKDSENKGASSPDMEPSYGGGLFDMVKGGAGRLFSNLKDNLKDTLKDTSSRVIQSVTSYT
Sbjct: 1 MKDSENKGASSPDMEPSYGGGLFDMVKGGAGRLFSNLKDNLKDTLKDTSSRVIQSVTSYT 60
Query: 61 KGDLDFTYVTSRIIVMSFPLDNVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSPKSYRTAK 120
KGDLDFTYVTSRIIVMSFPLDNVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSPKSYRTAK
Sbjct: 61 KGDLDFTYVTSRIIVMSFPLDNVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSPKSYRTAK 120
Query: 121 FHSRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFI 180
FHSRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFI
Sbjct: 121 FHSRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFI 180
Query: 181 FCNLYSTPGPAIRLLYAKRPGIGLSPSHRRYLGYMCDLLADKPYRPHFKPLTIKSITVSP 240
FCNLYSTPGPAIRLLYAKRPGIGLSPSHRRYLGYMCDLLADKPYRPHFKPLTIKSITVSP
Sbjct: 181 FCNLYSTPGPAIRLLYAKRPGIGLSPSHRRYLGYMCDLLADKPYRPHFKPLTIKSITVSP 240
Query: 241 IPFFNKQRNGCRPYCDVLIGETKIYSTCTDFERMKEYRVQDGKIFIPLNITVQGDVVVSM 300
IPFFNKQRNGCRPYCDVLIGETKIYSTCTDFERMKEYRVQDGKIFIPLNITVQGDVVVSM
Sbjct: 241 IPFFNKQRNGCRPYCDVLIGETKIYSTCTDFERMKEYRVQDGKIFIPLNITVQGDVVVSM 300
Query: 301 YHLRSTIGSRLQAKVTNTQIFQLQFHTGFIPLDTTVLKFTKPELDACDVPEKYPQLFQVT 360
YHLRSTIGSRLQAKVTNTQIFQLQFHTGFIPLDTTVLKFTKPELDACDVPEKYPQLFQVT
Sbjct: 301 YHLRSTIGSRLQAKVTNTQIFQLQFHTGFIPLDTTVLKFTKPELDACDVPEKYPQLFQVT 360
Query: 361 LDVELQPHDKVIDLTPPWEHYCTKDVNPSILFSSHQEHQDTLALGGQAPIDIPPDNPRHY 420
LDVELQPHDKVIDLTPPWEHYCTKDVNPSILFSSHQEHQDTLALGGQAPIDIPPDNPRHY
Sbjct: 361 LDVELQPHDKVIDLTPPWEHYCTKDVNPSILFSSHQEHQDTLALGGQAPIDIPPDNPRHY 420
Query: 421 GQSGFFASLCWQDQKSEKSFCEEDHAALVNQESEQSDDELLTLSSPHGNANGDKPHGVKK 480
GQSGFFASLCWQDQKSEKSFCEEDHAALVNQESEQSDDELLTLSSPHGNANGDKPHGVKK
Sbjct: 421 GQSGFFASLCWQDQKSEKSFCEEDHAALVNQESEQSDDELLTLSSPHGNANGDKPHGVKK 480
Query: 481 PSKKQQEPAAPPPPEDVDLLGLEGSAMSNSFSPPAAPPTNSELLSDLFGGGGAAGPTQAG 540
PSKKQQEPAAPPPPEDVDLLGLEGSAMSNSFSPPAAPPTNSELLSDLFGGGGAAGPTQAG
Sbjct: 481 PSKKQQEPAAPPPPEDVDLLGLEGSAMSNSFSPPAAPPTNSELLSDLFGGGGAAGPTQAG 540
Query: 541 QSGVEDVFHPSGPASTQSTPRRSATSTSASPTLRVGEGATFDPFGAPSKPSGQDLLGSFL 600
QSGVEDVFHPSGPASTQSTPRRSATSTSASPTLRVGEGATFDPFGAPSKPSGQDLLGSFL
Sbjct: 541 QSGVEDVFHPSGPASTQSTPRRSATSTSASPTLRVGEGATFDPFGAPSKPSGQDLLGSFL 600
Query: 601 NTSSASSDPFLQPTRSPSPTVHASSTPAVNIQPDVSGGWDWHAKPGGFGMGSKSAATSPT 660
NTSSASSDPFLQPTRSPSPTVHASSTPAVNIQPDVSGGWDWHAKPGGFGMGSKSAATSPT
Sbjct: 601 NTSSASSDPFLQPTRSPSPTVHASSTPAVNIQPDVSGGWDWHAKPGGFGMGSKSAATSPT 660
Query: 661 GSSHGTPTHQSKPQTLDPFADLGTLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMGG 720
GSSHGTPTHQSKPQTLDPFADLGTLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMGG
Sbjct: 661 GSSHGTPTHQSKPQTLDPFADLGTLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMGG 720
Query: 721 GWQQGGAYNWQQPQPKPQPSMPHSSPQNRPNYNVSFSAMPGGQNERGKGSSNLEGKQKAA 780
GWQQGGAYNWQQPQPKPQPSMPHSSPQNRPNYNVSFSAMPGGQNERGKGSSNLEGKQKAA
Sbjct: 721 GWQQGGAYNWQQPQPKPQPSMPHSSPQNRPNYNVSFSAMPGGQNERGKGSSNLEGKQKAA 780
Query: 781 DFEDLLSGQGFNAHKDKKGPRTIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTM 840
DFEDLLSGQGFNAHKDKKGPRTIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTM
Sbjct: 781 DFEDLLSGQGFNAHKDKKGPRTIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTM 840
Query: 841 HTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDA 900
HTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDA
Sbjct: 841 HTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDA 900
Query: 901 WSEFENQGQKPLY 913
WSEFENQGQKPLY
Sbjct: 901 WSEFENQGQKPLY 913
>gi|157384971 cyclin G associated kinase [Homo sapiens]
Length = 1311
Score = 775 bits (2000), Expect = 0.0
Identities = 435/981 (44%), Positives = 583/981 (59%), Gaps = 128/981 (13%)
Query: 20 GGLFDMVKGGAGRLFSNLKDNLKDTLKDTSSRVIQSVTSYTKGDLDFTYVTSRIIVMSFP 79
GG D+++GG RLF+NLKD TSS+VIQSV +Y KGDLD +Y+TSRI VMSFP
Sbjct: 372 GGFLDILRGGTERLFTNLKD--------TSSKVIQSVANYAKGDLDISYITSRIAVMSFP 423
Query: 80 LDNVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSPKSYRTAKFHSRVSECSWPIRQAPSLH 139
+ V+ +N ++D+R FLDS+H HY VYNLSP++YR ++FH+RVSEC W R+AP LH
Sbjct: 424 AEGVESALKNNIEDVRLFLDSKHPGHYAVYNLSPRTYRPSRFHNRVSECGWAARRAPHLH 483
Query: 140 NLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFCNLYSTPGPAIRLLYAKR 199
L+ +CRNM+ WL Q+ KNVCVVHC+DGRAAS++ V + FC L+ST A+ + KR
Sbjct: 484 TLYNICRNMHAWLRQDHKNVCVVHCMDGRAASAVAVCSFLCFCRLFSTAEAAVYMFSMKR 543
Query: 200 PGIGLSPSHRRYLGYMCDLLADKPYRPHFKPLTIKSITVSPIPFFNKQRNGCRPYCDVLI 259
G+ PSH+RY+ YMCD++A++P PH KP+ ++++ ++P+P F+KQR+GCRP+C+V +
Sbjct: 544 CPPGIWPSHKRYIEYMCDMVAEEPITPHSKPILVRAVVMTPVPLFSKQRSGCRPFCEVYV 603
Query: 260 GETKIYSTCTDFERMKEYRVQDGKIFIPLNITVQGDVVVSMYHLRSTIGSRLQAKVTNTQ 319
G+ ++ ST ++++M++++++DGK IPL +TVQGDV++ +YH RST+G RLQAK+ + +
Sbjct: 604 GDERVASTSQEYDKMRDFKIEDGKAVIPLGVTVQGDVLIVIYHARSTLGGRLQAKMASMK 663
Query: 320 IFQLQFHTGFIPLDTTVLKFTKPELDACDVPEKYPQLFQVTLDVELQPHDKVIDLTPPWE 379
+FQ+QFHTGF+P + T +KF K +LDACD+ EKYP LFQV L+VE++P D+ PPWE
Sbjct: 664 MFQIQFHTGFVPRNATTVKFAKYDLDACDIQEKYPDLFQVNLEVEVEPRDRPSREAPPWE 723
Query: 380 HYCTKDVNPSILFSSHQEHQDTLALGGQAPIDIPPDNPRHY------------------- 420
+ + +NP ILFSS +E QD L+ G+ + P + Y
Sbjct: 724 NSSMRGLNPKILFSSREEQQDILSKFGKPELPRQPGSTAQYDAGAGSPEAEPTDSDSPPS 783
Query: 421 ---GQSGFFASLCWQDQK-----SEKSFCEEDHAALV--NQESEQSDDELLTLSSPHGNA 470
S F +L WQ++K +E + +E +AL+ ESE SD+ +SS
Sbjct: 784 SSADASRFLHTLDWQEEKEAETGAENASSKESESALMEDRDESEVSDEGGSPISSEGQEP 843
Query: 471 NGD-KPHGVKKPSKKQ------QEPAAPPPP----EDVDLLGLEGSAMSNSFSPP---AA 516
D +P G+ +Q + PA P P + VDLLGL + PP A
Sbjct: 844 RADPEPPGLAAGLVQQDLVFEVETPAVLPEPVPQEDGVDLLGLHSEVGAGPAVPPQACKA 903
Query: 517 PPTNSELLSDLFGGGGAAGPTQAGQSGVEDVF--------HPSGPASTQSTPRRSATSTS 568
P +N++LLS L G P A Q ED+ P+ P S QSTPR
Sbjct: 904 PSSNTDLLSCLLG-----PPEAASQGPPEDLLSEDPLLLASPAPPLSVQSTPRG------ 952
Query: 569 ASPTLRVGEGATFDPFGAPSKPSGQ--------DLLGSFLNTSSASSDP-FLQPTRSPSP 619
G A DPFG SG DL G FLN+ S + P F +P P
Sbjct: 953 -------GPPAAADPFGPLLPSSGNNSQPCSNPDLFGEFLNSDSVTVPPSFPSAHSAPPP 1005
Query: 620 TVHA------------SSTPAVNIQPDVSGGWDWHAKPGGFGMGSKSAATSPTGSSHGTP 667
+ A S A + PD+ GGW + + A P S G P
Sbjct: 1006 SCSADFLHLGDLPGEPSKMTASSSNPDLLGGWAAWTETAASAVAPTPATEGPLFSPGGQP 1065
Query: 668 ------THQSKPQTLDPFADLGTLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMG-G 720
+K Q DPFADLG L S G GFPP K + P G
Sbjct: 1066 APCGSQASWTKSQNPDPFADLGDLSSGL--------QGSPAGFPPGGFIPKTATTPKGSS 1117
Query: 721 GWQ------QGGAYNWQQPQPKPQPSMPHSSPQNRPNYNVSFSAMPGGQNERGKGSSNLE 774
WQ QG ++ PQ KP P + Q RPNY +FS + G + ERG + +
Sbjct: 1118 SWQTSRPPAQGASW---PPQAKPPPK---ACTQPRPNYASNFSVI-GAREERGVRAPSFA 1170
Query: 775 GKQKAA--DFEDLLSGQGFNAHKDKKGPRTIAEMRKEEMAKEMDPEKLKILEWIEGKERN 832
K K + DFEDLLS QGF++ DKKGP+TIAEMRK+++AK+ DP KLK+L+WIEGKERN
Sbjct: 1171 QKPKVSENDFEDLLSNQGFSSRSDKKGPKTIAEMRKQDLAKDTDPLKLKLLDWIEGKERN 1230
Query: 833 IRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKM 892
IRALLST+HTVLW GE++W PVGMADLV PEQVKK YR+AVL VHPDKA GQPYEQ+AKM
Sbjct: 1231 IRALLSTLHTVLWDGESRWTPVGMADLVAPEQVKKHYRRAVLAVHPDKAAGQPYEQHAKM 1290
Query: 893 IFMELNDAWSEFENQGQKPLY 913
IFMELNDAWSEFENQG +PL+
Sbjct: 1291 IFMELNDAWSEFENQGSRPLF 1311
>gi|65288071 tensin 3 [Homo sapiens]
Length = 1445
Score = 121 bits (304), Expect = 3e-27
Identities = 95/366 (25%), Positives = 163/366 (44%), Gaps = 40/366 (10%)
Query: 64 LDFTYVTSRIIVMSFPLDNVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSPKSYRTAKFHS 123
LD TY+T RII +SFP + + + + ++ L S+H D+Y V NLS K Y K +
Sbjct: 7 LDLTYITERIIAVSFPAGCSEESYLHNLQEVTRMLKSKHGDNYLVLNLSEKRYDLTKLNP 66
Query: 124 RVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFCN 183
++ + WP AP L + +C+ +WL N ++V V+HC G+ +++ + F N
Sbjct: 67 KIMDVGWPELHAPPLDKMCTICKAQESWLNSNLQHVVVIHCRGGKGRIGVVISSYMHFTN 126
Query: 184 LYSTPGPAI-----RLLYAKRPGIGLSPSHRRYLGYMCDLLADKPYRPHFKPLTIKSITV 238
+ ++ A+ + Y + + PS +RY+ ++ LL+ + + PL + + +
Sbjct: 127 VSASADQALDRFAMKKFYDDKVSALMQPSQKRYVQFLSGLLSGS-VKMNASPLFLHFVIL 185
Query: 239 SPIPFFNKQRNGCRPYCDVLIGETKIYSTCTDFERMKEYRVQDGKIFIPLNITVQGDVVV 298
P F+ CRP+ + +Y T + E + + P + ++GDV+V
Sbjct: 186 HGTPNFD-TGGVCRPFLKLYQAMQPVY-TSGIYNVGPENPSRICIVIEPAQL-LKGDVMV 242
Query: 299 SMYHLRSTIGSRLQAKVTNTQIFQLQFHTGFIPLDTTVLKFTKPELDACDVPEKYPQLFQ 358
YH + T IF+LQFHTG + L F K +LD +++P +
Sbjct: 243 KCYH-------KKYRSATRDVIFRLQFHTGAV--QGYGLVFGKEDLDNASKDDRFPDYGK 293
Query: 359 VTLDVELQP------------HDKVIDLTPPWEHYCTKDVNPSILFSSHQE-HQDTLALG 405
V L P H ++D Y T D P I + S++ D L
Sbjct: 294 VELVFSATPEKIQGSEHLYNDHGVIVD-------YNTTD--PLIRWDSYENLSADGEVLH 344
Query: 406 GQAPID 411
Q P+D
Sbjct: 345 TQGPVD 350
>gi|38787970 tensin like C1 domain containing phosphatase isoform 3
[Homo sapiens]
Length = 1285
Score = 120 bits (302), Expect = 4e-27
Identities = 93/353 (26%), Positives = 166/353 (47%), Gaps = 28/353 (7%)
Query: 63 DLDFTYVTSRIIVMSFPLDNVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSPKSYRTAKFH 122
DLD TYVT RI+ +FP + R + ++ L S+H D Y ++NLS K + + +
Sbjct: 6 DLDLTYVTERILAAAFPARPDEQRHRGHLRELAHVLQSKHRDKYLLFNLSEKRHDLTRLN 65
Query: 123 SRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFC 182
