CNOT2 35727

Name: CNOT2	Sequence: fasta or formatted (540aa)		NCBI GI: 7657385
Description: CCR4-NOT transcription complex, subunit 2		Referenced in: RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.4 24 2 C cysteine 0.6 3 1 D aspartate 5.2 28 2 E glutamate 3.9 21 2 F phenylalanine 4.3 23 2 G glycine 8.1 44 2 H histidine 2.4 13 1 I isoleucine 3.1 17 2 K lysine 3.9 21 2 L leucine 8.1 44 2 M methionine 4.3 23 2 N asparagine 7.6 41 3 P proline 8.0 43 2 Q glutamine 5.0 27 2 R arginine 5.2 28 2 S serine 11.1 60 3 T threonine 6.9 37 2 V valine 3.7 20 1 W tryptophan 0.7 4 1 Y tyrosine 3.5 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CCR4-NOT transcription complex, subunit 2 CNOT3 0.032 CCR4-NOT transcription complex, subunit 3 MED1 0.021 mediator complex subunit 1 BCL9 0.016 B-cell CLL/lymphoma 9 MUC12 0.014 PREDICTED: mucin 12 MED15 0.012 mediator complex subunit 15 isoform b BCL9L 0.012 B-cell CLL/lymphoma 9-like MED15 0.011 mediator complex subunit 15 isoform a CLINT1 0.010 epsin 4 UMODL1 0.010 uromodulin-like 1 isoform 2 precursor MAML2 0.010 mastermind-like 2 XRN1 0.010 5'-3' exoribonuclease 1 isoform b XRN1 0.010 5'-3' exoribonuclease 1 isoform a LOC100292631 0.009 PREDICTED: hypothetical protein LOC100290201 0.009 PREDICTED: hypothetical protein XP_002347929 MUC6 0.009 mucin 6, gastric ZFHX3 0.009 AT-binding transcription factor 1 RPRD2 0.009 Regulation of nuclear pre-mRNA domain containing 2 ... FLRT2 0.009 fibronectin leucine rich transmembrane protein 2 [Hom... ACAN 0.009 aggrecan isoform 2 precursor MUC16 0.008 mucin 16 ROR1 0.008 receptor tyrosine kinase-like orphan receptor 1 iso... DSPP 0.008 dentin sialophosphoprotein preproprotein TOX 0.008 thymus high mobility group box protein TOX NUPL1 0.008 nucleoporin like 1 isoform b POU6F2 0.008 POU domain, class 6, transcription factor 2 NCOA3 0.007 nuclear receptor coactivator 3 isoform a NCOA3 0.007 nuclear receptor coactivator 3 isoform b BRD3 0.007 bromodomain containing protein 3 SRRM2 0.007 splicing coactivator subunit SRm300 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.