+V + WP AP L L ++C+ M WL +P++V V++C + ++V A +
Sbjct: 66 PKVQDFGWPELHAPPLDKLCSICKAMETWLSADPQHVVVLYCKGNKGKLGVIVSAYMHYS 125
Query: 183 NLYSTPGPAIRLLYAK-----RPGIGLSPSHRRYLGYMCDLLADKPYRPHFKPLTIKSIT 237
+ + A+ L + + L PS RRY+ Y LL+ R + PL + +
Sbjct: 126 KISAGADQALATLTMRKFCEDKVATELQPSQRRYISYFSGLLSGS-IRMNSSPLFLHYVL 184
Query: 238 VSPIPFFNKQRNGCRPYCDVLIGETKIYSTCTDFERMKEYRVQDGKIFIPLNITVQGDVV 297
+ +P F + G +P+ + +Y+ + + Q I + + ++GDV+
Sbjct: 185 IPMLPAF-EPGTGFQPFLKIYQSMQLVYT--SGVYHIAGPGPQQLCISLEPALLLKGDVM 241
Query: 298 VSMYHLRSTIGSRLQAKVTNTQIFQLQFHTGFIPLDTTVLKFTKPELDACDVPEKYPQLF 357
V+ YH G R T +F++QFHT + L F K +LD E++P F
Sbjct: 242 VTCYHK----GGR---GTDRTLVFRVQFHT--CTIHGPQLTFPKDQLDEAWTDERFP--F 290
Query: 358 QVTLD-VELQPHDKVIDLTPPWEHYCTKDVN---PSILFSSH----QEHQDTL 402
Q +++ V +K+ TP + + D N P++ + S+ Q H+D++
Sbjct: 291 QASVEFVFSSSPEKIKGSTPRNDPSVSVDYNTTEPAVRWDSYENFNQHHEDSV 343
Score = 38.5 bits (88), Expect = 0.029
Identities = 69/326 (21%), Positives = 104/326 (31%), Gaps = 62/326 (19%)
Query: 468 GNANGDKPHGVKKPSKKQQEPAAPPPPEDVDL-LGLEGSAMSNSFSPP-----AAPPTNS 521
G G G P P +PP P+ L + + + P A P ++
Sbjct: 689 GEGRGYPSPGAHSPRAGSISPGSPPYPQSRKLSYEIPTEEGGDRYPLPGHLASAGPLASA 748
Query: 522 ELLSDLFGGGGAAG-------PTQAGQSGVEDVFHPSGPAST-------QSTPRRSATST 567
E L + G +G P A S ++ PS P T +ST R+ S
Sbjct: 749 ESLEPVSWREGPSGHSTLPRSPRDAPCSASSELSGPSTPLHTSSPVQGKESTRRQDTRSP 808
Query: 568 SASPTLRVGEGATFDPFGAPSKPSGQDLLGSFLNTSSASSDPFLQPTRSPSPTVHASSTP 627
+++PT R+ G P ++ + P L P P + +P
Sbjct: 809 TSAPTQRLSPGEALPP----------------VSQAGTGKAPELPSGSGPEPLAPSPVSP 852
Query: 628 AVNIQPDVSGGWDWHAKPGGFGMGSKSAATSPT---GSSHGT-PTHQSKPQTLDPFADLG 683
P W PGG G+ + PT G H + P + D
Sbjct: 853 --TFPPSSPSDWPQERSPGGHSDGASPRSPVPTTLPGLRHAPWQGPRGPPDSPD------ 904
Query: 684 TLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMGGGWQQGGAYNWQQP---------- 733
GS P + PP SSP A P+ + G P
Sbjct: 905 --GSPLTPVPSQMPWLVASPEPPQSSPTPAF--PLAASYDTNGLSQPPLPEKRHLPGPGQ 960
Query: 734 QPKPQPSMPHSSPQNRPNYNVSFSAM 759
QP P SSP +++V+F+ +
Sbjct: 961 QPGPWGPEQASSPARGISHHVTFAPL 986
>gi|38787957 tensin like C1 domain containing phosphatase isoform 2
[Homo sapiens]
Length = 1409
Score = 120 bits (302), Expect = 4e-27
Identities = 93/353 (26%), Positives = 166/353 (47%), Gaps = 28/353 (7%)
Query: 63 DLDFTYVTSRIIVMSFPLDNVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSPKSYRTAKFH 122
DLD TYVT RI+ +FP + R + ++ L S+H D Y ++NLS K + + +
Sbjct: 130 DLDLTYVTERILAAAFPARPDEQRHRGHLRELAHVLQSKHRDKYLLFNLSEKRHDLTRLN 189
Query: 123 SRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFC 182
+V + WP AP L L ++C+ M WL +P++V V++C + ++V A +
Sbjct: 190 PKVQDFGWPELHAPPLDKLCSICKAMETWLSADPQHVVVLYCKGNKGKLGVIVSAYMHYS 249
Query: 183 NLYSTPGPAIRLLYAK-----RPGIGLSPSHRRYLGYMCDLLADKPYRPHFKPLTIKSIT 237
+ + A+ L + + L PS RRY+ Y LL+ R + PL + +
Sbjct: 250 KISAGADQALATLTMRKFCEDKVATELQPSQRRYISYFSGLLSGS-IRMNSSPLFLHYVL 308
Query: 238 VSPIPFFNKQRNGCRPYCDVLIGETKIYSTCTDFERMKEYRVQDGKIFIPLNITVQGDVV 297
+ +P F + G +P+ + +Y+ + + Q I + + ++GDV+
Sbjct: 309 IPMLPAF-EPGTGFQPFLKIYQSMQLVYT--SGVYHIAGPGPQQLCISLEPALLLKGDVM 365
Query: 298 VSMYHLRSTIGSRLQAKVTNTQIFQLQFHTGFIPLDTTVLKFTKPELDACDVPEKYPQLF 357
V+ YH G R T +F++QFHT + L F K +LD E++P F
Sbjct: 366 VTCYHK----GGR---GTDRTLVFRVQFHT--CTIHGPQLTFPKDQLDEAWTDERFP--F 414
Query: 358 QVTLD-VELQPHDKVIDLTPPWEHYCTKDVN---PSILFSSH----QEHQDTL 402
Q +++ V +K+ TP + + D N P++ + S+ Q H+D++
Sbjct: 415 QASVEFVFSSSPEKIKGSTPRNDPSVSVDYNTTEPAVRWDSYENFNQHHEDSV 467
Score = 38.5 bits (88), Expect = 0.029
Identities = 69/326 (21%), Positives = 104/326 (31%), Gaps = 62/326 (19%)
Query: 468 GNANGDKPHGVKKPSKKQQEPAAPPPPEDVDL-LGLEGSAMSNSFSPP-----AAPPTNS 521
G G G P P +PP P+ L + + + P A P ++
Sbjct: 813 GEGRGYPSPGAHSPRAGSISPGSPPYPQSRKLSYEIPTEEGGDRYPLPGHLASAGPLASA 872
Query: 522 ELLSDLFGGGGAAG-------PTQAGQSGVEDVFHPSGPAST-------QSTPRRSATST 567
E L + G +G P A S ++ PS P T +ST R+ S
Sbjct: 873 ESLEPVSWREGPSGHSTLPRSPRDAPCSASSELSGPSTPLHTSSPVQGKESTRRQDTRSP 932
Query: 568 SASPTLRVGEGATFDPFGAPSKPSGQDLLGSFLNTSSASSDPFLQPTRSPSPTVHASSTP 627
+++PT R+ G P ++ + P L P P + +P
Sbjct: 933 TSAPTQRLSPGEALPP----------------VSQAGTGKAPELPSGSGPEPLAPSPVSP 976
Query: 628 AVNIQPDVSGGWDWHAKPGGFGMGSKSAATSPT---GSSHGT-PTHQSKPQTLDPFADLG 683
P W PGG G+ + PT G H + P + D
Sbjct: 977 --TFPPSSPSDWPQERSPGGHSDGASPRSPVPTTLPGLRHAPWQGPRGPPDSPD------ 1028
Query: 684 TLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMGGGWQQGGAYNWQQP---------- 733
GS P + PP SSP A P+ + G P
Sbjct: 1029 --GSPLTPVPSQMPWLVASPEPPQSSPTPAF--PLAASYDTNGLSQPPLPEKRHLPGPGQ 1084
Query: 734 QPKPQPSMPHSSPQNRPNYNVSFSAM 759
QP P SSP +++V+F+ +
Sbjct: 1085 QPGPWGPEQASSPARGISHHVTFAPL 1110
>gi|38787941 tensin like C1 domain containing phosphatase isoform 1
[Homo sapiens]
Length = 1419
Score = 120 bits (302), Expect = 4e-27
Identities = 93/353 (26%), Positives = 166/353 (47%), Gaps = 28/353 (7%)
Query: 63 DLDFTYVTSRIIVMSFPLDNVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSPKSYRTAKFH 122
DLD TYVT RI+ +FP + R + ++ L S+H D Y ++NLS K + + +
Sbjct: 140 DLDLTYVTERILAAAFPARPDEQRHRGHLRELAHVLQSKHRDKYLLFNLSEKRHDLTRLN 199
Query: 123 SRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFC 182
+V + WP AP L L ++C+ M WL +P++V V++C + ++V A +
Sbjct: 200 PKVQDFGWPELHAPPLDKLCSICKAMETWLSADPQHVVVLYCKGNKGKLGVIVSAYMHYS 259
Query: 183 NLYSTPGPAIRLLYAK-----RPGIGLSPSHRRYLGYMCDLLADKPYRPHFKPLTIKSIT 237
+ + A+ L + + L PS RRY+ Y LL+ R + PL + +
Sbjct: 260 KISAGADQALATLTMRKFCEDKVATELQPSQRRYISYFSGLLSGS-IRMNSSPLFLHYVL 318
Query: 238 VSPIPFFNKQRNGCRPYCDVLIGETKIYSTCTDFERMKEYRVQDGKIFIPLNITVQGDVV 297
+ +P F + G +P+ + +Y+ + + Q I + + ++GDV+
Sbjct: 319 IPMLPAF-EPGTGFQPFLKIYQSMQLVYT--SGVYHIAGPGPQQLCISLEPALLLKGDVM 375
Query: 298 VSMYHLRSTIGSRLQAKVTNTQIFQLQFHTGFIPLDTTVLKFTKPELDACDVPEKYPQLF 357
V+ YH G R T +F++QFHT + L F K +LD E++P F
Sbjct: 376 VTCYHK----GGR---GTDRTLVFRVQFHT--CTIHGPQLTFPKDQLDEAWTDERFP--F 424
Query: 358 QVTLD-VELQPHDKVIDLTPPWEHYCTKDVN---PSILFSSH----QEHQDTL 402
Q +++ V +K+ TP + + D N P++ + S+ Q H+D++
Sbjct: 425 QASVEFVFSSSPEKIKGSTPRNDPSVSVDYNTTEPAVRWDSYENFNQHHEDSV 477
Score = 38.5 bits (88), Expect = 0.029
Identities = 69/326 (21%), Positives = 104/326 (31%), Gaps = 62/326 (19%)
Query: 468 GNANGDKPHGVKKPSKKQQEPAAPPPPEDVDL-LGLEGSAMSNSFSPP-----AAPPTNS 521
G G G P P +PP P+ L + + + P A P ++
Sbjct: 823 GEGRGYPSPGAHSPRAGSISPGSPPYPQSRKLSYEIPTEEGGDRYPLPGHLASAGPLASA 882
Query: 522 ELLSDLFGGGGAAG-------PTQAGQSGVEDVFHPSGPAST-------QSTPRRSATST 567
E L + G +G P A S ++ PS P T +ST R+ S
Sbjct: 883 ESLEPVSWREGPSGHSTLPRSPRDAPCSASSELSGPSTPLHTSSPVQGKESTRRQDTRSP 942
Query: 568 SASPTLRVGEGATFDPFGAPSKPSGQDLLGSFLNTSSASSDPFLQPTRSPSPTVHASSTP 627
+++PT R+ G P ++ + P L P P + +P
Sbjct: 943 TSAPTQRLSPGEALPP----------------VSQAGTGKAPELPSGSGPEPLAPSPVSP 986
Query: 628 AVNIQPDVSGGWDWHAKPGGFGMGSKSAATSPT---GSSHGT-PTHQSKPQTLDPFADLG 683
P W PGG G+ + PT G H + P + D
Sbjct: 987 --TFPPSSPSDWPQERSPGGHSDGASPRSPVPTTLPGLRHAPWQGPRGPPDSPD------ 1038
Query: 684 TLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMGGGWQQGGAYNWQQP---------- 733
GS P + PP SSP A P+ + G P
Sbjct: 1039 --GSPLTPVPSQMPWLVASPEPPQSSPTPAF--PLAASYDTNGLSQPPLPEKRHLPGPGQ 1094
Query: 734 QPKPQPSMPHSSPQNRPNYNVSFSAM 759
QP P SSP +++V+F+ +
Sbjct: 1095 QPGPWGPEQASSPARGISHHVTFAPL 1120
>gi|66529407 tensin [Homo sapiens]
Length = 1735
Score = 120 bits (300), Expect = 8e-27
Identities = 86/303 (28%), Positives = 147/303 (48%), Gaps = 20/303 (6%)
Query: 63 DLDFTYVTSRIIVMSFPLDNVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSPKSYRTAKFH 122
+LD YVT RII +SFP + FR+ + ++ L S+H +Y ++NLS + K H
Sbjct: 12 ELDLVYVTERIIAVSFPSTANEENFRSNLREVAQMLKSKHGGNYLLFNLSERRPDITKLH 71
Query: 123 SRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFC 182
++V E WP P+L + ++C+ M WL +P NV V+H R +++ A +
Sbjct: 72 AKVLEFGWPDLHTPALEKICSICKAMDTWLNADPHNVVVLHNKGNRGRIGVVIAAYMHYS 131
Query: 183 NLYSTPGPAIRLLYAKR------PGIGLSPSHRRYLGYMCDLLADKPYRPHFKPLTIKSI 236
N+ ++ A+ KR IG PS RRY+ Y LL+ + + KPL + +
Sbjct: 132 NISASADQALDRFAMKRFYEDKIVPIG-QPSQRRYVHYFSGLLSGS-IKMNNKPLFLHHV 189
Query: 237 TVSPIPFFNKQRNGCRPYCDVLIGETKIYSTCTDFERMKEYRVQDGKIFIPLNITVQGDV 296
+ IP F + + GCRP+ + +Y+ + + I I + ++GD+
Sbjct: 190 IMHGIPNF-ESKGGCRPFLRIYQAMQPVYT--SGIYNIPGDSQTSVCITIEPGLLLKGDI 246
Query: 297 VVSMYHLRSTIGSRLQAKVTNTQIFQLQFHTGFIPLDTTVLKFTKPELDACDVPEKYPQL 356
++ YH + +R IF++QFHT I D V+ F K +LD +++P+
Sbjct: 247 LLKCYHKKFRSPAR-------DVIFRVQFHTCAIH-DLGVV-FGKEDLDDAFKDDRFPEY 297
Query: 357 FQV 359
+V
Sbjct: 298 GKV 300
>gi|73765544 phosphatase and tensin homolog [Homo sapiens]
Length = 403
Score = 109 bits (273), Expect = 1e-23
Identities = 77/275 (28%), Positives = 132/275 (48%), Gaps = 21/275 (7%)
Query: 63 DLDFTYVTSRIIVMSFPLDNVDIGFRNQVDDIRSFLDSRHLDHYTVYNL-SPKSYRTAKF 121
DLD TY+ II M FP + ++ +RN +DD+ FLDS+H +HY +YNL + + Y TAKF
Sbjct: 22 DLDLTYIYPNIIAMGFPAERLEGVYRNNIDDVVRFLDSKHKNHYKIYNLCAERHYDTAKF 81
Query: 122 HSRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIF 181
+ RV++ + P L + C ++ WL ++ +V +HC G+ + +++ A +
Sbjct: 82 NCRVAQYPFEDHNPPQLELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYLLH 141
Query: 182 CNLYSTPGPAI----RLLYAKRPGIGLSPSHRRYLGYMCDLLADK-PYRPHFKPLTIKSI 236
+ A+ + + G+ + PS RRY+ Y LL + YRP L +
Sbjct: 142 RGKFLKAQEALDFYGEVRTRDKKGVTI-PSQRRYVYYYSYLLKNHLDYRP--VALLFHKM 198
Query: 237 TVSPIPFFNKQRNGCRPYCDVLIGETKIYSTCTDFERMKEYRVQDGKIFIPLNITVQGDV 296
IP F+ C P V + KIYS+ + R ++ + P + V GD+
Sbjct: 199 MFETIPMFS--GGTCNPQFVVCQLKVKIYSSNSGPTRREDKFMY---FEFPQPLPVCGDI 253
Query: 297 VVSMYHLRSTIGSRLQAKVTNTQIFQLQFHTGFIP 331
V +H ++ + + ++F +T FIP
Sbjct: 254 KVEFFHKQNKM-------LKKDKMFHFWVNTFFIP 281
>gi|213972593 TPTE and PTEN homologous inositol lipid phosphatase
isoform delta [Homo sapiens]
Length = 411
Score = 103 bits (256), Expect = 1e-21
Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 11/178 (6%)
Query: 52 VIQSVTSYTKG--DLDFTYVTSRIIVMSFPLDNVDIGFRNQVDDIRSFLDSRHLDHYTVY 109
V ++ YT+ DLD TYVT RII MSFP +RN ++++ FLD +H +HY VY
Sbjct: 94 VSENKRRYTRDGFDLDLTYVTERIIAMSFPSSGRQSFYRNPIEEVVRFLDKKHRNHYRVY 153
Query: 110 NL-SPKSYRTAKFHSRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGR 168
NL S ++Y FH+RVS P+LH + + + W+ Q+ +N+ +HC G+
Sbjct: 154 NLCSERAYDPKHFHNRVSRIMIDDHNVPTLHEMVVFTKEVNEWMAQDLENIVAIHCKGGK 213
Query: 169 AASSILVGAMFIFCNLYSTPGPAIRLLYAKRPGIGLS--------PSHRRYLGYMCDL 218
+ +V A+ I ++ T ++ +R S PS RY+GY +
Sbjct: 214 GRTGTMVCALLIASEIFLTAEESLYYFGERRTNKTHSNKFQGVETPSQNRYVGYFAQV 271
>gi|213972591 TPTE and PTEN homologous inositol lipid phosphatase
isoform gamma [Homo sapiens]
Length = 522
Score = 103 bits (256), Expect = 1e-21
Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 11/178 (6%)
Query: 52 VIQSVTSYTKG--DLDFTYVTSRIIVMSFPLDNVDIGFRNQVDDIRSFLDSRHLDHYTVY 109
V ++ YT+ DLD TYVT RII MSFP +RN ++++ FLD +H +HY VY
Sbjct: 205 VSENKRRYTRDGFDLDLTYVTERIIAMSFPSSGRQSFYRNPIEEVVRFLDKKHRNHYRVY 264
Query: 110 NL-SPKSYRTAKFHSRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGR 168
NL S ++Y FH+RVS P+LH + + + W+ Q+ +N+ +HC G+
Sbjct: 265 NLCSERAYDPKHFHNRVSRIMIDDHNVPTLHEMVVFTKEVNEWMAQDLENIVAIHCKGGK 324
Query: 169 AASSILVGAMFIFCNLYSTPGPAIRLLYAKRPGIGLS--------PSHRRYLGYMCDL 218
+ +V A+ I ++ T ++ +R S PS RY+GY +
Sbjct: 325 GRTGTMVCALLIASEIFLTAEESLYYFGERRTNKTHSNKFQGVETPSQNRYVGYFAQV 382
>gi|213972589 TPTE and PTEN homologous inositol lipid phosphatase
isoform alpha [Homo sapiens]
Length = 445
Score = 103 bits (256), Expect = 1e-21
Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 11/178 (6%)
Query: 52 VIQSVTSYTKG--DLDFTYVTSRIIVMSFPLDNVDIGFRNQVDDIRSFLDSRHLDHYTVY 109
V ++ YT+ DLD TYVT RII MSFP +RN ++++ FLD +H +HY VY
Sbjct: 128 VSENKRRYTRDGFDLDLTYVTERIIAMSFPSSGRQSFYRNPIEEVVRFLDKKHRNHYRVY 187
Query: 110 NL-SPKSYRTAKFHSRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGR 168
NL S ++Y FH+RVS P+LH + + + W+ Q+ +N+ +HC G+
Sbjct: 188 NLCSERAYDPKHFHNRVSRIMIDDHNVPTLHEMVVFTKEVNEWMAQDLENIVAIHCKGGK 247
Query: 169 AASSILVGAMFIFCNLYSTPGPAIRLLYAKRPGIGLS--------PSHRRYLGYMCDL 218
+ +V A+ I ++ T ++ +R S PS RY+GY +
Sbjct: 248 GRTGTMVCALLIASEIFLTAEESLYYFGERRTNKTHSNKFQGVETPSQNRYVGYFAQV 305
>gi|40549435 transmembrane phosphatase with tensin homology isoform
gamma [Homo sapiens]
Length = 513
Score = 97.4 bits (241), Expect = 5e-20
Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 13/180 (7%)
Query: 51 RVIQSVTSYTKG--DLDFTYVTSRIIVMSFPLDNVDIGFRNQVDDIRSFLDSRHLDHYTV 108
RV ++ YT+ DLD TYVT RII MSFP +RN + ++ FLD +H +HY V
Sbjct: 184 RVSENKRRYTRDGFDLDLTYVTERIIAMSFPSSGRQSFYRNPIKEVVRFLDKKHRNHYRV 243
Query: 109 YNL-SPKSYRTAKFHSRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDG 167
YNL S ++Y FH+RV P+LH + + + W+ Q+ +N+ +HC G
Sbjct: 244 YNLCSERAYDPKHFHNRVVRIMIDDHNVPTLHQMVVFTKEVNEWMAQDLENIVAIHCKGG 303
Query: 168 RAASSILVGAMFIFCNLYSTPGPAIRLLYAKR---------PGIGLSPSHRRYLGYMCDL 218
+ +V A I + ST ++ +R G+ +PS +RY+ Y +
Sbjct: 304 TDRTGTMVCAFLIASEICSTAKESLYYFGERRTDKTHSEKFQGVE-TPSQKRYVAYFAQV 362
>gi|40549433 transmembrane phosphatase with tensin homology isoform
beta [Homo sapiens]
Length = 533
Score = 97.4 bits (241), Expect = 5e-20
Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 13/180 (7%)
Query: 51 RVIQSVTSYTKG--DLDFTYVTSRIIVMSFPLDNVDIGFRNQVDDIRSFLDSRHLDHYTV 108
RV ++ YT+ DLD TYVT RII MSFP +RN + ++ FLD +H +HY V
Sbjct: 204 RVSENKRRYTRDGFDLDLTYVTERIIAMSFPSSGRQSFYRNPIKEVVRFLDKKHRNHYRV 263
Query: 109 YNL-SPKSYRTAKFHSRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDG 167
YNL S ++Y FH+RV P+LH + + + W+ Q+ +N+ +HC G
Sbjct: 264 YNLCSERAYDPKHFHNRVVRIMIDDHNVPTLHQMVVFTKEVNEWMAQDLENIVAIHCKGG 323
Query: 168 RAASSILVGAMFIFCNLYSTPGPAIRLLYAKR---------PGIGLSPSHRRYLGYMCDL 218
+ +V A I + ST ++ +R G+ +PS +RY+ Y +
Sbjct: 324 TDRTGTMVCAFLIASEICSTAKESLYYFGERRTDKTHSEKFQGVE-TPSQKRYVAYFAQV 382
>gi|109689707 transmembrane phosphatase with tensin homology isoform
alpha [Homo sapiens]
Length = 551
Score = 97.4 bits (241), Expect = 5e-20
Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 13/180 (7%)
Query: 51 RVIQSVTSYTKG--DLDFTYVTSRIIVMSFPLDNVDIGFRNQVDDIRSFLDSRHLDHYTV 108
RV ++ YT+ DLD TYVT RII MSFP +RN + ++ FLD +H +HY V
Sbjct: 222 RVSENKRRYTRDGFDLDLTYVTERIIAMSFPSSGRQSFYRNPIKEVVRFLDKKHRNHYRV 281
Query: 109 YNL-SPKSYRTAKFHSRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDG 167
YNL S ++Y FH+RV P+LH + + + W+ Q+ +N+ +HC G
Sbjct: 282 YNLCSERAYDPKHFHNRVVRIMIDDHNVPTLHQMVVFTKEVNEWMAQDLENIVAIHCKGG 341
Query: 168 RAASSILVGAMFIFCNLYSTPGPAIRLLYAKR---------PGIGLSPSHRRYLGYMCDL 218
+ +V A I + ST ++ +R G+ +PS +RY+ Y +
Sbjct: 342 TDRTGTMVCAFLIASEICSTAKESLYYFGERRTDKTHSEKFQGVE-TPSQKRYVAYFAQV 400
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 57.8 bits (138), Expect = 5e-08
Identities = 91/364 (25%), Positives = 124/364 (34%), Gaps = 70/364 (19%)
Query: 437 EKSFCEEDHAALVNQESEQSDDELLTLSSPHGNANGD-----KPHGVKKPSKKQQEPA-- 489
E SF E+ + + + T SP G P GV P K+ P+
Sbjct: 832 EASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVV 891
Query: 490 ---------APPPPEDVDLLGLEGSAMSN------------SFSPPAAPPTNSELLSDLF 528
A P P+ L + S+ S SP AP +
Sbjct: 892 NLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPK 951
Query: 529 GGGGAAGPTQAGQSGVEDVFHPSGPASTQSTPRRSATSTSASPTLRVGEGATFDPFGAPS 588
GG P A P G +T S P+ + T +A+P G AT P GAP+
Sbjct: 952 GGPATPSPKWAPTPPAATPPSPKGGPATPS-PKGAPTPPAATPPSPKGGPATPSPKGAPT 1010
Query: 589 -------KPSGQDLLGSF---LNTSSASSDPFLQPTRSPSPT---VHASSTPAVNIQPDV 635
P G F +T A++ P P SP+ T A +TPA + P
Sbjct: 1011 PPAVTPPSPKGSPAATPFPKGASTPPAATPP--SPKGSPAATPLPKGAPTTPAATL-PSP 1067
Query: 636 SGGWDWHAKPGGFGMGSKSAATSPT---GSSHGTPTHQSKPQTLDPFADLGTLGSSSFAS 692
GG A P G + AAT P+ G + +P P P + G L +
Sbjct: 1068 KGG---PATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKG 1124
Query: 693 KPTTPTGL------GGGFPP----LSSPQKASPQPMGGGWQQGGAYNWQQPQPKPQPSMP 742
PTTP G PP ++P P P GG P PK P+ P
Sbjct: 1125 APTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGG---------LATPPPKGAPTTP 1175
Query: 743 HSSP 746
++P
Sbjct: 1176 AATP 1179
Score = 56.6 bits (135), Expect = 1e-07
Identities = 82/294 (27%), Positives = 117/294 (39%), Gaps = 48/294 (16%)
Query: 462 TLSSPHGNANGDKPHGVKKPSKKQQEPAAPPPPEDVDLLGLEGSAMSNSFSPPAAPPTNS 521
T SP G P G A PP P+ GL + + + PAA P +
Sbjct: 1155 TPPSPKGGLATPPPKGAPTTPA-----ATPPSPKG----GLATPSPKGAPTTPAATPPSP 1205
Query: 522 ELLSDLFGGGGAAGPTQAGQSGVEDVFHPS--GPASTQSTPRRSATSTSASPTLRVGEGA 579
+ GG A P+ G PS G +T S P+ + T+ +A+P G A
Sbjct: 1206 K--------GGLATPSPKGAPTTPAATPPSPKGGLATPS-PKGAPTTPAATPPSPKGGPA 1256
Query: 580 TFDPFGAPSKPSGQDLLGSFLNTSSASSDPFLQPTRSPSPTVHASSTPAVNIQPDVSGGW 639
T P GAP+ P A++ P L+ + +P + PAV P GG
Sbjct: 1257 TPPPKGAPTPP--------------AATPPSLKGGLA-TPPHKGAPNPAVVTPPSPKGG- 1300
Query: 640 DWHAKPGGFGMGSKSAATSPTGSSHGTPTHQS--KPQTLDPFADLG--TLGSSSFASK-- 693
+ P G + SP GS GTP + P + P + G TL +++ +SK
Sbjct: 1301 PATSPPKGAPTPPAATPPSPKGSP-GTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGG 1359
Query: 694 PTTPTGLGGGFPPLSSP-QKASPQPMGGGWQQGGAYNWQQPQPKPQPSMPHSSP 746
PTTP+ G PP ++P K P ++G A P PK P+ P P
Sbjct: 1360 PTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAI----PSPKGDPTSPAVIP 1409
Score = 37.4 bits (85), Expect = 0.064
Identities = 70/261 (26%), Positives = 90/261 (34%), Gaps = 46/261 (17%)
Query: 481 PSKKQQEPAAPPPPEDVDLLGLEGSAMSNSFSPPAAPPTNSELLSDLFGGGGAAGPTQAG 540
P K PA PP G S + +PPAA P + + G G P A
Sbjct: 1282 PHKGAPNPAVVTPPSPKG--GPATSPPKGAPTPPAATPPSPK------GSPGTPPPKGA- 1332
Query: 541 QSGVEDVFHPSGPASTQSTPRRSATSTSASPTLRVG-------EGATFDPFGAPSKPSGQ 593
P+ PA T +P+ + T + +P+ + G EG T P PS G
Sbjct: 1333 ---------PTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPT-PPAATPSHKGGP 1382
Query: 594 DLLGSFLNTSSASSDPFLQPTRSPSPTVHASSTPAVNIQPDVSGGWDWHAK-----PGGF 648
+ A P PT SP V S P G +K P
Sbjct: 1383 AMTPPSPKRGPAIPSPKGDPT---SPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVT 1439
Query: 649 GMGSKSA-ATSP------TGSSHGTPTHQS--KPQTLDPFADLGTLGSSSFASKPTTPTG 699
+ K A ATS T SS G PT + P +P A SSS P TP
Sbjct: 1440 PVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAP 1499
Query: 700 LGGGFPPL---SSPQKASPQP 717
+G P SSP++ P
Sbjct: 1500 MGAPTLPAVIPSSPKEVPATP 1520
Score = 34.3 bits (77), Expect = 0.54
Identities = 67/299 (22%), Positives = 96/299 (32%), Gaps = 63/299 (21%)
Query: 481 PSKKQQEPAAPPPPEDVDLLG--LEGSAMSNSFSPPAAPPTNSELLSDLFGGGGAAGPTQ 538
P+ + P AP P L + + S P+ PP T
Sbjct: 702 PTASENCPVAPSPQNTCAPLATLVLAPEIPKSVPSPSLPPAG----------------TP 745
Query: 539 AGQSGVEDVFHPSGPASTQSTPRRSATSTSASPTLRVGEGATFDPFGAPSKPSGQDLLGS 598
G V+ + H S A S+P+ T S + +G +PS P G +
Sbjct: 746 PGTKKVDGISHTSALAPVASSPKECPTEDSGASATASSKGTLTYLADSPS-PLGVSVSPQ 804
Query: 599 F----LNTSSASSDPFLQPTRSPSPTVHASSTP--AVNIQPDVSGGWDWHA--KPGGFGM 650
SA D + SP V AS P +++ Q H+ P G
Sbjct: 805 TKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGA 864
Query: 651 GSKSAAT-------------SPTGSSHGTPTHQSKPQTLDPFADLGTLGSSSFASK---- 693
+ SA T +PT S P + P T P +SS K
Sbjct: 865 PTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARAT 924
Query: 694 ------PTTPTGLGGGFPPLSSPQKASPQPMGGGWQQGGAYNWQQPQPKPQPSMPHSSP 746
P +P+ G PP ++P P P GG P PK P+ P ++P
Sbjct: 925 PAPKGIPASPSPKGAPTPPAATP----PSPKGGP---------ATPSPKWAPTPPAATP 970
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 55.5 bits (132), Expect = 2e-07
Identities = 80/328 (24%), Positives = 100/328 (30%), Gaps = 59/328 (17%)
Query: 449 VNQESEQSDDELLTLSSPHGNA--NGDKPHGVKKPSKKQQEP---------AAPPPPEDV 497
+N++ Q + L +P G G+KP G P K Q P PPPP
Sbjct: 19 LNEDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKP 78
Query: 498 DLLGLEGSAMSNSFSPPAAP----PTNSELLSDLFGGGGAAGPTQAGQSGVEDVFHPSGP 553
+G PP P P + S G GP G G + P P
Sbjct: 79 QGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQG--GNQPQGPPPPP 136
Query: 554 ASTQSTPRRSATSTSASPTLRVGEGATFDPFGAPSKPSGQDLLGSFLNTSSASSDPFLQP 613
Q P + P P KP G G N S +S P P
Sbjct: 137 GKPQGPPPQGGNKPQGPPP--------------PGKPQGPPPQGD--NKSRSSRSP---P 177
Query: 614 TRSPSPTVHASSTPAVNIQPDVSGGWDWHAKPGGFGMGSKSAATSPTGSSHGTPTHQSKP 673
+ P + P P G P G G+K P G G P
Sbjct: 178 GKPQGPPPQGGNQPQ---GPPPPPGKPQGPPPQG---GNKPQGPPPPGKPQGPP------ 225
Query: 674 QTLDPFADLGTLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMGGGWQQGGAYNWQQP 733
P D + + S KP P GG P P PQ G QGG +P
Sbjct: 226 ----PQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQ---GPPPQGG----NKP 274
Query: 734 QPKPQPSMPHSSPQNRPNYNVSFSAMPG 761
Q P P P P + + S + PG
Sbjct: 275 QGPPPPGKPQGPPPQGGSKSRSSRSPPG 302
Score = 50.8 bits (120), Expect = 6e-06
Identities = 76/302 (25%), Positives = 91/302 (30%), Gaps = 37/302 (12%)
Query: 466 PHGNANGDKPHGVKKPSKKQQ--EPAAPPPPEDVDLLGLEGSAMSNSFSPPAAPPTNSEL 523
P G G P G K S + +P PPP +G PP P
Sbjct: 94 PPGKPQGPPPQGDKSRSPRSPPGKPQGPPP---------QGGNQPQGPPPPPGKPQGPPP 144
Query: 524 LSDLFGGGGAAGPTQAGQSGVEDVFHPSGPASTQSTPRRSATSTSASPTLRVGEGATFD- 582
GG GP G+ P GP RS+ S P +G
Sbjct: 145 Q----GGNKPQGPPPPGK--------PQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQ 192
Query: 583 -PFGAPSKPSGQDLLGSFLNTSSAS-SDPFLQPTRSPSPTVHASSTPAVNIQPDVSGGWD 640
P P KP G G P P + + + A S P P GG
Sbjct: 193 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQ 252
Query: 641 WHAKPGGFGMGSKSAATSPTGSSHGT-PTHQSKPQTLDPFADLGTLGSSSFASKPTTPTG 699
P G K P G + P KPQ P + S S KP P
Sbjct: 253 PQGPPPPPG---KPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPP 309
Query: 700 LGGGFPPLSSPQKASPQPMGGGWQQGGAYNWQQPQPKPQPSMPHSSPQNRPNYNVSFSAM 759
GG P P PQ G QGG +PQ P P P P + + S +
Sbjct: 310 QGGNQPQGPPPPPGKPQ---GPPPQGG----NKPQGPPPPGKPQGPPPQGGSKSRSARSP 362
Query: 760 PG 761
PG
Sbjct: 363 PG 364
Score = 45.8 bits (107), Expect = 2e-04
Identities = 78/303 (25%), Positives = 95/303 (31%), Gaps = 61/303 (20%)
Query: 455 QSDDELLTLSSPHGNANGDKPHGVKKPSKKQQEPAAP--PPPEDVDLLGLEGSAMSNSFS 512
Q D++ + SP G G P G +P P P PPP+ G +
Sbjct: 165 QGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG----GNKPQGPPPPGK 220
Query: 513 PPAAPPT-NSELLSDLFGGGGAAGPTQAGQSGVEDVFHPSGPASTQSTPRRSATSTSASP 571
P PP +++ S G GP G G + P P Q P + P
Sbjct: 221 PQGPPPQGDNKSQSARSPPGKPQGPPPQG--GNQPQGPPPPPGKPQGPPPQGGNKPQGPP 278
Query: 572 TLRVGEGATFDPFGAPSKPSGQDLLGSFLNTSSASSDPFLQPTRSPSPTVHASSTPAVNI 631
P KP G G + SS S P + P + P
Sbjct: 279 P--------------PGKPQGPPPQGGSKSRSSRSP-----PGKPQGPPPQGGNQPQ--- 316
Query: 632 QPDVSGGWDWHAKPGGFGMGSKSAATSPTGSSHGTPTHQSKPQTLDPFADLGTLGSSSFA 691
P G P G G+K P G G P PQ G S S
Sbjct: 317 GPPPPPGKPQGPPPQG---GNKPQGPPPPGKPQGPP-----PQ--------GGSKSRSAR 360
Query: 692 SKPTTPTGLGGGFPPLSSPQKASPQPMGGGWQQGGAYNWQQPQPKP--QPSMPHSSPQ-N 748
S P P G PQ+ P G GG N QQPQ P QP P PQ
Sbjct: 361 SPPGKPQG---------PPQQEGNNPQGPPPPAGG--NPQQPQAPPAGQPQGPPRPPQGG 409
Query: 749 RPN 751
RP+
Sbjct: 410 RPS 412
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 55.1 bits (131), Expect = 3e-07
Identities = 82/336 (24%), Positives = 114/336 (33%), Gaps = 49/336 (14%)
Query: 453 SEQSDDELLTLSSPHGNANGDKPHGVKKPSKKQQEPAAPPPPEDVDLLGLEG---SAMSN 509
S+ S + + + P G PH + S + PP +G++G AM+
Sbjct: 455 SQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAG 514
Query: 510 SFSPPAAPPTNSELLSDLFGGGGAAGPTQAGQSGV--EDVFHPSGPASTQSTPRRSATST 567
P P +G G +G Q GQ + P P Q P +S
Sbjct: 515 MQYPQQQMPPQ-------YGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRY 567
Query: 568 SASPTL-RVGEGATFDPFGAPSKPSGQDLLGSFLNTSSASSDPFLQPTRSPSPT-VHASS 625
+ + G G P AP KP+ +DL + + SS P L + PT A+
Sbjct: 568 QPQQDMSQEGYGTRSQPPLAPGKPNHEDL--NLIQQERPSSLPDLSGSIDDLPTGTEATL 625
Query: 626 TPAVNIQPDVSGGWDWHAKPGGFGMGSKSAATSPTGSSHGTPTHQSKPQTLDPFADLGTL 685
+ AV+ S D + A SP S H +P S P P +
Sbjct: 626 SSAVSASGSTSSQGD-----------QSNPAQSPF-SPHASPHLSSIPGGPSPSPVGSPV 673
Query: 686 GSSSFASKPTTPTGLGGGFPPLSSPQKAS-----------PQPMGGGWQQGGAYNWQQPQ 734
GS+ S P +P + G P P S P P G+ G N Q Q
Sbjct: 674 GSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQ 733
Query: 735 PKPQPSMPHSSPQNRPNYNVSFSAMPGGQNERGKGS 770
PQ + P SP PGGQ G S
Sbjct: 734 YGPQQTGPSMSPH----------PSPGGQMHAGISS 759
Score = 48.1 bits (113), Expect = 4e-05
Identities = 67/258 (25%), Positives = 92/258 (35%), Gaps = 66/258 (25%)
Query: 529 GGGGAAGPTQAGQSGVEDVF--------HPSGPASTQSTPRRSATSTSASPTLRVGEGAT 580
GGGGAA ++A F HPSG +TP + TS SP +R G +
Sbjct: 325 GGGGAASLSKAAAGSAAGGFQRFAGQNQHPSG-----ATPTLNQLLTSPSPMMR-SYGGS 378
Query: 581 FDPFGAPSKP------------------SGQDL-----LGSFLNTSSASSDPFLQPTRSP 617
+ + +PS P GQ LG + A++ P +
Sbjct: 379 YPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQR 438
Query: 618 SPTVHASSTPAVNIQPDVSGGWDWHA--KPGGFGMGSKSAA----TSP-TGSSHGTPTHQ 670
S + TP + D +P +GMGS + +SP G S+G P Q
Sbjct: 439 SHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQ 498
Query: 671 SKPQTLDPFADLGTLGSSSFASKPTTPTGLGG-GFPPLSSPQKASPQPMGGGWQQGGAYN 729
P +G G TP + G +P P + Q + G QQG
Sbjct: 499 RYP--------IGIQGR--------TPGAMAGMQYPQQQMPPQYGQQGVSGYCQQG---- 538
Query: 730 WQQPQPKPQPSMPHSSPQ 747
QQP QP PH PQ
Sbjct: 539 -QQPYYSQQPQPPHLPPQ 555
Score = 41.6 bits (96), Expect = 0.003
Identities = 60/217 (27%), Positives = 83/217 (38%), Gaps = 40/217 (18%)
Query: 529 GGGGAAGPTQAGQSGVEDVFHPSGPASTQSTPRRSATSTSASPTLRVGEGATFDPFGAPS 588
GGG GP G + + S Q ++ + A+PTL +PS
Sbjct: 317 GGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLN-------QLLTSPS 369
Query: 589 KPSGQDLLGSFLNTSSASSDPFLQPTRSPSPTVHASSTPAVNIQPDVSGGWDWHAKPG-G 647
P + GS+ SS S+ P P P+ S A +GG A G G
Sbjct: 370 -PMMRSYGGSYPEYSSPSAPP-------PPPSQPQSQAAAAGA---AAGGQQAAAGMGLG 418
Query: 648 FGMGSKSAATSPTGSSHGTPTHQS-KPQTLDPFADLGTLGSSSFASKPTTPTGL------ 700
MG++ AA SP ++ +H + P T P T+G S P P +
Sbjct: 419 KDMGAQYAAASPAWAAAQQRSHPAMSPGTPGP-----TMGRSQ--GSPMDPMVMKRPQLY 471
Query: 701 GGGFPPLSSPQKASPQPMGGGWQQGGAYNWQQPQPKP 737
G G P S PQ++SP P GG+Y PQ P
Sbjct: 472 GMGSNPHSQPQQSSPYP-------GGSYGPPGPQRYP 501
Score = 39.3 bits (90), Expect = 0.017
Identities = 76/320 (23%), Positives = 108/320 (33%), Gaps = 75/320 (23%)
Query: 484 KQQEPAAPPPP--EDVDLLGLEGSAMSNSFSPPAAPPTNSELLSDLFGGGGAAGPTQAGQ 541
+ Q P AP P ED++L+ E P++ P S + DL G T+A
Sbjct: 581 RSQPPLAPGKPNHEDLNLIQQER---------PSSLPDLSGSIDDLPTG------TEATL 625
Query: 542 SGVEDVFHPSGPASTQSTPRRSATSTSASPTLR-VGEGATFDPFGAP-------SKP-SG 592
S + QS P +S S ASP L + G + P G+P S P S
Sbjct: 626 SSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISP 685
Query: 593 QDLLGSFL------NTSSASSDPFLQPT-------------RSPSPTVHASSTPAVNIQP 633
+ GS + + S +SS P L + R+P + ++ P
Sbjct: 686 ASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSP 745
Query: 634 DVSGGWDWHAKPGGFGMGSKSAATSPTGSSHGTPTHQSKPQTLDPFADLGTLGSSSFASK 693
S G HA F + S P S +G + S+P S S
Sbjct: 746 HPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAY-----------SGVPSA 794
Query: 694 PTTPTGLGGGFPPLSSPQKASP-QPMGGGWQQGGAYNWQQPQPKPQPSMPHSSPQNRP-- 750
+ G G G + P QP G P MP + QNRP
Sbjct: 795 SYSGPGPGMGISANNQMHGQGPSQPCGA---------------VPLGRMPSAGMQNRPFP 839
Query: 751 -NYNVSFSAMPGGQNERGKG 769
N + + PG + G G
Sbjct: 840 GNMSSMTPSSPGMSQQGGPG 859
Score = 31.2 bits (69), Expect = 4.6
Identities = 86/388 (22%), Positives = 125/388 (32%), Gaps = 62/388 (15%)
Query: 412 IPPDNPRHYGQSGFFASLCWQDQKSEKSFCE--EDHAALVNQESEQSDDELLTLSSPHGN 469
+PP P +S +L E+ F + + + +Q+ + SPH +
Sbjct: 693 MPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSM----SPHPS 748
Query: 470 ANGDKPHGVKKPSKKQQEPAAPPPPEDVDLLGLEGSAMSNSFSPPAAPPTNSELLSDLFG 529
G G+ S QQ ++ + G +G N PPA S S
Sbjct: 749 PGGQMHAGI---SSFQQSNSSGTYGPQMSQYGPQG----NYSRPPAYSGVPSASYSGPGP 801
Query: 530 GGGAAGPTQAGQSGVEDVFH-------PSGPASTQSTPRRSATSTSASPTLRVGEGATFD 582
G G + Q G PS + P ++ T +SP + G
Sbjct: 802 GMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMG 861
Query: 583 P---------------FGAPSKPSGQDLLGSF--LNTSS--ASSDPFLQPTRSPSPTVHA 623
P + S Q GSF +N S ASS P+ QP + S ++
Sbjct: 862 PPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNT 921
Query: 624 SSTPAVNIQPDVSGGWDWHAKPGGFGMGSKSAATSP-----TGSSHGTPTHQSKPQTLDP 678
+ P V+ A G M S + P G GTP +SK + D
Sbjct: 922 QAPPYSMAPAMVNSS---AASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKSK--DS 976
Query: 679 FADLGTLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMGGGWQQGGAYNWQQPQPKPQ 738
+ SS S+P TP L P SP AS G + P
Sbjct: 977 Y-------SSQGISQPPTPGNL--PVPSPMSPSSASISSFHGDESD----SISSPGWPKT 1023
Query: 739 PSMPHSSPQNRPNYNVSFSAMPGGQNER 766
PS P SS ++ G + ER
Sbjct: 1024 PSSPKSSSSTTTGEKITKVYELGNEPER 1051
Score = 31.2 bits (69), Expect = 4.6
Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 6/139 (4%)
Query: 484 KQQEPAAPPPPEDVDLLGLEGSAMSNSFSPPAAPPTNSELLSDLFGGGGAAGPTQAGQSG 543
K+Q PP P + L + S + A P + + + G P Q G+S
Sbjct: 1155 KKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSS 1214
Query: 544 VEDVFHPSGPASTQSTPRRSATSTSASPTLRVGEGATF-DPFGAPSKPSGQDLLGSFLNT 602
V P S S P+R+ S +P +G + D G +D G +
Sbjct: 1215 TISVHDPFSDVSDSSFPKRN----SMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGG-MRK 1269
Query: 603 SSASSDPFLQPTRSPSPTV 621
SS+PF+ + P+ ++
Sbjct: 1270 VPGSSEPFMTQGQMPNSSM 1288
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 55.1 bits (131), Expect = 3e-07
Identities = 82/336 (24%), Positives = 114/336 (33%), Gaps = 49/336 (14%)
Query: 453 SEQSDDELLTLSSPHGNANGDKPHGVKKPSKKQQEPAAPPPPEDVDLLGLEG---SAMSN 509
S+ S + + + P G PH + S + PP +G++G AM+
Sbjct: 455 SQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAG 514
Query: 510 SFSPPAAPPTNSELLSDLFGGGGAAGPTQAGQSGV--EDVFHPSGPASTQSTPRRSATST 567
P P +G G +G Q GQ + P P Q P +S
Sbjct: 515 MQYPQQQMPPQ-------YGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRY 567
Query: 568 SASPTL-RVGEGATFDPFGAPSKPSGQDLLGSFLNTSSASSDPFLQPTRSPSPT-VHASS 625
+ + G G P AP KP+ +DL + + SS P L + PT A+
Sbjct: 568 QPQQDMSQEGYGTRSQPPLAPGKPNHEDL--NLIQQERPSSLPDLSGSIDDLPTGTEATL 625
Query: 626 TPAVNIQPDVSGGWDWHAKPGGFGMGSKSAATSPTGSSHGTPTHQSKPQTLDPFADLGTL 685
+ AV+ S D + A SP S H +P S P P +
Sbjct: 626 SSAVSASGSTSSQGD-----------QSNPAQSPF-SPHASPHLSSIPGGPSPSPVGSPV 673
Query: 686 GSSSFASKPTTPTGLGGGFPPLSSPQKAS-----------PQPMGGGWQQGGAYNWQQPQ 734
GS+ S P +P + G P P S P P G+ G N Q Q
Sbjct: 674 GSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQ 733
Query: 735 PKPQPSMPHSSPQNRPNYNVSFSAMPGGQNERGKGS 770
PQ + P SP PGGQ G S
Sbjct: 734 YGPQQTGPSMSPH----------PSPGGQMHAGISS 759
Score = 48.1 bits (113), Expect = 4e-05
Identities = 67/258 (25%), Positives = 92/258 (35%), Gaps = 66/258 (25%)
Query: 529 GGGGAAGPTQAGQSGVEDVF--------HPSGPASTQSTPRRSATSTSASPTLRVGEGAT 580
GGGGAA ++A F HPSG +TP + TS SP +R G +
Sbjct: 325 GGGGAASLSKAAAGSAAGGFQRFAGQNQHPSG-----ATPTLNQLLTSPSPMMR-SYGGS 378
Query: 581 FDPFGAPSKP------------------SGQDL-----LGSFLNTSSASSDPFLQPTRSP 617
+ + +PS P GQ LG + A++ P +
Sbjct: 379 YPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQR 438
Query: 618 SPTVHASSTPAVNIQPDVSGGWDWHA--KPGGFGMGSKSAA----TSP-TGSSHGTPTHQ 670
S + TP + D +P +GMGS + +SP G S+G P Q
Sbjct: 439 SHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQ 498
Query: 671 SKPQTLDPFADLGTLGSSSFASKPTTPTGLGG-GFPPLSSPQKASPQPMGGGWQQGGAYN 729
P +G G TP + G +P P + Q + G QQG
Sbjct: 499 RYP--------IGIQGR--------TPGAMAGMQYPQQQMPPQYGQQGVSGYCQQG---- 538
Query: 730 WQQPQPKPQPSMPHSSPQ 747
QQP QP PH PQ
Sbjct: 539 -QQPYYSQQPQPPHLPPQ 555
Score = 41.6 bits (96), Expect = 0.003
Identities = 60/217 (27%), Positives = 83/217 (38%), Gaps = 40/217 (18%)
Query: 529 GGGGAAGPTQAGQSGVEDVFHPSGPASTQSTPRRSATSTSASPTLRVGEGATFDPFGAPS 588
GGG GP G + + S Q ++ + A+PTL +PS
Sbjct: 317 GGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLN-------QLLTSPS 369
Query: 589 KPSGQDLLGSFLNTSSASSDPFLQPTRSPSPTVHASSTPAVNIQPDVSGGWDWHAKPG-G 647
P + GS+ SS S+ P P P+ S A +GG A G G
Sbjct: 370 -PMMRSYGGSYPEYSSPSAPP-------PPPSQPQSQAAAAGA---AAGGQQAAAGMGLG 418
Query: 648 FGMGSKSAATSPTGSSHGTPTHQS-KPQTLDPFADLGTLGSSSFASKPTTPTGL------ 700
MG++ AA SP ++ +H + P T P T+G S P P +
Sbjct: 419 KDMGAQYAAASPAWAAAQQRSHPAMSPGTPGP-----TMGRSQ--GSPMDPMVMKRPQLY 471
Query: 701 GGGFPPLSSPQKASPQPMGGGWQQGGAYNWQQPQPKP 737
G G P S PQ++SP P GG+Y PQ P
Sbjct: 472 GMGSNPHSQPQQSSPYP-------GGSYGPPGPQRYP 501
Score = 39.3 bits (90), Expect = 0.017
Identities = 76/320 (23%), Positives = 108/320 (33%), Gaps = 75/320 (23%)
Query: 484 KQQEPAAPPPP--EDVDLLGLEGSAMSNSFSPPAAPPTNSELLSDLFGGGGAAGPTQAGQ 541
+ Q P AP P ED++L+ E P++ P S + DL G T+A
Sbjct: 581 RSQPPLAPGKPNHEDLNLIQQER---------PSSLPDLSGSIDDLPTG------TEATL 625
Query: 542 SGVEDVFHPSGPASTQSTPRRSATSTSASPTLR-VGEGATFDPFGAP-------SKP-SG 592
S + QS P +S S ASP L + G + P G+P S P S
Sbjct: 626 SSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISP 685
Query: 593 QDLLGSFL------NTSSASSDPFLQPT-------------RSPSPTVHASSTPAVNIQP 633
+ GS + + S +SS P L + R+P + ++ P
Sbjct: 686 ASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSP 745
Query: 634 DVSGGWDWHAKPGGFGMGSKSAATSPTGSSHGTPTHQSKPQTLDPFADLGTLGSSSFASK 693
S G HA F + S P S +G + S+P S S
Sbjct: 746 HPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAY-----------SGVPSA 794
Query: 694 PTTPTGLGGGFPPLSSPQKASP-QPMGGGWQQGGAYNWQQPQPKPQPSMPHSSPQNRP-- 750
+ G G G + P QP G P MP + QNRP
Sbjct: 795 SYSGPGPGMGISANNQMHGQGPSQPCGA---------------VPLGRMPSAGMQNRPFP 839
Query: 751 -NYNVSFSAMPGGQNERGKG 769
N + + PG + G G
Sbjct: 840 GNMSSMTPSSPGMSQQGGPG 859
Score = 31.2 bits (69), Expect = 4.6
Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 6/139 (4%)
Query: 484 KQQEPAAPPPPEDVDLLGLEGSAMSNSFSPPAAPPTNSELLSDLFGGGGAAGPTQAGQSG 543
K+Q PP P + L + S + A P + + + G P Q G+S
Sbjct: 1102 KKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSS 1161
Query: 544 VEDVFHPSGPASTQSTPRRSATSTSASPTLRVGEGATF-DPFGAPSKPSGQDLLGSFLNT 602
V P S S P+R+ S +P +G + D G +D G +
Sbjct: 1162 TISVHDPFSDVSDSSFPKRN----SMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGG-MRK 1216
Query: 603 SSASSDPFLQPTRSPSPTV 621
SS+PF+ + P+ ++
Sbjct: 1217 VPGSSEPFMTQGQMPNSSM 1235
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 53.9 bits (128), Expect = 7e-07
Identities = 76/323 (23%), Positives = 95/323 (29%), Gaps = 72/323 (22%)
Query: 449 VNQESEQSDDELLTLSSPHGNA--NGDKPHGVKKPSKKQQ--------EPAAPPPPEDVD 498
+N++ Q + L +P G + G+KP G P K Q +P PPPP
Sbjct: 19 LNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPG--- 75
Query: 499 LLGLEGSAMSNSFSPPAAPPTNSELLSDLFGGGGAAGPTQAGQSGVEDVFHPSGPASTQS 558
P PP + S G GP G G + P P Q
Sbjct: 76 -------------KPQGPPPQGDKSRSPRSPPGKPQGPPPQG--GNQPQGPPPPPGKPQG 120
Query: 559 TPRRSATSTSASPTLRVGEGATFDPFGAPSKPSGQDLLGSFLNTSSASSDPFLQPTRSPS 618
P + P P KP G G S P P +
Sbjct: 121 PPPQGGNRPQGPPP--------------PGKPQGPPPQGD------KSRSPRSPPGKPQG 160
Query: 619 PTVHASSTPAVNIQPDVSGGWDWHAKPGGFGMGSKSAATSPTGSSHGTPTHQSKPQTLDP 678
P + P P G P G G K P G G P K ++
Sbjct: 161 PPPQGGNQPQ---GPPPPPGKPQGPPPQG---GKKPQGPPPPGKPQGPPPQGDKSRS--- 211
Query: 679 FADLGTLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMGGGWQQGGAYNWQQPQPKPQ 738
S S KP P GG P P PQ G QGG +PQ P
Sbjct: 212 --------SQSPPGKPQGPPPQGGNQPQGPPPPPGKPQ---GPPPQGG----NKPQGPPP 256
Query: 739 PSMPHSSPQNRPNYNVSFSAMPG 761
P P P + + S + PG
Sbjct: 257 PGKPQGPPAQGGSKSQSARSPPG 279
Score = 34.7 bits (78), Expect = 0.42
Identities = 52/245 (21%), Positives = 67/245 (27%), Gaps = 46/245 (18%)
Query: 531 GGAAGPTQAGQSGVEDVFHPSGPASTQSTPRRSATSTSASPTLRVGEGATFDPFGAPSKP 590
G GP+ G G + P P Q P + P P KP
Sbjct: 34 GNPQGPSPQG--GNKPQGPPPPPGKPQGPPPQGGNKPQGPPP--------------PGKP 77
Query: 591 SGQDLLGSFLNTSSASSDPFLQPTRSPSPTVHASSTPAVNIQPDVSGGWDWHAKPGGFGM 650
G G S P P + P + P P G P G
Sbjct: 78 QGPPPQGD------KSRSPRSPPGKPQGPPPQGGNQPQ---GPPPPPGKPQGPPPQG--- 125
Query: 651 GSKSAATSPTGSSHGTPTHQSKPQTLDPFADLGTLGSSSFASKPTTPTGLGGGFPPLSSP 710
G++ P G G P K ++ P +P G G PP
Sbjct: 126 GNRPQGPPPPGKPQGPPPQGDKSRS------------------PRSPPGKPQGPPPQGGN 167
Query: 711 QKASPQPMGGGWQQGGAYNWQQPQPKPQPSMPHSSPQNRPNYNVSFSAMPGGQNERGKGS 770
Q P P G Q ++PQ P P P P S S Q +G
Sbjct: 168 QPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGG 227
Query: 771 SNLEG 775
+ +G
Sbjct: 228 NQPQG 232
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 53.5 bits (127), Expect = 9e-07
Identities = 82/342 (23%), Positives = 117/342 (34%), Gaps = 48/342 (14%)
Query: 453 SEQSDDELLTLSSPHGNANGDKPHGVKKPSKKQQEPAAPPPPEDVDLLGLEG---SAMSN 509
S+ S + + + P G PH + S + PP +G++G AM+
Sbjct: 455 SQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAG 514
Query: 510 SFSPPAAPPTNSE------LLSDLFGGGGAAGPTQAGQSGV--EDVFHPSGPASTQSTPR 561
P ++ L+ +G G +G Q GQ + P P Q P
Sbjct: 515 MQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPS 574
Query: 562 RSATSTSASPTL-RVGEGATFDPFGAPSKPSGQDLLGSFLNTSSASSDPFLQPTRSPSPT 620
+S + + G G P AP KP+ +DL + + SS P L + PT
Sbjct: 575 QSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDL--NLIQQERPSSLPDLSGSIDDLPT 632
Query: 621 -VHASSTPAVNIQPDVSGGWDWHAKPGGFGMGSKSAATSPTGSSHGTPTHQSKPQTLDPF 679
A+ + AV+ S D + A SP S H +P S P P
Sbjct: 633 GTEATLSSAVSASGSTSSQGD-----------QSNPAQSPF-SPHASPHLSSIPGGPSPS 680
Query: 680 ADLGTLGSSSFASKPTTPTGLGGGFPPLSSPQKAS-----------PQPMGGGWQQGGAY 728
+GS+ S P +P + G P P S P P G+ G
Sbjct: 681 PVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQR 740
Query: 729 NWQQPQPKPQPSMPHSSPQNRPNYNVSFSAMPGGQNERGKGS 770
N Q Q PQ + P SP PGGQ G S
Sbjct: 741 NPQMAQYGPQQTGPSMSPH----------PSPGGQMHAGISS 772
Score = 41.6 bits (96), Expect = 0.003
Identities = 60/217 (27%), Positives = 83/217 (38%), Gaps = 40/217 (18%)
Query: 529 GGGGAAGPTQAGQSGVEDVFHPSGPASTQSTPRRSATSTSASPTLRVGEGATFDPFGAPS 588
GGG GP G + + S Q ++ + A+PTL +PS
Sbjct: 317 GGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLN-------QLLTSPS 369
Query: 589 KPSGQDLLGSFLNTSSASSDPFLQPTRSPSPTVHASSTPAVNIQPDVSGGWDWHAKPG-G 647
P + GS+ SS S+ P P P+ S A +GG A G G
Sbjct: 370 -PMMRSYGGSYPEYSSPSAPP-------PPPSQPQSQAAAAGA---AAGGQQAAAGMGLG 418
Query: 648 FGMGSKSAATSPTGSSHGTPTHQS-KPQTLDPFADLGTLGSSSFASKPTTPTGL------ 700
MG++ AA SP ++ +H + P T P T+G S P P +
Sbjct: 419 KDMGAQYAAASPAWAAAQQRSHPAMSPGTPGP-----TMGRSQ--GSPMDPMVMKRPQLY 471
Query: 701 GGGFPPLSSPQKASPQPMGGGWQQGGAYNWQQPQPKP 737
G G P S PQ++SP P GG+Y PQ P
Sbjct: 472 GMGSNPHSQPQQSSPYP-------GGSYGPPGPQRYP 501
Score = 39.3 bits (90), Expect = 0.017
Identities = 76/320 (23%), Positives = 108/320 (33%), Gaps = 75/320 (23%)
Query: 484 KQQEPAAPPPP--EDVDLLGLEGSAMSNSFSPPAAPPTNSELLSDLFGGGGAAGPTQAGQ 541
+ Q P AP P ED++L+ E P++ P S + DL G T+A
Sbjct: 594 RSQPPLAPGKPNHEDLNLIQQER---------PSSLPDLSGSIDDLPTG------TEATL 638
Query: 542 SGVEDVFHPSGPASTQSTPRRSATSTSASPTLR-VGEGATFDPFGAP-------SKP-SG 592
S + QS P +S S ASP L + G + P G+P S P S
Sbjct: 639 SSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISP 698
Query: 593 QDLLGSFL------NTSSASSDPFLQPT-------------RSPSPTVHASSTPAVNIQP 633
+ GS + + S +SS P L + R+P + ++ P
Sbjct: 699 ASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSP 758
Query: 634 DVSGGWDWHAKPGGFGMGSKSAATSPTGSSHGTPTHQSKPQTLDPFADLGTLGSSSFASK 693
S G HA F + S P S +G + S+P S S
Sbjct: 759 HPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAY-----------SGVPSA 807
Query: 694 PTTPTGLGGGFPPLSSPQKASP-QPMGGGWQQGGAYNWQQPQPKPQPSMPHSSPQNRP-- 750
+ G G G + P QP G P MP + QNRP
Sbjct: 808 SYSGPGPGMGISANNQMHGQGPSQPCGA---------------VPLGRMPSAGMQNRPFP 852
Query: 751 -NYNVSFSAMPGGQNERGKG 769
N + + PG + G G
Sbjct: 853 GNMSSMTPSSPGMSQQGGPG 872
Score = 32.0 bits (71), Expect = 2.7
Identities = 78/363 (21%), Positives = 112/363 (30%), Gaps = 76/363 (20%)
Query: 470 ANGDKPHGVKKPSKKQQEPAAPPPPEDVDLLGLEGSAMSNSF--------SPPAAPPTNS 521
A G G ++ + + Q P+ P ++ L S M S+ SP A PP S
Sbjct: 336 AAGSAAGGFQRFAGQNQHPSGATPT--LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPS 393
Query: 522 ELLSDLFGGGGAAGPTQAG-------QSGVEDVFHPSGPASTQSTPRRSATSTSASPTLR 574
+ S G AAG QA G + A+ Q + + + PT+
Sbjct: 394 QPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMG 453
Query: 575 VGEGATFDP--------FGAPSKPSGQDLLGS-FLNTSSASSDPFLQPTRSPSPTVHASS 625
+G+ DP +G S P Q S + S P P T A +
Sbjct: 454 RSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMA 513
Query: 626 TPAVNIQPDVSGGWDWH----AKPGGFGM----GSKSAATSPTGSSHGTPTH-------- 669
Q D SG W P +G G P S P H
Sbjct: 514 GMQYPQQQD-SGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYL 572
Query: 670 -QSKPQTLDPFADLGTLGSSSFASKPTTP-------------------TGLGGGFPPLSS 709
Q P D+ G + + P P L G L +
Sbjct: 573 PSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPT 632
Query: 710 PQKASPQPMGGGWQQGGAYNWQ--QPQPKPQPSMPHSSPQNRPNYNVSFSAMPGGQNERG 767
+A+ + G+ + Q Q P P PH+SP S++PGG +
Sbjct: 633 GTEAT---LSSAVSASGSTSSQGDQSNPAQSPFSPHASPH--------LSSIPGGPSPSP 681
Query: 768 KGS 770
GS
Sbjct: 682 VGS 684
Score = 31.2 bits (69), Expect = 4.6
Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 6/139 (4%)
Query: 484 KQQEPAAPPPPEDVDLLGLEGSAMSNSFSPPAAPPTNSELLSDLFGGGGAAGPTQAGQSG 543
K+Q PP P + L + S + A P + + + G P Q G+S
Sbjct: 1115 KKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSS 1174
Query: 544 VEDVFHPSGPASTQSTPRRSATSTSASPTLRVGEGATF-DPFGAPSKPSGQDLLGSFLNT 602
V P S S P+R+ S +P +G + D G +D G +
Sbjct: 1175 TISVHDPFSDVSDSSFPKRN----SMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGG-MRK 1229
Query: 603 SSASSDPFLQPTRSPSPTV 621
SS+PF+ + P+ ++
Sbjct: 1230 VPGSSEPFMTQGQMPNSSM 1248
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 51.6 bits (122), Expect = 3e-06
Identities = 81/321 (25%), Positives = 116/321 (36%), Gaps = 97/321 (30%)
Query: 450 NQESEQSDDELLTLSSPHGNANGDKPHGVKKPSKKQQEPAAPPPPEDVDLLGLEGSAMSN 509
NQ + L++ PH NA G PH +++ KK AP PP+
Sbjct: 602 NQPQAAAGSHQLSMGQPH-NAAGPSPHTLRRAVKKP----APAPPK-------------- 642
Query: 510 SFSPPAAPPTNSELLSDLFGGGGAAGPTQAGQSGVEDVFHPSGPASTQSTPRRSATSTSA 569
P PP GG ++G +Q HP P+ + P RS +
Sbjct: 643 ----PGNPPPGHP------GGQSSSGTSQ----------HP--PSLSPKPPTRSPSP--- 677
Query: 570 SPTLRVGEGATFDPFGAPSKPSGQDLLGSFLNTSSASSDPFLQPTRSPSPTVHASSTPAV 629
PT G+ P G PS PS + S+S P P P P +TP +
Sbjct: 678 -PTQHTGQ-----PPGQPSAPSQLSAPRRY----SSSLSPIQAPNHPP-PQPPTQATPLM 726
Query: 630 NIQPDVSGGWDWHAKPGGFGMGSKSAATSPTGSSHGTPTHQSKPQTLDPFADLGTLGSSS 689
+ +P+ G + A P G+ P+H + PQT P
Sbjct: 727 HTKPNSQGPPNPMALPSEHGLEQ--------------PSH-TPPQTPTP----------- 760
Query: 690 FASKPTTPTGLGGGFPPLSSPQKASPQPMGGGWQQGGAYNWQQPQPKPQPSMPHSSPQNR 749
P+TP LG P L +PQ + GG + + P+P+P P P+NR
Sbjct: 761 ----PSTPP-LGKQNPSLPAPQTLA----GGNPETAQPHAGTLPRPRPVP-----KPRNR 806
Query: 750 PNYNVSFSAMPGGQNERGKGS 770
P +V P G + G S
Sbjct: 807 P--SVPPPPQPPGVHSAGDSS 825
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 51.6 bits (122), Expect = 3e-06
Identities = 81/321 (25%), Positives = 116/321 (36%), Gaps = 97/321 (30%)
Query: 450 NQESEQSDDELLTLSSPHGNANGDKPHGVKKPSKKQQEPAAPPPPEDVDLLGLEGSAMSN 509
NQ + L++ PH NA G PH +++ KK AP PP+
Sbjct: 524 NQPQAAAGSHQLSMGQPH-NAAGPSPHTLRRAVKKP----APAPPK-------------- 564
Query: 510 SFSPPAAPPTNSELLSDLFGGGGAAGPTQAGQSGVEDVFHPSGPASTQSTPRRSATSTSA 569
P PP GG ++G +Q HP P+ + P RS +
Sbjct: 565 ----PGNPPPGHP------GGQSSSGTSQ----------HP--PSLSPKPPTRSPSP--- 599
Query: 570 SPTLRVGEGATFDPFGAPSKPSGQDLLGSFLNTSSASSDPFLQPTRSPSPTVHASSTPAV 629
PT G+ P G PS PS + S+S P P P P +TP +
Sbjct: 600 -PTQHTGQ-----PPGQPSAPSQLSAPRRY----SSSLSPIQAPNHPP-PQPPTQATPLM 648
Query: 630 NIQPDVSGGWDWHAKPGGFGMGSKSAATSPTGSSHGTPTHQSKPQTLDPFADLGTLGSSS 689
+ +P+ G + A P G+ P+H + PQT P
Sbjct: 649 HTKPNSQGPPNPMALPSEHGLEQ--------------PSH-TPPQTPTP----------- 682
Query: 690 FASKPTTPTGLGGGFPPLSSPQKASPQPMGGGWQQGGAYNWQQPQPKPQPSMPHSSPQNR 749
P+TP LG P L +PQ + GG + + P+P+P P P+NR
Sbjct: 683 ----PSTPP-LGKQNPSLPAPQTLA----GGNPETAQPHAGTLPRPRPVP-----KPRNR 728
Query: 750 PNYNVSFSAMPGGQNERGKGS 770
P +V P G + G S
Sbjct: 729 P--SVPPPPQPPGVHSAGDSS 747
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 51.2 bits (121), Expect = 4e-06
Identities = 87/335 (25%), Positives = 127/335 (37%), Gaps = 60/335 (17%)
Query: 464 SSPHGNANGDKPHGVKKPSKKQQEPAAPP-PPEDVDLLGLEGSAMSNSFSPPAAPPTNSE 522
+SP G + P G PS+ A+P P L GL +A S + +PP A PT +
Sbjct: 347 ASPTGKPSTASPTGT--PSR-----ASPTGSPSTASLTGLSSTA-SPTGTPPRASPTGTP 398
Query: 523 LLSDLFGGGGAAGPT-QAGQSGVEDVFHPSGPASTQSTPRRSATSTS--ASPT------L 573
+ L A PT ++ + + + P T++ PR S T T ASPT
Sbjct: 399 STASLTRKPPRASPTGMLSRTSITKMDSTASP--TRTPPRASPTGTPPRASPTGTPSRAS 456
Query: 574 RVGEGATFDPFGAPS--KPSGQDLLGSFLNTSSASSDPFLQPTRSPSPTVHASSTPAVNI 631
G +T P G+PS P+G S + S +S L T S + ST ++
Sbjct: 457 PTGTQSTASPTGSPSTASPTGSPSTASPTGSPSRAS---LTRTPSRASLTKMESTASITR 513
Query: 632 QPD-VSGGWDWH-AKPGG-----FGMGSKSAAT------------SPTGSSHGTPTHQSK 672
P S W A P G MGS S A +P+ +S TP+ S
Sbjct: 514 TPSRASPTWTPSTASPTGSPSTALAMGSPSRAALTRTPSRASLTRTPSRASLTTPSRASL 573
Query: 673 PQTLDPFADLGTLGSSSFASKP--TTPTGLGGGF--------------PPLSSPQKASPQ 716
+T S+S P T+PTG+ PP +SP + P+
Sbjct: 574 TRTPSTVLLTRMPPSASPTGMPSRTSPTGMPSSALLTKMDSTASITRTPPRASPTETPPR 633
Query: 717 PMGGGWQQGGAYNWQQPQPKPQPSMPHSSPQNRPN 751
G + P+ P + P +SP P+
Sbjct: 634 ASPTGTPPRASPTGTPPRASPTGTPPRASPTGTPS 668
Score = 47.0 bits (110), Expect = 8e-05
Identities = 64/225 (28%), Positives = 79/225 (35%), Gaps = 45/225 (20%)
Query: 505 SAMSNSFSPPAAPPTNSELLSDLFGGGGAAGPTQAGQSGVEDVFHPSGPASTQSTPRRSA 564
S S S +PP A T + + G A PT G P+G ST S +
Sbjct: 327 STASISRTPPRASITRTPSRASPTGKPSTASPT-----GTPSRASPTGSPSTASL---TG 378
Query: 565 TSTSASPTLRVGEGATFDPFGAPS------KPSGQDLLGSFLNTSSASSDPFLQPTRSPS 618
S++ASPT G P G PS KP G TS D PTR+P
Sbjct: 379 LSSTASPT---GTPPRASPTGTPSTASLTRKPPRASPTGMLSRTSITKMDSTASPTRTP- 434
Query: 619 PTVHASSTPAVNIQPDVSGGWDWHAKPGGFGMGSKSAATSPTGSSHGTPTHQS---KPQT 675
P + TP A P G + T T S G+P+ S P T
Sbjct: 435 PRASPTGTPP-------------RASPTGTPSRASPTGTQSTASPTGSPSTASPTGSPST 481
Query: 676 LDPFADLGTLGSSSFASKPTTP-----TGLGGGFPPLSSPQKASP 715
P GS S AS TP T + +P +ASP
Sbjct: 482 ASP------TGSPSRASLTRTPSRASLTKMESTASITRTPSRASP 520
Score = 43.5 bits (101), Expect = 9e-04
Identities = 69/324 (21%), Positives = 101/324 (31%), Gaps = 58/324 (17%)
Query: 446 AALVNQESEQSDDELLTLSSPHGNANGDKPHGVKKPSKKQQEPAA------PPPPEDVDL 499
A+L +S S L+ +SP G P G + P+ PP +
Sbjct: 200 ASLTKMDSTASITRTLSRASPTGTPPRASPTGSPPRASLSMMPSTALLIRTPPRASPTGM 259
Query: 500 LGLEGSAMSNSFS--------PPAAPPTNSELLSDLFGGGGAAG-------PTQAGQSGV 544
L +S + P A PT + + L A + G
Sbjct: 260 LSRTSLTKMDSTASITRTPSRPSTASPTGTPSRASLSMTPSTASLMRMLPRASPTGMLSR 319
Query: 545 EDVFHPSGPASTQSTPRRSATSTSASPTLRVGEGATFDPFGAPSK--PSGQDLLGSFLNT 602
+ AS TP R++ + + S G+ +T P G PS+ P+G S
Sbjct: 320 TSLTKMDSTASISRTPPRASITRTPSRASPTGKPSTASPTGTPSRASPTGSPSTASLTGL 379
Query: 603 SSASSDPFLQPTRSPSPTVHASSTPAVNIQPDVSGGWDWHAKPGGFGMGSKSAATSPTGS 662
SS +S P SP+ T ST ++ +P A P G + T S
Sbjct: 380 SSTASPTGTPPRASPTGT---PSTASLTRKPP-------RASPTGMLSRTSITKMDSTAS 429
Query: 663 SHGTPTHQSKPQTLDPFADLGTLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMGGGW 722
TP S PTG P +P +ASP
Sbjct: 430 PTRTPPRAS-------------------------PTGTPPRASPTGTPSRASPTGTQSTA 464
Query: 723 QQGGAYNWQQPQPKPQPSMPHSSP 746
G+ + P P + P SP
Sbjct: 465 SPTGSPSTASPTGSPSTASPTGSP 488
Score = 37.0 bits (84), Expect = 0.084
Identities = 69/302 (22%), Positives = 102/302 (33%), Gaps = 67/302 (22%)
Query: 505 SAMSNSFSPPAAPPTNSELLSDLFGGGGAAGPTQAGQSGVEDVFHPSGPASTQSTPRRSA 564
S S + +PP A T + + L P +A +G+ P+G ST S + +
Sbjct: 153 SRASLTRTPPRASLTMTPSTASL-----TRTPPRASPTGMPSRTSPTGMPSTASLTKMDS 207
Query: 565 TST------SASPTLRVGEGATFDPFGAPSK---------------PSGQDLLGSFLNTS 603
T++ ASPT G P G+P + P G TS
Sbjct: 208 TASITRTLSRASPT---GTPPRASPTGSPPRASLSMMPSTALLIRTPPRASPTGMLSRTS 264
Query: 604 SASSDPFLQPTRSPSPTVHASST-----PAVNIQPDVSGGWDWHAKPGGFGMGSKSAATS 658
D TR+PS AS T ++++ P + + GM S+++ T
Sbjct: 265 LTKMDSTASITRTPSRPSTASPTGTPSRASLSMTPSTASLMRMLPRASPTGMLSRTSLTK 324
Query: 659 -----------PTGSSHGTPTHQS---KPQTLDPFADLGTLGSSSFASKPTTP--TGLGG 702
P S TP+ S KP T P GT +S P+T TGL
Sbjct: 325 MDSTASISRTPPRASITRTPSRASPTGKPSTASP---TGTPSRASPTGSPSTASLTGLSS 381
Query: 703 GFPPLSSPQKASP--------------QPMGGGWQQGGAYNWQQPQPKPQPSMPHSSPQN 748
P +P +ASP + G + P + P +SP
Sbjct: 382 TASPTGTPPRASPTGTPSTASLTRKPPRASPTGMLSRTSITKMDSTASPTRTPPRASPTG 441
Query: 749 RP 750
P
Sbjct: 442 TP 443
>gi|7662228 synaptosomal-associated protein, 91kDa homolog [Homo
sapiens]
Length = 907
Score = 50.8 bits (120), Expect = 6e-06
Identities = 83/317 (26%), Positives = 124/317 (39%), Gaps = 52/317 (16%)
Query: 487 EPAAPPPPEDVDLLGLEGSAMSNSFSPPAAPPTNSELLSDLFGGGGAAGPTQA------- 539
E AA P P+ + L + +S A+P S L +DL A P+ A
Sbjct: 573 EVAAAPKPDAAPSIDLFSTDAFSSPPQGASPVPESSLTADLLSVDAFAAPSPATTASPAK 632
Query: 540 -GQSGVEDVFHPS-GPASTQSTP-RRSATSTSASPTLRVGEGATF-DPFGAPSKPSGQDL 595
SGV D+F + G ++++ P ++A+S+SAS L G G +F P +P P+ +L
Sbjct: 633 VDSSGVIDLFGDAFGSSASEPQPASQAASSSSASADLLAGFGGSFMAPSPSPVTPAQNNL 692
Query: 596 L--------GSFLNTSSASS-DP--------FLQPTRSPSPTVHASSTPAVNIQPDVSGG 638
L G+ +TSS+SS DP L PT +P+ P + P +
Sbjct: 693 LQPNFEAAFGTTPSTSSSSSFDPSVFDGLGDLLMPTMAPA----GQPAPVSMVPPSPA-- 746
Query: 639 WDWHAKPGGFGMGSKSAATSPTGSSHGTPTHQSKPQTLDPFADLGTLGSSSFASKPTTPT 698
A G S+ S G+ + T K + G +++ K P
Sbjct: 747 ---MAASKALGSDLDSSLASLVGNLGISGTTTKKGDLQWNAGEKKLTGGANWQPK-VAPA 802
Query: 699 GLGGGFPPLSSPQKASP-----QPMGGGWQQG--GAYNWQQPQPKPQPSMPH-----SSP 746
G PP + Q A P P+ G G GA P P MP + P
Sbjct: 803 TWSAGVPPSAPLQGAVPPTSSVPPVAGAPSVGQPGAGFGMPPAGTGMPMMPQQPVMFAQP 862
Query: 747 QNRPNYNVSFSAMPGGQ 763
RP + +A+PG Q
Sbjct: 863 MMRPPFGA--AAVPGTQ 877
Score = 38.9 bits (89), Expect = 0.022
Identities = 81/358 (22%), Positives = 116/358 (32%), Gaps = 74/358 (20%)
Query: 488 PAAPPPPEDV----DLLGLEGSA----------MSNSFSPPAAPPTNSELLSDLFGGGGA 533
PA PPP DLLG + A +S+ F+P PPT + ++
Sbjct: 367 PAPPPPAGGATAWGDLLGEDSLAALSSVPSEAQISDPFAPEPTPPTTTAEIATASASAST 426
Query: 534 AGPTQAGQSGVEDVFHPSGPASTQSTPRRS------ATSTSASPTLRVGEGATFDPFGAP 587
A + V D+F + AS P S AT T + L G DPF AP
Sbjct: 427 TTTVTAVTAEV-DLFGDAFAASPGEAPAASEGAAAPATPTPVAAALDACSGN--DPF-AP 482
Query: 588 SKPSGQDL--LGSFLNTSSASSDPFLQPTRSPSPTVHASS-----------------TPA 628
S+ S + L F +S P + PT S +P V A++ T A
Sbjct: 483 SEGSAEAAPELDLFAMKPPETSVPVVTPTASTAPPVPATAPSPAPAVAAAAAATTAATAA 542
Query: 629 VNIQPDVSGGWDWHAKPGGFGMGSKSAAT-----------SPTGSSHGTPTHQSKPQTLD 677
S A P G +T +P+ T S PQ
Sbjct: 543 ATTTTTTSAATATTAPPALDIFGDLFESTPEVAAAPKPDAAPSIDLFSTDAFSSPPQGAS 602
Query: 678 PF------ADLGTLGSSSFASKPTTPT-------GLGGGFPPLSSPQKASPQPMGGGWQQ 724
P ADL ++ + + S TT + G+ F + PQP
Sbjct: 603 PVPESSLTADLLSVDAFAAPSPATTASPAKVDSSGVIDLFGDAFGSSASEPQPASQAASS 662
Query: 725 GGA-------YNWQQPQPKPQPSMPHSSPQNRPNYNVSFSAMPGGQNERGKGSSNLEG 775
A + P P P P + +PN+ +F P + S +G
Sbjct: 663 SSASADLLAGFGGSFMAPSPSPVTPAQNNLLQPNFEAAFGTTPSTSSSSSFDPSVFDG 720
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 50.8 bits (120), Expect = 6e-06
Identities = 83/336 (24%), Positives = 102/336 (30%), Gaps = 69/336 (20%)
Query: 447 ALVNQESEQSDDELLTLSSPHGNANGDKPHGVKKPSKKQQEPAAPPPPEDVDLLGLEGSA 506
AL+ S QS +E ++ +G KP G ++P Q PPPP + +G
Sbjct: 9 ALLALSSAQSLNEDVSQEESPSVISG-KPEG-RRPQGGNQPQRTPPPPGKPEGRPPQGGN 66
Query: 507 MSNSFSP----PAAPPTNSELLSDLFGGGGAAGPTQAGQSGVEDVFHPSGPASTQSTPRR 562
S P P PP GG + GP + G + P G +Q P R
Sbjct: 67 QSQGPPPRPGKPEGPPPQ--------GGNQSQGPPP--RPGKPEGQPPQGGNQSQGPPPR 116
Query: 563 SATSTSASPTLRVGEGATFDPFGAPSKPSGQDLLGSFLNTSSASSDPFLQPTRSPSPTVH 622
P G + P P KP G G ++ P P
Sbjct: 117 PGKPEGPPPQ---GGNQSQGPPPRPGKPEGPPPQGG-------------NQSQGPPPR-- 158
Query: 623 ASSTPAVNIQPDVSGGWDWHAKPGGFGMGSKSAATSPTGS--SHGTPTHQSKPQTLDPFA 680
P P GG P G K P G S G P KP+ P
Sbjct: 159 ----PGKPEGPPPQGGNQSQGPPPHPG---KPEGPPPQGGNQSQGPPPRPGKPEGPPPQG 211
Query: 681 DLGTLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQ-----------------------P 717
+ G KP P GG P P PQ P
Sbjct: 212 GNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPP 271
Query: 718 MGGGWQQ---GGAYNWQQPQPKPQPSMPHSSPQNRP 750
GG QQ A Q P P PQ PH PQ +P
Sbjct: 272 PGGNPQQPLPPPAGKPQGPPPPPQGGRPHRPPQGQP 307
>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
Length = 753
Score = 50.4 bits (119), Expect = 7e-06
Identities = 73/322 (22%), Positives = 120/322 (37%), Gaps = 33/322 (10%)
Query: 433 DQKSEKSFCEEDHAALVNQESEQSDDELLTLSSPHGNANGDKPHGVKKPSKKQQEPAAPP 492
D + F EE+ + + E L+ S P + D+ + ++P
Sbjct: 212 DSSQDPDF-EENEFLYDDLDLEDIPQALVATSPPSHSHMEDEIFNQSSSTPTSTTSSSPI 270
Query: 493 PPEDVDLLGLEGSAMSNSFSPPAAPPTNSELL-SDLFGGGGAAGPTQAGQSGVEDVFHPS 551
PP + + ++ T+SE+ S G Q QS +PS
Sbjct: 271 PPSPANC-----TTENSEDDKKRGRSTDSEVSQSPAKNGSKPVHSNQHPQSPAVPPTYPS 325
Query: 552 GP----ASTQSTPRRSATSTSASPTLRVGEGATFDPFGAPSKPSGQDLLGSFLNTSSASS 607
GP ++ +TP + A+P +G A+ APS SG +
Sbjct: 326 GPPPAASALSTTPGNNGVPAPAAPPSALGPKAS----PAPSHNSG-------------TP 368
Query: 608 DPFLQPTRSPSPTVHASSTPAV-NIQPDVSGGWDWHAKPGGFGMGSKSAATSPTGSSHGT 666
P+ Q P+P+ +++ P ++QP SGG + GG S S+A G +G
Sbjct: 369 APYAQAVAPPAPSGPSTTQPRPPSVQP--SGGGGGGSGGGGSSSSSNSSAGGGAGKQNGA 426
Query: 667 PTHQSKPQTLDPFADLGTLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMG-GGWQQG 725
++ S L + G ++ +S+ P PP +S + ++ P G GG G
Sbjct: 427 TSYSSVVADSPAEVALSSSGGNNASSQALGPPSGPHNPPPSTSKEPSAAAPTGAGGVAPG 486
Query: 726 GAYNWQQPQ-PKPQPSMPHSSP 746
N P P P P SSP
Sbjct: 487 SGNNSGGPSLLVPLPVNPPSSP 508
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 49.3 bits (116), Expect = 2e-05
Identities = 74/307 (24%), Positives = 111/307 (36%), Gaps = 42/307 (13%)
Query: 465 SPHGNANGDKPHGVKKPSKKQQEPAAPPPPEDVDLLGLEGSAMSNSFSP------PAAP- 517
S +A+G P S P +P P + G AMS S+SP P +P
Sbjct: 1549 SAASDASGFSPGYSPAWSPTPGSPGSPGPSSPY--IPSPGGAMSPSYSPTSPAYEPRSPG 1606
Query: 518 ------PTNSELLSDLFGGGGAAGPTQAGQSGVEDVFHPSGPASTQSTPRRSATSTSASP 571
P+ S + PT S + P+ P+ + ++P S TS S SP
Sbjct: 1607 GYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1666
Query: 572 TLRVGEGATFDPFGAPSKPSGQDLLGSFLNTSSASSDPFLQPTRSPSPTVHASSTPAVN- 630
T P +P+ PS S+ TS + S P+ SP+ ++ ++P+ +
Sbjct: 1667 T---------SPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSYSPTSPSYSPTSPSYSP 1715
Query: 631 IQPDVSGGWDWHAKPGGFGMGSKSAATSPTGSSHGTPTHQSKPQTLDPFADLGTLGSSSF 690
P S P S + SPT S+ + P + + + +S
Sbjct: 1716 TSPSYS--------PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP 1767
Query: 691 ASKPTTP--TGLGGGFPPLS---SPQKASPQPMGGGWQQGG-AYNWQQPQPKP-QPSMPH 743
+ PT+P T + P S SP S P + Y Q P P PS
Sbjct: 1768 SYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSP 1827
Query: 744 SSPQNRP 750
SSP P
Sbjct: 1828 SSPSYSP 1834
Score = 42.4 bits (98), Expect = 0.002
Identities = 70/279 (25%), Positives = 100/279 (35%), Gaps = 26/279 (9%)
Query: 481 PSKKQQEPAAPPPPEDVDLLGLEGSAMSNSFSPPAAPPTNSELLSDLFGGGGAAGPTQAG 540
PS P+ P S S S+SP + P+ S + PT
Sbjct: 1704 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS--PSYSPTSPNYSPTSPNYTPTSPS 1761
Query: 541 QSGVEDVFHPSGPASTQSTPRRSATSTSASPTLRVGEGATFDPFGAPSKP--SGQDLLGS 598
S + P+ P T ++P S TS S SPT + P +PS P + Q +
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPT--SPSYSPTSPSYSPSSPRYTPQSPTYT 1819
Query: 599 FLNTSSASSDPFLQPTRSP-----SPTVHASSTPAVNIQPDVSGGWDWHAKPGGFGMGSK 653
+ S + S P PT SP SP+ SS P S P K
Sbjct: 1820 PSSPSYSPSSPSYSPT-SPKYTPTSPSYSPSSPEYTPTSPKYS-----PTSPKYSPTSPK 1873
Query: 654 SAATSPTGSSHGTPTHQSKPQTLDPFADLGTLGSSSFASKPTTPTGLGGGFPPLSSPQKA 713
+ TSPT S TP + T P + + T S ++ PT+PT + P S
Sbjct: 1874 YSPTSPT-YSPTTPKYSPTSPTYSPTSPVYTPTSPKYS--PTSPT-----YSPTSPKYSP 1925
Query: 714 SPQPMGGGWQQGGAYNWQQPQPKP-QPSMPHSSPQNRPN 751
+ +G Y+ P P P+ +SP P+
Sbjct: 1926 TSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPD 1964
>gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]
Length = 987
Score = 49.3 bits (116), Expect = 2e-05
Identities = 82/314 (26%), Positives = 111/314 (35%), Gaps = 54/314 (17%)
Query: 427 ASLCWQDQKSEKSFCEEDHAALVNQESEQSDDELLTLSSPHGNANGDKPHGVKKPS---- 482
ASL W +Q E + D A+ E+ + T + P A P + PS
Sbjct: 277 ASLQWFNQALED---KSDAASNSVTETPPTTQPSFTFTLPAA-ATASPPTSLLAPSTNPL 332
Query: 483 -----KKQQEPAAPPPPEDVDLLGLEGSAMSNSFSPPAAPPTNSELLSDLFGGGGAAGPT 537
K Q P+ PP PE G+A + + SPP P LL L G +GP
Sbjct: 333 LESLKKMQTPPSLPPCPESA------GAATTEALSPPKTP----SLLPPL--GLSQSGPP 380
Query: 538 QAGQSGVEDVFHPSGPASTQSTPRR-SATSTSASPTLRVGEGATFDPFGAPSKPSGQDLL 596
S D P+ P AT T A PTL+ APS Q L
Sbjct: 381 GLLPSPSFDSKPPTTLLGLIPAPSMVPATDTKAPPTLQAETATKPQATSAPSPAPKQSFL 440
Query: 597 GSFLNTSSASSDPFLQPTRSPSPTVHASSTPAVNIQPDVSGGWDWHAKPGGFGMGSKSAA 656
NTS + SP A+S+ + +P + K G G A
Sbjct: 441 FGTQNTSPS------------SPAAPAASSASPMFKP-IFTAPPKSEKEGPTPPGPSVTA 487
Query: 657 TSPTGSSHGTPTHQSKPQTLDPFADLGTLGS----SSFASKPTTP-----------TGLG 701
T+P+ SS T T + P F+ +G S + F + TTP TGL
Sbjct: 488 TAPSSSSLPTTTSTTAPTFQPVFSSMGPPASVPLPAPFFKQTTTPATAPTTTAPLFTGLA 547
Query: 702 GGFPPLSSPQKASP 715
++ ASP
Sbjct: 548 SATSAVAPITSASP 561
Score = 41.6 bits (96), Expect = 0.003
Identities = 56/242 (23%), Positives = 86/242 (35%), Gaps = 47/242 (19%)
Query: 493 PPEDVDLLGLEGSAMSNSFSPPAAPPTNSELLSDLFGGGGAAGPTQAGQSGVEDVFHPS- 551
PP V L + +P AP T + L + L A P + + P+
Sbjct: 515 PPASVPL---PAPFFKQTTTPATAPTTTAPLFTGLASATSAVAPITSASPSTDSASKPAF 571
Query: 552 ----GPASTQSTPRRSATSTSASPTLRVG----EGATFDP-------FGAPSKPSGQDLL 596
S+ S ++T+T+AS G A+F P FG P L
Sbjct: 572 GFGINSVSSSSVSTTTSTATAASQPFLFGAPQASAASFTPAMGSIFQFGKPPA-----LP 626
Query: 597 GSFLNTSSASSDPFLQPTRSPSPTVH--------ASSTPAVNIQPDVSGGWDWHAKPGGF 648
+ T+ + S P PT + S A+S PA + QP ++ + F
Sbjct: 627 TTTTVTTFSQSLPTAVPTATSSSAADFSGFGSTLATSAPATSSQPTLTFS---NTSTPTF 683
Query: 649 GMGSKSAATSPT------------GSSHGTPTHQSKPQTLDPFADLGTLGSSSFASKPTT 696
+ S+A SP G++ G P +KP F T G+S+ + T
Sbjct: 684 NIPFGSSAKSPLPSYPGANPQPAFGAAEGQPPGAAKPALTPSFGSSFTFGNSAAPAPATA 743
Query: 697 PT 698
PT
Sbjct: 744 PT 745
Score = 32.3 bits (72), Expect = 2.1
Identities = 78/356 (21%), Positives = 122/356 (34%), Gaps = 67/356 (18%)
Query: 437 EKSFCEEDHAALVNQESEQSDDELLTLSSPHGNANGDKPH-----GVKK------PSKKQ 485
E+ C ++ ++S E ++P N + G +K PS++
Sbjct: 192 EEELCHHSSSSTPLAADKESQGEKAADTTPRKKQNSNSQSTPGSSGQRKRKVQLLPSRRG 251
Query: 486 QEPAAPPPP--------EDVDL----------LGLEGSAMSNSFSPPAAPPTNSELLSDL 527
++ PPPP ED+DL LE + + S S PPT +
Sbjct: 252 EQLTLPPPPQLGYSITAEDLDLEKKASLQWFNQALEDKSDAASNSVTETPPTTQPSFTFT 311
Query: 528 FGGGGAAGPTQAGQSGVEDVFHPSGPASTQSTPRRSATSTSASPTLRVGEGATFDPFGAP 587
A P + + PS +S ++ T S P AT + P
Sbjct: 312 LPAAATASPPTS-------LLAPSTNPLLESL-KKMQTPPSLPPCPESAGAATTEALSPP 363
Query: 588 SKPSGQDLLGSFLNTSSASSDPFLQPT---RSPSPTVHASSTPAVNIQPDVSGGWDWHAK 644
PS LG S S P L P+ S PT PA ++ P D A
Sbjct: 364 KTPSLLPPLG-----LSQSGPPGLLPSPSFDSKPPTTLLGLIPAPSMVP----ATDTKAP 414
Query: 645 PGGFGMGSKSAATSPTGSSHGTPTHQSKPQTLDPFADLGTLGSSSFASKPTTPTGLGGGF 704
P AT P +S +P P+ F T SS A ++ + + F
Sbjct: 415 P----TLQAETATKPQATSAPSPA----PKQSFLFGTQNTSPSSPAAPAASSASPM---F 463
Query: 705 PPL-SSPQKASPQPMGGGWQQGGAYNWQQPQPKPQPSMPHSSPQNRPNYNVSFSAM 759
P+ ++P K+ + G G + P S+P ++ P + FS+M
Sbjct: 464 KPIFTAPPKSEKE---GPTPPGPSVTATAPS---SSSLPTTTSTTAPTFQPVFSSM 513
>gi|39995080 hypothetical protein LOC79567 [Homo sapiens]
Length = 1219
Score = 48.9 bits (115), Expect = 2e-05
Identities = 70/271 (25%), Positives = 98/271 (36%), Gaps = 34/271 (12%)
Query: 513 PPAAPPTNSELLSDLFGGGGAAGPTQAGQSGVEDVFHPS---------GPASTQSTPRRS 563
PPA P +S S L G T S D H S GP T + S
Sbjct: 495 PPALDPGHSATSSTLGTTGSVPTSTDPAPSAHLDSVHKSTDSGPSELPGPTHTTTGSTYS 554
Query: 564 A---TSTSASPTLRVGEGATFDPFGAPSKPSGQDL-LGSFLNTSSASSDPFLQPTRSPSP 619
A T ++ SP G+T P + +G L + + T+++ + PT + +
Sbjct: 555 AITTTHSAPSPLTHTTTGSTHKPIISTLTTTGPTLNIIGPVQTTTSPTHTMPSPTHTTAS 614
Query: 620 TVHASSTPA---VNIQPDVSGGWDWHAKPGGFGMGSKSAATSPTGSSHGTPTHQSKPQTL 676
H S++P + S P GMG ATSPT + +PTH + L
Sbjct: 615 PTHTSTSPTHTPTSPTHKTSMSPPTTTSPTPSGMGLVQTATSPTHPT-TSPTHPTTSPIL 673
Query: 677 -----DPFADLGTLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMGGGWQQGGAYNWQ 731
+L TL S S S PT P G P S P+ + Q +
Sbjct: 674 INVSPSTSLELATLSSPSKHSDPTLP---GTDSLPCS-------PPVSNSYTQADPMAPR 723
Query: 732 QPQPKPQPS--MPHSSPQNRPNYNVSFSAMP 760
P P P S P +SP P+ + S P
Sbjct: 724 TPHPSPAHSSRKPLTSPAPDPSESTVQSLSP 754
Score = 42.0 bits (97), Expect = 0.003
Identities = 58/255 (22%), Positives = 98/255 (38%), Gaps = 29/255 (11%)
Query: 462 TLSSPHGNANGDKPHGVKKPSKKQQEPAAPPPPEDVDLLGLEGSAMSNSFSPPA------ 515
T + P +A+ D H P+ P P G SA++ + S P+
Sbjct: 517 TSTDPAPSAHLDSVH-----KSTDSGPSELPGPTHTTT-GSTYSAITTTHSAPSPLTHTT 570
Query: 516 APPTNSELLSDLFGGG---GAAGPTQAGQSGVEDVFHPSGPASTQSTPRRSATSTSASPT 572
T+ ++S L G GP Q S + PS P T ++P ++TS + +PT
Sbjct: 571 TGSTHKPIISTLTTTGPTLNIIGPVQTTTSPTHTM--PS-PTHTTASPTHTSTSPTHTPT 627
Query: 573 LRVGEGATFDPFGAPSKPSGQDLLGSFLNTSSASSDPFLQPTRSP-----SPTVHAS--- 624
+ + P PSG L+ + + + ++ P PT SP SP+
Sbjct: 628 SPTHKTSMSPPTTTSPTPSGMGLVQTATSPTHPTTSP-THPTTSPILINVSPSTSLELAT 686
Query: 625 -STPAVNIQPDVSGGWDWHAKPGGFGMGSKSAATSPTGSSHGTPTHQSKPQTLDPFADLG 683
S+P+ + P + G P +++ +P + H +P H S+ P D
Sbjct: 687 LSSPSKHSDPTLPGTDSLPCSPPVSNSYTQADPMAPR-TPHPSPAHSSRKPLTSPAPDPS 745
Query: 684 TLGSSSFASKPTTPT 698
S + P+ PT
Sbjct: 746 ESTVQSLSPTPSPPT 760
>gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]
Length = 984
Score = 47.4 bits (111), Expect = 6e-05
Identities = 83/314 (26%), Positives = 108/314 (34%), Gaps = 54/314 (17%)
Query: 427 ASLCWQDQKSEKSFCEEDHAALVNQESEQSDDELLTLSSPHGNANGDKPHGVKKPS---- 482
ASL W +Q E + D A+ E+ T + P A P + PS
Sbjct: 277 ASLQWFNQALED---KSDAASNSVTETPPITQPSFTFTLPAA-APASPPTSLLAPSTNPL 332
Query: 483 -----KKQQEPAAPPPPEDVDLLGLEGSAMSNSFSPPAAPPTNSELLSDLFGGGGAAGPT 537
K Q P+ PP PE G+A + + SPP P LL L G +GP
Sbjct: 333 LESLKKMQTPPSLPPCPESA------GAATTEALSPPKTP----SLLPPL--GLSQSGPP 380
Query: 538 QAGQSGVEDVFHPSGPASTQSTPRR-SATSTSASPTLRVGEGATFDPFGAPSKPSGQDLL 596
S D P+ P AT T A PTL+ APS Q L
Sbjct: 381 GLLPSPSFDSKPPTTLLGLIPAPSMVPATDTKAPPTLQAETATKPQATSAPSPAPKQSFL 440
Query: 597 GSFLNTSSASSDPFLQPTRSPSPTVHASSTPAVNIQPDVSGGWDWHAKPGGFGMGSKSAA 656
NTS +S P S +P + P P K G G A
Sbjct: 441 FGTQNTSPSSP---AAPAASSAPPMF---KPIFTAPPK-------SEKEGPTPPGPSVTA 487
Query: 657 TSPTGSSHGTPTHQSKPQTLDPFADLGTLGS----SSFASKPTTP-----------TGLG 701
T+P+ SS T T + P F+ +G S + F + TTP TGL
Sbjct: 488 TAPSSSSLPTTTSTTAPTFQPVFSSMGPPASVPLPAPFFKQTTTPATAPTTTAPLFTGLA 547
Query: 702 GGFPPLSSPQKASP 715
++ ASP
Sbjct: 548 SATSAVAPITSASP 561
Score = 38.5 bits (88), Expect = 0.029
Identities = 52/236 (22%), Positives = 85/236 (36%), Gaps = 37/236 (15%)
Query: 493 PPEDVDLLGLEGSAMSNSFSPPAAPPTNSELLSDLFGGGGAAGPTQAGQSGVEDVFHPS- 551
PP V L + +P AP T + L + L A P + + P+
Sbjct: 515 PPASVPL---PAPFFKQTTTPATAPTTTAPLFTGLASATSAVAPITSASPSTDSASKPAF 571
Query: 552 ----GPASTQSTPRRSATSTSASPTLRVG----EGATFDP-------FGAPSKPSGQDLL 596
S+ S ++T+T+AS G A+F P FG P +
Sbjct: 572 GFGINSVSSSSVSTTTSTATAASQPFLFGAPQASAASFTPAMGSIFQFGKPPALPTTTTV 631
Query: 597 GSF---LNTSSASSDPFLQPTRSPSPTVHASSTPAVNIQPDVSGGWDWHAKPGGFGMGSK 653
+F L+T+ ++ S + A+S PA + QP ++ + F +
Sbjct: 632 TTFSQSLHTAVPTATSSSAADFSGFGSTLATSAPATSSQPTLTFS---NTSTPTFNIPFG 688
Query: 654 SAATSPT------------GSSHGTPTHQSKPQTLDPFADLGTLGSSSFASKPTTP 697
S+A SP G++ G P +KP F T G+S+ + TP
Sbjct: 689 SSAKSPLPSYPGANPQPAFGAAEGQPPGAAKPALAPSFGSSFTFGNSAAPAAAPTP 744
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,436,203
Number of Sequences: 37866
Number of extensions: 2452258
Number of successful extensions: 10807
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 596
Number of HSP's that attempted gapping in prelim test: 8964
Number of HSP's gapped (non-prelim): 2020
length of query: 913
length of database: 18,247,518
effective HSP length: 111
effective length of query: 802
effective length of database: 14,044,392
effective search space: 11263602384
effective search space used: 11263602384
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.